Mercurial > repos > okorol > itsx
comparison ITSx_db/HMMs/A.hmm @ 0:f82c70f54bd7 draft
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author | okorol |
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date | Tue, 24 Mar 2015 12:02:48 -0400 |
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-1:000000000000 | 0:f82c70f54bd7 |
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1 HMMER3/b [3.0 | March 2010] | |
2 NAME 3_End_Alveolata_58S_end_eighta_long | |
3 LENG 45 | |
4 ALPH DNA | |
5 RF no | |
6 CS no | |
7 MAP yes | |
8 DATE Wed Feb 29 22:48:49 2012 | |
9 NSEQ 2 | |
10 EFFN 2.000000 | |
11 CKSUM 875354829 | |
12 STATS LOCAL MSV -7.4772 0.72750 | |
13 STATS LOCAL VITERBI -8.4131 0.72750 | |
14 STATS LOCAL FORWARD -3.2493 0.72750 | |
15 HMM A C G T | |
16 m->m m->i m->d i->m i->i d->m d->d | |
17 COMPO 2.02810 1.19053 1.12475 1.42869 | |
18 1.38629 1.38629 1.38629 1.38629 | |
19 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
20 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
21 1.38629 1.38629 1.38629 1.38629 | |
22 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
23 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
24 1.38629 1.38629 1.38629 1.38629 | |
25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
26 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
27 1.38629 1.38629 1.38629 1.38629 | |
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
29 4 2.53331 3.02441 0.20344 2.88069 4 - - | |
30 1.38629 1.38629 1.38629 1.38629 | |
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
32 5 2.81865 0.23582 2.88868 2.35662 5 - - | |
33 1.38629 1.38629 1.38629 1.38629 | |
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
35 6 2.81865 0.23582 2.88868 2.35662 6 - - | |
36 1.38629 1.38629 1.38629 1.38629 | |
37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
38 7 2.53331 3.02441 0.20344 2.88069 7 - - | |
39 1.38629 1.38629 1.38629 1.38629 | |
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
41 8 2.57915 2.25909 2.64442 0.28946 8 - - | |
42 1.38629 1.38629 1.38629 1.38629 | |
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
44 9 0.23862 2.84929 2.43386 2.70756 9 - - | |
45 1.38629 1.38629 1.38629 1.38629 | |
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
47 10 2.81865 0.23582 2.88868 2.35662 10 - - | |
48 1.38629 1.38629 1.38629 1.38629 | |
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
50 11 2.53331 3.02441 0.20344 2.88069 11 - - | |
51 1.38629 1.38629 1.38629 1.38629 | |
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
53 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
54 1.38629 1.38629 1.38629 1.38629 | |
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
56 13 2.57915 2.25909 2.64442 0.28946 13 - - | |
57 1.38629 1.38629 1.38629 1.38629 | |
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
59 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
60 1.38629 1.38629 1.38629 1.38629 | |
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
62 15 2.81865 0.23582 2.88868 2.35662 15 - - | |
63 1.38629 1.38629 1.38629 1.38629 | |
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
65 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
66 1.38629 1.38629 1.38629 1.38629 | |
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
68 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
69 1.38629 1.38629 1.38629 1.38629 | |
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
71 18 2.81865 0.23582 2.88868 2.35662 18 - - | |
72 1.38629 1.38629 1.38629 1.38629 | |
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
74 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
75 1.38629 1.38629 1.38629 1.38629 | |
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
77 20 2.57915 2.25909 2.64442 0.28946 20 - - | |
78 1.38629 1.38629 1.38629 1.38629 | |
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
80 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
81 1.38629 1.38629 1.38629 1.38629 | |
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
83 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
84 1.38629 1.38629 1.38629 1.38629 | |
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
86 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
87 1.38629 1.38629 1.38629 1.38629 | |
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
89 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
90 1.38629 1.38629 1.38629 1.38629 | |
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
92 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
93 1.38629 1.38629 1.38629 1.38629 | |
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
95 26 2.81865 0.23582 2.88868 2.35662 26 - - | |
96 1.38629 1.38629 1.38629 1.38629 | |
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
98 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
99 1.38629 1.38629 1.38629 1.38629 | |
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
101 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
102 1.38629 1.38629 1.38629 1.38629 | |
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
104 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
105 1.38629 1.38629 1.38629 1.38629 | |
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
107 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
108 1.38629 1.38629 1.38629 1.38629 | |
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
110 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
111 1.38629 1.38629 1.38629 1.38629 | |
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
113 32 2.53331 3.02441 0.20344 2.88069 32 - - | |
114 1.38629 1.38629 1.38629 1.38629 | |
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
116 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
117 1.38629 1.38629 1.38629 1.38629 | |
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
119 34 2.81865 0.23582 2.88868 2.35662 34 - - | |
120 1.38629 1.38629 1.38629 1.38629 | |
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
122 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
123 1.38629 1.38629 1.38629 1.38629 | |
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
125 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
126 1.38629 1.38629 1.38629 1.38629 | |
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
128 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
129 1.38629 1.38629 1.38629 1.38629 | |
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
131 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
132 1.38629 1.38629 1.38629 1.38629 | |
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
134 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
135 1.38629 1.38629 1.38629 1.38629 | |
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
137 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
138 1.38629 1.38629 1.38629 1.38629 | |
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
140 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
141 1.38629 1.38629 1.38629 1.38629 | |
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
143 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
144 1.38629 1.38629 1.38629 1.38629 | |
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
146 43 2.57915 2.25909 2.64442 0.28946 43 - - | |
147 1.38629 1.38629 1.38629 1.38629 | |
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
149 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
150 1.38629 1.38629 1.38629 1.38629 | |
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
152 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
153 1.38629 1.38629 1.38629 1.38629 | |
154 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
155 // | |
156 HMMER3/b [3.0 | March 2010] | |
157 NAME 3_End_Alveolata_58S_end_eightb_long | |
158 LENG 45 | |
159 ALPH DNA | |
160 RF no | |
161 CS no | |
162 MAP yes | |
163 DATE Wed Feb 29 22:48:56 2012 | |
164 NSEQ 5 | |
165 EFFN 3.334961 | |
166 CKSUM 2194532692 | |
167 STATS LOCAL MSV -8.0757 0.71931 | |
168 STATS LOCAL VITERBI -7.9285 0.71931 | |
169 STATS LOCAL FORWARD -3.6374 0.71931 | |
170 HMM A C G T | |
171 m->m m->i m->d i->m i->i d->m d->d | |
172 COMPO 2.20861 1.12285 1.26075 1.26814 | |
173 1.38629 1.38629 1.38629 1.38629 | |
174 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 * | |
175 1 2.95026 3.59174 0.11672 3.49682 1 - - | |
176 1.38629 1.38629 1.38629 1.38629 | |
177 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
178 2 3.43763 0.12967 3.48690 2.83229 2 - - | |
179 1.38629 1.38629 1.38629 1.38629 | |
180 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
181 3 2.95026 3.59174 0.11672 3.49682 3 - - | |
182 1.38629 1.38629 1.38629 1.38629 | |
183 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
184 4 3.43763 0.12967 3.48690 2.83229 4 - - | |
185 1.38629 1.38629 1.38629 1.38629 | |
186 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
187 5 3.43763 0.12967 3.48690 2.83229 5 - - | |
188 1.38629 1.38629 1.38629 1.38629 | |
189 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
190 6 2.95026 3.59174 0.11672 3.49682 6 - - | |
191 1.38629 1.38629 1.38629 1.38629 | |
192 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
193 7 2.95026 3.59174 0.11672 3.49682 7 - - | |
194 1.38629 1.38629 1.38629 1.38629 | |
195 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
196 8 3.43763 0.12967 3.48690 2.83229 8 - - | |
197 1.38629 1.38629 1.38629 1.38629 | |
198 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
199 9 3.09257 2.59766 3.14057 0.17804 9 - - | |
200 1.38629 1.38629 1.38629 1.38629 | |
201 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
202 10 2.95026 3.59174 0.11672 3.49682 10 - - | |
203 1.38629 1.38629 1.38629 1.38629 | |
204 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
205 11 2.95026 3.59174 0.11672 3.49682 11 - - | |
206 1.38629 1.38629 1.38629 1.38629 | |
207 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
208 12 3.43763 0.12967 3.48690 2.83229 12 - - | |
209 1.38629 1.38629 1.38629 1.38629 | |
210 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
211 13 2.44734 1.18879 2.51771 0.63820 13 - - | |
212 1.38629 1.38629 1.38629 1.38629 | |
213 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
214 14 3.43763 0.12967 3.48690 2.83229 14 - - | |
215 1.38629 1.38629 1.38629 1.38629 | |
216 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
217 15 3.09257 2.59766 3.14057 0.17804 15 - - | |
218 1.38629 1.38629 1.38629 1.38629 | |
219 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
220 16 3.43763 0.12967 3.48690 2.83229 16 - - | |
221 1.38629 1.38629 1.38629 1.38629 | |
222 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
223 17 3.43763 0.12967 3.48690 2.83229 17 - - | |
224 1.38629 1.38629 1.38629 1.38629 | |
225 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
226 18 0.14138 3.38419 2.80447 3.28622 18 - - | |
227 1.38629 1.38629 1.38629 1.38629 | |
228 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
229 19 2.95026 3.59174 0.11672 3.49682 19 - - | |
230 1.38629 1.38629 1.38629 1.38629 | |
231 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
232 20 3.43763 0.12967 3.48690 2.83229 20 - - | |
233 1.38629 1.38629 1.38629 1.38629 | |
234 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
235 21 3.43763 0.12967 3.48690 2.83229 21 - - | |
236 1.38629 1.38629 1.38629 1.38629 | |
237 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
238 22 2.95026 3.59174 0.11672 3.49682 22 - - | |
239 1.38629 1.38629 1.38629 1.38629 | |
240 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
241 23 2.95026 3.59174 0.11672 3.49682 23 - - | |
242 1.38629 1.38629 1.38629 1.38629 | |
243 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
244 24 3.43763 0.12967 3.48690 2.83229 24 - - | |
245 1.38629 1.38629 1.38629 1.38629 | |
246 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
247 25 0.14138 3.38419 2.80447 3.28622 25 - - | |
248 1.38629 1.38629 1.38629 1.38629 | |
249 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
250 26 3.09257 2.59766 3.14057 0.17804 26 - - | |
251 1.38629 1.38629 1.38629 1.38629 | |
252 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
253 27 2.95026 3.59174 0.11672 3.49682 27 - - | |
254 1.38629 1.38629 1.38629 1.38629 | |
255 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
256 28 3.43763 0.12967 3.48690 2.83229 28 - - | |
257 1.38629 1.38629 1.38629 1.38629 | |
258 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
259 29 3.09257 2.59766 3.14057 0.17804 29 - - | |
260 1.38629 1.38629 1.38629 1.38629 | |
261 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
262 30 3.09257 2.59766 3.14057 0.17804 30 - - | |
263 1.38629 1.38629 1.38629 1.38629 | |
264 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
265 31 2.95026 3.59174 0.11672 3.49682 31 - - | |
266 1.38629 1.38629 1.38629 1.38629 | |
267 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
268 32 3.09257 2.59766 3.14057 0.17804 32 - - | |
269 1.38629 1.38629 1.38629 1.38629 | |
270 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
271 33 3.09257 2.59766 3.14057 0.17804 33 - - | |
272 1.38629 1.38629 1.38629 1.38629 | |
273 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
274 34 3.09257 2.59766 3.14057 0.17804 34 - - | |
275 1.38629 1.38629 1.38629 1.38629 | |
276 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
277 35 3.43763 0.12967 3.48690 2.83229 35 - - | |
278 1.38629 1.38629 1.38629 1.38629 | |
279 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
280 36 0.14138 3.38419 2.80447 3.28622 36 - - | |
281 1.38629 1.38629 1.38629 1.38629 | |
282 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
283 37 2.95026 3.59174 0.11672 3.49682 37 - - | |
284 1.38629 1.38629 1.38629 1.38629 | |
285 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
286 38 3.09257 2.59766 3.14057 0.17804 38 - - | |
287 1.38629 1.38629 1.38629 1.38629 | |
288 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
289 39 2.95026 3.59174 0.11672 3.49682 39 - - | |
290 1.38629 1.38629 1.38629 1.38629 | |
291 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
292 40 3.09257 2.59766 3.14057 0.17804 40 - - | |
293 1.38629 1.38629 1.38629 1.38629 | |
294 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
295 41 3.43763 0.12967 3.48690 2.83229 41 - - | |
296 1.38629 1.38629 1.38629 1.38629 | |
297 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
298 42 3.09257 2.59766 3.14057 0.17804 42 - - | |
299 1.38629 1.38629 1.38629 1.38629 | |
300 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
301 43 3.43763 0.12967 3.48690 2.83229 43 - - | |
302 1.38629 1.38629 1.38629 1.38629 | |
303 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
304 44 3.09257 2.59766 3.14057 0.17804 44 - - | |
305 1.38629 1.38629 1.38629 1.38629 | |
306 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 | |
307 45 3.09257 2.59766 3.14057 0.17804 45 - - | |
308 1.38629 1.38629 1.38629 1.38629 | |
309 0.01857 3.99544 * 1.46634 0.26236 0.00000 * | |
310 // | |
311 HMMER3/b [3.0 | March 2010] | |
312 NAME 3_End_Alveolata_58S_end_eightc_long | |
313 LENG 45 | |
314 ALPH DNA | |
315 RF no | |
316 CS no | |
317 MAP yes | |
318 DATE Wed Feb 29 22:49:01 2012 | |
319 NSEQ 5 | |
320 EFFN 3.686523 | |
321 CKSUM 4049282212 | |
322 STATS LOCAL MSV -7.6145 0.71933 | |
323 STATS LOCAL VITERBI -7.6391 0.71933 | |
324 STATS LOCAL FORWARD -3.8726 0.71933 | |
325 HMM A C G T | |
326 m->m m->i m->d i->m i->i d->m d->d | |
