# HG changeset patch
# User nturaga
# Date 1461091863 14400
# Node ID c83b6496d7e1995ad23cdaf135d467d2b67ce30f
# Parent  0753bd9cb8a18659dde11b17d9502ec4eb654089
planemo upload for repository https://github.com/nitesh1989/tools-iuc/tree/methylation/tool_collections/methylation_toolkit/minfi commit cd2aa0df28d6d740d86c5aec560f51e74ef3510d-dirty

diff -r 0753bd9cb8a1 -r c83b6496d7e1 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Apr 19 14:44:05 2016 -0400
+++ b/tool_dependencies.xml	Tue Apr 19 14:51:03 2016 -0400
@@ -57,19 +57,19 @@
                 <package>https://bioarchive.galaxyproject.org/GenomicAlignments_1.6.0.tar.gz</package>
                 <package>https://bioarchive.galaxyproject.org/rtracklayer_1.30.0.tar.gz</package>
                 <package>https://bioarchive.galaxyproject.org/biomaRt_2.25.0.tar.gz</package>
-                <package>https://bioarchive.galaxyproject.org/GenomicFeatures_1.22.0.tar.gz</package>
+                <package>https://bioarchive.galaxyproject.org/GenomicFeatures_1.21.13.tar.gz</package>
                 <package>https://bioarchive.galaxyproject.org/bumphunter_1.10.0.tar.gz</package>
                 <!-- <package>https://bioarchive.galaxyproject.org/beanplot_1.2.tar.gz</package> -->
                 <!-- <package>https://bioarchive.galaxyproject.org/RColorBrewer_1.1-2.tar.gz</package> -->
                 <!-- <package>https://bioarchive.galaxyproject.org/nor1mix_1.2-1.tar.gz</package> -->
-                <package>https://bioarchive.galaxyproject.org/multtest_2.26.0.tar.gz</package>
-                <package>https://bioarchive.galaxyproject.org/siggenes_1.44.0.tar.gz</package>
-                <package>https://bioarchive.galaxyproject.org/preprocessCore_1.32.0.tar.gz</package>
+                <package>https://bioarchive.galaxyproject.org/multtest_2.25.2.tar.gz</package>
+                <package>https://bioarchive.galaxyproject.org/siggenes_1.43.0.tar.gz</package>
+                <package>https://bioarchive.galaxyproject.org/preprocessCore_1.31.0.tar.gz</package>
                 <!-- <package>https://bioarchive.galaxyproject.org/base64_1.1.tar.gz</package> -->
                 <package>https://bioarchive.galaxyproject.org/illuminaio_0.12.0.tar.gz</package>
                 <!-- <package>https://bioarchive.galaxyproject.org/mclust_5.0.2.tar.gz</package> -->
                 <package>https://bioarchive.galaxyproject.org/annotate_1.48.0.tar.gz</package>
-                <package>https://bioarchive.galaxyproject.org/genefilter_1.52.0.tar.gz</package>
+                <package>https://bioarchive.galaxyproject.org/genefilter_1.51.0.tar.gz</package>
                 <!-- <package>https://bioarchive.galaxyproject.org/Rcpp_0.12.1.tar.gz</package> -->
                 <!-- <package>https://bioarchive.galaxyproject.org/plyr_1.8.3.tar.gz</package> -->
                 <!-- <package>https://bioarchive.galaxyproject.org/reshape_0.8.5.tar.gz</package> -->