Mercurial > repos > nml > spatyper

view test-data/output.txt @ 0:52d69f74b19e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/spatyper commit a211c27b9f7386f8e43419ec22b88403498da26e
author nml
date Mon, 20 Mar 2023 20:16:56 +0000
parents
children
line wrap: on
line source

Start the identification of repeats in Spa protein:
+ Repeats fasta file provided:  ~/tools/spaTyper/test-data/sparepeats.fasta
+ Check or download repeats types file in folder:  ~/planemo/bin
	A previous download created spatypes.txt on: 2023-03-15 17:43:58

-----------------
Results:
Sequence name	Repeats	Type
AJ829762.1 Staphylococcus aureus subsp. aureus partial spa gene for protein A	99-20-69-31-70-13-17-16-16-16-16	t11215
-----------------