327 COMPO 1.75248 1.41803 1.36097 1.11458 | |
328 1.38629 1.38629 1.38629 1.38629 | |
329 0.03457 4.07525 4.07525 1.46634 0.26236 0.00000 * | |
330 1 0.12822 3.48998 2.87277 3.40223 1 - - | |
331 1.38629 1.38629 1.38629 1.38629 | |
332 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
333 2 3.55903 0.11614 3.60298 2.91981 2 - - | |
334 1.38629 1.38629 1.38629 1.38629 | |
335 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
336 3 0.12822 3.48998 2.87277 3.40223 3 - - | |
337 1.38629 1.38629 1.38629 1.38629 | |
338 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
339 4 3.55903 0.11614 3.60298 2.91981 4 - - | |
340 1.38629 1.38629 1.38629 1.38629 | |
341 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
342 5 3.55903 0.11614 3.60298 2.91981 5 - - | |
343 1.38629 1.38629 1.38629 1.38629 | |
344 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
345 6 3.02261 3.69787 0.10579 3.61425 6 - - | |
346 1.38629 1.38629 1.38629 1.38629 | |
347 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
348 7 3.02261 3.69787 0.10579 3.61425 7 - - | |
349 1.38629 1.38629 1.38629 1.38629 | |
350 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
351 8 0.12822 3.48998 2.87277 3.40223 8 - - | |
352 1.38629 1.38629 1.38629 1.38629 | |
353 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
354 9 3.02261 3.69787 0.10579 3.61425 9 - - | |
355 1.38629 1.38629 1.38629 1.38629 | |
356 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
357 10 0.63103 2.61772 1.16807 2.47669 10 - - | |
358 1.38629 1.38629 1.38629 1.38629 | |
359 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
360 11 3.02261 3.69787 0.10579 3.61425 11 - - | |
361 1.38629 1.38629 1.38629 1.38629 | |
362 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
363 12 3.20077 2.66632 3.24458 0.16161 12 - - | |
364 1.38629 1.38629 1.38629 1.38629 | |
365 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
366 13 1.57289 1.57364 2.19918 0.74577 13 - - | |
367 1.38629 1.38629 1.38629 1.38629 | |
368 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
369 14 3.55903 0.11614 3.60298 2.91981 14 - - | |
370 1.38629 1.38629 1.38629 1.38629 | |
371 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
372 15 3.20077 2.66632 3.24458 0.16161 15 - - | |
373 1.38629 1.38629 1.38629 1.38629 | |
374 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
375 16 3.55903 0.11614 3.60298 2.91981 16 - - | |
376 1.38629 1.38629 1.38629 1.38629 | |
377 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
378 17 2.76133 1.72287 2.82248 0.35842 17 - - | |
379 1.38629 1.38629 1.38629 1.38629 | |
380 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
381 18 3.55903 0.11614 3.60298 2.91981 18 - - | |
382 1.38629 1.38629 1.38629 1.38629 | |
383 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
384 19 3.20077 2.66632 3.24458 0.16161 19 - - | |
385 1.38629 1.38629 1.38629 1.38629 | |
386 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
387 20 3.20077 2.66632 3.24458 0.16161 20 - - | |
388 1.38629 1.38629 1.38629 1.38629 | |
389 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
390 21 3.55903 0.11614 3.60298 2.91981 21 - - | |
391 1.38629 1.38629 1.38629 1.38629 | |
392 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
393 22 3.02261 3.69787 0.10579 3.61425 22 - - | |
394 1.38629 1.38629 1.38629 1.38629 | |
395 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
396 23 3.02261 3.69787 0.10579 3.61425 23 - - | |
397 1.38629 1.38629 1.38629 1.38629 | |
398 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
399 24 3.20077 2.66632 3.24458 0.16161 24 - - | |
400 1.38629 1.38629 1.38629 1.38629 | |
401 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
402 25 0.12822 3.48998 2.87277 3.40223 25 - - | |
403 1.38629 1.38629 1.38629 1.38629 | |
404 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
405 26 3.20077 2.66632 3.24458 0.16161 26 - - | |
406 1.38629 1.38629 1.38629 1.38629 | |
407 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
408 27 3.02261 3.69787 0.10579 3.61425 27 - - | |
409 1.38629 1.38629 1.38629 1.38629 | |
410 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
411 28 3.55903 0.11614 3.60298 2.91981 28 - - | |
412 1.38629 1.38629 1.38629 1.38629 | |
413 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
414 29 3.20077 2.66632 3.24458 0.16161 29 - - | |
415 1.38629 1.38629 1.38629 1.38629 | |
416 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
417 30 3.20077 2.66632 3.24458 0.16161 30 - - | |
418 1.38629 1.38629 1.38629 1.38629 | |
419 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
420 31 3.55903 0.11614 3.60298 2.91981 31 - - | |
421 1.38629 1.38629 1.38629 1.38629 | |
422 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
423 32 3.20077 2.66632 3.24458 0.16161 32 - - | |
424 1.38629 1.38629 1.38629 1.38629 | |
425 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
426 33 3.20077 2.66632 3.24458 0.16161 33 - - | |
427 1.38629 1.38629 1.38629 1.38629 | |
428 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
429 34 3.20077 2.66632 3.24458 0.16161 34 - - | |
430 1.38629 1.38629 1.38629 1.38629 | |
431 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
432 35 3.55903 0.11614 3.60298 2.91981 35 - - | |
433 1.38629 1.38629 1.38629 1.38629 | |
434 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
435 36 0.12822 3.48998 2.87277 3.40223 36 - - | |
436 1.38629 1.38629 1.38629 1.38629 | |
437 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
438 37 3.02261 3.69787 0.10579 3.61425 37 - - | |
439 1.38629 1.38629 1.38629 1.38629 | |
440 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
441 38 3.20077 2.66632 3.24458 0.16161 38 - - | |
442 1.38629 1.38629 1.38629 1.38629 | |
443 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
444 39 3.02261 3.69787 0.10579 3.61425 39 - - | |
445 1.38629 1.38629 1.38629 1.38629 | |
446 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
447 40 3.20077 2.66632 3.24458 0.16161 40 - - | |
448 1.38629 1.38629 1.38629 1.38629 | |
449 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
450 41 3.02261 3.69787 0.10579 3.61425 41 - - | |
451 1.38629 1.38629 1.38629 1.38629 | |
452 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
453 42 3.20077 2.66632 3.24458 0.16161 42 - - | |
454 1.38629 1.38629 1.38629 1.38629 | |
455 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
456 43 3.02261 3.69787 0.10579 3.61425 43 - - | |
457 1.38629 1.38629 1.38629 1.38629 | |
458 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
459 44 0.12822 3.48998 2.87277 3.40223 44 - - | |
460 1.38629 1.38629 1.38629 1.38629 | |
461 0.03457 4.07525 4.07525 1.46634 0.26236 1.09861 0.40547 | |
462 45 3.20077 2.66632 3.24458 0.16161 45 - - | |
463 1.38629 1.38629 1.38629 1.38629 | |
464 0.01743 4.05812 * 1.46634 0.26236 0.00000 * | |
465 // | |
466 HMMER3/b [3.0 | March 2010] | |
467 NAME 3_End_Alveolata_58S_end_eightd_long | |
468 LENG 45 | |
469 ALPH DNA | |
470 RF no | |
471 CS no | |
472 MAP yes | |
473 DATE Wed Feb 29 22:49:07 2012 | |
474 NSEQ 2 | |
475 EFFN 2.000000 | |
476 CKSUM 1872219876 | |
477 STATS LOCAL MSV -7.3853 0.72989 | |
478 STATS LOCAL VITERBI -8.4090 0.72989 | |
479 STATS LOCAL FORWARD -3.4944 0.72989 | |
480 HMM A C G T | |
481 m->m m->i m->d i->m i->i d->m d->d | |
482 COMPO 1.71692 1.44276 1.18984 1.27355 | |
483 1.38629 1.38629 1.38629 1.38629 | |
484 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
485 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
486 1.38629 1.38629 1.38629 1.38629 | |
487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
488 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
489 1.38629 1.38629 1.38629 1.38629 | |
490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
491 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
492 1.38629 1.38629 1.38629 1.38629 | |
493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
494 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
495 1.38629 1.38629 1.38629 1.38629 | |
496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
497 5 2.81865 0.23582 2.88868 2.35662 5 - - | |
498 1.38629 1.38629 1.38629 1.38629 | |
499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
500 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
501 1.38629 1.38629 1.38629 1.38629 | |
502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
503 7 0.23862 2.84929 2.43386 2.70756 7 - - | |
504 1.38629 1.38629 1.38629 1.38629 | |
505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
506 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
507 1.38629 1.38629 1.38629 1.38629 | |
508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
509 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
510 1.38629 1.38629 1.38629 1.38629 | |
511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
512 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
513 1.38629 1.38629 1.38629 1.38629 | |
514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
515 11 2.53331 3.02441 0.20344 2.88069 11 - - | |
516 1.38629 1.38629 1.38629 1.38629 | |
517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
518 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
519 1.38629 1.38629 1.38629 1.38629 | |
520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
521 13 2.57915 2.25909 2.64442 0.28946 13 - - | |
522 1.38629 1.38629 1.38629 1.38629 | |
523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
524 14 0.23862 2.84929 2.43386 2.70756 14 - - | |
525 1.38629 1.38629 1.38629 1.38629 | |
526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
527 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
528 1.38629 1.38629 1.38629 1.38629 | |
529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
530 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
531 1.38629 1.38629 1.38629 1.38629 | |
532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
533 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
534 1.38629 1.38629 1.38629 1.38629 | |
535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
536 18 2.81865 0.23582 2.88868 2.35662 18 - - | |
537 1.38629 1.38629 1.38629 1.38629 | |
538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
539 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
540 1.38629 1.38629 1.38629 1.38629 | |
541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
542 20 2.57915 2.25909 2.64442 0.28946 20 - - | |
543 1.38629 1.38629 1.38629 1.38629 | |
544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
545 21 1.88179 1.10717 1.04597 1.79675 21 - - | |
546 1.38629 1.38629 1.38629 1.38629 | |
547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
548 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
549 1.38629 1.38629 1.38629 1.38629 | |
550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
551 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
552 1.38629 1.38629 1.38629 1.38629 | |
553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
554 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
555 1.38629 1.38629 1.38629 1.38629 | |
556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
557 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
558 1.38629 1.38629 1.38629 1.38629 | |
559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
560 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
561 1.38629 1.38629 1.38629 1.38629 | |
562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
563 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
564 1.38629 1.38629 1.38629 1.38629 | |
565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
566 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
567 1.38629 1.38629 1.38629 1.38629 | |
568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
569 29 2.15554 1.00938 2.23102 0.88601 29 - - | |
570 1.38629 1.38629 1.38629 1.38629 | |
571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
572 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
573 1.38629 1.38629 1.38629 1.38629 | |
574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
575 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
576 1.38629 1.38629 1.38629 1.38629 | |
577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
578 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
579 1.38629 1.38629 1.38629 1.38629 | |
580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
581 33 2.15554 1.00938 2.23102 0.88601 33 - - | |
582 1.38629 1.38629 1.38629 1.38629 | |
583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
584 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
585 1.38629 1.38629 1.38629 1.38629 | |
586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
587 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
588 1.38629 1.38629 1.38629 1.38629 | |
589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
590 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
591 1.38629 1.38629 1.38629 1.38629 | |
592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
593 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
594 1.38629 1.38629 1.38629 1.38629 | |
595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
596 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
597 1.38629 1.38629 1.38629 1.38629 | |
598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
599 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
600 1.38629 1.38629 1.38629 1.38629 | |
601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
602 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
603 1.38629 1.38629 1.38629 1.38629 | |
604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
605 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
606 1.38629 1.38629 1.38629 1.38629 | |
607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
608 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
609 1.38629 1.38629 1.38629 1.38629 | |
610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
611 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
612 1.38629 1.38629 1.38629 1.38629 | |
613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
614 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
615 1.38629 1.38629 1.38629 1.38629 | |
616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
617 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
618 1.38629 1.38629 1.38629 1.38629 | |
619 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
620 // | |
621 HMMER3/b [3.0 | March 2010] | |
622 NAME 3_End_Alveolata_58S_end_elevena_long | |
623 LENG 45 | |
624 ALPH DNA | |
625 RF no | |
626 CS no | |
627 MAP yes | |
628 DATE Wed Feb 29 22:49:27 2012 | |
629 NSEQ 5 | |
630 EFFN 3.393555 | |
631 CKSUM 1575714051 | |
632 STATS LOCAL MSV -7.4839 0.71934 | |
633 STATS LOCAL VITERBI -7.6990 0.71934 | |
634 STATS LOCAL FORWARD -4.2620 0.71934 | |
635 HMM A C G T | |
636 m->m m->i m->d i->m i->i d->m d->d | |
637 COMPO 1.55028 1.30282 1.33321 1.37666 | |
638 1.38629 1.38629 1.38629 1.38629 | |
639 0.03641 4.02420 4.02420 1.46634 0.26236 0.00000 * | |
640 1 2.68973 1.71652 2.75247 0.37304 1 - - | |
641 1.38629 1.38629 1.38629 1.38629 | |
642 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
643 2 2.96311 3.61046 0.11471 3.51750 2 - - | |
644 1.38629 1.38629 1.38629 1.38629 | |
645 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
646 3 3.45893 0.12717 3.50729 2.84776 3 - - | |
647 1.38629 1.38629 1.38629 1.38629 | |
648 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
