0
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1 HMMER3/b [3.0 | March 2010]
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2 NAME 3_End_Synurophyceae_58S_end_one_long
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3 LENG 45
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4 ALPH DNA
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5 RF no
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6 CS no
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7 MAP yes
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8 DATE Thu Jan 19 22:10:37 2012
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9 NSEQ 114
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10 EFFN 3.336365
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11 CKSUM 556246054
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12 STATS LOCAL MSV -7.9476 0.71931
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13 STATS LOCAL VITERBI -7.6935 0.71931
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14 STATS LOCAL FORWARD -4.0189 0.71931
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15 HMM A C G T
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16 m->m m->i m->d i->m i->i d->m d->d
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17 COMPO 1.82422 1.38641 1.25673 1.19039
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18 1.38629 1.38629 1.38629 1.38629
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19 0.03679 4.01392 4.01392 1.46634 0.26236 0.00000 *
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20 1 3.43814 0.12961 3.48739 2.83266 1 - -
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21 1.38629 1.38629 1.38629 1.38629
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22 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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23 2 2.95057 3.59219 0.11668 3.49732 2 - -
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24 1.38629 1.38629 1.38629 1.38629
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25 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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26 3 3.43814 0.12961 3.48739 2.83266 3 - -
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27 1.38629 1.38629 1.38629 1.38629
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28 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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29 4 0.14132 3.38463 2.80476 3.28671 4 - -
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30 1.38629 1.38629 1.38629 1.38629
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31 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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32 5 3.09302 2.59795 3.14101 0.17797 5 - -
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33 1.38629 1.38629 1.38629 1.38629
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34 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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35 6 3.43814 0.12961 3.48739 2.83266 6 - -
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36 1.38629 1.38629 1.38629 1.38629
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37 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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38 7 3.09302 2.59795 3.14101 0.17797 7 - -
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39 1.38629 1.38629 1.38629 1.38629
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40 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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41 8 3.09302 2.59795 3.14101 0.17797 8 - -
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42 1.38629 1.38629 1.38629 1.38629
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|
43 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
44 9 2.95057 3.59219 0.11668 3.49732 9 - -
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|
45 1.38629 1.38629 1.38629 1.38629
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|
46 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
47 10 3.43814 0.12961 3.48739 2.83266 10 - -
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|
48 1.38629 1.38629 1.38629 1.38629
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|
49 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
50 11 0.14132 3.38463 2.80476 3.28671 11 - -
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|
51 1.38629 1.38629 1.38629 1.38629
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|
52 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
53 12 3.43814 0.12961 3.48739 2.83266 12 - -
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|
54 1.38629 1.38629 1.38629 1.38629
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|
55 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
56 13 3.09302 2.59795 3.14101 0.17797 13 - -
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57 1.38629 1.38629 1.38629 1.38629
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|
58 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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59 14 2.95057 3.59219 0.11668 3.49732 14 - -
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|
60 1.38629 1.38629 1.38629 1.38629
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|
61 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
62 15 3.43814 0.12961 3.48739 2.83266 15 - -
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|
63 1.38629 1.38629 1.38629 1.38629
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|
64 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
65 16 3.43814 0.12961 3.48739 2.83266 16 - -
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66 1.38629 1.38629 1.38629 1.38629
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|
67 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
68 17 3.09302 2.59795 3.14101 0.17797 17 - -
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|
69 1.38629 1.38629 1.38629 1.38629
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|
70 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
71 18 2.93904 0.27285 3.00266 1.99347 18 - -
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72 1.38629 1.38629 1.38629 1.38629
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|
73 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
74 19 2.95057 3.59219 0.11668 3.49732 19 - -
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75 1.38629 1.38629 1.38629 1.38629
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|
76 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
77 20 2.95057 3.59219 0.11668 3.49732 20 - -
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|
78 1.38629 1.38629 1.38629 1.38629
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|
79 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
80 21 3.43814 0.12961 3.48739 2.83266 21 - -
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|
81 1.38629 1.38629 1.38629 1.38629
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|
82 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
83 22 0.14132 3.38463 2.80476 3.28671 22 - -
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|
84 1.38629 1.38629 1.38629 1.38629
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|
85 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
86 23 2.95057 3.59219 0.11668 3.49732 23 - -
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|
87 1.38629 1.38629 1.38629 1.38629
|
|
88 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
89 24 3.09302 2.59795 3.14101 0.17797 24 - -
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|
90 1.38629 1.38629 1.38629 1.38629
|
|
91 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
92 25 0.14132 3.38463 2.80476 3.28671 25 - -
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|
93 1.38629 1.38629 1.38629 1.38629
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|
94 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
95 26 3.09302 2.59795 3.14101 0.17797 26 - -
