Mercurial > repos > nml > pangolin
diff test-data/lineage_report.tsv @ 3:24c005390360 draft
"planemo upload for repository https://github.com/hCoV-2019/pangolin commit 8a1337fc6ef2b8b3f2f82ebdf3ee8dbb6e3ff1ed"
| author | nml |
|---|---|
| date | Mon, 11 May 2020 19:23:31 -0400 |
| parents | b91b3923656e |
| children |
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--- a/test-data/lineage_report.tsv Mon May 04 16:40:54 2020 -0400 +++ b/test-data/lineage_report.tsv Mon May 11 19:23:31 2020 -0400 @@ -1,7 +1,7 @@ taxon lineage SH-alrt UFbootstrap lineages_version status note -Japan/DP0779/2020|EPI_ISL_416626||Japan|unknown||2020-02-17 B 100 100 2020-04-27 passed_qc -USA/NY-NYUMC7/2020|EPI_ISL_418192||USA|New_York|Manhattan|2020-03-16 B.1 100 100 2020-04-27 passed_qc -This_seq_has_no_seq None 0 0 2020-04-27 fail seq_len:0 -This_seq_is_too_short None 0 0 2020-04-27 fail seq_len:2997 -This_seq_has_lots_of_Ns None 0 0 2020-04-27 fail N_content:0.98 -This_seq_is_literally_just_N None 0 0 2020-04-27 fail N_content:1.0 +Japan/DP0779/2020|EPI_ISL_416626||Japan|unknown||2020-02-17 B 100 100 2020-05-07 passed_qc +USA/NY-NYUMC7/2020|EPI_ISL_418192||USA|New_York|Manhattan|2020-03-16 B.1 100 100 2020-05-07 passed_qc +This_seq_has_no_seq None 0 0 2020-05-07 fail seq_len:0 +This_seq_is_too_short None 0 0 2020-05-07 fail seq_len:2997 +This_seq_has_lots_of_Ns None 0 0 2020-05-07 fail N_content:0.98 +This_seq_is_literally_just_N None 0 0 2020-05-07 fail N_content:1.0