649 4 3.45893 0.12717 3.50729 2.84776 4 - - | |
650 1.38629 1.38629 1.38629 1.38629 | |
651 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
652 5 3.45893 0.12717 3.50729 2.84776 5 - - | |
653 1.38629 1.38629 1.38629 1.38629 | |
654 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
655 6 3.11130 2.60957 3.15859 0.17506 6 - - | |
656 1.38629 1.38629 1.38629 1.38629 | |
657 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
658 7 3.11130 2.60957 3.15859 0.17506 7 - - | |
659 1.38629 1.38629 1.38629 1.38629 | |
660 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
661 8 2.96311 3.61046 0.11471 3.51750 8 - - | |
662 1.38629 1.38629 1.38629 1.38629 | |
663 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
664 9 2.96311 3.61046 0.11471 3.51750 9 - - | |
665 1.38629 1.38629 1.38629 1.38629 | |
666 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
667 10 2.96311 3.61046 0.11471 3.51750 10 - - | |
668 1.38629 1.38629 1.38629 1.38629 | |
669 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
670 11 3.45893 0.12717 3.50729 2.84776 11 - - | |
671 1.38629 1.38629 1.38629 1.38629 | |
672 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
673 12 3.45893 0.12717 3.50729 2.84776 12 - - | |
674 1.38629 1.38629 1.38629 1.38629 | |
675 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
676 13 0.13897 3.40269 2.81647 3.30648 13 - - | |
677 1.38629 1.38629 1.38629 1.38629 | |
678 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
679 14 3.45893 0.12717 3.50729 2.84776 14 - - | |
680 1.38629 1.38629 1.38629 1.38629 | |
681 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
682 15 3.11130 2.60957 3.15859 0.17506 15 - - | |
683 1.38629 1.38629 1.38629 1.38629 | |
684 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
685 16 3.45893 0.12717 3.50729 2.84776 16 - - | |
686 1.38629 1.38629 1.38629 1.38629 | |
687 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
688 17 3.45893 0.12717 3.50729 2.84776 17 - - | |
689 1.38629 1.38629 1.38629 1.38629 | |
690 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
691 18 3.45893 0.12717 3.50729 2.84776 18 - - | |
692 1.38629 1.38629 1.38629 1.38629 | |
693 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
694 19 0.13897 3.40269 2.81647 3.30648 19 - - | |
695 1.38629 1.38629 1.38629 1.38629 | |
696 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
697 20 0.13897 3.40269 2.81647 3.30648 20 - - | |
698 1.38629 1.38629 1.38629 1.38629 | |
699 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
700 21 3.11130 2.60957 3.15859 0.17506 21 - - | |
701 1.38629 1.38629 1.38629 1.38629 | |
702 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
703 22 2.96311 3.61046 0.11471 3.51750 22 - - | |
704 1.38629 1.38629 1.38629 1.38629 | |
705 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
706 23 2.96311 3.61046 0.11471 3.51750 23 - - | |
707 1.38629 1.38629 1.38629 1.38629 | |
708 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
709 24 3.11130 2.60957 3.15859 0.17506 24 - - | |
710 1.38629 1.38629 1.38629 1.38629 | |
711 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
712 25 2.37392 1.92307 0.39398 2.44920 25 - - | |
713 1.38629 1.38629 1.38629 1.38629 | |
714 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
715 26 3.11130 2.60957 3.15859 0.17506 26 - - | |
716 1.38629 1.38629 1.38629 1.38629 | |
717 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
718 27 2.96311 3.61046 0.11471 3.51750 27 - - | |
719 1.38629 1.38629 1.38629 1.38629 | |
720 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
721 28 3.45893 0.12717 3.50729 2.84776 28 - - | |
722 1.38629 1.38629 1.38629 1.38629 | |
723 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
724 29 3.11130 2.60957 3.15859 0.17506 29 - - | |
725 1.38629 1.38629 1.38629 1.38629 | |
726 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
727 30 2.96311 3.61046 0.11471 3.51750 30 - - | |
728 1.38629 1.38629 1.38629 1.38629 | |
729 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
730 31 3.45893 0.12717 3.50729 2.84776 31 - - | |
731 1.38629 1.38629 1.38629 1.38629 | |
732 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
733 32 0.13897 3.40269 2.81647 3.30648 32 - - | |
734 1.38629 1.38629 1.38629 1.38629 | |
735 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
736 33 3.11130 2.60957 3.15859 0.17506 33 - - | |
737 1.38629 1.38629 1.38629 1.38629 | |
738 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
739 34 3.11130 2.60957 3.15859 0.17506 34 - - | |
740 1.38629 1.38629 1.38629 1.38629 | |
741 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
742 35 3.11130 2.60957 3.15859 0.17506 35 - - | |
743 1.38629 1.38629 1.38629 1.38629 | |
744 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
745 36 2.96311 3.61046 0.11471 3.51750 36 - - | |
746 1.38629 1.38629 1.38629 1.38629 | |
747 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
748 37 0.13897 3.40269 2.81647 3.30648 37 - - | |
749 1.38629 1.38629 1.38629 1.38629 | |
750 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
751 38 0.13897 3.40269 2.81647 3.30648 38 - - | |
752 1.38629 1.38629 1.38629 1.38629 | |
753 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
754 39 0.13897 3.40269 2.81647 3.30648 39 - - | |
755 1.38629 1.38629 1.38629 1.38629 | |
756 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
757 40 3.45893 0.12717 3.50729 2.84776 40 - - | |
758 1.38629 1.38629 1.38629 1.38629 | |
759 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
760 41 0.13897 3.40269 2.81647 3.30648 41 - - | |
761 1.38629 1.38629 1.38629 1.38629 | |
762 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
763 42 2.96311 3.61046 0.11471 3.51750 42 - - | |
764 1.38629 1.38629 1.38629 1.38629 | |
765 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
766 43 0.13897 3.40269 2.81647 3.30648 43 - - | |
767 1.38629 1.38629 1.38629 1.38629 | |
768 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
769 44 3.11130 2.60957 3.15859 0.17506 44 - - | |
770 1.38629 1.38629 1.38629 1.38629 | |
771 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 | |
772 45 2.96311 3.61046 0.11471 3.51750 45 - - | |
773 1.38629 1.38629 1.38629 1.38629 | |
774 0.01837 4.00616 * 1.46634 0.26236 0.00000 * | |
775 // | |
776 HMMER3/b [3.0 | March 2010] | |
777 NAME 3_End_Alveolata_58S_end_elevenb_long | |
778 LENG 45 | |
779 ALPH DNA | |
780 RF no | |
781 CS no | |
782 MAP yes | |
783 DATE Wed Feb 29 22:49:36 2012 | |
784 NSEQ 2 | |
785 EFFN 2.000000 | |
786 CKSUM 1545265678 | |
787 STATS LOCAL MSV -7.4771 0.72838 | |
788 STATS LOCAL VITERBI -8.1550 0.72838 | |
789 STATS LOCAL FORWARD -3.6556 0.72838 | |
790 HMM A C G T | |
791 m->m m->i m->d i->m i->i d->m d->d | |
792 COMPO 1.43027 1.45972 1.24052 1.43038 | |
793 1.38629 1.38629 1.38629 1.38629 | |
794 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
795 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
796 1.38629 1.38629 1.38629 1.38629 | |
797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
798 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
799 1.38629 1.38629 1.38629 1.38629 | |
800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
801 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
802 1.38629 1.38629 1.38629 1.38629 | |
803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
804 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
805 1.38629 1.38629 1.38629 1.38629 | |
806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
807 5 2.81865 0.23582 2.88868 2.35662 5 - - | |
808 1.38629 1.38629 1.38629 1.38629 | |
809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
810 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
811 1.38629 1.38629 1.38629 1.38629 | |
812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
813 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
814 1.38629 1.38629 1.38629 1.38629 | |
815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
816 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
817 1.38629 1.38629 1.38629 1.38629 | |
818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
819 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
820 1.38629 1.38629 1.38629 1.38629 | |
821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
822 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
823 1.38629 1.38629 1.38629 1.38629 | |
824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
825 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
826 1.38629 1.38629 1.38629 1.38629 | |
827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
828 12 2.81865 0.23582 2.88868 2.35662 12 - - | |
829 1.38629 1.38629 1.38629 1.38629 | |
830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
831 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
832 1.38629 1.38629 1.38629 1.38629 | |
833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
834 14 2.53331 3.02441 0.20344 2.88069 14 - - | |
835 1.38629 1.38629 1.38629 1.38629 | |
836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
837 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
838 1.38629 1.38629 1.38629 1.38629 | |
839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
840 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
841 1.38629 1.38629 1.38629 1.38629 | |
842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
843 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
844 1.38629 1.38629 1.38629 1.38629 | |
845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
846 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
847 1.38629 1.38629 1.38629 1.38629 | |
848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
849 19 0.23862 2.84929 2.43386 2.70756 19 - - | |
850 1.38629 1.38629 1.38629 1.38629 | |
851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
852 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
853 1.38629 1.38629 1.38629 1.38629 | |
854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
855 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
856 1.38629 1.38629 1.38629 1.38629 | |
857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
858 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
859 1.38629 1.38629 1.38629 1.38629 | |
860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
861 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
862 1.38629 1.38629 1.38629 1.38629 | |
863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
864 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
865 1.38629 1.38629 1.38629 1.38629 | |
866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
867 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
868 1.38629 1.38629 1.38629 1.38629 | |
869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
870 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
871 1.38629 1.38629 1.38629 1.38629 | |
872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
873 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
874 1.38629 1.38629 1.38629 1.38629 | |
875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
876 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
877 1.38629 1.38629 1.38629 1.38629 | |
878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
879 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
880 1.38629 1.38629 1.38629 1.38629 | |
881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
882 30 2.81865 0.23582 2.88868 2.35662 30 - - | |
883 1.38629 1.38629 1.38629 1.38629 | |
884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
885 31 0.23862 2.84929 2.43386 2.70756 31 - - | |
886 1.38629 1.38629 1.38629 1.38629 | |
887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
888 32 0.23862 2.84929 2.43386 2.70756 32 - - | |
889 1.38629 1.38629 1.38629 1.38629 | |
890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
891 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
892 1.38629 1.38629 1.38629 1.38629 | |
893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
894 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
895 1.38629 1.38629 1.38629 1.38629 | |
896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
897 35 2.57915 2.25909 2.64442 0.28946 35 - - | |
898 1.38629 1.38629 1.38629 1.38629 | |
899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
900 36 0.92825 2.28391 0.95698 2.13014 36 - - | |
901 1.38629 1.38629 1.38629 1.38629 | |
902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
903 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
904 1.38629 1.38629 1.38629 1.38629 | |
905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
906 38 0.23862 2.84929 2.43386 2.70756 38 - - | |
907 1.38629 1.38629 1.38629 1.38629 | |
908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
909 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
910 1.38629 1.38629 1.38629 1.38629 | |
911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
912 40 2.81865 0.23582 2.88868 2.35662 40 - - | |
913 1.38629 1.38629 1.38629 1.38629 | |
914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
915 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
916 1.38629 1.38629 1.38629 1.38629 | |
917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
918 42 2.53331 3.02441 0.20344 2.88069 42 - - | |
919 1.38629 1.38629 1.38629 1.38629 | |
920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
921 43 2.57915 2.25909 2.64442 0.28946 43 - - | |
922 1.38629 1.38629 1.38629 1.38629 | |
923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
924 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
925 1.38629 1.38629 1.38629 1.38629 | |
926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
927 45 2.81865 0.23582 2.88868 2.35662 45 - - | |
928 1.38629 1.38629 1.38629 1.38629 | |
929 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
930 // | |
931 HMMER3/b [3.0 | March 2010] | |
932 NAME 3_End_Alveolata_58S_end_fifteena_long | |
933 LENG 45 | |
934 ALPH DNA | |
935 RF no | |
936 CS no | |
937 MAP yes | |
938 DATE Wed Feb 29 22:54:25 2012 | |
939 NSEQ 25 | |
940 EFFN 3.335571 | |
941 CKSUM 500672324 | |
942 STATS LOCAL MSV -7.9016 0.71932 | |
943 STATS LOCAL VITERBI -7.7396 0.71932 | |
944 STATS LOCAL FORWARD -4.0992 0.71932 | |
945 HMM A C G T | |
946 m->m m->i m->d i->m i->i d->m d->d | |
947 COMPO 1.72722 1.31020 1.32957 1.24527 | |
948 1.38629 1.38629 1.38629 1.38629 | |
949 0.03680 4.01378 4.01378 1.46634 0.26236 0.00000 * | |
950 1 3.09277 2.59779 3.14076 0.17801 1 - - | |
951 1.38629 1.38629 1.38629 1.38629 | |
952 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
953 2 2.95040 3.59193 0.11670 3.49704 2 - - | |
954 1.38629 1.38629 1.38629 1.38629 | |
955 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
956 3 2.95040 3.59193 0.11670 3.49704 3 - - | |
957 1.38629 1.38629 1.38629 1.38629 | |
958 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
959 4 3.43785 0.12964 3.48711 2.83245 4 - - | |
960 1.38629 1.38629 1.38629 1.38629 | |
961 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
962 5 2.95040 3.59193 0.11670 3.49704 5 - - | |
963 1.38629 1.38629 1.38629 1.38629 | |
964 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
965 6 3.43785 0.12964 3.48711 2.83245 6 - - | |
966 1.38629 1.38629 1.38629 1.38629 | |
967 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
968 7 3.09277 2.59779 3.14076 0.17801 7 - - | |
969 1.38629 1.38629 1.38629 1.38629 | |
970 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
