itsx: ITSx_db/HMMs/U.hmm annotate

annotate ITSx_db/HMMs/U.hmm @ 9:3610c6312b85 draft default tip

Uploaded

author	okorol
date	Fri, 05 Jun 2015 12:05:37 -0400
parents	f82c70f54bd7
children

rev	line source
0 f82c70f54bd7 Uploaded okorol parents: diff changeset	1 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	2 NAME 3_End_Eustigmatophyceae_58S_end_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	3 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	4 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	5 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	6 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	7 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	8 DATE Sun Sep 25 01:39:32 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	9 NSEQ 6
f82c70f54bd7 Uploaded okorol parents: diff changeset	10 EFFN 3.336914
f82c70f54bd7 Uploaded okorol parents: diff changeset	11 CKSUM 3393550359
f82c70f54bd7 Uploaded okorol parents: diff changeset	12 STATS LOCAL MSV -8.0163 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	13 STATS LOCAL VITERBI -7.6944 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	14 STATS LOCAL FORWARD -4.0151 0.71932
f82c70f54bd7 Uploaded okorol parents: diff changeset	15 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	16 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	17 COMPO 1.93226 1.59605 1.19721 1.04854
f82c70f54bd7 Uploaded okorol parents: diff changeset	18 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	19 0.03679 4.01402 4.01402 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	20 1 3.43835 0.12958 3.48758 2.83281 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	21 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	22 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	23 2 2.95070 3.59237 0.11666 3.49752 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	24 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	25 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	26 3 3.43835 0.12958 3.48758 2.83281 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	27 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	28 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	29 4 3.09320 2.59806 3.14118 0.17794 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	30 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	31 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	32 5 3.09320 2.59806 3.14118 0.17794 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	33 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	34 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	35 6 3.09320 2.59806 3.14118 0.17794 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	36 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	37 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	38 7 3.43835 0.12958 3.48758 2.83281 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	39 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	40 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	41 8 2.95070 3.59237 0.11666 3.49752 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	42 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	43 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	44 9 2.95070 3.59237 0.11666 3.49752 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	45 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	46 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	47 10 2.95070 3.59237 0.11666 3.49752 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	48 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	49 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	50 11 0.14130 3.38481 2.80488 3.28690 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	51 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	52 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	53 12 3.09320 2.59806 3.14118 0.17794 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	54 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	55 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	56 13 0.14130 3.38481 2.80488 3.28690 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	57 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	58 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	59 14 3.09320 2.59806 3.14118 0.17794 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	60 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	61 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	62 15 2.95070 3.59237 0.11666 3.49752 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	63 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	64 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	65 16 3.43835 0.12958 3.48758 2.83281 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	66 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	67 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	68 17 3.43835 0.12958 3.48758 2.83281 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	69 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	70 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	71 18 3.43835 0.12958 3.48758 2.83281 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	72 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	73 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	74 19 2.95070 3.59237 0.11666 3.49752 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	75 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	76 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	77 20 3.09320 2.59806 3.14118 0.17794 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	78 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	79 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	80 21 3.09320 2.59806 3.14118 0.17794 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	81 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	82 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	83 22 0.14130 3.38481 2.80488 3.28690 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	84 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	85 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	86 23 2.95070 3.59237 0.11666 3.49752 23 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	87 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	88 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	89 24 3.43835 0.12958 3.48758 2.83281 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	90 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	91 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	92 25 0.14130 3.38481 2.80488 3.28690 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	93 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	94 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	95 26 3.09320 2.59806 3.14118 0.17794 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	96 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	97 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	98 27 2.95070 3.59237 0.11666 3.49752 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	99 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	100 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	101 28 3.09320 2.59806 3.14118 0.17794 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	102 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	103 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	104 29 3.09320 2.59806 3.14118 0.17794 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	105 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	106 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	107 30 3.09320 2.59806 3.14118 0.17794 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	108 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	109 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	110 31 2.95070 3.59237 0.11666 3.49752 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	111 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	112 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	113 32 3.09320 2.59806 3.14118 0.17794 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	114 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	115 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	116 33 3.09320 2.59806 3.14118 0.17794 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	117 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	118 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	