Mercurial > repos > nturaga > package_minfi_1_16_0

comparison tool_dependencies.xml @ 1:d0cee75b3e2e draft

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planemo upload for repository https://github.com/nitesh1989/tools-iuc/tree/methylation/tool_collections/methylation_toolkit/minfi commit fb90aafc93e5e63acfcdac4c27cfd865cdf06c5a-dirty
author nturaga
date Tue, 19 Apr 2016 11:58:53 -0400
parents f453b1c037bc
children 3c91920654d3
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0:f453b1c037bc 1:d0cee75b3e2e
3 <package name="libcurl" version="7.35"> 3 <package name="libcurl" version="7.35">
4 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="R" version="3.2.1"> 6 <package name="R" version="3.2.1">
7 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="r-getopt" version="1.20.0">
10 <repository changeset_revision="712cb82311a8" name="package_r_3_2_1_getopt_1_20_0" owner="bebatut" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 11 </package>
9 <package name="minfi" version="1.16.0"> 12 <package name="minfi" version="1.16.0">
10 <install version="1.0"> 13 <install version="1.0">
11 <actions> 14 <actions>
12 <action type="setup_r_environment"> 15 <action type="setup_r_environment">
71 <package>https://bioarchive.galaxyproject.org/plyr_1.8.3.tar.gz</package> 74 <package>https://bioarchive.galaxyproject.org/plyr_1.8.3.tar.gz</package>
72 <package>https://bioarchive.galaxyproject.org/reshape_0.8.5.tar.gz</package> 75 <package>https://bioarchive.galaxyproject.org/reshape_0.8.5.tar.gz</package>
73 <package>https://bioarchive.galaxyproject.org/quadprog_1.5-5.tar.gz</package> 76 <package>https://bioarchive.galaxyproject.org/quadprog_1.5-5.tar.gz</package>
74 <package>https://bioarchive.galaxyproject.org/GEOquery_2.35.7.tar.gz</package> 77 <package>https://bioarchive.galaxyproject.org/GEOquery_2.35.7.tar.gz</package>
75 <package>https://bioarchive.galaxyproject.org/minfi_1.16.0.tar.gz</package> 78 <package>https://bioarchive.galaxyproject.org/minfi_1.16.0.tar.gz</package>
76 <package>https://cran.r-project.org/src/contrib/getopt_1.20.0.tar.gz</package>
77 </action> 79 </action>
78 </actions> 80 </actions>
79 </install> 81 </install>
80 <readme> 82 <readme>
81 </readme> 83 </readme>