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|
96 1.38629 1.38629 1.38629 1.38629
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|
97 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
98 27 2.95057 3.59219 0.11668 3.49732 27 - -
|
|
99 1.38629 1.38629 1.38629 1.38629
|
|
100 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
101 28 3.09302 2.59795 3.14101 0.17797 28 - -
|
|
102 1.38629 1.38629 1.38629 1.38629
|
|
103 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
104 29 3.43814 0.12961 3.48739 2.83266 29 - -
|
|
105 1.38629 1.38629 1.38629 1.38629
|
|
106 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
107 30 3.09302 2.59795 3.14101 0.17797 30 - -
|
|
108 1.38629 1.38629 1.38629 1.38629
|
|
109 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
110 31 2.95057 3.59219 0.11668 3.49732 31 - -
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|
111 1.38629 1.38629 1.38629 1.38629
|
|
112 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
113 32 3.09302 2.59795 3.14101 0.17797 32 - -
|
|
114 1.38629 1.38629 1.38629 1.38629
|
|
115 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
116 33 3.09302 2.59795 3.14101 0.17797 33 - -
|
|
117 1.38629 1.38629 1.38629 1.38629
|
|
118 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
119 34 2.95057 3.59219 0.11668 3.49732 34 - -
|
|
120 1.38629 1.38629 1.38629 1.38629
|
|
121 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
122 35 2.95057 3.59219 0.11668 3.49732 35 - -
|
|
123 1.38629 1.38629 1.38629 1.38629
|
|
124 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
125 36 0.14132 3.38463 2.80476 3.28671 36 - -
|
|
126 1.38629 1.38629 1.38629 1.38629
|
|
127 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
128 37 2.95057 3.59219 0.11668 3.49732 37 - -
|
|
129 1.38629 1.38629 1.38629 1.38629
|
|
130 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
131 38 3.09302 2.59795 3.14101 0.17797 38 - -
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|
132 1.38629 1.38629 1.38629 1.38629
|
|
133 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
134 39 2.95057 3.59219 0.11668 3.49732 39 - -
|
|
135 1.38629 1.38629 1.38629 1.38629
|
|
136 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
137 40 3.09302 2.59795 3.14101 0.17797 40 - -
|
|
138 1.38629 1.38629 1.38629 1.38629
|
|
139 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
140 41 3.43814 0.12961 3.48739 2.83266 41 - -
|
|
141 1.38629 1.38629 1.38629 1.38629
|
|
142 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
143 42 3.09302 2.59795 3.14101 0.17797 42 - -
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|
144 1.38629 1.38629 1.38629 1.38629
|
|
145 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
|
|
146 43 2.95057 3.59219 0.11668 3.49732 43 - -
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|
147 1.38629 1.38629 1.38629 1.38629
|
|
148 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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|
149 44 3.09302 2.59795 3.14101 0.17797 44 - -
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150 1.38629 1.38629 1.38629 1.38629
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|
151 0.03679 4.01392 4.01392 1.46634 0.26236 1.09861 0.40547
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152 45 0.14132 3.38463 2.80476 3.28671 45 - -
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153 1.38629 1.38629 1.38629 1.38629
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154 0.01857 3.99570 * 1.46634 0.26236 0.00000 *
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155 //
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156 HMMER3/b [3.0 | March 2010]
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157 NAME 3_End_Synurophyceae_58S_end_three_long
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158 LENG 45
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159 ALPH DNA
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160 RF no
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161 CS no
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162 MAP yes
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163 DATE Thu Jan 19 22:10:46 2012
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164 NSEQ 2
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165 EFFN 2.000000
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166 CKSUM 592956816
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167 STATS LOCAL MSV -7.3746 0.72844
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168 STATS LOCAL VITERBI -8.4013 0.72844
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169 STATS LOCAL FORWARD -3.5118 0.72844
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170 HMM A C G T
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171 m->m m->i m->d i->m i->i d->m d->d
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172 COMPO 1.66005 1.44051 1.32058 1.18390
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173 1.38629 1.38629 1.38629 1.38629
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174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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175 1 2.81865 0.23582 2.88868 2.35662 1 - -
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176 1.38629 1.38629 1.38629 1.38629
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177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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178 2 2.53331 3.02441 0.20344 2.88069 2 - -
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179 1.38629 1.38629 1.38629 1.38629
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180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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181 3 2.81865 0.23582 2.88868 2.35662 3 - -
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|
182 1.38629 1.38629 1.38629 1.38629
|
|
183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
184 4 0.23862 2.84929 2.43386 2.70756 4 - -
|
|
185 1.38629 1.38629 1.38629 1.38629
|
|
186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
187 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
188 1.38629 1.38629 1.38629 1.38629
|
|
189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
190 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
191 1.38629 1.38629 1.38629 1.38629
|
|
192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
193 7 2.57915 2.25909 2.64442 0.28946 7 - -
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194 1.38629 1.38629 1.38629 1.38629
|
|
195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
196 8 2.57915 2.25909 2.64442 0.28946 8 - -
|
|
197 1.38629 1.38629 1.38629 1.38629
|
|
198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
199 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
200 1.38629 1.38629 1.38629 1.38629
|
|
201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
202 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
203 1.38629 1.38629 1.38629 1.38629
|
|
204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
205 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
206 1.38629 1.38629 1.38629 1.38629
|
|
207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
208 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
209 1.38629 1.38629 1.38629 1.38629
|
|
210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
211 13 2.57915 2.25909 2.64442 0.28946 13 - -
|
|
212 1.38629 1.38629 1.38629 1.38629
|
|
213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
214 14 2.53331 3.02441 0.20344 2.88069 14 - -
|
|
215 1.38629 1.38629 1.38629 1.38629
|
|
216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
217 15 2.81865 0.23582 2.88868 2.35662 15 - -
|
|
218 1.38629 1.38629 1.38629 1.38629
|
|
219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
220 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
221 1.38629 1.38629 1.38629 1.38629
|
|
222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
223 17 2.57915 2.25909 2.64442 0.28946 17 - -
|
|
224 1.38629 1.38629 1.38629 1.38629
|
|
225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
