itsx: ITSx_db/HMMs/I.hmm annotate

annotate ITSx_db/HMMs/I.hmm @ 4:2986d8c4db11 draft

Uploaded

author	okorol
date	Thu, 04 Jun 2015 12:05:10 -0400
parents	f82c70f54bd7
children

rev	line source
0 f82c70f54bd7 Uploaded okorol parents: diff changeset	1 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	2 NAME 3_End_Phaeophyceae_58S_end_one_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	3 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	4 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	5 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	6 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	7 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	8 DATE Fri Jan 20 12:12:36 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	9 NSEQ 157
f82c70f54bd7 Uploaded okorol parents: diff changeset	10 EFFN 3.732391
f82c70f54bd7 Uploaded okorol parents: diff changeset	11 CKSUM 82106143
f82c70f54bd7 Uploaded okorol parents: diff changeset	12 STATS LOCAL MSV -6.9907 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	13 STATS LOCAL VITERBI -7.6013 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	14 STATS LOCAL FORWARD -3.9860 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	15 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	16 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	17 COMPO 1.91751 1.41520 1.11917 1.26019
f82c70f54bd7 Uploaded okorol parents: diff changeset	18 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	19 0.03429 4.08301 4.08301 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	20 1 3.57378 0.11461 3.61706 2.93034 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	21 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	22 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	23 2 3.03127 3.71067 0.10455 3.62844 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	24 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	25 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	26 3 3.57378 0.11461 3.61706 2.93034 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	27 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	28 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	29 4 3.21417 2.67481 3.25746 0.15969 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	30 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	31 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	32 5 3.21417 2.67481 3.25746 0.15969 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	33 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	34 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	35 6 3.57378 0.11461 3.61706 2.93034 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	36 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	37 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	38 7 3.57378 0.11461 3.61706 2.93034 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	39 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	40 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	41 8 3.03127 3.71067 0.10455 3.62844 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	42 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	43 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	44 9 3.03127 3.71067 0.10455 3.62844 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	45 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	46 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	47 10 3.03127 3.71067 0.10455 3.62844 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	48 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	49 0.04253 4.08301 3.69765 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	50 11 0.15619 3.32897 2.80495 3.03107 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	51 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	52 0.03457 4.07506 4.07506 1.46634 0.26236 0.85884 0.55105
f82c70f54bd7 Uploaded okorol parents: diff changeset	53 12 1.83744 2.35418 2.56143 0.40256 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	54 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	55 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	56 13 0.12671 3.50290 2.88107 3.41642 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	57 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	58 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	59 14 2.61652 1.41576 2.68268 0.48480 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	60 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	61 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	62 15 2.01308 1.45171 1.26036 1.05354 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	63 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	64 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	65 16 3.57378 0.11461 3.61706 2.93034 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	66 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	67 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	68 17 3.57378 0.11461 3.61706 2.93034 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	69 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	70 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	71 18 3.14605 2.49866 3.19205 0.18189 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	72 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	73 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	74 19 3.03127 3.71067 0.10455 3.62844 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	75 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	76 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	77 20 3.03127 3.71067 0.10455 3.62844 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	78 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	79 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	80 21 3.03127 3.71067 0.10455 3.62844 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	81 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	82 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	83 22 0.12671 3.50290 2.88107 3.41642 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	84 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	85 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	86 23 2.90108 3.65700 0.11528 3.57161 23 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	87 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	88 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	89 24 3.57378 0.11461 3.61706 2.93034 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	90 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	91 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	92 25 0.12671 3.50290 2.88107 3.41642 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	93 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	94 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	95 26 3.21417 2.67481 3.25746 0.15969 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	96 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	97 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	98 27 3.03127 3.71067 0.10455 3.62844 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	99 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	100 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	101 28 3.57378 0.11461 3.61706 2.93034 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	102 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	103 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	104 29 3.21417 2.67481 3.25746 0.15969 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	105 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	106 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	107 30 3.21417 2.67481 3.25746 0.15969 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	108 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	109 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	110 31 3.03127 3.71067 0.10455 3.62844 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	111 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	112 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	113 32 3.21417 2.67481 3.25746 0.15969 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	114 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	115 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	116 33 3.35782 0.16081 3.40896 2.51757 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	117 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	118 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	119 34 3.03127 3.71067 0.10455 3.62844 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	120 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	121 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	122 35 3.03127 3.71067 0.10455 3.62844 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	123 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	124 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	125 36 0.12671 3.50290 2.88107 3.41642 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	126 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	127 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	128 37 3.03127 3.71067 0.10455 3.62844 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	129 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	130 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	131 38 3.21417 2.67481 3.25746 0.15969 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	132 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	133 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	134 39 3.03127 3.71067 0.10455 3.62844 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	135 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	136 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	137 40 3.21417 2.67481 3.25746 0.15969 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	138 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	139 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	140 41 3.57378 