Mercurial > repos > nturaga > package_minfi_1_16_0
changeset 16:a5c03de9ede7 draft
planemo upload for repository https://github.com/nitesh1989/tools-iuc/tree/methylation/tool_collections/methylation_toolkit/minfi commit 4f055a2cf9a8ae7e9cc4d7982193c06df8df1fd1-dirty
| author | nturaga |
|---|---|
| date | Wed, 20 Apr 2016 16:29:49 -0400 |
| parents | a207166bbeb2 |
| children | 3c5dd2c0ecf1 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 72 insertions(+), 74 deletions(-) [+] |
line wrap: on
line diff
--- a/tool_dependencies.xml Tue Apr 19 17:23:47 2016 -0400 +++ b/tool_dependencies.xml Wed Apr 20 16:29:49 2016 -0400 @@ -1,24 +1,21 @@ <?xml version="1.0"?> <tool_dependency> - <package name="libcurl" version="7.35"> - <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="R" version="3.2.1"> - <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="r-getopt" version="1.20.0"> - <repository changeset_revision="712cb82311a8" name="package_r_3_2_1_getopt_1_20_0" owner="bebatut" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> - </package> - <package name="minfi" version="1.16.0"> - <install version="1.0"> - <actions> - <action type="setup_r_environment"> - <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu"> - <package name="libcurl" version="7.35" /> - </repository> - <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> - <package name="R" version="3.2.1" /> - </repository> + <package name="libcurl" version="7.35"> + <repository changeset_revision="f8230c44d76c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="http://gaius.bx.psu.edu:8008" /> + </package> + <package name="R" version="3.2.1"> + <repository changeset_revision="7289a736da57" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="http://gaius.bx.psu.edu:8008" /> + </package> + <package name="minfi" version="1.16.0"> + <install version="1.0"> + <actions> + <action type="setup_r_environment"> + <repository changeset_revision="f8230c44d76c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="http://gaius.bx.psu.edu:8008"> + <package name="libcurl" version="7.35" /> + </repository> + <repository changeset_revision="7289a736da57" name="package_r_3_2_1" owner="iuc" toolshed="http://gaius.bx.psu.edu:8008"> + <package name="R" version="3.2.1" /> + </repository> <package>https://bioconductor.org/packages/release/bioc/src/contrib/BiocGenerics_0.16.1.tar.gz</package> <package>https://bioarchive.galaxyproject.org/Biobase_2.29.1.tar.gz</package> <package>http://bioconductor.org/packages/release/bioc/src/contrib/S4Vectors_0.8.11.tar.gz</package> @@ -28,30 +25,30 @@ <package>https://bioarchive.galaxyproject.org/XVector_0.10.0.tar.gz</package> <package>https://bioconductor.org/packages/release/bioc/src/contrib/GenomicRanges_1.22.4.tar.gz</package> <package>https://bioarchive.galaxyproject.org/Biostrings_2.38.0.tar.gz</package> - 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