226 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
227 1.38629 1.38629 1.38629 1.38629
|
|
228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
229 19 0.23862 2.84929 2.43386 2.70756 19 - -
|
|
230 1.38629 1.38629 1.38629 1.38629
|
|
231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
232 20 2.53331 3.02441 0.20344 2.88069 20 - -
|
|
233 1.38629 1.38629 1.38629 1.38629
|
|
234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
235 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
236 1.38629 1.38629 1.38629 1.38629
|
|
237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
238 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
239 1.38629 1.38629 1.38629 1.38629
|
|
240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
241 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
242 1.38629 1.38629 1.38629 1.38629
|
|
243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
244 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
245 1.38629 1.38629 1.38629 1.38629
|
|
246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
247 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
248 1.38629 1.38629 1.38629 1.38629
|
|
249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
250 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
251 1.38629 1.38629 1.38629 1.38629
|
|
252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
253 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
254 1.38629 1.38629 1.38629 1.38629
|
|
255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
256 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
257 1.38629 1.38629 1.38629 1.38629
|
|
258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
259 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
260 1.38629 1.38629 1.38629 1.38629
|
|
261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
262 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
263 1.38629 1.38629 1.38629 1.38629
|
|
264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
265 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
266 1.38629 1.38629 1.38629 1.38629
|
|
267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
268 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
269 1.38629 1.38629 1.38629 1.38629
|
|
270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
271 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
272 1.38629 1.38629 1.38629 1.38629
|
|
273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
274 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
275 1.38629 1.38629 1.38629 1.38629
|
|
276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
277 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
278 1.38629 1.38629 1.38629 1.38629
|
|
279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
280 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
281 1.38629 1.38629 1.38629 1.38629
|
|
282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
283 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
284 1.38629 1.38629 1.38629 1.38629
|
|
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
286 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
287 1.38629 1.38629 1.38629 1.38629
|
|
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
289 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
290 1.38629 1.38629 1.38629 1.38629
|
|
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
292 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
293 1.38629 1.38629 1.38629 1.38629
|
|
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
295 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
296 1.38629 1.38629 1.38629 1.38629
|
|
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
298 42 2.57915 2.25909 2.64442 0.28946 42 - -
|
|
299 1.38629 1.38629 1.38629 1.38629
|
|
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
301 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
302 1.38629 1.38629 1.38629 1.38629
|
|
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
304 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
305 1.38629 1.38629 1.38629 1.38629
|
|
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
307 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
308 1.38629 1.38629 1.38629 1.38629
|
|
309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
310 //
|
|
311 HMMER3/b [3.0 | March 2010]
|
|
312 NAME 3_End_Synurophyceae_58S_end_two_long
|
|
313 LENG 45
|
|
314 ALPH DNA
|
|
315 RF no
|
|
316 CS no
|
|
317 MAP yes
|
|
318 DATE Mon Jan 16 13:02:58 2012
|
|
319 NSEQ 2
|
|
320 EFFN 2.000000
|
|
321 CKSUM 593723470
|
|
322 STATS LOCAL MSV -7.4782 0.72836
|
|
323 STATS LOCAL VITERBI -8.3072 0.72836
|
|
324 STATS LOCAL FORWARD -3.3799 0.72836
|
|
325 HMM A C G T
|
|
326 m->m m->i m->d i->m i->i d->m d->d
|
|
327 COMPO 1.65518 1.50641 1.26646 1.18610
|
|
328 1.38629 1.38629 1.38629 1.38629
|
|
329 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
330 1 2.81865 0.23582 2.88868 2.35662 1 - -
|
|
331 1.38629 1.38629 1.38629 1.38629
|
|
332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
333 2 0.23862 2.84929 2.43386 2.70756 2 - -
|
|
334 1.38629 1.38629 1.38629 1.38629
|
|
335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
336 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
337 1.38629 1.38629 1.38629 1.38629
|
|
338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
339 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
340 1.38629 1.38629 1.38629 1.38629
|
|
341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
342 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
343 1.38629 1.38629 1.38629 1.38629
|
|
344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
345 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
346 1.38629 1.38629 1.38629 1.38629
|
|
347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
348 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
349 1.38629 1.38629 1.38629 1.38629
|
|
350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
351 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
352 1.38629 1.38629 1.38629 1.38629
|
|
353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
354 9 0.23862 2.84929 2.43386 2.70756 9 - -
|
|
355 1.38629 1.38629 1.38629 1.38629
|
|
356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
357 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
358 1.38629 1.38629 1.38629 1.38629
|
|
359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
360 11 2.57915 2.25909 2.64442 0.28946 11 - -
|
|
361 1.38629 1.38629 1.38629 1.38629
|
|
362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
363 12 2.53331 3.02441 0.20344 2.88069 12 - -
|
|
364 1.38629 1.38629 1.38629 1.38629
|
|
365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
366 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
367 1.38629 1.38629 1.38629 1.38629
|
|
368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
369 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
370 1.38629 1.38629 1.38629 1.38629
|
|
371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
372 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
373 1.38629 1.38629 1.38629 1.38629
|
|
374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
375 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
376 1.38629 1.38629 1.38629 1.38629
|
|
377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
378 17 2.57915 2.25909 2.64442 0.28946 17 - -
|
|
379 1.38629 1.38629 1.38629 1.38629
|
|
380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
381 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
382 1.38629 1.38629 1.38629 1.38629
|
|
383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
384 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
385 1.38629 1.38629 1.38629 1.38629
|
|
386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
387 20 2.53331 3.02441 0.20344 2.88069 20 - -
|
|
388 1.38629 1.38629 1.38629 1.38629
|
|
389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
390 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
391 1.38629 1.38629 1.38629 1.38629
|
|
