comparison plasmidSPAdes.xml @ 1:a415d510332b draft default tip

Changing version

0:27b90e43e2d8

<tool id="plasmidspades" name="plasmidspades" version="1.0">
  <description>genome assembler for plasmids</description>
  <requirements>
    <requirement type="package" version="3.8.0">spades</requirement>
  </requirements>
  <command interpreter="perl">spades.pl 
    $out_contigs 
    $out_contig_stats 
    $out_scaffolds 

  <help>
**What it does**

SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies. See http://bioinf.spbau.ru/en/spades for more details on SPAdes.

This wrapper runs SPAdes 3.8, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 

**License**

SPAdes is developed by and copyrighted to Saint-Petersburg Academic University, and is released under GPLv2.

1:a415d510332b

<tool id="plasmidspades" name="plasmidspades" version="1.1">
  <description>genome assembler for plasmids</description>
  <requirements>
    <requirement type="package" version="3.9.0">spades</requirement>
  </requirements>
  <command interpreter="perl">spades.pl 
    $out_contigs 
    $out_contig_stats 
    $out_scaffolds 

  <help>
**What it does**

SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies. See http://bioinf.spbau.ru/en/spades for more details on SPAdes.

This wrapper runs SPAdes 3.9, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 

**License**

SPAdes is developed by and copyrighted to Saint-Petersburg Academic University, and is released under GPLv2.