Mercurial > repos > ntino > galaxy_to_biocompute_object

view jsonParse.xml @ 2:26da5281cbf8 draft

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author ntino
date Mon, 06 May 2019 20:20:36 -0400
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<tool id="Workflow_to_BCO" name="Convert Galaxy workflow to BCO" version="0.1.0">
  <description>Convert Galaxy workflow to BCO</description>
  <command interpreter="python">jsonParse.py $input $output </command>
  <inputs>
    <param format="json" name="input" type="data" label="Galaxy workflow file"/>
  </inputs>
  <outputs>
    <data format="json" name="output" type="data" label="Biological Compute Object" />
  </outputs>

  <tests>
    <test>
      <param name="input" value="Galaxy-Workflow-Metagenomics_Pipeline.json"/>
      <output name="out_file1" file="galaxyOut.json"/>
    </test>
  </tests>

  <help>
This tool converts a Galaxy workflow to a Biological Compute Object (BCO).
  </help>

</tool>