Mercurial > repos > nml > positions2snv_alignment

diff positions2snv_alignment.xml @ 1:1cf81ca17e9d draft default tip

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"planemo upload for repository https://github.com/phac-nml/snvphyl-galaxy commit 57067916cb7b9c5b65c1da59d4bbb846c3e3af2f"
author nml
date Tue, 23 Jun 2020 10:26:59 -0400
parents e2cec726fa79
children
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--- a/positions2snv_alignment.xml	Tue Aug 27 12:32:15 2019 -0400
+++ b/positions2snv_alignment.xml	Tue Jun 23 10:26:59 2020 -0400
@@ -1,8 +1,9 @@
-<tool id="positions2snv_alignment" name="Positions to SNV alignment" version ="1.8.2">
+<tool id="positions2snv_alignment" name="Positions to SNV alignment" version ="@VERSION@+galaxy1">
   <description>Create a SNV-only alignment from the SNVPhyl positions table.</description>
-  <requirements>
-    <requirement type="package" version="1.8.2">snvphyl-tools</requirement>
-  </requirements>
+  <macros>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="requirements"/>
   <command detect_errors="exit_code"><![CDATA[
 	positions2snv_alignment.pl -i $snv_table -o $output -f $out_format $keep_all 
         #if $reference_name:
@@ -70,7 +71,5 @@
 Creates a SNV-only alignment from the SNVPhyl SNV positions table.
 
   </help>
-
-  <citations>
-  </citations>
+  <expand macro="citations"/>
 </tool>