view snv_matrix.xml @ 1:4d3e3d7aa0c4 draft default tip

"planemo upload for repository https://github.com/phac-nml/snvphyl-galaxy commit 57067916cb7b9c5b65c1da59d4bbb846c3e3af2f"

<tool id="snvmatrix" name="SNV Matrix" version ="@VERSION@+galaxy1">
  <description>Create SNV matrix from Phylip file</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="requirements"/>
  <command detect_errors="exit_code">
	snv_matrix.pl   $phylip
	-o $out
  </command>
  <inputs>
    <param name="phylip" type="data" label="Phylip file" format="phylip"/>
  </inputs>
  <outputs>
    <data format="tabular" name="out"/>
  </outputs>
  <tests>
    <test>
      <param name="phylip" value="snvalign-13.phy"/>
      <output name="out" file="snvalign-13.phy.out"/>
    </test>
  </tests>

  <help>
What it does
============

Create SNV matrix from Phylip file format


Usage
=====

**Parameters**
  - Phylip file: Phylogenetic file (.ph, .phy)

  </help>
  <expand macro="citations"/>
</tool>