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view test-data/test1-summary.tsv @ 10:7573a6c11c4d draft

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"planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit 69b939934ff9f503c7314cdbe6e3cb08e5f84db5"
author nml
date Wed, 27 Nov 2019 08:59:23 -0500
parents 61a3e97aa865
children 141afacabcfa
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Isolate ID	Quality Module	Genotype	Predicted Phenotype	Plasmid	Scheme	Sequence Type	Genome Length	N50 value	Number of Contigs Greater Than Or Equal To 300 bp	Quality Module Feedback
16S-rc_gyrA-rc_beta-lactam.fsa	Failed	16S_rrsD (C1065T), blaIMP-42, gyrA (A67P)	spectinomycin, ampicillin, amoxicillin/clavulanic acid, cefoxitin, ceftriaxone, meropenem, ciprofloxacin I/R, nalidixic acid	None	-	-	5220	5220	1	Genome length is not within the acceptable length range [4000000,6000000] ; N50 value is not greater than the specified minimum value [10000]