0.11461 3.61706 2.93034 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	141 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	142 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	143 42 3.16360 2.54221 3.20887 0.17598 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	144 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	145 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	146 43 2.85217 3.63521 0.11976 3.54831 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	147 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	148 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	149 44 3.03385 2.24171 3.08462 0.22333 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	150 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	151 0.03429 4.08301 4.08301 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	152 45 2.90903 2.47911 3.09147 0.20307 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	153 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	154 0.01729 4.06601 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	155 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	156 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	157 NAME 3_End_Phaeophyceae_58S_end_two_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	158 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	159 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	160 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	161 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	162 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	163 DATE Sun Oct 9 00:13:57 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	164 NSEQ 4
f82c70f54bd7 Uploaded okorol parents: diff changeset	165 EFFN 3.082031
f82c70f54bd7 Uploaded okorol parents: diff changeset	166 CKSUM 3550826365
f82c70f54bd7 Uploaded okorol parents: diff changeset	167 STATS LOCAL MSV -8.1048 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	168 STATS LOCAL VITERBI -7.8658 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	169 STATS LOCAL FORWARD -3.8411 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	170 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	171 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	172 COMPO 1.71271 1.47634 0.90619 1.67615
f82c70f54bd7 Uploaded okorol parents: diff changeset	173 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	174 0.03860 3.96690 3.96690 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	175 1 3.34045 0.14183 3.39374 2.76103 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	176 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	177 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	178 2 2.89070 3.50572 0.12655 3.40205 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	179 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	180 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	181 3 3.34045 0.14183 3.39374 2.76103 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	182 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	183 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	184 4 3.00834 2.54393 3.05952 0.19218 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	185 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	186 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	187 5 3.34045 0.14183 3.39374 2.76103 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	188 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	189 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	190 6 3.34045 0.14183 3.39374 2.76103 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	191 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	192 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	193 7 3.34045 0.14183 3.39374 2.76103 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	194 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	196 8 2.89070 3.50572 0.12655 3.40205 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	197 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	199 9 2.89070 3.50572 0.12655 3.40205 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	200 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	202 10 2.89070 3.50572 0.12655 3.40205 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	203 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	205 11 0.15297 3.30004 2.74948 3.19422 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	206 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	207 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	209 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	210 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	211 13 0.15297 3.30004 2.74948 3.19422 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	212 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	213 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	214 14 3.00834 2.54393 3.05952 0.19218 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	215 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	216 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	217 15 2.89070 3.50572 0.12655 3.40205 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	218 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	219 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	220 16 3.34045 0.14183 3.39374 2.76103 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	221 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	222 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	223 17 3.34045 0.14183 3.39374 2.76103 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	224 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	225 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	226 18 3.00834 2.54393 3.05952 0.19218 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	227 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	228 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	229 19 2.89070 3.50572 0.12655 3.40205 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	230 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	231 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	232 20 2.89070 3.50572 0.12655 3.40205 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	233 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	234 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	235 21 2.89070 3.50572 0.12655 3.40205 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	236 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	237 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	238 22 0.15297 3.30004 2.74948 3.19422 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	239 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	240 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	242 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	243 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	244 24 3.34045 0.14183 3.39374 2.76103 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	245 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	246 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	247 25 0.15297 3.30004 2.74948 3.19422 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	248 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	249 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	250 26 3.00834 2.54393 3.05952 0.19218 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	251 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	252 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	253 27 2.89070 3.50572 0.12655 3.40205 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	254 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	255 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	256 28 3.34045 0.14183 3.39374 2.76103 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	257 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	258 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	259 29 3.00834 2.54393 3.05952 0.19218 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	260 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	261 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	262 30 3.00834 2.54393 3.05952 0.19218 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	263 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	264 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	265 31 2.89070 3.50572 0.12655 3.40205 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	266 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	267 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	268 32 3.00834 2.54393 3.05952 0.19218 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	269 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	270 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	271 33 3.34045 0.14183 3.39374 2.76103 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	272 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	273 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	274 34 2.89070 3.50572 0.12655 3.40205 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	275 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	276 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	277 35 2.89070 3.50572 0.12655 3.40205 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	278 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	279 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	280 36 2.89070 3.50572 0.12655 3.40205 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	281 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	282 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	283 37 2.89070 3.50572 0.12655 3.40205 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	284 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	285 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	286 38 0.15297 3.30004 2.74948 3.19422 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	287 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	288 