971 8 2.54795 2.32143 0.27713 2.72309 8 - - | |
972 1.38629 1.38629 1.38629 1.38629 | |
973 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
974 9 3.09277 2.59779 3.14076 0.17801 9 - - | |
975 1.38629 1.38629 1.38629 1.38629 | |
976 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
977 10 3.09277 2.59779 3.14076 0.17801 10 - - | |
978 1.38629 1.38629 1.38629 1.38629 | |
979 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
980 11 2.95040 3.59193 0.11670 3.49704 11 - - | |
981 1.38629 1.38629 1.38629 1.38629 | |
982 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
983 12 2.95040 3.59193 0.11670 3.49704 12 - - | |
984 1.38629 1.38629 1.38629 1.38629 | |
985 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
986 13 2.95040 3.59193 0.11670 3.49704 13 - - | |
987 1.38629 1.38629 1.38629 1.38629 | |
988 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
989 14 0.14135 3.38438 2.80460 3.28643 14 - - | |
990 1.38629 1.38629 1.38629 1.38629 | |
991 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
992 15 3.43785 0.12964 3.48711 2.83245 15 - - | |
993 1.38629 1.38629 1.38629 1.38629 | |
994 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
995 16 3.09277 2.59779 3.14076 0.17801 16 - - | |
996 1.38629 1.38629 1.38629 1.38629 | |
997 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
998 17 0.14135 3.38438 2.80460 3.28643 17 - - | |
999 1.38629 1.38629 1.38629 1.38629 | |
1000 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1001 18 3.43785 0.12964 3.48711 2.83245 18 - - | |
1002 1.38629 1.38629 1.38629 1.38629 | |
1003 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1004 19 3.43785 0.12964 3.48711 2.83245 19 - - | |
1005 1.38629 1.38629 1.38629 1.38629 | |
1006 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1007 20 3.43785 0.12964 3.48711 2.83245 20 - - | |
1008 1.38629 1.38629 1.38629 1.38629 | |
1009 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1010 21 0.14135 3.38438 2.80460 3.28643 21 - - | |
1011 1.38629 1.38629 1.38629 1.38629 | |
1012 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1013 22 0.14135 3.38438 2.80460 3.28643 22 - - | |
1014 1.38629 1.38629 1.38629 1.38629 | |
1015 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1016 23 3.43785 0.12964 3.48711 2.83245 23 - - | |
1017 1.38629 1.38629 1.38629 1.38629 | |
1018 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1019 24 0.14135 3.38438 2.80460 3.28643 24 - - | |
1020 1.38629 1.38629 1.38629 1.38629 | |
1021 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1022 25 2.95040 3.59193 0.11670 3.49704 25 - - | |
1023 1.38629 1.38629 1.38629 1.38629 | |
1024 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1025 26 3.43785 0.12964 3.48711 2.83245 26 - - | |
1026 1.38629 1.38629 1.38629 1.38629 | |
1027 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1028 27 0.14135 3.38438 2.80460 3.28643 27 - - | |
1029 1.38629 1.38629 1.38629 1.38629 | |
1030 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1031 28 3.43785 0.12964 3.48711 2.83245 28 - - | |
1032 1.38629 1.38629 1.38629 1.38629 | |
1033 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1034 29 2.95040 3.59193 0.11670 3.49704 29 - - | |
1035 1.38629 1.38629 1.38629 1.38629 | |
1036 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1037 30 3.09277 2.59779 3.14076 0.17801 30 - - | |
1038 1.38629 1.38629 1.38629 1.38629 | |
1039 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1040 31 3.43785 0.12964 3.48711 2.83245 31 - - | |
1041 1.38629 1.38629 1.38629 1.38629 | |
1042 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1043 32 3.09277 2.59779 3.14076 0.17801 32 - - | |
1044 1.38629 1.38629 1.38629 1.38629 | |
1045 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1046 33 2.95040 3.59193 0.11670 3.49704 33 - - | |
1047 1.38629 1.38629 1.38629 1.38629 | |
1048 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1049 34 3.09277 2.59779 3.14076 0.17801 34 - - | |
1050 1.38629 1.38629 1.38629 1.38629 | |
1051 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1052 35 3.09277 2.59779 3.14076 0.17801 35 - - | |
1053 1.38629 1.38629 1.38629 1.38629 | |
1054 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1055 36 3.09277 2.59779 3.14076 0.17801 36 - - | |
1056 1.38629 1.38629 1.38629 1.38629 | |
1057 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1058 37 3.43785 0.12964 3.48711 2.83245 37 - - | |
1059 1.38629 1.38629 1.38629 1.38629 | |
1060 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1061 38 0.14135 3.38438 2.80460 3.28643 38 - - | |
1062 1.38629 1.38629 1.38629 1.38629 | |
1063 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1064 39 2.95040 3.59193 0.11670 3.49704 39 - - | |
1065 1.38629 1.38629 1.38629 1.38629 | |
1066 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1067 40 3.09277 2.59779 3.14076 0.17801 40 - - | |
1068 1.38629 1.38629 1.38629 1.38629 | |
1069 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1070 41 2.95040 3.59193 0.11670 3.49704 41 - - | |
1071 1.38629 1.38629 1.38629 1.38629 | |
1072 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1073 42 3.09277 2.59779 3.14076 0.17801 42 - - | |
1074 1.38629 1.38629 1.38629 1.38629 | |
1075 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1076 43 3.43785 0.12964 3.48711 2.83245 43 - - | |
1077 1.38629 1.38629 1.38629 1.38629 | |
1078 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1079 44 3.09277 2.59779 3.14076 0.17801 44 - - | |
1080 1.38629 1.38629 1.38629 1.38629 | |
1081 0.03680 4.01378 4.01378 1.46634 0.26236 1.09861 0.40547 | |
1082 45 3.09277 2.59779 3.14076 0.17801 45 - - | |
1083 1.38629 1.38629 1.38629 1.38629 | |
1084 0.01857 3.99555 * 1.46634 0.26236 0.00000 * | |
1085 // | |
1086 HMMER3/b [3.0 | March 2010] | |
1087 NAME 3_End_Alveolata_58S_end_fifteenb_long | |
1088 LENG 45 | |
1089 ALPH DNA | |
1090 RF no | |
1091 CS no | |
1092 MAP yes | |
1093 DATE Wed Feb 29 22:54:32 2012 | |
1094 NSEQ 16 | |
1095 EFFN 3.605469 | |
1096 CKSUM 2100785171 | |
1097 STATS LOCAL MSV -7.3453 0.71933 | |
1098 STATS LOCAL VITERBI -7.7419 0.71933 | |
1099 STATS LOCAL FORWARD -4.2360 0.71933 | |
1100 HMM A C G T | |
1101 m->m m->i m->d i->m i->i d->m d->d | |
1102 COMPO 1.83616 1.45443 1.24425 1.14294 | |
1103 1.38629 1.38629 1.38629 1.38629 | |
1104 0.03506 4.06139 4.06139 1.46634 0.26236 0.00000 * | |
1105 1 3.17670 2.65106 3.22145 0.16511 1 - - | |
1106 1.38629 1.38629 1.38629 1.38629 | |
1107 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1108 2 3.00689 3.67468 0.10808 3.58855 2 - - | |
1109 1.38629 1.38629 1.38629 1.38629 | |
1110 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1111 3 3.00689 3.67468 0.10808 3.58855 3 - - | |
1112 1.38629 1.38629 1.38629 1.38629 | |
1113 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1114 4 3.53238 0.11897 3.57752 2.90072 4 - - | |
1115 1.38629 1.38629 1.38629 1.38629 | |
1116 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1117 5 3.00689 3.67468 0.10808 3.58855 5 - - | |
1118 1.38629 1.38629 1.38629 1.38629 | |
1119 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1120 6 3.53238 0.11897 3.57752 2.90072 6 - - | |
1121 1.38629 1.38629 1.38629 1.38629 | |
1122 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1123 7 3.17670 2.65106 3.22145 0.16511 7 - - | |
1124 1.38629 1.38629 1.38629 1.38629 | |
1125 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1126 8 3.00689 3.67468 0.10808 3.58855 8 - - | |
1127 1.38629 1.38629 1.38629 1.38629 | |
1128 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1129 9 3.17670 2.65106 3.22145 0.16511 9 - - | |
1130 1.38629 1.38629 1.38629 1.38629 | |
1131 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1132 10 3.17670 2.65106 3.22145 0.16511 10 - - | |
1133 1.38629 1.38629 1.38629 1.38629 | |
1134 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1135 11 3.00689 3.67468 0.10808 3.58855 11 - - | |
1136 1.38629 1.38629 1.38629 1.38629 | |
1137 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1138 12 3.00689 3.67468 0.10808 3.58855 12 - - | |
1139 1.38629 1.38629 1.38629 1.38629 | |
1140 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1141 13 3.00689 3.67468 0.10808 3.58855 13 - - | |
1142 1.38629 1.38629 1.38629 1.38629 | |
1143 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1144 14 0.13100 3.46667 2.85777 3.37664 14 - - | |
1145 1.38629 1.38629 1.38629 1.38629 | |
1146 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1147 15 3.17670 2.65106 3.22145 0.16511 15 - - | |
1148 1.38629 1.38629 1.38629 1.38629 | |
1149 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1150 16 3.17670 2.65106 3.22145 0.16511 16 - - | |
1151 1.38629 1.38629 1.38629 1.38629 | |
1152 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1153 17 0.13100 3.46667 2.85777 3.37664 17 - - | |
1154 1.38629 1.38629 1.38629 1.38629 | |
1155 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1156 18 2.46082 0.82174 2.53269 0.92754 18 - - | |
1157 1.38629 1.38629 1.38629 1.38629 | |
1158 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1159 19 3.53238 0.11897 3.57752 2.90072 19 - - | |
1160 1.38629 1.38629 1.38629 1.38629 | |
1161 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1162 20 2.46082 0.82174 2.53269 0.92754 20 - - | |
1163 1.38629 1.38629 1.38629 1.38629 | |
1164 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1165 21 3.00689 3.67468 0.10808 3.58855 21 - - | |
1166 1.38629 1.38629 1.38629 1.38629 | |
1167 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1168 22 0.24265 3.10343 2.11836 2.98922 22 - - | |
1169 1.38629 1.38629 1.38629 1.38629 | |
1170 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1171 23 3.53238 0.11897 3.57752 2.90072 23 - - | |
1172 1.38629 1.38629 1.38629 1.38629 | |
1173 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1174 24 0.13100 3.46667 2.85777 3.37664 24 - - | |
1175 1.38629 1.38629 1.38629 1.38629 | |
1176 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1177 25 3.00689 3.67468 0.10808 3.58855 25 - - | |
1178 1.38629 1.38629 1.38629 1.38629 | |
1179 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1180 26 3.53238 0.11897 3.57752 2.90072 26 - - | |
1181 1.38629 1.38629 1.38629 1.38629 | |
1182 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1183 27 0.13100 3.46667 2.85777 3.37664 27 - - | |
1184 1.38629 1.38629 1.38629 1.38629 | |
1185 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1186 28 3.53238 0.11897 3.57752 2.90072 28 - - | |
1187 1.38629 1.38629 1.38629 1.38629 | |
1188 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1189 29 3.00689 3.67468 0.10808 3.58855 29 - - | |
1190 1.38629 1.38629 1.38629 1.38629 | |
1191 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1192 30 3.17670 2.65106 3.22145 0.16511 30 - - | |
1193 1.38629 1.38629 1.38629 1.38629 | |
1194 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1195 31 3.53238 0.11897 3.57752 2.90072 31 - - | |
1196 1.38629 1.38629 1.38629 1.38629 | |
1197 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1198 32 3.17670 2.65106 3.22145 0.16511 32 - - | |
1199 1.38629 1.38629 1.38629 1.38629 | |
1200 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1201 33 3.00689 3.67468 0.10808 3.58855 33 - - | |
1202 1.38629 1.38629 1.38629 1.38629 | |
1203 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1204 34 3.17670 2.65106 3.22145 0.16511 34 - - | |
1205 1.38629 1.38629 1.38629 1.38629 | |
1206 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1207 35 3.17670 2.65106 3.22145 0.16511 35 - - | |
1208 1.38629 1.38629 1.38629 1.38629 | |
1209 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1210 36 3.17670 2.65106 3.22145 0.16511 36 - - | |
1211 1.38629 1.38629 1.38629 1.38629 | |
1212 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1213 37 3.53238 0.11897 3.57752 2.90072 37 - - | |
1214 1.38629 1.38629 1.38629 1.38629 | |
1215 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1216 38 0.13100 3.46667 2.85777 3.37664 38 - - | |
1217 1.38629 1.38629 1.38629 1.38629 | |
1218 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1219 39 3.00689 3.67468 0.10808 3.58855 39 - - | |
1220 1.38629 1.38629 1.38629 1.38629 | |
1221 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1222 40 3.17670 2.65106 3.22145 0.16511 40 - - | |
1223 1.38629 1.38629 1.38629 1.38629 | |
1224 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1225 41 3.00689 3.67468 0.10808 3.58855 41 - - | |
1226 1.38629 1.38629 1.38629 1.38629 | |
1227 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1228 42 3.17670 2.65106 3.22145 0.16511 42 - - | |
1229 1.38629 1.38629 1.38629 1.38629 | |
1230 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1231 43 3.53238 0.11897 3.57752 2.90072 43 - - | |
1232 1.38629 1.38629 1.38629 1.38629 | |
1233 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1234 44 3.17670 2.65106 3.22145 0.16511 44 - - | |
1235 1.38629 1.38629 1.38629 1.38629 | |
1236 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 | |
1237 45 3.17670 2.65106 3.22145 0.16511 45 - - | |
1238 1.38629 1.38629 1.38629 1.38629 | |
1239 0.01768 4.04401 * 1.46634 0.26236 0.00000 * | |
1240 // | |
1241 HMMER3/b [3.0 | March 2010] | |
1242 NAME 3_End_Alveolata_58S_end_fifteenc_long | |
1243 LENG 45 | |
1244 ALPH DNA | |
1245 RF no | |
1246 CS no | |
1247 MAP yes | |
1248 DATE Wed Feb 29 22:54:38 2012 | |
1249 NSEQ 6 | |
1250 EFFN 3.237305 | |
1251 CKSUM 442242702 | |
1252 STATS LOCAL MSV -8.0313 0.71932 | |
1253 STATS LOCAL VITERBI -7.8597 0.71932 | |
1254 STATS LOCAL FORWARD -3.7770 0.71932 | |
1255 HMM A C G T | |
1256 m->m m->i m->d i->m i->i d->m d->d | |
1257 COMPO 2.05939 1.25473 1.20217 1.24906 | |
1258 1.38629 1.38629 1.38629 1.38629 | |
1259 0.03748 3.99587 3.99587 1.46634 0.26236 0.00000 * | |
1260 1 3.06071 2.57738 3.10992 0.18324 1 - - | |
1261 1.38629 1.38629 1.38629 1.38629 | |
1262 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1263 2 2.92809 3.55954 0.12029 3.46131 2 - - | |
1264 1.38629 1.38629 1.38629 1.38629 | |
1265 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1266 3 2.92809 3.55954 0.12029 3.46131 3 - - | |
1267 1.38629 1.38629 1.38629 1.38629 | |
1268 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1269 4 3.40113 0.13409 3.45193 2.80566 4 - - | |
1270 1.38629 1.38629 1.38629 1.38629 | |
1271 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1272 5 2.92809 3.55954 0.12029 3.46131 5 - - | |
1273 1.38629 1.38629 1.38629 1.38629 | |
1274 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1275 6 3.40113 0.13409 3.45193 2.80566 6 - - | |
1276 1.38629 1.38629 1.38629 1.38629 | |
1277 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1278 7 3.40113 0.13409 3.45193 2.80566 7 - - | |
1279 1.38629 1.38629 1.38629 1.38629 | |
1280 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1281 8 2.92809 3.55954 0.12029 3.46131 8 - - | |
1282 1.38629 1.38629 1.38629 1.38629 | |
1283 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1284 9 3.40113 0.13409 3.45193 2.80566 9 - - | |
1285 1.38629 1.38629 1.38629 1.38629 | |
1286 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1287 10 3.06071 2.57738 3.10992 0.18324 10 - - | |
1288 1.38629 1.38629 1.38629 1.38629 | |
1289 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1290 11 2.92809 3.55954 0.12029 3.46131 11 - - | |
1291 1.38629 1.38629 1.38629 1.38629 | |
1292 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1293 12 2.92809 3.55954 0.12029 3.46131 12 - - | |