392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
393 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
394 1.38629 1.38629 1.38629 1.38629
|
|
395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
396 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
397 1.38629 1.38629 1.38629 1.38629
|
|
398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
399 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
400 1.38629 1.38629 1.38629 1.38629
|
|
401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
402 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
403 1.38629 1.38629 1.38629 1.38629
|
|
404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
405 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
406 1.38629 1.38629 1.38629 1.38629
|
|
407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
408 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
409 1.38629 1.38629 1.38629 1.38629
|
|
410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
411 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
412 1.38629 1.38629 1.38629 1.38629
|
|
413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
414 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
415 1.38629 1.38629 1.38629 1.38629
|
|
416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
417 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
418 1.38629 1.38629 1.38629 1.38629
|
|
419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
420 31 2.53331 3.02441 0.20344 2.88069 31 - -
|
|
421 1.38629 1.38629 1.38629 1.38629
|
|
422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
423 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
424 1.38629 1.38629 1.38629 1.38629
|
|
425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
426 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
427 1.38629 1.38629 1.38629 1.38629
|
|
428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
429 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
430 1.38629 1.38629 1.38629 1.38629
|
|
431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
432 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
433 1.38629 1.38629 1.38629 1.38629
|
|
434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
435 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
436 1.38629 1.38629 1.38629 1.38629
|
|
437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
438 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
439 1.38629 1.38629 1.38629 1.38629
|
|
440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
441 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
442 1.38629 1.38629 1.38629 1.38629
|
|
443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
444 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
445 1.38629 1.38629 1.38629 1.38629
|
|
446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
447 40 2.57915 2.25909 2.64442 0.28946 40 - -
|
|
448 1.38629 1.38629 1.38629 1.38629
|
|
449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
450 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
451 1.38629 1.38629 1.38629 1.38629
|
|
452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
453 42 2.57915 2.25909 2.64442 0.28946 42 - -
|
|
454 1.38629 1.38629 1.38629 1.38629
|
|
455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
456 43 2.53331 3.02441 0.20344 2.88069 43 - -
|
|
457 1.38629 1.38629 1.38629 1.38629
|
|
458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
459 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
460 1.38629 1.38629 1.38629 1.38629
|
|
461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
462 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
463 1.38629 1.38629 1.38629 1.38629
|
|
464 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
465 //
|
|
466 HMMER3/b [3.0 | March 2010]
|
|
467 NAME 2_5.8_Synurophyceae_58S_start_one_long
|
|
468 LENG 45
|
|
469 ALPH DNA
|
|
470 RF no
|
|
471 CS no
|
|
472 MAP yes
|
|
473 DATE Thu Jan 19 22:02:32 2012
|
|
474 NSEQ 113
|
|
475 EFFN 3.251923
|
|
476 CKSUM 3036684999
|
|
477 STATS LOCAL MSV -7.9889 0.71933
|
|
478 STATS LOCAL VITERBI -7.7127 0.71933
|
|
479 STATS LOCAL FORWARD -4.0648 0.71933
|
|
480 HMM A C G T
|
|
481 m->m m->i m->d i->m i->i d->m d->d
|
|
482 COMPO 1.22272 1.32448 1.52659 1.50347
|
|
483 1.38629 1.38629 1.38629 1.38629
|
|
484 0.03737 3.99855 3.99855 1.46634 0.26236 0.00000 *
|
|
485 1 3.06553 2.58045 3.11456 0.18244 1 - -
|
|
486 1.38629 1.38629 1.38629 1.38629
|
|
487 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
488 2 3.40667 0.13341 3.45725 2.80971 2 - -
|
|
489 1.38629 1.38629 1.38629 1.38629
|
|
490 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
491 3 0.14496 3.35734 2.78701 3.25684 3 - -
|
|
492 1.38629 1.38629 1.38629 1.38629
|
|
493 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
494 4 3.40667 0.13341 3.45725 2.80971 4 - -
|
|
495 1.38629 1.38629 1.38629 1.38629
|
|
496 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
497 5 3.06553 2.58045 3.11456 0.18244 5 - -
|
|
498 1.38629 1.38629 1.38629 1.38629
|
|
499 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
500 6 3.06553 2.58045 3.11456 0.18244 6 - -
|
|
501 1.38629 1.38629 1.38629 1.38629
|
|
502 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
503 7 3.06553 2.58045 3.11456 0.18244 7 - -
|
|
504 1.38629 1.38629 1.38629 1.38629
|
|
505 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
506 8 3.40667 0.13341 3.45725 2.80971 8 - -
|
|
507 1.38629 1.38629 1.38629 1.38629
|
|
508 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
509 9 0.14496 3.35734 2.78701 3.25684 9 - -
|
|
510 1.38629 1.38629 1.38629 1.38629
|
|
511 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
512 10 2.93147 3.56444 0.11974 3.46671 10 - -
|
|
513 1.38629 1.38629 1.38629 1.38629
|
|
514 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
515 11 3.40667 0.13341 3.45725 2.80971 11 - -
|
|
516 1.38629 1.38629 1.38629 1.38629
|
|
517 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
518 12 0.14496 3.35734 2.78701 3.25684 12 - -
|
|
519 1.38629 1.38629 1.38629 1.38629
|
|
520 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
521 13 0.14496 3.35734 2.78701 3.25684 13 - -
|
|
522 1.38629 1.38629 1.38629 1.38629
|
|
523 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
524 14 3.40667 0.13341 3.45725 2.80971 14 - -
|
|
525 1.38629 1.38629 1.38629 1.38629
|
|
526 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
527 15 2.93147 3.56444 0.11974 3.46671 15 - -
|
|
528 1.38629 1.38629 1.38629 1.38629
|
|
529 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
530 16 2.93147 3.56444 0.11974 3.46671 16 - -
|
|
531 1.38629 1.38629 1.38629 1.38629
|
|
532 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
533 17 0.14496 3.35734 2.78701 3.25684 17 - -
|
|
534 1.38629 1.38629 1.38629 1.38629
|
|
535 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
536 18 3.06553 2.58045 3.11456 0.18244 18 - -
|
|
537 1.38629 1.38629 1.38629 1.38629
|
|
538 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
539 19 2.93147 3.56444 0.11974 3.46671 19 - -
|
|
540 1.38629 1.38629 1.38629 1.38629
|
|
541 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
542 20 3.06553 2.58045 3.11456 0.18244 20 - -
|
|
543 1.38629 1.38629 1.38629 1.38629
|
|
544 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
545 21 3.40667 0.13341 3.45725 2.80971 21 - -
|
|
546 1.38629 1.38629 1.38629 1.38629
|
|
547 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
548 22 3.06553 2.58045 3.11456 0.18244 22 - -
|
|
549 1.38629 1.38629 1.38629 1.38629
|
|
550 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
551 23 0.14496 3.35734 2.78701 3.25684 23 - -
|
|
552 1.38629 1.38629 1.38629 1.38629
|
|
553 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
554 24 2.93147 3.56444 0.11974 3.46671 24 - -
|
|
555 1.38629 1.38629 1.38629 1.38629
|
|
556 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
557 25 2.93147 3.56444 0.11974 3.46671 25 - -
|
|
558 1.38629 1.38629 1.38629 1.38629
|
|
559 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
560 26 3.06553 2.58045 3.11456 0.18244 26 - -
