# HG changeset patch
# User nml
# Date 1478554278 18000
# Node ID a415d510332b229492b78c7612a5365a2eef1b78
# Parent  27b90e43e2d838791d4d434508100d7edeefd16b
Changing version

diff -r 27b90e43e2d8 -r a415d510332b CHANGE
diff -r 27b90e43e2d8 -r a415d510332b plasmidSPAdes.xml
--- a/plasmidSPAdes.xml	Mon Jun 06 15:13:06 2016 -0400
+++ b/plasmidSPAdes.xml	Mon Nov 07 16:31:18 2016 -0500
@@ -1,7 +1,7 @@
-<tool id="plasmidspades" name="plasmidspades" version="1.0">
+<tool id="plasmidspades" name="plasmidspades" version="1.1">
   <description>genome assembler for plasmids</description>
   <requirements>
-    <requirement type="package" version="3.8.0">spades</requirement>
+    <requirement type="package" version="3.9.0">spades</requirement>
   </requirements>
   <command interpreter="perl">spades.pl 
     $out_contigs 
@@ -217,7 +217,7 @@
 
 SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies. See http://bioinf.spbau.ru/en/spades for more details on SPAdes.
 
-This wrapper runs SPAdes 3.8, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 
+This wrapper runs SPAdes 3.9, collects the output, and throws away all the temporary files. It also produces a tab file with contig names, length and coverage. 
 
 **License**
 
diff -r 27b90e43e2d8 -r a415d510332b tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Jun 06 15:13:06 2016 -0400
+++ b/tool_dependencies.xml	Mon Nov 07 16:31:18 2016 -0500
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="spades" version="3.8.0">
-        <repository changeset_revision="c9eab59c0bc2" name="package_spades_3_8_0" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu" />
+    <package name="spades" version="3.9.0">
+        <repository changeset_revision="d8c8c3dc8f9a" name="package_spades_3_9_0" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>