1294 1.38629 1.38629 1.38629 1.38629 | |
1295 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1296 13 2.92809 3.55954 0.12029 3.46131 13 - - | |
1297 1.38629 1.38629 1.38629 1.38629 | |
1298 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1299 14 0.14561 3.35254 2.78388 3.25159 14 - - | |
1300 1.38629 1.38629 1.38629 1.38629 | |
1301 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1302 15 3.06071 2.57738 3.10992 0.18324 15 - - | |
1303 1.38629 1.38629 1.38629 1.38629 | |
1304 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1305 16 3.06071 2.57738 3.10992 0.18324 16 - - | |
1306 1.38629 1.38629 1.38629 1.38629 | |
1307 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1308 17 3.06071 2.57738 3.10992 0.18324 17 - - | |
1309 1.38629 1.38629 1.38629 1.38629 | |
1310 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1311 18 3.40113 0.13409 3.45193 2.80566 18 - - | |
1312 1.38629 1.38629 1.38629 1.38629 | |
1313 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1314 19 3.40113 0.13409 3.45193 2.80566 19 - - | |
1315 1.38629 1.38629 1.38629 1.38629 | |
1316 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1317 20 3.40113 0.13409 3.45193 2.80566 20 - - | |
1318 1.38629 1.38629 1.38629 1.38629 | |
1319 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1320 21 2.92809 3.55954 0.12029 3.46131 21 - - | |
1321 1.38629 1.38629 1.38629 1.38629 | |
1322 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1323 22 2.92809 3.55954 0.12029 3.46131 22 - - | |
1324 1.38629 1.38629 1.38629 1.38629 | |
1325 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1326 23 3.40113 0.13409 3.45193 2.80566 23 - - | |
1327 1.38629 1.38629 1.38629 1.38629 | |
1328 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1329 24 0.14561 3.35254 2.78388 3.25159 24 - - | |
1330 1.38629 1.38629 1.38629 1.38629 | |
1331 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1332 25 2.92809 3.55954 0.12029 3.46131 25 - - | |
1333 1.38629 1.38629 1.38629 1.38629 | |
1334 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1335 26 3.40113 0.13409 3.45193 2.80566 26 - - | |
1336 1.38629 1.38629 1.38629 1.38629 | |
1337 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1338 27 0.14561 3.35254 2.78388 3.25159 27 - - | |
1339 1.38629 1.38629 1.38629 1.38629 | |
1340 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1341 28 3.40113 0.13409 3.45193 2.80566 28 - - | |
1342 1.38629 1.38629 1.38629 1.38629 | |
1343 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1344 29 2.92809 3.55954 0.12029 3.46131 29 - - | |
1345 1.38629 1.38629 1.38629 1.38629 | |
1346 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1347 30 3.06071 2.57738 3.10992 0.18324 30 - - | |
1348 1.38629 1.38629 1.38629 1.38629 | |
1349 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1350 31 3.40113 0.13409 3.45193 2.80566 31 - - | |
1351 1.38629 1.38629 1.38629 1.38629 | |
1352 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1353 32 3.06071 2.57738 3.10992 0.18324 32 - - | |
1354 1.38629 1.38629 1.38629 1.38629 | |
1355 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1356 33 2.92809 3.55954 0.12029 3.46131 33 - - | |
1357 1.38629 1.38629 1.38629 1.38629 | |
1358 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1359 34 3.06071 2.57738 3.10992 0.18324 34 - - | |
1360 1.38629 1.38629 1.38629 1.38629 | |
1361 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1362 35 3.06071 2.57738 3.10992 0.18324 35 - - | |
1363 1.38629 1.38629 1.38629 1.38629 | |
1364 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1365 36 3.06071 2.57738 3.10992 0.18324 36 - - | |
1366 1.38629 1.38629 1.38629 1.38629 | |
1367 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1368 37 3.40113 0.13409 3.45193 2.80566 37 - - | |
1369 1.38629 1.38629 1.38629 1.38629 | |
1370 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1371 38 0.14561 3.35254 2.78388 3.25159 38 - - | |
1372 1.38629 1.38629 1.38629 1.38629 | |
1373 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1374 39 2.92809 3.55954 0.12029 3.46131 39 - - | |
1375 1.38629 1.38629 1.38629 1.38629 | |
1376 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1377 40 3.06071 2.57738 3.10992 0.18324 40 - - | |
1378 1.38629 1.38629 1.38629 1.38629 | |
1379 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1380 41 2.92809 3.55954 0.12029 3.46131 41 - - | |
1381 1.38629 1.38629 1.38629 1.38629 | |
1382 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1383 42 3.06071 2.57738 3.10992 0.18324 42 - - | |
1384 1.38629 1.38629 1.38629 1.38629 | |
1385 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1386 43 3.40113 0.13409 3.45193 2.80566 43 - - | |
1387 1.38629 1.38629 1.38629 1.38629 | |
1388 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1389 44 3.06071 2.57738 3.10992 0.18324 44 - - | |
1390 1.38629 1.38629 1.38629 1.38629 | |
1391 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 | |
1392 45 3.06071 2.57738 3.10992 0.18324 45 - - | |
1393 1.38629 1.38629 1.38629 1.38629 | |
1394 0.01891 3.97731 * 1.46634 0.26236 0.00000 * | |
1395 // | |
1396 HMMER3/b [3.0 | March 2010] | |
1397 NAME 3_End_Alveolata_58S_end_fifteend_long | |
1398 LENG 45 | |
1399 ALPH DNA | |
1400 RF no | |
1401 CS no | |
1402 MAP yes | |
1403 DATE Wed Feb 29 22:54:44 2012 | |
1404 NSEQ 7 | |
1405 EFFN 3.298340 | |
1406 CKSUM 2869266091 | |
1407 STATS LOCAL MSV -8.1459 0.71931 | |
1408 STATS LOCAL VITERBI -7.9055 0.71931 | |
1409 STATS LOCAL FORWARD -3.8325 0.71931 | |
1410 HMM A C G T | |
1411 m->m m->i m->d i->m i->i d->m d->d | |
1412 COMPO 2.06625 1.24709 1.32281 1.14065 | |
1413 1.38629 1.38629 1.38629 1.38629 | |
1414 0.03705 4.00703 4.00703 1.46634 0.26236 0.00000 * | |
1415 1 2.94206 3.57981 0.11803 3.48366 1 - - | |
1416 1.38629 1.38629 1.38629 1.38629 | |
1417 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1418 2 2.94206 3.57981 0.11803 3.48366 2 - - | |
1419 1.38629 1.38629 1.38629 1.38629 | |
1420 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1421 3 3.42409 0.13129 3.47393 2.82243 3 - - | |
1422 1.38629 1.38629 1.38629 1.38629 | |
1423 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1424 4 2.94206 3.57981 0.11803 3.48366 4 - - | |
1425 1.38629 1.38629 1.38629 1.38629 | |
1426 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1427 5 3.42409 0.13129 3.47393 2.82243 5 - - | |
1428 1.38629 1.38629 1.38629 1.38629 | |
1429 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1430 6 3.08072 2.59012 3.12917 0.17995 6 - - | |
1431 1.38629 1.38629 1.38629 1.38629 | |
1432 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1433 7 3.08072 2.59012 3.12917 0.17995 7 - - | |
1434 1.38629 1.38629 1.38629 1.38629 | |
1435 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1436 8 3.42409 0.13129 3.47393 2.82243 8 - - | |
1437 1.38629 1.38629 1.38629 1.38629 | |
1438 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1439 9 3.08072 2.59012 3.12917 0.17995 9 - - | |
1440 1.38629 1.38629 1.38629 1.38629 | |
1441 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1442 10 2.94206 3.57981 0.11803 3.48366 10 - - | |
1443 1.38629 1.38629 1.38629 1.38629 | |
1444 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1445 11 2.94206 3.57981 0.11803 3.48366 11 - - | |
1446 1.38629 1.38629 1.38629 1.38629 | |
1447 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1448 12 2.94206 3.57981 0.11803 3.48366 12 - - | |
1449 1.38629 1.38629 1.38629 1.38629 | |
1450 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1451 13 0.14293 3.37244 2.79684 3.27336 13 - - | |
1452 1.38629 1.38629 1.38629 1.38629 | |
1453 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1454 14 3.08072 2.59012 3.12917 0.17995 14 - - | |
1455 1.38629 1.38629 1.38629 1.38629 | |
1456 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1457 15 3.08072 2.59012 3.12917 0.17995 15 - - | |
1458 1.38629 1.38629 1.38629 1.38629 | |
1459 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1460 16 3.08072 2.59012 3.12917 0.17995 16 - - | |
1461 1.38629 1.38629 1.38629 1.38629 | |
1462 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1463 17 3.08072 2.59012 3.12917 0.17995 17 - - | |
1464 1.38629 1.38629 1.38629 1.38629 | |
1465 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1466 18 3.42409 0.13129 3.47393 2.82243 18 - - | |
1467 1.38629 1.38629 1.38629 1.38629 | |
1468 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1469 19 3.42409 0.13129 3.47393 2.82243 19 - - | |
1470 1.38629 1.38629 1.38629 1.38629 | |
1471 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1472 20 3.42409 0.13129 3.47393 2.82243 20 - - | |
1473 1.38629 1.38629 1.38629 1.38629 | |
1474 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1475 21 3.42409 0.13129 3.47393 2.82243 21 - - | |
1476 1.38629 1.38629 1.38629 1.38629 | |
1477 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1478 22 2.94206 3.57981 0.11803 3.48366 22 - - | |
1479 1.38629 1.38629 1.38629 1.38629 | |
1480 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1481 23 3.08072 2.59012 3.12917 0.17995 23 - - | |
1482 1.38629 1.38629 1.38629 1.38629 | |
1483 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1484 24 0.14293 3.37244 2.79684 3.27336 24 - - | |
1485 1.38629 1.38629 1.38629 1.38629 | |
1486 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1487 25 2.94206 3.57981 0.11803 3.48366 25 - - | |
1488 1.38629 1.38629 1.38629 1.38629 | |
1489 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1490 26 3.42409 0.13129 3.47393 2.82243 26 - - | |
1491 1.38629 1.38629 1.38629 1.38629 | |
1492 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1493 27 0.14293 3.37244 2.79684 3.27336 27 - - | |
1494 1.38629 1.38629 1.38629 1.38629 | |
1495 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1496 28 3.42409 0.13129 3.47393 2.82243 28 - - | |
1497 1.38629 1.38629 1.38629 1.38629 | |
1498 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1499 29 2.94206 3.57981 0.11803 3.48366 29 - - | |
1500 1.38629 1.38629 1.38629 1.38629 | |
1501 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1502 30 3.08072 2.59012 3.12917 0.17995 30 - - | |
1503 1.38629 1.38629 1.38629 1.38629 | |
1504 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1505 31 3.42409 0.13129 3.47393 2.82243 31 - - | |
1506 1.38629 1.38629 1.38629 1.38629 | |
1507 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1508 32 3.08072 2.59012 3.12917 0.17995 32 - - | |
1509 1.38629 1.38629 1.38629 1.38629 | |
1510 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1511 33 2.94206 3.57981 0.11803 3.48366 33 - - | |
1512 1.38629 1.38629 1.38629 1.38629 | |
1513 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1514 34 3.08072 2.59012 3.12917 0.17995 34 - - | |
1515 1.38629 1.38629 1.38629 1.38629 | |
1516 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1517 35 3.08072 2.59012 3.12917 0.17995 35 - - | |
1518 1.38629 1.38629 1.38629 1.38629 | |
1519 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1520 36 3.08072 2.59012 3.12917 0.17995 36 - - | |
1521 1.38629 1.38629 1.38629 1.38629 | |
1522 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1523 37 3.42409 0.13129 3.47393 2.82243 37 - - | |
1524 1.38629 1.38629 1.38629 1.38629 | |
1525 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1526 38 0.14293 3.37244 2.79684 3.27336 38 - - | |
1527 1.38629 1.38629 1.38629 1.38629 | |
1528 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1529 39 2.94206 3.57981 0.11803 3.48366 39 - - | |
1530 1.38629 1.38629 1.38629 1.38629 | |
1531 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1532 40 3.08072 2.59012 3.12917 0.17995 40 - - | |
1533 1.38629 1.38629 1.38629 1.38629 | |
1534 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1535 41 2.94206 3.57981 0.11803 3.48366 41 - - | |
1536 1.38629 1.38629 1.38629 1.38629 | |
1537 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1538 42 3.08072 2.59012 3.12917 0.17995 42 - - | |
1539 1.38629 1.38629 1.38629 1.38629 | |
1540 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1541 43 3.42409 0.13129 3.47393 2.82243 43 - - | |
1542 1.38629 1.38629 1.38629 1.38629 | |
1543 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1544 44 3.08072 2.59012 3.12917 0.17995 44 - - | |
1545 1.38629 1.38629 1.38629 1.38629 | |
1546 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 | |
1547 45 3.42409 0.13129 3.47393 2.82243 45 - - | |
1548 1.38629 1.38629 1.38629 1.38629 | |
1549 0.01870 3.98868 * 1.46634 0.26236 0.00000 * | |
1550 // | |
1551 HMMER3/b [3.0 | March 2010] | |
1552 NAME 3_End_Alveolata_58S_end_fifteene_long | |
1553 LENG 45 | |
1554 ALPH DNA | |
1555 RF no | |
1556 CS no | |
1557 MAP yes | |
1558 DATE Wed Feb 29 22:54:49 2012 | |
1559 NSEQ 14 | |
1560 EFFN 3.612793 | |
1561 CKSUM 3599068610 | |
1562 STATS LOCAL MSV -7.2495 0.71932 | |
1563 STATS LOCAL VITERBI -7.7818 0.71932 | |
1564 STATS LOCAL FORWARD -3.9403 0.71932 | |
1565 HMM A C G T | |
1566 m->m m->i m->d i->m i->i d->m d->d | |
1567 COMPO 2.01810 1.29360 1.24959 1.18356 | |
1568 1.38629 1.38629 1.38629 1.38629 | |
1569 0.03501 4.06265 4.06265 1.46634 0.26236 0.00000 * | |
1570 1 3.17890 2.65245 3.22356 0.16478 1 - - | |
1571 1.38629 1.38629 1.38629 1.38629 | |
1572 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1573 2 3.00833 3.67681 0.10787 3.59090 2 - - | |
1574 1.38629 1.38629 1.38629 1.38629 | |
1575 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1576 3 3.00833 3.67681 0.10787 3.59090 3 - - | |
1577 1.38629 1.38629 1.38629 1.38629 | |
1578 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1579 4 3.53482 0.11871 3.57985 2.90247 4 - - | |
1580 1.38629 1.38629 1.38629 1.38629 | |
1581 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1582 5 3.00833 3.67681 0.10787 3.59090 5 - - | |
1583 1.38629 1.38629 1.38629 1.38629 | |
1584 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1585 6 3.53482 0.11871 3.57985 2.90247 6 - - | |
1586 1.38629 1.38629 1.38629 1.38629 | |
1587 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1588 7 3.17890 2.65245 3.22356 0.16478 7 - - | |
1589 1.38629 1.38629 1.38629 1.38629 | |
1590 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1591 8 3.00833 3.67681 0.10787 3.59090 8 - - | |
1592 1.38629 1.38629 1.38629 1.38629 | |
1593 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1594 9 3.53482 0.11871 3.57985 2.90247 9 - - | |
1595 1.38629 1.38629 1.38629 1.38629 | |
1596 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1597 10 0.90681 1.49378 2.06689 1.40614 10 - - | |
1598 1.38629 1.38629 1.38629 1.38629 | |
1599 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1600 11 3.00833 3.67681 0.10787 3.59090 11 - - | |
1601 1.38629 1.38629 1.38629 1.38629 | |
1602 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1603 12 3.00833 3.67681 0.10787 3.59090 12 - - | |
1604 1.38629 1.38629 1.38629 1.38629 | |
1605 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1606 13 3.00833 3.67681 0.10787 3.59090 13 - - | |
1607 1.38629 1.38629 1.38629 1.38629 | |
1608 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1609 14 0.13074 3.46880 2.85915 3.37898 14 - - | |
1610 1.38629 1.38629 1.38629 1.38629 | |
1611 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1612 15 2.82437 1.87604 2.88303 0.31267 15 - - | |
1613 1.38629 1.38629 1.38629 1.38629 | |
1614 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1615 16 3.17890 2.65245 3.22356 0.16478 16 - - | |