119 34 2.95070 3.59237 0.11666 3.49752 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	120 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	121 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	122 35 2.95070 3.59237 0.11666 3.49752 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	123 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	124 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	125 36 0.14130 3.38481 2.80488 3.28690 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	126 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	127 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	128 37 2.95070 3.59237 0.11666 3.49752 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	129 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	130 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	131 38 3.09320 2.59806 3.14118 0.17794 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	132 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	133 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	134 39 2.95070 3.59237 0.11666 3.49752 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	135 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	136 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	137 40 3.09320 2.59806 3.14118 0.17794 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	138 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	139 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	140 41 3.43835 0.12958 3.48758 2.83281 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	141 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	142 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	143 42 3.09320 2.59806 3.14118 0.17794 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	144 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	145 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	146 43 2.95070 3.59237 0.11666 3.49752 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	147 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	148 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	149 44 3.09320 2.59806 3.14118 0.17794 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	150 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	151 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	152 45 3.09320 2.59806 3.14118 0.17794 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	153 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	154 0.01856 3.99580 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	155 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	156 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	157 NAME 2_5.8_Eustigmatophyceae_58S_start_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	158 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	159 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	160 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	161 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	162 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	163 DATE Sun Sep 25 01:34:03 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	164 NSEQ 6
f82c70f54bd7 Uploaded okorol parents: diff changeset	165 EFFN 3.213867
f82c70f54bd7 Uploaded okorol parents: diff changeset	166 CKSUM 1922503689
f82c70f54bd7 Uploaded okorol parents: diff changeset	167 STATS LOCAL MSV -8.1335 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	168 STATS LOCAL VITERBI -7.6652 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	169 STATS LOCAL FORWARD -4.1546 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	170 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	171 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	172 COMPO 1.22065 1.26567 1.52763 1.58055
f82c70f54bd7 Uploaded okorol parents: diff changeset	173 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	174 0.03764 3.99155 3.99155 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	175 1 3.39218 0.13520 3.44336 2.79911 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	176 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	177 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	178 2 0.14667 3.34479 2.77882 3.24311 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	179 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	180 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	181 3 0.14667 3.34479 2.77882 3.24311 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	182 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	183 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	184 4 3.39218 0.13520 3.44336 2.79911 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	185 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	186 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	187 5 3.05294 2.57242 3.10245 0.18453 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	188 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	189 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	190 6 3.05294 2.57242 3.10245 0.18453 6 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	191 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	192 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	193 7 3.05294 2.57242 3.10245 0.18453 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	194 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	195 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	196 8 3.39218 0.13520 3.44336 2.79911 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	197 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	198 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	199 9 0.14667 3.34479 2.77882 3.24311 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	200 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	201 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	202 10 2.92262 3.55163 0.12119 3.45259 10 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	203 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	204 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	205 11 3.39218 0.13520 3.44336 2.79911 11 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	206 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	207 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	208 12 0.14667 3.34479 2.77882 3.24311 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	209 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	210 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	211 13 0.14667 3.34479 2.77882 3.24311 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	212 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	213 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	214 14 3.39218 0.13520 3.44336 2.79911 14 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	215 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	216 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	217 15 2.92262 3.55163 0.12119 3.45259 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	218 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	219 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	220 16 2.92262 3.55163 0.12119 3.45259 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	221 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	222 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	223 17 0.14667 3.34479 2.77882 3.24311 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	224 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	225 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	226 18 3.05294 2.57242 3.10245 0.18453 18 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	227 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	228 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	229 19 2.92262 3.55163 0.12119 3.45259 19 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	230 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	231 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	232 20 3.05294 2.57242 3.10245 0.18453 20 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	233 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	234 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	235 21 3.39218 0.13520 3.44336 2.79911 21 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	236 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	237 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	238 22 3.05294 2.57242 3.10245 0.18453 22 