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comparison ITSx.xml @ 8:88ea67da0d99 draft

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author okorol
date Fri, 05 Jun 2015 11:27:39 -0400
parents d74a601111f2
children 3610c6312b85
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7:d74a601111f2 8:88ea67da0d99
3 <description> 3 <description>
4 ITSx -- Identifies ITS sequences and extracts the ITS region 4 ITSx -- Identifies ITS sequences and extracts the ITS region
5 </description> 5 </description>
6 6
7 <command interpreter="perl"> 7 <command interpreter="perl">
8 ITSx -i $input --detailed_results T -N $domain_num $preserve $reset 8 ITSx -i $input --detailed_results T -N $domain_num --cpu=\${NSLOTS:1} $preserve $reset
9 #if "${NSLOTS}"=="":
10 --cpu=4
11 #else:
12 --cpu="${NSLOTS}"
13 #end if
14
15 9
16 </command> 10 </command>
17 <requirements> 11 <requirements>
18 <requirement type="package" version="3.1b1">hmmer</requirement> 12 <requirement type="package" version="3.1b1">hmmer</requirement>
19 </requirements> 13 </requirements>