|
|
561 1.38629 1.38629 1.38629 1.38629
|
|
562 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
563 27 3.06553 2.58045 3.11456 0.18244 27 - -
|
|
564 1.38629 1.38629 1.38629 1.38629
|
|
565 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
566 28 3.40667 0.13341 3.45725 2.80971 28 - -
|
|
567 1.38629 1.38629 1.38629 1.38629
|
|
568 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
569 29 3.40667 0.13341 3.45725 2.80971 29 - -
|
|
570 1.38629 1.38629 1.38629 1.38629
|
|
571 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
572 30 3.40667 0.13341 3.45725 2.80971 30 - -
|
|
573 1.38629 1.38629 1.38629 1.38629
|
|
574 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
575 31 0.14496 3.35734 2.78701 3.25684 31 - -
|
|
576 1.38629 1.38629 1.38629 1.38629
|
|
577 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
578 32 3.40667 0.13341 3.45725 2.80971 32 - -
|
|
579 1.38629 1.38629 1.38629 1.38629
|
|
580 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
581 33 0.14496 3.35734 2.78701 3.25684 33 - -
|
|
582 1.38629 1.38629 1.38629 1.38629
|
|
583 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
584 34 0.18088 2.96714 2.70498 3.05460 34 - -
|
|
585 1.38629 1.38629 1.38629 1.38629
|
|
586 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
587 35 3.40667 0.13341 3.45725 2.80971 35 - -
|
|
588 1.38629 1.38629 1.38629 1.38629
|
|
589 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
590 36 2.93147 3.56444 0.11974 3.46671 36 - -
|
|
591 1.38629 1.38629 1.38629 1.38629
|
|
592 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
593 37 0.14496 3.35734 2.78701 3.25684 37 - -
|
|
594 1.38629 1.38629 1.38629 1.38629
|
|
595 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
596 38 3.06553 2.58045 3.11456 0.18244 38 - -
|
|
597 1.38629 1.38629 1.38629 1.38629
|
|
598 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
599 39 2.93147 3.56444 0.11974 3.46671 39 - -
|
|
600 1.38629 1.38629 1.38629 1.38629
|
|
601 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
602 40 0.14496 3.35734 2.78701 3.25684 40 - -
|
|
603 1.38629 1.38629 1.38629 1.38629
|
|
604 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
605 41 0.14496 3.35734 2.78701 3.25684 41 - -
|
|
606 1.38629 1.38629 1.38629 1.38629
|
|
607 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
608 42 2.93147 3.56444 0.11974 3.46671 42 - -
|
|
609 1.38629 1.38629 1.38629 1.38629
|
|
610 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
611 43 0.14496 3.35734 2.78701 3.25684 43 - -
|
|
612 1.38629 1.38629 1.38629 1.38629
|
|
613 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
614 44 0.14496 3.35734 2.78701 3.25684 44 - -
|
|
615 1.38629 1.38629 1.38629 1.38629
|
|
616 0.03737 3.99855 3.99855 1.46634 0.26236 1.09861 0.40547
|
|
617 45 3.40667 0.13341 3.45725 2.80971 45 - -
|
|
618 1.38629 1.38629 1.38629 1.38629
|
|
619 0.01886 3.98004 * 1.46634 0.26236 0.00000 *
|
|
620 //
|
|
621 HMMER3/b [3.0 | March 2010]
|
|
622 NAME 2_5.8_Synurophyceae_58S_start_three_long
|
|
623 LENG 45
|
|
624 ALPH DNA
|
|
625 RF no
|
|
626 CS no
|
|
627 MAP yes
|
|
628 DATE Thu Jan 19 22:02:47 2012
|
|
629 NSEQ 2
|
|
630 EFFN 2.000000
|
|
631 CKSUM 3548777912
|
|
632 STATS LOCAL MSV -7.5764 0.72791
|
|
633 STATS LOCAL VITERBI -8.0244 0.72791
|
|
634 STATS LOCAL FORWARD -3.4276 0.72791
|
|
635 HMM A C G T
|
|
636 m->m m->i m->d i->m i->i d->m d->d
|
|
637 COMPO 1.19013 1.34822 1.49687 1.54982
|
|
638 1.38629 1.38629 1.38629 1.38629
|
|
639 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
640 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
641 1.38629 1.38629 1.38629 1.38629
|
|
642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
643 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
644 1.38629 1.38629 1.38629 1.38629
|
|
645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
646 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
647 1.38629 1.38629 1.38629 1.38629
|
|
648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
649 4 2.81865 0.23582 2.88868 2.35662 4 - -
|
|
650 1.38629 1.38629 1.38629 1.38629
|
|
651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
652 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
653 1.38629 1.38629 1.38629 1.38629
|
|
654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
655 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
656 1.38629 1.38629 1.38629 1.38629
|
|
657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
658 7 2.81865 0.23582 2.88868 2.35662 7 - -
|
|
659 1.38629 1.38629 1.38629 1.38629
|
|
660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
661 8 2.57915 2.25909 2.64442 0.28946 8 - -
|
|
662 1.38629 1.38629 1.38629 1.38629
|
|
663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
664 9 0.23862 2.84929 2.43386 2.70756 9 - -
|
|
665 1.38629 1.38629 1.38629 1.38629
|
|
666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
667 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
668 1.38629 1.38629 1.38629 1.38629
|
|
669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
670 11 2.81865 0.23582 2.88868 2.35662 11 - -
|
|
671 1.38629 1.38629 1.38629 1.38629
|
|
672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
673 12 0.23862 2.84929 2.43386 2.70756 12 - -
|
|
674 1.38629 1.38629 1.38629 1.38629
|
|
675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
676 13 0.23862 2.84929 2.43386 2.70756 13 - -
|
|
677 1.38629 1.38629 1.38629 1.38629
|
|
678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
679 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
680 1.38629 1.38629 1.38629 1.38629
|
|
681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
682 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
683 1.38629 1.38629 1.38629 1.38629
|
|
684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
685 16 2.53331 3.02441 0.20344 2.88069 16 - -
|
|
686 1.38629 1.38629 1.38629 1.38629
|
|
687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
688 17 0.23862 2.84929 2.43386 2.70756 17 - -
|
|
689 1.38629 1.38629 1.38629 1.38629
|
|
690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
691 18 2.57915 2.25909 2.64442 0.28946 18 - -
|
|
692 1.38629 1.38629 1.38629 1.38629
|
|
693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
694 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
695 1.38629 1.38629 1.38629 1.38629
|
|
696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
697 20 2.57915 2.25909 2.64442 0.28946 20 - -
|
|
698 1.38629 1.38629 1.38629 1.38629
|
|
699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
700 21 2.81865 0.23582 2.88868 2.35662 21 - -
|
|
701 1.38629 1.38629 1.38629 1.38629
|
|
702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
703 22 2.57915 2.25909 2.64442 0.28946 22 - -
|
|
704 1.38629 1.38629 1.38629 1.38629
|
|
705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
706 23 0.23862 2.84929 2.43386 2.70756 23 - -
|
|
707 1.38629 1.38629 1.38629 1.38629
|
|
708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
709 24 2.53331 3.02441 0.20344 2.88069 24 - -
|
|
710 1.38629 1.38629 1.38629 1.38629
|
|
711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
712 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
713 1.38629 1.38629 1.38629 1.38629
|
|
714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
715 26 2.81865 0.23582 2.88868 2.35662 26 - -
|
|
716 1.38629 1.38629 1.38629 1.38629
|
|
717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
718 27 2.57915 2.25909 2.64442 0.28946 27 - -
|
|
719 1.38629 1.38629 1.38629 1.38629
|
|
720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
721 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
722 1.38629 1.38629 1.38629 1.38629
|
|
723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
724 29 2.57915 2.25909 2.64442 0.28946 29 - -
|
|
725 1.38629 1.38629 1.38629 1.38629
|
|
726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
727 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
728 1.38629 1.38629 1.38629 1.38629
|
|
729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
