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comparison dnds.xml @ 7:dcd43b402eb3 draft

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planemo upload for repository https://github.com/phac-nml/quasitools commit ce3f1b19e7e110ff47365c672bc6fa17cce0a314
author nml
date Fri, 23 Nov 2018 15:43:16 -0500
parents b69e898b8109
children 9def47f3c1e4
comparison
equal deleted inserted replaced
6:9fb9fed71486 7:dcd43b402eb3
1 <tool id="dnds" name="dNdS Report" version="0.4.2"> 1 <tool id="dnds" name="dNdS Report" version="0.5.1">
2 <description>Calculate the dN/dS value for each region in a bed file</description> 2 <description>Calculate the dN/dS value for each region in a bed file</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.2">quasitools</requirement> 4 <requirement type="package" version="0.5.1">quasitools</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 7
8 quasitools dnds $csv_file $ref_file $offset -o output.csv 8 quasitools dnds $csv_file $ref_file $offset -o output.csv
9 9
35 35
36 Determines the dNdS ratio for each codon variant in a supplied csv file (codon variants). 36 Determines the dNdS ratio for each codon variant in a supplied csv file (codon variants).
37 37
38 ]]></help> 38 ]]></help>
39 <citations> 39 <citations>
40 <citation type="bibtex">
41 @misc{GitHubquasitoolsdnds,
42 title = {quasitools dnds},
43 publisher = {phac-nml},
44 journal = {GitHub repository},
45 url = {https://github.com/phac-nml/quasitools},
46 }
47 </citation>
40 </citations> 48 </citations>
41 </tool> 49 </tool>