Mercurial > repos > nml > sistr_cmd

comparison test-data/sistr-results-13-1101.tab @ 3:5c8ff92e38a9 draft

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Update to 1.0.2
author nml
date Wed, 14 Jun 2017 14:36:59 -0400
parents ebee10be4297
children
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2:13632190a0ff 3:5c8ff92e38a9
1 cgmlst_ST cgmlst_distance cgmlst_genome_match cgmlst_matching_alleles cgmlst_subspecies fasta_filepath genome h1 h2 mash_distance mash_genome mash_match mash_serovar mash_subspecies o_antigen qc_messages qc_status serogroup serovar serovar_antigen serovar_cgmlst 1 cgmlst_ST cgmlst_distance cgmlst_genome_match cgmlst_matching_alleles cgmlst_subspecies fasta_filepath genome h1 h2 mash_distance mash_genome mash_match mash_serovar mash_subspecies o_antigen qc_messages qc_status serogroup serovar serovar_antigen serovar_cgmlst
2 2375035975 0.069696969697 SRR1097806 307 enterica /mnt/ssd240/work/repos/galaxy_tools/tools/sistr_cmd/test-data/13-1101-Paratyphi_B.fasta 13-1101-Paratyphi_B b 1,2 0.00178577 72308 929 Paratyphi B var. Java enterica 1,4,[5],12 PASS B Paratyphi B var. Java Paratyphi B|Paratyphi B var. Java Paratyphi B var. Java 2 1567171959 0.00303030303030305 SAL_HA5013AA 329 enterica /mnt/ssd240/work/repos/galaxy_tools/tools/sistr_cmd/test-data/13-1101-Paratyphi_B.fasta 13-1101-Paratyphi_B b 1,2 0.00178577 72308 929 Paratyphi B var. Java enterica 1,4,[5],12 PASS B Paratyphi B var. Java Paratyphi B|Paratyphi B var. Java Paratyphi B var. Java