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	239 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	240 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	241 23 3.05294 2.57242 3.10245 0.18453 23 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	242 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	243 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	244 24 2.92262 3.55163 0.12119 3.45259 24 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	245 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	246 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	247 25 2.92262 3.55163 0.12119 3.45259 25 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	248 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	249 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	250 26 3.39218 0.13520 3.44336 2.79911 26 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	251 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	252 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	253 27 3.05294 2.57242 3.10245 0.18453 27 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	254 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	255 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	256 28 3.39218 0.13520 3.44336 2.79911 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	257 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	258 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	259 29 3.39218 0.13520 3.44336 2.79911 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	260 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	261 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	262 30 3.39218 0.13520 3.44336 2.79911 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	263 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	264 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	265 31 0.14667 3.34479 2.77882 3.24311 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	266 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	267 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	268 32 3.39218 0.13520 3.44336 2.79911 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	269 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	270 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	271 33 0.14667 3.34479 2.77882 3.24311 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	272 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	273 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	274 34 0.14667 3.34479 2.77882 3.24311 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	275 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	276 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	277 35 3.39218 0.13520 3.44336 2.79911 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	278 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	279 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	280 36 2.92262 3.55163 0.12119 3.45259 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	281 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	282 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	283 37 0.14667 3.34479 2.77882 3.24311 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	284 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	285 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	286 38 3.05294 2.57242 3.10245 0.18453 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	287 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	288 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	289 39 2.92262 3.55163 0.12119 3.45259 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	290 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	291 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	292 40 0.14667 3.34479 2.77882 3.24311 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	293 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	294 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	295 41 0.14667 3.34479 2.77882 3.24311 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	296 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	297 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	298 42 2.92262 3.55163 0.12119 3.45259 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	299 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	300 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	301 43 0.14667 3.34479 2.77882 3.24311 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	302 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	303 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	304 44 0.14667 3.34479 2.77882 3.24311 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	305 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	306 0.03764 3.99155 3.99155 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	307 45 3.39218 0.13520 3.44336 2.79911 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	308 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	309 0.01900 3.97290 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	310 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	311 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	312 NAME 4_LSU_Eustigmatophyceae_4_LSU_start_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	313 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	314 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	315 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	316 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	317 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	318 DATE Sun Sep 25 01:43:21 2011
f82c70f54bd7 Uploaded okorol parents: diff changeset	319 NSEQ 5
f82c70f54bd7 Uploaded okorol parents: diff changeset	320 EFFN 3.315430
f82c70f54bd7 Uploaded okorol parents: diff changeset	321 CKSUM 2420342418
f82c70f54bd7 Uploaded okorol parents: diff changeset	322 STATS LOCAL MSV -8.0313 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	323 STATS LOCAL VITERBI -7.5738 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	324 STATS LOCAL FORWARD -3.9568 0.71931
f82c70f54bd7 Uploaded okorol parents: diff changeset	325 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	326 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	327 COMPO 1.23266 1.26091 1.60118 1.49866
f82c70f54bd7 Uploaded okorol parents: diff changeset	328 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	329 0.03694 4.01013 4.01013 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	330 1 3.08626 2.59365 3.13451 0.17906 1 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	331 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	332 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	333 2 3.08626 2.59365 3.13451 0.17906 2 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	334 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	335 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	336 3 3.43043 0.13053 3.48000 2.82705 3 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	337 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	338 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	339 4 2.94591 3.58540 0.11742 3.48982 4 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	340 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	341 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	342 5 2.94591 3.58540 0.11742 3.48982 5 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	343 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	344 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	346 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	348 7 3.43043 0.13053 3.48000 2.82705 7 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	349 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	351 8 3.43043 0.13053 3.48000 2.82705 8 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	352 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	353 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	354 9 3.08626 2.59365 3.13451 0.17906 9 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	355 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	356 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	358 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	359 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	361 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	362 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	363 12 0.14220 3.37794 2.80041 