730 31 0.23862 2.84929 2.43386 2.70756 31 - -
|
|
731 1.38629 1.38629 1.38629 1.38629
|
|
732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
733 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
734 1.38629 1.38629 1.38629 1.38629
|
|
735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
736 33 0.23862 2.84929 2.43386 2.70756 33 - -
|
|
737 1.38629 1.38629 1.38629 1.38629
|
|
738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
739 34 0.23862 2.84929 2.43386 2.70756 34 - -
|
|
740 1.38629 1.38629 1.38629 1.38629
|
|
741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
742 35 2.81865 0.23582 2.88868 2.35662 35 - -
|
|
743 1.38629 1.38629 1.38629 1.38629
|
|
744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
745 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
746 1.38629 1.38629 1.38629 1.38629
|
|
747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
748 37 0.23862 2.84929 2.43386 2.70756 37 - -
|
|
749 1.38629 1.38629 1.38629 1.38629
|
|
750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
751 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
752 1.38629 1.38629 1.38629 1.38629
|
|
753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
754 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
755 1.38629 1.38629 1.38629 1.38629
|
|
756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
757 40 0.23862 2.84929 2.43386 2.70756 40 - -
|
|
758 1.38629 1.38629 1.38629 1.38629
|
|
759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
760 41 0.23862 2.84929 2.43386 2.70756 41 - -
|
|
761 1.38629 1.38629 1.38629 1.38629
|
|
762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
763 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
764 1.38629 1.38629 1.38629 1.38629
|
|
765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
766 43 0.23862 2.84929 2.43386 2.70756 43 - -
|
|
767 1.38629 1.38629 1.38629 1.38629
|
|
768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
769 44 0.23862 2.84929 2.43386 2.70756 44 - -
|
|
770 1.38629 1.38629 1.38629 1.38629
|
|
771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
772 45 2.81865 0.23582 2.88868 2.35662 45 - -
|
|
773 1.38629 1.38629 1.38629 1.38629
|
|
774 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
775 //
|
|
776 HMMER3/b [3.0 | March 2010]
|
|
777 NAME 2_5.8_Synurophyceae_58S_start_two_long
|
|
778 LENG 45
|
|
779 ALPH DNA
|
|
780 RF no
|
|
781 CS no
|
|
782 MAP yes
|
|
783 DATE Thu Jan 19 22:02:39 2012
|
|
784 NSEQ 3
|
|
785 EFFN 3.000000
|
|
786 CKSUM 3348200563
|
|
787 STATS LOCAL MSV -8.0376 0.72066
|
|
788 STATS LOCAL VITERBI -7.7807 0.72066
|
|
789 STATS LOCAL FORWARD -4.1031 0.72066
|
|
790 HMM A C G T
|
|
791 m->m m->i m->d i->m i->i d->m d->d
|
|
792 COMPO 1.24048 1.32496 1.50510 1.50083
|
|
793 1.38629 1.38629 1.38629 1.38629
|
|
794 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
795 1 0.15719 3.27118 2.73043 3.16274 1 - -
|
|
796 1.38629 1.38629 1.38629 1.38629
|
|
797 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
798 2 3.30705 0.14631 3.36166 2.73626 2 - -
|
|
799 1.38629 1.38629 1.38629 1.38629
|
|
800 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
801 3 0.15719 3.27118 2.73043 3.16274 3 - -
|
|
802 1.38629 1.38629 1.38629 1.38629
|
|
803 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
804 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
805 1.38629 1.38629 1.38629 1.38629
|
|
806 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
807 5 2.97980 2.52563 3.03204 0.19727 5 - -
|
|
808 1.38629 1.38629 1.38629 1.38629
|
|
809 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
810 6 2.97980 2.52563 3.03204 0.19727 6 - -
|
|
811 1.38629 1.38629 1.38629 1.38629
|
|
812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
813 7 2.97980 2.52563 3.03204 0.19727 7 - -
|
|
814 1.38629 1.38629 1.38629 1.38629
|
|
815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
816 8 3.30705 0.14631 3.36166 2.73626 8 - -
|
|
817 1.38629 1.38629 1.38629 1.38629
|
|
818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
819 9 0.15719 3.27118 2.73043 3.16274 9 - -
|
|
820 1.38629 1.38629 1.38629 1.38629
|
|
821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
822 10 2.86982 3.47591 0.13017 3.36931 10 - -
|
|
823 1.38629 1.38629 1.38629 1.38629
|
|
824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
825 11 3.30705 0.14631 3.36166 2.73626 11 - -
|
|
826 1.38629 1.38629 1.38629 1.38629
|
|
827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
828 12 0.15719 3.27118 2.73043 3.16274 12 - -
|
|
829 1.38629 1.38629 1.38629 1.38629
|
|
830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
831 13 0.15719 3.27118 2.73043 3.16274 13 - -
|
|
832 1.38629 1.38629 1.38629 1.38629
|
|
833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
834 14 3.30705 0.14631 3.36166 2.73626 14 - -
|
|
835 1.38629 1.38629 1.38629 1.38629
|
|
836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
837 15 2.86982 3.47591 0.13017 3.36931 15 - -
|
|
838 1.38629 1.38629 1.38629 1.38629
|
|
839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
840 16 2.86982 3.47591 0.13017 3.36931 16 - -
|
|
841 1.38629 1.38629 1.38629 1.38629
|
|
842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
843 17 0.15719 3.27118 2.73043 3.16274 17 - -
|
|
844 1.38629 1.38629 1.38629 1.38629
|
|
845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
846 18 2.97980 2.52563 3.03204 0.19727 18 - -
|
|
847 1.38629 1.38629 1.38629 1.38629
|
|
848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
849 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
850 1.38629 1.38629 1.38629 1.38629
|
|
851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
852 20 2.97980 2.52563 3.03204 0.19727 20 - -
|
|
853 1.38629 1.38629 1.38629 1.38629
|
|
854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
855 21 3.30705 0.14631 3.36166 2.73626 21 - -
|
|
856 1.38629 1.38629 1.38629 1.38629
|
|
857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
858 22 2.97980 2.52563 3.03204 0.19727 22 - -
|
|
859 1.38629 1.38629 1.38629 1.38629
|
|
860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
861 23 2.97980 2.52563 3.03204 0.19727 23 - -
|
|
862 1.38629 1.38629 1.38629 1.38629
|
|
863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
864 24 2.86982 3.47591 0.13017 3.36931 24 - -
|
|
865 1.38629 1.38629 1.38629 1.38629
|
|
866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
867 25 2.86982 3.47591 0.13017 3.36931 25 - -
|
|
868 1.38629 1.38629 1.38629 1.38629
|
|
869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
870 26 2.97980 2.52563 3.03204 0.19727 26 - -
|
|
871 1.38629 1.38629 1.38629 1.38629
|
|
872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
873 27 2.97980 2.52563 3.03204 0.19727 27 - -
|
|
874 1.38629 1.38629 1.38629 1.38629
|
|
875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
876 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
877 1.38629 1.38629 1.38629 1.38629
|
|
878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
879 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
880 1.38629 1.38629 1.38629 1.38629
|
|
881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
882 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
883 1.38629 1.38629 1.38629 1.38629
|
|
884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
885 31 0.54133 2.56226 1.37841 2.42004 31 - -
|
|
886 1.38629 1.38629 1.38629 1.38629
|
|
887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
888 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
889 1.38629 1.38629 1.38629 1.38629
|
|
890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
891 33 0.15719 3.27118 2.73043 3.16274 33 - -
|
|
892 1.38629 1.38629 1.38629 1.38629
|
|
893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
894 34 0.15719 3.27118 2.73043 3.16274 34 - -
|
|
895 1.38629 1.38629 1.38629 1.38629
|
|
896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
897 35 3.30705 0.14631 3.36166 2.73626 35 - -
|
|
898 1.38629 1.38629 1.38629 1.38629
|
|
899 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
900 36 2.86982 3.47591 0.13017 3.36931 36 - -