1616 1.38629 1.38629 1.38629 1.38629 | |
1617 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1618 17 3.17890 2.65245 3.22356 0.16478 17 - - | |
1619 1.38629 1.38629 1.38629 1.38629 | |
1620 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1621 18 3.53482 0.11871 3.57985 2.90247 18 - - | |
1622 1.38629 1.38629 1.38629 1.38629 | |
1623 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1624 19 2.99789 0.26576 3.06012 1.99066 19 - - | |
1625 1.38629 1.38629 1.38629 1.38629 | |
1626 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1627 20 3.53482 0.11871 3.57985 2.90247 20 - - | |
1628 1.38629 1.38629 1.38629 1.38629 | |
1629 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1630 21 3.17890 2.65245 3.22356 0.16478 21 - - | |
1631 1.38629 1.38629 1.38629 1.38629 | |
1632 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1633 22 3.00833 3.67681 0.10787 3.59090 22 - - | |
1634 1.38629 1.38629 1.38629 1.38629 | |
1635 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1636 23 3.53482 0.11871 3.57985 2.90247 23 - - | |
1637 1.38629 1.38629 1.38629 1.38629 | |
1638 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1639 24 0.13074 3.46880 2.85915 3.37898 24 - - | |
1640 1.38629 1.38629 1.38629 1.38629 | |
1641 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1642 25 3.00833 3.67681 0.10787 3.59090 25 - - | |
1643 1.38629 1.38629 1.38629 1.38629 | |
1644 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1645 26 3.53482 0.11871 3.57985 2.90247 26 - - | |
1646 1.38629 1.38629 1.38629 1.38629 | |
1647 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1648 27 0.13074 3.46880 2.85915 3.37898 27 - - | |
1649 1.38629 1.38629 1.38629 1.38629 | |
1650 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1651 28 3.53482 0.11871 3.57985 2.90247 28 - - | |
1652 1.38629 1.38629 1.38629 1.38629 | |
1653 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1654 29 3.00833 3.67681 0.10787 3.59090 29 - - | |
1655 1.38629 1.38629 1.38629 1.38629 | |
1656 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1657 30 3.17890 2.65245 3.22356 0.16478 30 - - | |
1658 1.38629 1.38629 1.38629 1.38629 | |
1659 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1660 31 3.53482 0.11871 3.57985 2.90247 31 - - | |
1661 1.38629 1.38629 1.38629 1.38629 | |
1662 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1663 32 3.17890 2.65245 3.22356 0.16478 32 - - | |
1664 1.38629 1.38629 1.38629 1.38629 | |
1665 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1666 33 3.00833 3.67681 0.10787 3.59090 33 - - | |
1667 1.38629 1.38629 1.38629 1.38629 | |
1668 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1669 34 3.17890 2.65245 3.22356 0.16478 34 - - | |
1670 1.38629 1.38629 1.38629 1.38629 | |
1671 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1672 35 3.17890 2.65245 3.22356 0.16478 35 - - | |
1673 1.38629 1.38629 1.38629 1.38629 | |
1674 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1675 36 3.17890 2.65245 3.22356 0.16478 36 - - | |
1676 1.38629 1.38629 1.38629 1.38629 | |
1677 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1678 37 3.53482 0.11871 3.57985 2.90247 37 - - | |
1679 1.38629 1.38629 1.38629 1.38629 | |
1680 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1681 38 0.13074 3.46880 2.85915 3.37898 38 - - | |
1682 1.38629 1.38629 1.38629 1.38629 | |
1683 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1684 39 3.00833 3.67681 0.10787 3.59090 39 - - | |
1685 1.38629 1.38629 1.38629 1.38629 | |
1686 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1687 40 3.17890 2.65245 3.22356 0.16478 40 - - | |
1688 1.38629 1.38629 1.38629 1.38629 | |
1689 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1690 41 3.00833 3.67681 0.10787 3.59090 41 - - | |
1691 1.38629 1.38629 1.38629 1.38629 | |
1692 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1693 42 3.17890 2.65245 3.22356 0.16478 42 - - | |
1694 1.38629 1.38629 1.38629 1.38629 | |
1695 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1696 43 3.53482 0.11871 3.57985 2.90247 43 - - | |
1697 1.38629 1.38629 1.38629 1.38629 | |
1698 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1699 44 3.17890 2.65245 3.22356 0.16478 44 - - | |
1700 1.38629 1.38629 1.38629 1.38629 | |
1701 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
1702 45 2.82437 1.87604 2.88303 0.31267 45 - - | |
1703 1.38629 1.38629 1.38629 1.38629 | |
1704 0.01766 4.04529 * 1.46634 0.26236 0.00000 * | |
1705 // | |
1706 HMMER3/b [3.0 | March 2010] | |
1707 NAME 3_End_Alveolata_58S_end_fifteenf_long | |
1708 LENG 45 | |
1709 ALPH DNA | |
1710 RF no | |
1711 CS no | |
1712 MAP yes | |
1713 DATE Wed Feb 29 22:54:55 2012 | |
1714 NSEQ 3 | |
1715 EFFN 3.000000 | |
1716 CKSUM 4191745197 | |
1717 STATS LOCAL MSV -8.0134 0.72148 | |
1718 STATS LOCAL VITERBI -7.9970 0.72148 | |
1719 STATS LOCAL FORWARD -3.9305 0.72148 | |
1720 HMM A C G T | |
1721 m->m m->i m->d i->m i->i d->m d->d | |
1722 COMPO 1.88034 1.41850 1.31106 1.09109 | |
1723 1.38629 1.38629 1.38629 1.38629 | |
1724 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
1725 1 2.86982 3.47591 0.13017 3.36931 1 - - | |
1726 1.38629 1.38629 1.38629 1.38629 | |
1727 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1728 2 2.86982 3.47591 0.13017 3.36931 2 - - | |
1729 1.38629 1.38629 1.38629 1.38629 | |
1730 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1731 3 3.30705 0.14631 3.36166 2.73626 3 - - | |
1732 1.38629 1.38629 1.38629 1.38629 | |
1733 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1734 4 0.15719 3.27118 2.73043 3.16274 4 - - | |
1735 1.38629 1.38629 1.38629 1.38629 | |
1736 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1737 5 3.30705 0.14631 3.36166 2.73626 5 - - | |
1738 1.38629 1.38629 1.38629 1.38629 | |
1739 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1740 6 3.30705 0.14631 3.36166 2.73626 6 - - | |
1741 1.38629 1.38629 1.38629 1.38629 | |
1742 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1743 7 1.30792 2.11152 2.18422 0.70118 7 - - | |
1744 1.38629 1.38629 1.38629 1.38629 | |
1745 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1746 8 2.97980 2.52563 3.03204 0.19727 8 - - | |
1747 1.38629 1.38629 1.38629 1.38629 | |
1748 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1749 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
1750 1.38629 1.38629 1.38629 1.38629 | |
1751 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1752 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
1753 1.38629 1.38629 1.38629 1.38629 | |
1754 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1755 11 2.86982 3.47591 0.13017 3.36931 11 - - | |
1756 1.38629 1.38629 1.38629 1.38629 | |
1757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1758 12 2.86982 3.47591 0.13017 3.36931 12 - - | |
1759 1.38629 1.38629 1.38629 1.38629 | |
1760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1761 13 0.15719 3.27118 2.73043 3.16274 13 - - | |
1762 1.38629 1.38629 1.38629 1.38629 | |
1763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1764 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
1765 1.38629 1.38629 1.38629 1.38629 | |
1766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1767 15 0.15719 3.27118 2.73043 3.16274 15 - - | |
1768 1.38629 1.38629 1.38629 1.38629 | |
1769 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1770 16 2.42752 1.34012 2.49742 0.56628 16 - - | |
1771 1.38629 1.38629 1.38629 1.38629 | |
1772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1773 17 2.97980 2.52563 3.03204 0.19727 17 - - | |
1774 1.38629 1.38629 1.38629 1.38629 | |
1775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1776 18 3.30705 0.14631 3.36166 2.73626 18 - - | |
1777 1.38629 1.38629 1.38629 1.38629 | |
1778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1779 19 2.97980 2.52563 3.03204 0.19727 19 - - | |
1780 1.38629 1.38629 1.38629 1.38629 | |
1781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1782 20 3.30705 0.14631 3.36166 2.73626 20 - - | |
1783 1.38629 1.38629 1.38629 1.38629 | |
1784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1785 21 3.30705 0.14631 3.36166 2.73626 21 - - | |
1786 1.38629 1.38629 1.38629 1.38629 | |
1787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1788 22 2.97980 2.52563 3.03204 0.19727 22 - - | |
1789 1.38629 1.38629 1.38629 1.38629 | |
1790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1791 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
1792 1.38629 1.38629 1.38629 1.38629 | |
1793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1794 24 2.86982 3.47591 0.13017 3.36931 24 - - | |
1795 1.38629 1.38629 1.38629 1.38629 | |
1796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1797 25 2.86982 3.47591 0.13017 3.36931 25 - - | |
1798 1.38629 1.38629 1.38629 1.38629 | |
1799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1800 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
1801 1.38629 1.38629 1.38629 1.38629 | |
1802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1803 27 0.15719 3.27118 2.73043 3.16274 27 - - | |
1804 1.38629 1.38629 1.38629 1.38629 | |
1805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1806 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
1807 1.38629 1.38629 1.38629 1.38629 | |
1808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1809 29 2.86982 3.47591 0.13017 3.36931 29 - - | |
1810 1.38629 1.38629 1.38629 1.38629 | |
1811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1812 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
1813 1.38629 1.38629 1.38629 1.38629 | |
1814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1815 31 3.30705 0.14631 3.36166 2.73626 31 - - | |
1816 1.38629 1.38629 1.38629 1.38629 | |
1817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1818 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
1819 1.38629 1.38629 1.38629 1.38629 | |
1820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1821 33 2.86982 3.47591 0.13017 3.36931 33 - - | |
1822 1.38629 1.38629 1.38629 1.38629 | |
1823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1824 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
1825 1.38629 1.38629 1.38629 1.38629 | |
1826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1827 35 2.97980 2.52563 3.03204 0.19727 35 - - | |
1828 1.38629 1.38629 1.38629 1.38629 | |
1829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1830 36 2.97980 2.52563 3.03204 0.19727 36 - - | |
1831 1.38629 1.38629 1.38629 1.38629 | |
1832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1833 37 3.30705 0.14631 3.36166 2.73626 37 - - | |
1834 1.38629 1.38629 1.38629 1.38629 | |
1835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1836 38 0.15719 3.27118 2.73043 3.16274 38 - - | |
1837 1.38629 1.38629 1.38629 1.38629 | |
1838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1839 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
1840 1.38629 1.38629 1.38629 1.38629 | |
1841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1842 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
1843 1.38629 1.38629 1.38629 1.38629 | |
1844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1845 41 2.86982 3.47591 0.13017 3.36931 41 - - | |
1846 1.38629 1.38629 1.38629 1.38629 | |
1847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1848 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
1849 1.38629 1.38629 1.38629 1.38629 | |
1850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1851 43 3.30705 0.14631 3.36166 2.73626 43 - - | |
1852 1.38629 1.38629 1.38629 1.38629 | |
1853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1854 44 2.97980 2.52563 3.03204 0.19727 44 - - | |
1855 1.38629 1.38629 1.38629 1.38629 | |
1856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
1857 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
1858 1.38629 1.38629 1.38629 1.38629 | |
1859 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
1860 // | |
1861 HMMER3/b [3.0 | March 2010] | |
1862 NAME 3_End_Alveolata_58S_end_fivea_long | |
1863 LENG 45 | |
1864 ALPH DNA | |
1865 RF no | |
1866 CS no | |
1867 MAP yes | |
1868 DATE Wed Feb 29 22:47:57 2012 | |
1869 NSEQ 2 | |
1870 EFFN 2.000000 | |
1871 CKSUM 630474797 | |
1872 STATS LOCAL MSV -7.1031 0.72876 | |
1873 STATS LOCAL VITERBI -8.2897 0.72876 | |
1874 STATS LOCAL FORWARD -3.3234 0.72876 | |
1875 HMM A C G T | |
1876 m->m m->i m->d i->m i->i d->m d->d | |
1877 COMPO 1.65817 1.49734 1.37580 1.09916 | |
1878 1.38629 1.38629 1.38629 1.38629 | |
1879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
1880 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
1881 1.38629 1.38629 1.38629 1.38629 | |
1882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1883 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
1884 1.38629 1.38629 1.38629 1.38629 | |
1885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1886 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
1887 1.38629 1.38629 1.38629 1.38629 | |
1888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1889 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
1890 1.38629 1.38629 1.38629 1.38629 | |
1891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1892 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
1893 1.38629 1.38629 1.38629 1.38629 | |
1894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1895 6 2.81865 0.23582 2.88868 2.35662 6 - - | |
1896 1.38629 1.38629 1.38629 1.38629 | |
1897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1898 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
1899 1.38629 1.38629 1.38629 1.38629 | |
1900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1901 8 2.57915 2.25909 2.64442 0.28946 8 - - | |
1902 1.38629 1.38629 1.38629 1.38629 | |
1903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1904 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
1905 1.38629 1.38629 1.38629 1.38629 | |
1906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1907 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
1908 1.38629 1.38629 1.38629 1.38629 | |
1909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1910 11 2.53331 3.02441 0.20344 2.88069 11 - - | |
1911 1.38629 1.38629 1.38629 1.38629 | |
1912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1913 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
1914 1.38629 1.38629 1.38629 1.38629 | |
1915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1916 13 2.81865 0.23582 2.88868 2.35662 13 - - | |
1917 1.38629 1.38629 1.38629 1.38629 | |
1918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1919 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
1920 1.38629 1.38629 1.38629 1.38629 | |
1921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1922 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
1923 1.38629 1.38629 1.38629 1.38629 | |
1924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1925 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
1926 1.38629 1.38629 1.38629 1.38629 | |
1927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1928 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
1929 1.38629 1.38629 1.38629 1.38629 | |
1930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1931 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
1932 1.38629 1.38629 1.38629 1.38629 | |
1933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1934 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