3.27938 12 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	364 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	365 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	366 13 0.14220 3.37794 2.80041 3.27938 13 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	367 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	370 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	372 15 3.43043 0.13053 3.48000 2.82705 15 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	373 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	375 16 0.14220 3.37794 2.80041 3.27938 16 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	376 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	377 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	378 17 0.14220 3.37794 2.80041 3.27938 17 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	379 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	418 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	421 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	424 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	427 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	430 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	433 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	436 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	439 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	442 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	445 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	446 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
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f82c70f54bd7 Uploaded okorol parents: diff changeset	448 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	451 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	454 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	455 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	456 43 0.14220 3.37794 2.80041 3.27938 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	457 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	458 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	459 44 3.08626 2.59365 3.13451 0.17906 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	460 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	461 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	462 45 0.14220 3.37794 2.80041 3.27938 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	463 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	464 0.01864 3.99184 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	465 //
f82c70f54bd7 Uploaded okorol parents: diff changeset	466 HMMER3/b [3.0 \| March 2010]
f82c70f54bd7 Uploaded okorol parents: diff changeset	467 NAME 1_SSU_Eustigmatophyceae_1_SSU_end_long
f82c70f54bd7 Uploaded okorol parents: diff changeset	468 LENG 45
f82c70f54bd7 Uploaded okorol parents: diff changeset	469 ALPH DNA
f82c70f54bd7 Uploaded okorol parents: diff changeset	470 RF no
f82c70f54bd7 Uploaded okorol parents: diff changeset	471 CS no
f82c70f54bd7 Uploaded okorol parents: diff changeset	472 MAP yes
f82c70f54bd7 Uploaded okorol parents: diff changeset	473 DATE Thu Jan 19 22:34:10 2012
f82c70f54bd7 Uploaded okorol parents: diff changeset	474 NSEQ 6
f82c70f54bd7 Uploaded okorol parents: diff changeset	475 EFFN 3.225586
f82c70f54bd7 Uploaded okorol parents: diff changeset	476 CKSUM 778367950
f82c70f54bd7 Uploaded okorol parents: diff changeset	477 STATS LOCAL MSV -8.0048 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	478 STATS LOCAL VITERBI -7.6831 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	479 STATS LOCAL FORWARD -4.1090 0.71933
f82c70f54bd7 Uploaded okorol parents: diff changeset	480 HMM A C G T
f82c70f54bd7 Uploaded okorol parents: diff changeset	481 m->m m->i m->d i->m i->i d->m d->d
f82c70f54bd7 Uploaded okorol parents: diff changeset	482 COMPO 1.27189 1.62645 1.24659 1.44567
f82c70f54bd7 Uploaded okorol parents: diff changeset	483 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	484 0.03756 3.99371 3.99371 1.46634 0.26236 0.00000 *
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f82c70f54bd7 Uploaded okorol parents: diff changeset	498 1.38629 1.38629 1.38629 1.38629
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f82c70f54bd7 Uploaded okorol parents: diff changeset	565 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	566 28 3.39667 0.13464 3.44765 2.80239 28 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	567 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	568 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	569 29 3.39667 0.13464 3.44765 2.80239 29 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	570 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	571 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	572 30 3.05683 2.57491 3.10619 0.18389 30 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	573 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	574 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	575 31 2.92536 3.55560 0.12074 3.45696 31 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	576 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	577 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	578 32 3.39667 0.13464 3.44765 2.80239 32 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	579 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	580 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	581 33 2.92536 3.55560 0.12074 3.45696 33 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	582 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	583 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	584 34 2.92536 3.55560 0.12074 3.45696 34 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	585 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	586 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	587 35 0.14614 3.34867 2.78135 3.24736 35 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	588 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	589 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	590 36 0.14614 3.34867 2.78135 3.24736 36 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	591 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	592 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	593 37 2.92536 3.55560 0.12074 3.45696 37 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	594 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	595 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	596 38 2.92536 3.55560 0.12074 3.45696 38 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	597 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	598 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	599 39 0.14614 3.34867 2.78135 3.24736 39 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	600 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	601 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	602 40 3.05683 2.57491 3.10619 0.18389 40 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	603 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	604 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	605 41 3.39667 0.13464 3.44765 2.80239 41 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	606 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	607 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	608 42 0.14614 3.34867 2.78135 3.24736 42 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	609 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	610 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	611 43 3.05683 2.57491 3.10619 0.18389 43 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	612 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	613 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	614 44 3.05683 2.57491 3.10619 0.18389 44 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	615 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	616 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
f82c70f54bd7 Uploaded okorol parents: diff changeset	617 45 0.14614 3.34867 2.78135 3.24736 45 - -
f82c70f54bd7 Uploaded okorol parents: diff changeset	618 1.38629 1.38629 1.38629 1.38629
f82c70f54bd7 Uploaded okorol parents: diff changeset	619 0.01896 3.97511 * 1.46634 0.26236 0.00000 *
f82c70f54bd7 Uploaded okorol parents: diff changeset	620 //

Mercurial > repos > okorol > itsx

annotate ITSx_db/HMMs/U.hmm @ 9:3610c6312b85 draft default tip