|
|
901 1.38629 1.38629 1.38629 1.38629
|
|
902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
903 37 0.15719 3.27118 2.73043 3.16274 37 - -
|
|
904 1.38629 1.38629 1.38629 1.38629
|
|
905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
906 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
907 1.38629 1.38629 1.38629 1.38629
|
|
908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
909 39 2.86982 3.47591 0.13017 3.36931 39 - -
|
|
910 1.38629 1.38629 1.38629 1.38629
|
|
911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
912 40 0.15719 3.27118 2.73043 3.16274 40 - -
|
|
913 1.38629 1.38629 1.38629 1.38629
|
|
914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
915 41 0.15719 3.27118 2.73043 3.16274 41 - -
|
|
916 1.38629 1.38629 1.38629 1.38629
|
|
917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
918 42 2.86982 3.47591 0.13017 3.36931 42 - -
|
|
919 1.38629 1.38629 1.38629 1.38629
|
|
920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
921 43 0.15719 3.27118 2.73043 3.16274 43 - -
|
|
922 1.38629 1.38629 1.38629 1.38629
|
|
923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
924 44 0.15719 3.27118 2.73043 3.16274 44 - -
|
|
925 1.38629 1.38629 1.38629 1.38629
|
|
926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
927 45 3.30705 0.14631 3.36166 2.73626 45 - -
|
|
928 1.38629 1.38629 1.38629 1.38629
|
|
929 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
930 //
|
|
931 HMMER3/b [3.0 | March 2010]
|
|
932 NAME 4_LSU_Synurophyceae_4_LSU_start_long
|
|
933 LENG 45
|
|
934 ALPH DNA
|
|
935 RF no
|
|
936 CS no
|
|
937 MAP yes
|
|
938 DATE Mon Jan 16 13:05:25 2012
|
|
939 NSEQ 92
|
|
940 EFFN 3.383179
|
|
941 CKSUM 3877202179
|
|
942 STATS LOCAL MSV -7.7500 0.71933
|
|
943 STATS LOCAL VITERBI -7.6929 0.71933
|
|
944 STATS LOCAL FORWARD -3.8573 0.71933
|
|
945 HMM A C G T
|
|
946 m->m m->i m->d i->m i->i d->m d->d
|
|
947 COMPO 1.16351 1.31430 1.69409 1.44739
|
|
948 1.38629 1.38629 1.38629 1.38629
|
|
949 0.03648 4.02234 4.02234 1.46634 0.26236 0.00000 *
|
|
950 1 0.13939 3.39944 2.81436 3.30292 1 - -
|
|
951 1.38629 1.38629 1.38629 1.38629
|
|
952 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
953 2 3.10801 2.60747 3.15542 0.17558 2 - -
|
|
954 1.38629 1.38629 1.38629 1.38629
|
|
955 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
956 3 3.45519 0.12760 3.50371 2.84505 3 - -
|
|
957 1.38629 1.38629 1.38629 1.38629
|
|
958 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
959 4 2.96086 3.60718 0.11506 3.51387 4 - -
|
|
960 1.38629 1.38629 1.38629 1.38629
|
|
961 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
962 5 2.96086 3.60718 0.11506 3.51387 5 - -
|
|
963 1.38629 1.38629 1.38629 1.38629
|
|
964 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
965 6 0.13939 3.39944 2.81436 3.30292 6 - -
|
|
966 1.38629 1.38629 1.38629 1.38629
|
|
967 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
968 7 3.45519 0.12760 3.50371 2.84505 7 - -
|
|
969 1.38629 1.38629 1.38629 1.38629
|
|
970 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
971 8 3.45519 0.12760 3.50371 2.84505 8 - -
|
|
972 1.38629 1.38629 1.38629 1.38629
|
|
973 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
974 9 3.10801 2.60747 3.15542 0.17558 9 - -
|
|
975 1.38629 1.38629 1.38629 1.38629
|
|
976 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
977 10 3.45519 0.12760 3.50371 2.84505 10 - -
|
|
978 1.38629 1.38629 1.38629 1.38629
|
|
979 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
980 11 3.45519 0.12760 3.50371 2.84505 11 - -
|
|
981 1.38629 1.38629 1.38629 1.38629
|
|
982 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
983 12 0.13939 3.39944 2.81436 3.30292 12 - -
|
|
984 1.38629 1.38629 1.38629 1.38629
|
|
985 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
986 13 0.13939 3.39944 2.81436 3.30292 13 - -
|
|
987 1.38629 1.38629 1.38629 1.38629
|
|
988 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
989 14 3.10801 2.60747 3.15542 0.17558 14 - -
|
|
990 1.38629 1.38629 1.38629 1.38629
|
|
991 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
992 15 3.45519 0.12760 3.50371 2.84505 15 - -
|
|
993 1.38629 1.38629 1.38629 1.38629
|
|
994 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
995 16 0.13939 3.39944 2.81436 3.30292 16 - -
|
|
996 1.38629 1.38629 1.38629 1.38629
|
|
997 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
998 17 2.96086 3.60718 0.11506 3.51387 17 - -
|
|
999 1.38629 1.38629 1.38629 1.38629
|
|
1000 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1001 18 2.75765 2.46303 2.45084 0.26767 18 - -
|
|
1002 1.38629 1.38629 1.38629 1.38629
|
|
1003 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1004 19 3.45519 0.12760 3.50371 2.84505 19 - -
|
|
1005 1.38629 1.38629 1.38629 1.38629
|
|
1006 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1007 20 0.13939 3.39944 2.81436 3.30292 20 - -
|
|
1008 1.38629 1.38629 1.38629 1.38629
|
|
1009 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1010 21 0.18638 2.89150 2.70744 3.03986 21 - -
|
|
1011 1.38629 1.38629 1.38629 1.38629
|
|
1012 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1013 22 2.96086 3.60718 0.11506 3.51387 22 - -
|
|
1014 1.38629 1.38629 1.38629 1.38629
|
|
1015 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1016 23 0.13939 3.39944 2.81436 3.30292 23 - -
|
|
1017 1.38629 1.38629 1.38629 1.38629
|
|
1018 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1019 24 2.95237 2.24501 3.00553 0.23276 24 - -
|
|
1020 1.38629 1.38629 1.38629 1.38629
|
|
1021 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1022 25 2.95237 2.24501 3.00553 0.23276 25 - -
|
|
1023 1.38629 1.38629 1.38629 1.38629
|
|
1024 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1025 26 0.13939 3.39944 2.81436 3.30292 26 - -
|
|
1026 1.38629 1.38629 1.38629 1.38629
|
|
1027 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1028 27 3.45519 0.12760 3.50371 2.84505 27 - -
|
|
1029 1.38629 1.38629 1.38629 1.38629
|
|
1030 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1031 28 3.45519 0.12760 3.50371 2.84505 28 - -
|
|
1032 1.38629 1.38629 1.38629 1.38629
|
|
1033 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1034 29 3.45519 0.12760 3.50371 2.84505 29 - -
|
|
1035 1.38629 1.38629 1.38629 1.38629
|
|
1036 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1037 30 2.96086 3.60718 0.11506 3.51387 30 - -
|
|
1038 1.38629 1.38629 1.38629 1.38629
|
|
1039 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1040 31 3.45519 0.12760 3.50371 2.84505 31 - -
|
|
1041 1.38629 1.38629 1.38629 1.38629
|
|
1042 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1043 32 3.10801 2.60747 3.15542 0.17558 32 - -
|
|
1044 1.38629 1.38629 1.38629 1.38629
|
|
1045 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1046 33 2.96086 3.60718 0.11506 3.51387 33 - -
|
|
1047 1.38629 1.38629 1.38629 1.38629
|
|
1048 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1049 34 0.13939 3.39944 2.81436 3.30292 34 - -
|
|
1050 1.38629 1.38629 1.38629 1.38629
|
|
1051 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1052 35 0.13939 3.39944 2.81436 3.30292 35 - -
|
|
1053 1.38629 1.38629 1.38629 1.38629
|
|
1054 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1055 36 3.10801 2.60747 3.15542 0.17558 36 - -
|
|
1056 1.38629 1.38629 1.38629 1.38629
|
|
1057 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1058 37 3.10801 2.60747 3.15542 0.17558 37 - -
|
|
1059 1.38629 1.38629 1.38629 1.38629
|
|
1060 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1061 38 3.10801 2.60747 3.15542 0.17558 38 - -
|
|
1062 1.38629 1.38629 1.38629 1.38629
|
|
1063 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1064 39 0.13939 3.39944 2.81436 3.30292 39 - -
|
|
1065 1.38629 1.38629 1.38629 1.38629
|
|
1066 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1067 40 0.13939 3.39944 2.81436 3.30292 40 - -
|
|
1068 1.38629 1.38629 1.38629 1.38629
|
|
1069 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1070 41 2.96086 3.60718 0.11506 3.51387 41 - -
|
|
