# HG changeset patch # User nml # Date 1586042832 14400 # Node ID aeaa20b96ef2531b7464443d53a58397d201013b # Parent 5f43703968cf29eb110fa20c2b4870a70cf485e7 "planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit 014bea9d3a8d8bda2eebe4dde697b72c776ff158" diff -r 5f43703968cf -r aeaa20b96ef2 staramr_search.xml --- a/staramr_search.xml Wed Dec 18 16:14:07 2019 -0500 +++ b/staramr_search.xml Sat Apr 04 19:27:12 2020 -0400 @@ -1,4 +1,4 @@ - + Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes. 0.7.1 @@ -17,7 +17,7 @@ #set $named_genomes = $named_genomes + ' ' + $_named_genome #end for - #set $excel_proper_extension = '"{}.xlsx"'.format($excel) + #set $excel_proper_extension = '"results.xlsx"' ln -s "$excel" $excel_proper_extension && staramr search