annotate tool_dependencies.xml @ 2:e59fdf6145db draft default tip

planemo upload commit 158a919b3605123af3b7c8d720a776fa62b9cba6

<?xml version="1.0"?>
<tool_dependency>
    <package name="vfdb" version="08-07-2014">
        <install version="1.0">
            <actions_group>
                <actions>
                    <action type="download_by_url" sha256sum="eae59df6f7aad698da5e43322c58a28c25dfe91dd656cd2ee12ea330db6aa6bb">https://github.com/mariamiskander/VirulenceFactorsDB/archive/master.zip</action>
                    <action type="make_directory">$INSTALL_DIR/vfdb</action>
                    <action type="move_directory_files">
                        <source_directory>vfdb</source_directory>
                        <destination_directory>$INSTALL_DIR/vfdb</destination_directory>
                    </action>
                    <action type="set_environment">
                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                        <environment_variable name="VF_PATH" action="set_to">$INSTALL_DIR</environment_variable>
                    </action>
                    <action type="shell_command">ls -lrt</action>
                    <action type="shell_command">echo $INSTALL_DIR</action>
                    <action type="shell_command">echo $PATH</action>
                </actions>
            </actions_group>
        </install>
    </package>
</tool_dependency>