1071 1.38629 1.38629 1.38629 1.38629
|
|
1072 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1073 42 3.45519 0.12760 3.50371 2.84505 42 - -
|
|
1074 1.38629 1.38629 1.38629 1.38629
|
|
1075 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1076 43 0.13939 3.39944 2.81436 3.30292 43 - -
|
|
1077 1.38629 1.38629 1.38629 1.38629
|
|
1078 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1079 44 3.10801 2.60747 3.15542 0.17558 44 - -
|
|
1080 1.38629 1.38629 1.38629 1.38629
|
|
1081 0.03648 4.02234 4.02234 1.46634 0.26236 1.09861 0.40547
|
|
1082 45 0.13939 3.39944 2.81436 3.30292 45 - -
|
|
1083 1.38629 1.38629 1.38629 1.38629
|
|
1084 0.01841 4.00427 * 1.46634 0.26236 0.00000 *
|
|
1085 //
|
|
1086 HMMER3/b [3.0 | March 2010]
|
|
1087 NAME 1_SSU_Synurophyceae_1_SSU_end_long
|
|
1088 LENG 45
|
|
1089 ALPH DNA
|
|
1090 RF no
|
|
1091 CS no
|
|
1092 MAP yes
|
|
1093 DATE Sat Oct 8 22:49:10 2011
|
|
1094 NSEQ 97
|
|
1095 EFFN 3.229584
|
|
1096 CKSUM 3925539151
|
|
1097 STATS LOCAL MSV -8.0048 0.71932
|
|
1098 STATS LOCAL VITERBI -7.6817 0.71932
|
|
1099 STATS LOCAL FORWARD -4.1102 0.71932
|
|
1100 HMM A C G T
|
|
1101 m->m m->i m->d i->m i->i d->m d->d
|
|
1102 COMPO 1.27187 1.62651 1.24657 1.44566
|
|
1103 1.38629 1.38629 1.38629 1.38629
|
|
1104 0.03753 3.99445 3.99445 1.46634 0.26236 0.00000 *
|
|
1105 1 0.14596 3.34999 2.78222 3.24880 1 - -
|
|
1106 1.38629 1.38629 1.38629 1.38629
|
|
1107 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1108 2 2.92629 3.55695 0.12059 3.45844 2 - -
|
|
1109 1.38629 1.38629 1.38629 1.38629
|
|
1110 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1111 3 3.05815 2.57575 3.10747 0.18366 3 - -
|
|
1112 1.38629 1.38629 1.38629 1.38629
|
|
1113 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1114 4 3.39819 0.13445 3.44912 2.80351 4 - -
|
|
1115 1.38629 1.38629 1.38629 1.38629
|
|
1116 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1117 5 2.92629 3.55695 0.12059 3.45844 5 - -
|
|
1118 1.38629 1.38629 1.38629 1.38629
|
|
1119 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1120 6 3.05815 2.57575 3.10747 0.18366 6 - -
|
|
1121 1.38629 1.38629 1.38629 1.38629
|
|
1122 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1123 7 0.14596 3.34999 2.78222 3.24880 7 - -
|
|
1124 1.38629 1.38629 1.38629 1.38629
|
|
1125 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1126 8 0.14596 3.34999 2.78222 3.24880 8 - -
|
|
1127 1.38629 1.38629 1.38629 1.38629
|
|
1128 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1129 9 3.39819 0.13445 3.44912 2.80351 9 - -
|
|
1130 1.38629 1.38629 1.38629 1.38629
|
|
1131 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1132 10 0.14596 3.34999 2.78222 3.24880 10 - -
|
|
1133 1.38629 1.38629 1.38629 1.38629
|
|
1134 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1135 11 0.14596 3.34999 2.78222 3.24880 11 - -
|
|
1136 1.38629 1.38629 1.38629 1.38629
|
|
1137 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1138 12 2.92629 3.55695 0.12059 3.45844 12 - -
|
|
1139 1.38629 1.38629 1.38629 1.38629
|
|
1140 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1141 13 2.92629 3.55695 0.12059 3.45844 13 - -
|
|
1142 1.38629 1.38629 1.38629 1.38629
|
|
1143 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1144 14 3.05815 2.57575 3.10747 0.18366 14 - -
|
|
1145 1.38629 1.38629 1.38629 1.38629
|
|
1146 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1147 15 3.05815 2.57575 3.10747 0.18366 15 - -
|
|
1148 1.38629 1.38629 1.38629 1.38629
|
|
1149 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1150 16 3.05815 2.57575 3.10747 0.18366 16 - -
|
|
1151 1.38629 1.38629 1.38629 1.38629
|
|
1152 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1153 17 3.39819 0.13445 3.44912 2.80351 17 - -
|
|
1154 1.38629 1.38629 1.38629 1.38629
|
|
1155 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1156 18 3.39819 0.13445 3.44912 2.80351 18 - -
|
|
1157 1.38629 1.38629 1.38629 1.38629
|
|
1158 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1159 19 2.92629 3.55695 0.12059 3.45844 19 - -
|
|
1160 1.38629 1.38629 1.38629 1.38629
|
|
1161 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1162 20 3.05815 2.57575 3.10747 0.18366 20 - -
|
|
1163 1.38629 1.38629 1.38629 1.38629
|
|
1164 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1165 21 0.14596 3.34999 2.78222 3.24880 21 - -
|
|
1166 1.38629 1.38629 1.38629 1.38629
|
|
1167 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1168 22 2.92629 3.55695 0.12059 3.45844 22 - -
|
|
1169 1.38629 1.38629 1.38629 1.38629
|
|
1170 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1171 23 2.92629 3.55695 0.12059 3.45844 23 - -
|
|
1172 1.38629 1.38629 1.38629 1.38629
|
|
1173 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1174 24 3.05815 2.57575 3.10747 0.18366 24 - -
|
|
1175 1.38629 1.38629 1.38629 1.38629
|
|
1176 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1177 25 2.92629 3.55695 0.12059 3.45844 25 - -
|
|
1178 1.38629 1.38629 1.38629 1.38629
|
|
1179 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1180 26 0.14596 3.34999 2.78222 3.24880 26 - -
|
|
1181 1.38629 1.38629 1.38629 1.38629
|
|
1182 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1183 27 0.14596 3.34999 2.78222 3.24880 27 - -
|
|
1184 1.38629 1.38629 1.38629 1.38629
|
|
1185 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1186 28 3.39819 0.13445 3.44912 2.80351 28 - -
|
|
1187 1.38629 1.38629 1.38629 1.38629
|
|
1188 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1189 29 3.39819 0.13445 3.44912 2.80351 29 - -
|
|
1190 1.38629 1.38629 1.38629 1.38629
|
|
1191 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1192 30 3.05815 2.57575 3.10747 0.18366 30 - -
|
|
1193 1.38629 1.38629 1.38629 1.38629
|
|
1194 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1195 31 2.92629 3.55695 0.12059 3.45844 31 - -
|
|
1196 1.38629 1.38629 1.38629 1.38629
|
|
1197 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1198 32 3.39819 0.13445 3.44912 2.80351 32 - -
|
|
1199 1.38629 1.38629 1.38629 1.38629
|
|
1200 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1201 33 2.92629 3.55695 0.12059 3.45844 33 - -
|
|
1202 1.38629 1.38629 1.38629 1.38629
|
|
1203 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1204 34 2.92629 3.55695 0.12059 3.45844 34 - -
|
|
1205 1.38629 1.38629 1.38629 1.38629
|
|
1206 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1207 35 0.14596 3.34999 2.78222 3.24880 35 - -
|
|
1208 1.38629 1.38629 1.38629 1.38629
|
|
1209 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1210 36 0.14596 3.34999 2.78222 3.24880 36 - -
|
|
1211 1.38629 1.38629 1.38629 1.38629
|
|
1212 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1213 37 2.92629 3.55695 0.12059 3.45844 37 - -
|
|
1214 1.38629 1.38629 1.38629 1.38629
|
|
1215 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1216 38 2.92629 3.55695 0.12059 3.45844 38 - -
|
|
1217 1.38629 1.38629 1.38629 1.38629
|
|
1218 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1219 39 0.14596 3.34999 2.78222 3.24880 39 - -
|
|
1220 1.38629 1.38629 1.38629 1.38629
|
|
1221 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1222 40 3.05815 2.57575 3.10747 0.18366 40 - -
|
|
1223 1.38629 1.38629 1.38629 1.38629
|
|
1224 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1225 41 3.39819 0.13445 3.44912 2.80351 41 - -
|
|
1226 1.38629 1.38629 1.38629 1.38629
|
|
1227 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1228 42 0.14596 3.34999 2.78222 3.24880 42 - -
|
|
1229 1.38629 1.38629 1.38629 1.38629
|
|
1230 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1231 43 3.05815 2.57575 3.10747 0.18366 43 - -
|
|
1232 1.38629 1.38629 1.38629 1.38629
|
|
1233 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1234 44 3.05815 2.57575 3.10747 0.18366 44 - -
|
|
1235 1.38629 1.38629 1.38629 1.38629
|
|
1236 0.03753 3.99445 3.99445 1.46634 0.26236 1.09861 0.40547
|
|
1237 45 0.14596 3.34999 2.78222 3.24880 45 - -
|
|
1238 1.38629 1.38629 1.38629 1.38629
|
|
1239 0.01894 3.97586 * 1.46634 0.26236 0.00000 *
|
|
1240 //
|