1935 1.38629 1.38629 1.38629 1.38629 | |
1936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1937 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
1938 1.38629 1.38629 1.38629 1.38629 | |
1939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1940 21 2.53331 3.02441 0.20344 2.88069 21 - - | |
1941 1.38629 1.38629 1.38629 1.38629 | |
1942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1943 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
1944 1.38629 1.38629 1.38629 1.38629 | |
1945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1946 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
1947 1.38629 1.38629 1.38629 1.38629 | |
1948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1949 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
1950 1.38629 1.38629 1.38629 1.38629 | |
1951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1952 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
1953 1.38629 1.38629 1.38629 1.38629 | |
1954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1955 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
1956 1.38629 1.38629 1.38629 1.38629 | |
1957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1958 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
1959 1.38629 1.38629 1.38629 1.38629 | |
1960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1961 28 2.57915 2.25909 2.64442 0.28946 28 - - | |
1962 1.38629 1.38629 1.38629 1.38629 | |
1963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1964 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
1965 1.38629 1.38629 1.38629 1.38629 | |
1966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1967 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
1968 1.38629 1.38629 1.38629 1.38629 | |
1969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1970 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
1971 1.38629 1.38629 1.38629 1.38629 | |
1972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1973 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
1974 1.38629 1.38629 1.38629 1.38629 | |
1975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1976 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
1977 1.38629 1.38629 1.38629 1.38629 | |
1978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1979 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
1980 1.38629 1.38629 1.38629 1.38629 | |
1981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1982 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
1983 1.38629 1.38629 1.38629 1.38629 | |
1984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1985 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
1986 1.38629 1.38629 1.38629 1.38629 | |
1987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1988 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
1989 1.38629 1.38629 1.38629 1.38629 | |
1990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1991 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
1992 1.38629 1.38629 1.38629 1.38629 | |
1993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1994 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
1995 1.38629 1.38629 1.38629 1.38629 | |
1996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
1997 40 2.81865 0.23582 2.88868 2.35662 40 - - | |
1998 1.38629 1.38629 1.38629 1.38629 | |
1999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
2000 41 2.57915 2.25909 2.64442 0.28946 41 - - | |
2001 1.38629 1.38629 1.38629 1.38629 | |
2002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
2003 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
2004 1.38629 1.38629 1.38629 1.38629 | |
2005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
2006 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
2007 1.38629 1.38629 1.38629 1.38629 | |
2008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
2009 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
2010 1.38629 1.38629 1.38629 1.38629 | |
2011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
2012 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
2013 1.38629 1.38629 1.38629 1.38629 | |
2014 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
2015 // | |
2016 HMMER3/b [3.0 | March 2010] | |
2017 NAME 3_End_Alveolata_58S_end_fiveb_long | |
2018 LENG 45 | |
2019 ALPH DNA | |
2020 RF no | |
2021 CS no | |
2022 MAP yes | |
2023 DATE Wed Feb 29 22:48:04 2012 | |
2024 NSEQ 9 | |
2025 EFFN 3.361816 | |
2026 CKSUM 2438455031 | |
2027 STATS LOCAL MSV -8.0408 0.71932 | |
2028 STATS LOCAL VITERBI -7.6304 0.71932 | |
2029 STATS LOCAL FORWARD -4.1626 0.71932 | |
2030 HMM A C G T | |
2031 m->m m->i m->d i->m i->i d->m d->d | |
2032 COMPO 1.73808 1.37131 1.38409 1.14001 | |
2033 1.38629 1.38629 1.38629 1.38629 | |
2034 0.03662 4.01851 4.01851 1.46634 0.26236 0.00000 * | |
2035 1 3.44745 0.12851 3.49630 2.83942 1 - - | |
2036 1.38629 1.38629 1.38629 1.38629 | |
2037 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2038 2 0.24046 3.06994 2.16140 2.95373 2 - - | |
2039 1.38629 1.38629 1.38629 1.38629 | |
2040 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2041 3 3.44745 0.12851 3.49630 2.83942 3 - - | |
2042 1.38629 1.38629 1.38629 1.38629 | |
2043 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2044 4 3.10119 2.60314 3.14886 0.17666 4 - - | |
2045 1.38629 1.38629 1.38629 1.38629 | |
2046 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2047 5 3.44745 0.12851 3.49630 2.83942 5 - - | |
2048 1.38629 1.38629 1.38629 1.38629 | |
2049 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2050 6 3.10119 2.60314 3.14886 0.17666 6 - - | |
2051 1.38629 1.38629 1.38629 1.38629 | |
2052 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2053 7 3.10119 2.60314 3.14886 0.17666 7 - - | |
2054 1.38629 1.38629 1.38629 1.38629 | |
2055 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2056 8 2.95619 3.60037 0.11579 3.50635 8 - - | |
2057 1.38629 1.38629 1.38629 1.38629 | |
2058 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2059 9 2.95619 3.60037 0.11579 3.50635 9 - - | |
2060 1.38629 1.38629 1.38629 1.38629 | |
2061 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2062 10 2.95619 3.60037 0.11579 3.50635 10 - - | |
2063 1.38629 1.38629 1.38629 1.38629 | |
2064 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2065 11 0.14026 3.39271 2.81000 3.29556 11 - - | |
2066 1.38629 1.38629 1.38629 1.38629 | |
2067 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2068 12 3.44745 0.12851 3.49630 2.83942 12 - - | |
2069 1.38629 1.38629 1.38629 1.38629 | |
2070 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2071 13 0.14026 3.39271 2.81000 3.29556 13 - - | |
2072 1.38629 1.38629 1.38629 1.38629 | |
2073 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2074 14 3.44745 0.12851 3.49630 2.83942 14 - - | |
2075 1.38629 1.38629 1.38629 1.38629 | |
2076 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2077 15 2.95619 3.60037 0.11579 3.50635 15 - - | |
2078 1.38629 1.38629 1.38629 1.38629 | |
2079 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2080 16 3.44745 0.12851 3.49630 2.83942 16 - - | |
2081 1.38629 1.38629 1.38629 1.38629 | |
2082 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2083 17 3.44745 0.12851 3.49630 2.83942 17 - - | |
2084 1.38629 1.38629 1.38629 1.38629 | |
2085 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2086 18 3.10119 2.60314 3.14886 0.17666 18 - - | |
2087 1.38629 1.38629 1.38629 1.38629 | |
2088 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2089 19 2.95619 3.60037 0.11579 3.50635 19 - - | |
2090 1.38629 1.38629 1.38629 1.38629 | |
2091 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2092 20 0.14026 3.39271 2.81000 3.29556 20 - - | |
2093 1.38629 1.38629 1.38629 1.38629 | |
2094 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2095 21 2.95619 3.60037 0.11579 3.50635 21 - - | |
2096 1.38629 1.38629 1.38629 1.38629 | |
2097 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2098 22 0.14026 3.39271 2.81000 3.29556 22 - - | |
2099 1.38629 1.38629 1.38629 1.38629 | |
2100 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2101 23 2.95619 3.60037 0.11579 3.50635 23 - - | |
2102 1.38629 1.38629 1.38629 1.38629 | |
2103 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2104 24 3.10119 2.60314 3.14886 0.17666 24 - - | |
2105 1.38629 1.38629 1.38629 1.38629 | |
2106 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2107 25 0.14026 3.39271 2.81000 3.29556 25 - - | |
2108 1.38629 1.38629 1.38629 1.38629 | |
2109 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2110 26 3.10119 2.60314 3.14886 0.17666 26 - - | |
2111 1.38629 1.38629 1.38629 1.38629 | |
2112 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2113 27 2.95619 3.60037 0.11579 3.50635 27 - - | |
2114 1.38629 1.38629 1.38629 1.38629 | |
2115 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2116 28 3.10119 2.60314 3.14886 0.17666 28 - - | |
2117 1.38629 1.38629 1.38629 1.38629 | |
2118 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2119 29 3.44745 0.12851 3.49630 2.83942 29 - - | |
2120 1.38629 1.38629 1.38629 1.38629 | |
2121 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2122 30 3.10119 2.60314 3.14886 0.17666 30 - - | |
2123 1.38629 1.38629 1.38629 1.38629 | |
2124 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2125 31 2.95619 3.60037 0.11579 3.50635 31 - - | |
2126 1.38629 1.38629 1.38629 1.38629 | |
2127 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2128 32 3.44745 0.12851 3.49630 2.83942 32 - - | |
2129 1.38629 1.38629 1.38629 1.38629 | |
2130 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2131 33 3.10119 2.60314 3.14886 0.17666 33 - - | |
2132 1.38629 1.38629 1.38629 1.38629 | |
2133 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2134 34 3.10119 2.60314 3.14886 0.17666 34 - - | |
2135 1.38629 1.38629 1.38629 1.38629 | |
2136 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2137 35 3.44745 0.12851 3.49630 2.83942 35 - - | |
2138 1.38629 1.38629 1.38629 1.38629 | |
2139 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2140 36 0.14026 3.39271 2.81000 3.29556 36 - - | |
2141 1.38629 1.38629 1.38629 1.38629 | |
2142 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2143 37 2.95619 3.60037 0.11579 3.50635 37 - - | |
2144 1.38629 1.38629 1.38629 1.38629 | |
2145 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2146 38 3.10119 2.60314 3.14886 0.17666 38 - - | |
2147 1.38629 1.38629 1.38629 1.38629 | |
2148 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2149 39 2.95619 3.60037 0.11579 3.50635 39 - - | |
2150 1.38629 1.38629 1.38629 1.38629 | |
2151 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2152 40 3.44745 0.12851 3.49630 2.83942 40 - - | |
2153 1.38629 1.38629 1.38629 1.38629 | |
2154 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2155 41 3.10119 2.60314 3.14886 0.17666 41 - - | |
2156 1.38629 1.38629 1.38629 1.38629 | |
2157 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2158 42 3.10119 2.60314 3.14886 0.17666 42 - - | |
2159 1.38629 1.38629 1.38629 1.38629 | |
2160 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2161 43 3.10119 2.60314 3.14886 0.17666 43 - - | |
2162 1.38629 1.38629 1.38629 1.38629 | |
2163 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2164 44 3.10119 2.60314 3.14886 0.17666 44 - - | |
2165 1.38629 1.38629 1.38629 1.38629 | |
2166 0.03662 4.01851 4.01851 1.46634 0.26236 1.09861 0.40547 | |
2167 45 3.10119 2.60314 3.14886 0.17666 45 - - | |
2168 1.38629 1.38629 1.38629 1.38629 | |
2169 0.01848 4.00037 * 1.46634 0.26236 0.00000 * | |
2170 // | |
2171 HMMER3/b [3.0 | March 2010] | |
2172 NAME 3_End_Alveolata_58S_end_foura_long | |
2173 LENG 45 | |
2174 ALPH DNA | |
2175 RF no | |
2176 CS no | |
2177 MAP yes | |
2178 DATE Wed Feb 29 22:47:28 2012 | |
2179 NSEQ 8 | |
2180 EFFN 3.347656 | |
2181 CKSUM 1565564952 | |
2182 STATS LOCAL MSV -8.1688 0.71931 | |
2183 STATS LOCAL VITERBI -7.7321 0.71931 | |
2184 STATS LOCAL FORWARD -4.0847 0.71931 | |
2185 HMM A C G T | |
2186 m->m m->i m->d i->m i->i d->m d->d | |
2187 COMPO 1.72680 1.38541 1.31835 1.18958 | |
2188 1.38629 1.38629 1.38629 1.38629 | |
2189 0.03672 4.01596 4.01596 1.46634 0.26236 0.00000 * | |
2190 1 3.44228 0.12912 3.49135 2.83567 1 - - | |
2191 1.38629 1.38629 1.38629 1.38629 | |
2192 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2193 2 2.95307 3.59583 0.11628 3.50134 2 - - | |
2194 1.38629 1.38629 1.38629 1.38629 | |
2195 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2196 3 2.96273 0.26402 3.02577 2.02612 3 - - | |
2197 1.38629 1.38629 1.38629 1.38629 | |
2198 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2199 4 3.09665 2.60026 3.14450 0.17739 4 - - | |
2200 1.38629 1.38629 1.38629 1.38629 | |
2201 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2202 5 3.44228 0.12912 3.49135 2.83567 5 - - | |
2203 1.38629 1.38629 1.38629 1.38629 | |
2204 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2205 6 3.09665 2.60026 3.14450 0.17739 6 - - | |
2206 1.38629 1.38629 1.38629 1.38629 | |
2207 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2208 7 3.09665 2.60026 3.14450 0.17739 7 - - | |
2209 1.38629 1.38629 1.38629 1.38629 | |
2210 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2211 8 2.95307 3.59583 0.11628 3.50134 8 - - | |
2212 1.38629 1.38629 1.38629 1.38629 | |
2213 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2214 9 2.95307 3.59583 0.11628 3.50134 9 - - | |
2215 1.38629 1.38629 1.38629 1.38629 | |
2216 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2217 10 2.95307 3.59583 0.11628 3.50134 10 - - | |
2218 1.38629 1.38629 1.38629 1.38629 | |
2219 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2220 11 0.14085 3.38823 2.80709 3.29064 11 - - | |
2221 1.38629 1.38629 1.38629 1.38629 | |
2222 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2223 12 3.09665 2.60026 3.14450 0.17739 12 - - | |
2224 1.38629 1.38629 1.38629 1.38629 | |
2225 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2226 13 0.14085 3.38823 2.80709 3.29064 13 - - | |
2227 1.38629 1.38629 1.38629 1.38629 | |
2228 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2229 14 3.09665 2.60026 3.14450 0.17739 14 - - | |
2230 1.38629 1.38629 1.38629 1.38629 | |
2231 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2232 15 2.95307 3.59583 0.11628 3.50134 15 - - | |
2233 1.38629 1.38629 1.38629 1.38629 | |
2234 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2235 16 3.44228 0.12912 3.49135 2.83567 16 - - | |
2236 1.38629 1.38629 1.38629 1.38629 | |
2237 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2238 17 3.44228 0.12912 3.49135 2.83567 17 - - | |
2239 1.38629 1.38629 1.38629 1.38629 | |
2240 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2241 18 3.09665 2.60026 3.14450 0.17739 18 - - | |
2242 1.38629 1.38629 1.38629 1.38629 | |
2243 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2244 19 2.95307 3.59583 0.11628 3.50134 19 - - | |
2245 1.38629 1.38629 1.38629 1.38629 | |
2246 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2247 20 0.14085 3.38823 2.80709 3.29064 20 - - | |
2248 1.38629 1.38629 1.38629 1.38629 | |
2249 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2250 21 2.95307 3.59583 0.11628 3.50134 21 - - | |
2251 1.38629 1.38629 1.38629 1.38629 | |
2252 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2253 22 0.14085 3.38823 2.80709 3.29064 22 - - | |