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	289 39 2.89070 3.50572 0.12655 3.40205 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	290 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	291 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	292 40 2.89070 3.50572 0.12655 3.40205 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	293 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	294 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	295 41 0.15297 3.30004 2.74948 3.19422 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	296 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	297 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	298 42 2.89070 3.50572 0.12655 3.40205 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	299 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	300 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	301 43 2.89070 3.50572 0.12655 3.40205 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	302 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	303 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	304 44 0.15297 3.30004 2.74948 3.19422 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	305 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	306 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	307 45 2.89070 3.50572 0.12655 3.40205 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	308 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	309 0.01949 3.94778 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	310 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	311 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	312 NAME 2_5.8_Phaeophyceae_58S_start_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	313 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	314 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	315 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	316 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	317 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	318 DATE Sun Oct 9 00:07:52 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	319 NSEQ 172
f82c70f54bd7 Uploaded okorol parents: diff changeset	320 EFFN 3.414490
f82c70f54bd7 Uploaded okorol parents: diff changeset	321 CKSUM 3324807830
f82c70f54bd7 Uploaded okorol parents: diff changeset	322 STATS LOCAL MSV -7.5493 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	323 STATS LOCAL VITERBI -7.7980 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	324 STATS LOCAL FORWARD -4.1200 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	325 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	326 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	327 COMPO 1.23334 1.32585 1.45069 1.56687
f82c70f54bd7 Uploaded okorol parents: diff changeset	328 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	329 0.03627 4.02794 4.02794 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	330 1 0.13813 3.40921 2.82069 3.31363 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	331 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	332 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	333 2 0.13813 3.40921 2.82069 3.31363 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	334 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	335 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	336 3 0.13813 3.40921 2.82069 3.31363 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	337 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	338 0.03957 4.02794 3.86405 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	339 4 3.46006 0.12704 3.50837 2.84857 4 - -
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f82c70f54bd7 Uploaded okorol parents: diff changeset	342 5 3.11793 2.61377 3.16496 0.17402 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	343 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	378 17 0.13813 3.40921 2.82069 3.31363 17 - -
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f82c70f54bd7 Uploaded okorol parents: diff changeset	418 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	421 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	427 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	430 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	433 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	439 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	442 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	445 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	448 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	451 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	454 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	456 43 0.17679 2.96825 2.73119 3.08982 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	457 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	458 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	459 44 0.13813 3.40921 2.82069 3.31363 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	460 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	461 0.03627 4.02794 4.02794 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	463 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	464 0.01830 4.00996 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	465 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	466 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	467 NAME 4_LSU_Phaeophyceae_4_LSU_start_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	468 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	469 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	470 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	471 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	472 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	473 DATE Fri Jan 20 12:15:29 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	474 NSEQ 48
f82c70f54bd7 Uploaded okorol parents: diff changeset	475 EFFN 3.231445
f82c70f54bd7 Uploaded okorol parents: diff changeset	476 CKSUM 2699152105
f82c70f54bd7 Uploaded okorol parents: diff changeset	477 STATS LOCAL MSV -8.2524 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	478 STATS LOCAL VITERBI -7.5362 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	479 STATS LOCAL FORWARD -3.9900 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	480 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	481 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	482 COMPO 1.22159 1.33002 1.44966 1.57931
f82c70f54bd7 Uploaded okorol parents: diff changeset	483 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	484 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	498 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	534 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	620 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	621 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	622 NAME 1_SSU_Phaeophyceae_1_SSU_end_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	623 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	624 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	625 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	626 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	627 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	628 DATE Fri Jan 20 12:07:06 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	629 NSEQ 89
f82c70f54bd7 Uploaded okorol parents: diff changeset	630 EFFN 3.229401
f82c70f54bd7 Uploaded okorol parents: diff changeset	631 CKSUM 1632466499
f82c70f54bd7 Uploaded okorol parents: diff changeset	632 STATS LOCAL MSV -8.0048 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	633 STATS LOCAL VITERBI -7.6816 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	634 STATS LOCAL FORWARD -4.1101 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	635 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	636 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	637 COMPO 1.27187 1.62651 1.24657 1.44566
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f82c70f54bd7 Uploaded okorol parents: diff changeset	639 0.03753 3.99441 3.99441 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	751 38 2.92625 3.55688 0.12059 3.45837 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	752 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	753 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	754 39 0.14597 3.34993 2.78218 3.24874 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	755 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	756 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	757 40 3.05809 2.57571 3.10741 0.18367 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	758 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	759 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	760 41 3.39812 0.13446 3.44905 2.80346 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	761 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	762 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	763 42 0.14597 3.34993 2.78218 3.24874 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	764 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	765 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	766 43 3.05809 2.57571 3.10741 0.18367 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	767 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	768 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	769 44 3.05809 2.57571 3.10741 0.18367 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	770 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	771 0.03753 3.99441 3.99441 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	772 45 0.14597 3.34993 2.78218 3.24874 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	773 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	774 0.01894 3.97582 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	775 //

Mercurial > repos > okorol > itsx

annotate ITSx_db/HMMs/I.hmm @ 4:2986d8c4db11 draft