2254 1.38629 1.38629 1.38629 1.38629 | |
2255 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2256 23 2.95307 3.59583 0.11628 3.50134 23 - - | |
2257 1.38629 1.38629 1.38629 1.38629 | |
2258 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2259 24 3.44228 0.12912 3.49135 2.83567 24 - - | |
2260 1.38629 1.38629 1.38629 1.38629 | |
2261 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2262 25 0.14085 3.38823 2.80709 3.29064 25 - - | |
2263 1.38629 1.38629 1.38629 1.38629 | |
2264 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2265 26 3.09665 2.60026 3.14450 0.17739 26 - - | |
2266 1.38629 1.38629 1.38629 1.38629 | |
2267 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2268 27 2.95307 3.59583 0.11628 3.50134 27 - - | |
2269 1.38629 1.38629 1.38629 1.38629 | |
2270 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2271 28 3.09665 2.60026 3.14450 0.17739 28 - - | |
2272 1.38629 1.38629 1.38629 1.38629 | |
2273 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2274 29 3.44228 0.12912 3.49135 2.83567 29 - - | |
2275 1.38629 1.38629 1.38629 1.38629 | |
2276 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2277 30 3.09665 2.60026 3.14450 0.17739 30 - - | |
2278 1.38629 1.38629 1.38629 1.38629 | |
2279 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2280 31 2.95307 3.59583 0.11628 3.50134 31 - - | |
2281 1.38629 1.38629 1.38629 1.38629 | |
2282 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2283 32 3.44228 0.12912 3.49135 2.83567 32 - - | |
2284 1.38629 1.38629 1.38629 1.38629 | |
2285 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2286 33 3.09665 2.60026 3.14450 0.17739 33 - - | |
2287 1.38629 1.38629 1.38629 1.38629 | |
2288 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2289 34 3.09665 2.60026 3.14450 0.17739 34 - - | |
2290 1.38629 1.38629 1.38629 1.38629 | |
2291 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2292 35 3.44228 0.12912 3.49135 2.83567 35 - - | |
2293 1.38629 1.38629 1.38629 1.38629 | |
2294 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2295 36 0.14085 3.38823 2.80709 3.29064 36 - - | |
2296 1.38629 1.38629 1.38629 1.38629 | |
2297 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2298 37 2.95307 3.59583 0.11628 3.50134 37 - - | |
2299 1.38629 1.38629 1.38629 1.38629 | |
2300 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2301 38 3.09665 2.60026 3.14450 0.17739 38 - - | |
2302 1.38629 1.38629 1.38629 1.38629 | |
2303 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2304 39 2.95307 3.59583 0.11628 3.50134 39 - - | |
2305 1.38629 1.38629 1.38629 1.38629 | |
2306 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2307 40 3.44228 0.12912 3.49135 2.83567 40 - - | |
2308 1.38629 1.38629 1.38629 1.38629 | |
2309 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2310 41 3.09665 2.60026 3.14450 0.17739 41 - - | |
2311 1.38629 1.38629 1.38629 1.38629 | |
2312 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2313 42 3.09665 2.60026 3.14450 0.17739 42 - - | |
2314 1.38629 1.38629 1.38629 1.38629 | |
2315 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2316 43 3.44228 0.12912 3.49135 2.83567 43 - - | |
2317 1.38629 1.38629 1.38629 1.38629 | |
2318 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2319 44 3.09665 2.60026 3.14450 0.17739 44 - - | |
2320 1.38629 1.38629 1.38629 1.38629 | |
2321 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 | |
2322 45 0.14085 3.38823 2.80709 3.29064 45 - - | |
2323 1.38629 1.38629 1.38629 1.38629 | |
2324 0.01853 3.99777 * 1.46634 0.26236 0.00000 * | |
2325 // | |
2326 HMMER3/b [3.0 | March 2010] | |
2327 NAME 3_End_Alveolata_58S_end_fourb_long | |
2328 LENG 45 | |
2329 ALPH DNA | |
2330 RF no | |
2331 CS no | |
2332 MAP yes | |
2333 DATE Wed Feb 29 22:47:35 2012 | |
2334 NSEQ 14 | |
2335 EFFN 3.325684 | |
2336 CKSUM 2052394201 | |
2337 STATS LOCAL MSV -8.1103 0.71933 | |
2338 STATS LOCAL VITERBI -7.7143 0.71933 | |
2339 STATS LOCAL FORWARD -3.9821 0.71933 | |
2340 HMM A C G T | |
2341 m->m m->i m->d i->m i->i d->m d->d | |
2342 COMPO 1.63564 1.44468 1.38366 1.14353 | |
2343 1.38629 1.38629 1.38629 1.38629 | |
2344 0.03687 4.01199 4.01199 1.46634 0.26236 0.00000 * | |
2345 1 2.94820 3.58873 0.11705 3.49350 1 - - | |
2346 1.38629 1.38629 1.38629 1.38629 | |
2347 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2348 2 3.43422 0.13008 3.48363 2.82980 2 - - | |
2349 1.38629 1.38629 1.38629 1.38629 | |
2350 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2351 3 0.14177 3.38122 2.80255 3.28298 3 - - | |
2352 1.38629 1.38629 1.38629 1.38629 | |
2353 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2354 4 3.43422 0.13008 3.48363 2.82980 4 - - | |
2355 1.38629 1.38629 1.38629 1.38629 | |
2356 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2357 5 3.08958 2.59576 3.13770 0.17852 5 - - | |
2358 1.38629 1.38629 1.38629 1.38629 | |
2359 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2360 6 3.43422 0.13008 3.48363 2.82980 6 - - | |
2361 1.38629 1.38629 1.38629 1.38629 | |
2362 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2363 7 3.08958 2.59576 3.13770 0.17852 7 - - | |
2364 1.38629 1.38629 1.38629 1.38629 | |
2365 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2366 8 3.08958 2.59576 3.13770 0.17852 8 - - | |
2367 1.38629 1.38629 1.38629 1.38629 | |
2368 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2369 9 2.94820 3.58873 0.11705 3.49350 9 - - | |
2370 1.38629 1.38629 1.38629 1.38629 | |
2371 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2372 10 2.94820 3.58873 0.11705 3.49350 10 - - | |
2373 1.38629 1.38629 1.38629 1.38629 | |
2374 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2375 11 2.94820 3.58873 0.11705 3.49350 11 - - | |
2376 1.38629 1.38629 1.38629 1.38629 | |
2377 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2378 12 0.14177 3.38122 2.80255 3.28298 12 - - | |
2379 1.38629 1.38629 1.38629 1.38629 | |
2380 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2381 13 3.08958 2.59576 3.13770 0.17852 13 - - | |
2382 1.38629 1.38629 1.38629 1.38629 | |
2383 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2384 14 3.08958 2.59576 3.13770 0.17852 14 - - | |
2385 1.38629 1.38629 1.38629 1.38629 | |
2386 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2387 15 3.08958 2.59576 3.13770 0.17852 15 - - | |
2388 1.38629 1.38629 1.38629 1.38629 | |
2389 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2390 16 3.43422 0.13008 3.48363 2.82980 16 - - | |
2391 1.38629 1.38629 1.38629 1.38629 | |
2392 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2393 17 3.43422 0.13008 3.48363 2.82980 17 - - | |
2394 1.38629 1.38629 1.38629 1.38629 | |
2395 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2396 18 3.08958 2.59576 3.13770 0.17852 18 - - | |
2397 1.38629 1.38629 1.38629 1.38629 | |
2398 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2399 19 2.94820 3.58873 0.11705 3.49350 19 - - | |
2400 1.38629 1.38629 1.38629 1.38629 | |
2401 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2402 20 0.14177 3.38122 2.80255 3.28298 20 - - | |
2403 1.38629 1.38629 1.38629 1.38629 | |
2404 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2405 21 2.94820 3.58873 0.11705 3.49350 21 - - | |
2406 1.38629 1.38629 1.38629 1.38629 | |
2407 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2408 22 0.14177 3.38122 2.80255 3.28298 22 - - | |
2409 1.38629 1.38629 1.38629 1.38629 | |
2410 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2411 23 2.94820 3.58873 0.11705 3.49350 23 - - | |
2412 1.38629 1.38629 1.38629 1.38629 | |
2413 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2414 24 3.08958 2.59576 3.13770 0.17852 24 - - | |
2415 1.38629 1.38629 1.38629 1.38629 | |
2416 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2417 25 0.14177 3.38122 2.80255 3.28298 25 - - | |
2418 1.38629 1.38629 1.38629 1.38629 | |
2419 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2420 26 3.08958 2.59576 3.13770 0.17852 26 - - | |
2421 1.38629 1.38629 1.38629 1.38629 | |
2422 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2423 27 2.94820 3.58873 0.11705 3.49350 27 - - | |
2424 1.38629 1.38629 1.38629 1.38629 | |
2425 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2426 28 3.08958 2.59576 3.13770 0.17852 28 - - | |
2427 1.38629 1.38629 1.38629 1.38629 | |
2428 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2429 29 3.43422 0.13008 3.48363 2.82980 29 - - | |
2430 1.38629 1.38629 1.38629 1.38629 | |
2431 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2432 30 3.08958 2.59576 3.13770 0.17852 30 - - | |
2433 1.38629 1.38629 1.38629 1.38629 | |
2434 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2435 31 2.94820 3.58873 0.11705 3.49350 31 - - | |
2436 1.38629 1.38629 1.38629 1.38629 | |
2437 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2438 32 3.43422 0.13008 3.48363 2.82980 32 - - | |
2439 1.38629 1.38629 1.38629 1.38629 | |
2440 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2441 33 3.08958 2.59576 3.13770 0.17852 33 - - | |
2442 1.38629 1.38629 1.38629 1.38629 | |
2443 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2444 34 3.08958 2.59576 3.13770 0.17852 34 - - | |
2445 1.38629 1.38629 1.38629 1.38629 | |
2446 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2447 35 3.43422 0.13008 3.48363 2.82980 35 - - | |
2448 1.38629 1.38629 1.38629 1.38629 | |
2449 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2450 36 0.14177 3.38122 2.80255 3.28298 36 - - | |
2451 1.38629 1.38629 1.38629 1.38629 | |
2452 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2453 37 2.94820 3.58873 0.11705 3.49350 37 - - | |
2454 1.38629 1.38629 1.38629 1.38629 | |
2455 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2456 38 3.08958 2.59576 3.13770 0.17852 38 - - | |
2457 1.38629 1.38629 1.38629 1.38629 | |
2458 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2459 39 2.94820 3.58873 0.11705 3.49350 39 - - | |
2460 1.38629 1.38629 1.38629 1.38629 | |
2461 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2462 40 3.43422 0.13008 3.48363 2.82980 40 - - | |
2463 1.38629 1.38629 1.38629 1.38629 | |
2464 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2465 41 3.08958 2.59576 3.13770 0.17852 41 - - | |
2466 1.38629 1.38629 1.38629 1.38629 | |
2467 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2468 42 3.08958 2.59576 3.13770 0.17852 42 - - | |
2469 1.38629 1.38629 1.38629 1.38629 | |
2470 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2471 43 0.14177 3.38122 2.80255 3.28298 43 - - | |
2472 1.38629 1.38629 1.38629 1.38629 | |
2473 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2474 44 0.14177 3.38122 2.80255 3.28298 44 - - | |
2475 1.38629 1.38629 1.38629 1.38629 | |
2476 0.03687 4.01199 4.01199 1.46634 0.26236 1.09861 0.40547 | |
2477 45 3.43422 0.13008 3.48363 2.82980 45 - - | |
2478 1.38629 1.38629 1.38629 1.38629 | |
2479 0.01860 3.99373 * 1.46634 0.26236 0.00000 * | |
2480 // | |
2481 HMMER3/b [3.0 | March 2010] | |
2482 NAME 3_End_Alveolata_58S_end_fourc_long | |
2483 LENG 45 | |
2484 ALPH DNA | |
2485 RF no | |
2486 CS no | |
2487 MAP yes | |
2488 DATE Wed Feb 29 22:47:41 2012 | |
2489 NSEQ 7 | |
2490 EFFN 3.612793 | |
2491 CKSUM 277781406 | |
2492 STATS LOCAL MSV -7.4130 0.71933 | |
2493 STATS LOCAL VITERBI -7.7029 0.71933 | |
2494 STATS LOCAL FORWARD -3.9206 0.71933 | |
2495 HMM A C G T | |
2496 m->m m->i m->d i->m i->i d->m d->d | |
2497 COMPO 1.78948 1.40356 1.28233 1.17168 | |
2498 1.38629 1.38629 1.38629 1.38629 | |
2499 0.03501 4.06265 4.06265 1.46634 0.26236 0.00000 * | |
2500 1 3.00833 3.67681 0.10787 3.59090 1 - - | |
2501 1.38629 1.38629 1.38629 1.38629 | |
2502 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2503 2 3.53482 0.11871 3.57985 2.90247 2 - - | |
2504 1.38629 1.38629 1.38629 1.38629 | |
2505 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2506 3 0.13074 3.46880 2.85915 3.37898 3 - - | |
2507 1.38629 1.38629 1.38629 1.38629 | |
2508 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2509 4 3.53482 0.11871 3.57985 2.90247 4 - - | |
2510 1.38629 1.38629 1.38629 1.38629 | |
2511 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2512 5 2.83792 1.90216 2.89608 0.30521 5 - - | |
2513 1.38629 1.38629 1.38629 1.38629 | |
2514 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2515 6 3.53482 0.11871 3.57985 2.90247 6 - - | |
2516 1.38629 1.38629 1.38629 1.38629 | |
2517 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2518 7 3.17890 2.65245 3.22356 0.16478 7 - - | |
2519 1.38629 1.38629 1.38629 1.38629 | |
2520 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2521 8 2.46560 0.79961 2.53748 0.95069 8 - - | |
2522 1.38629 1.38629 1.38629 1.38629 | |
2523 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2524 9 3.00833 3.67681 0.10787 3.59090 9 - - | |
2525 1.38629 1.38629 1.38629 1.38629 | |
2526 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2527 10 3.00833 3.67681 0.10787 3.59090 10 - - | |
2528 1.38629 1.38629 1.38629 1.38629 | |
2529 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2530 11 3.00833 3.67681 0.10787 3.59090 11 - - | |
2531 1.38629 1.38629 1.38629 1.38629 | |
2532 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2533 12 1.03144 2.58673 0.73117 2.44303 12 - - | |
2534 1.38629 1.38629 1.38629 1.38629 | |
2535 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2536 13 3.17890 2.65245 3.22356 0.16478 13 - - | |
2537 1.38629 1.38629 1.38629 1.38629 | |
2538 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2539 14 3.17890 2.65245 3.22356 0.16478 14 - - | |
2540 1.38629 1.38629 1.38629 1.38629 | |
2541 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2542 15 3.17890 2.65245 3.22356 0.16478 15 - - | |
2543 1.38629 1.38629 1.38629 1.38629 | |
2544 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2545 16 3.53482 0.11871 3.57985 2.90247 16 - - | |
2546 1.38629 1.38629 1.38629 1.38629 | |
2547 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2548 17 3.53482 0.11871 3.57985 2.90247 17 - - | |
2549 1.38629 1.38629 1.38629 1.38629 | |
2550 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2551 18 3.17890 2.65245 3.22356 0.16478 18 - - | |
2552 1.38629 1.38629 1.38629 1.38629 | |
2553 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2554 19 3.00833 3.67681 0.10787 3.59090 19 - - | |
2555 1.38629 1.38629 1.38629 1.38629 | |
2556 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2557 20 0.13074 3.46880 2.85915 3.37898 20 - - | |
2558 1.38629 1.38629 1.38629 1.38629 | |
2559 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2560 21 3.00833 3.67681 0.10787 3.59090 21 - - | |
2561 1.38629 1.38629 1.38629 1.38629 | |
2562 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2563 22 0.13074 3.46880 2.85915 3.37898 22 - - | |
2564 1.38629 1.38629 1.38629 1.38629 | |
2565 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2566 23 3.00833 3.67681 0.10787 3.59090 23 - - | |
2567 1.38629 1.38629 1.38629 1.38629 | |
2568 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2569 24 3.17890 2.65245 3.22356 0.16478 24 - - | |
2570 1.38629 1.38629 1.38629 1.38629 | |
2571 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2572 25 0.13074 3.46880 2.85915 3.37898 25 - - | |
2573 1.38629 1.38629 1.38629 1.38629 | |
2574 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2575 26 3.17890 2.65245 3.22356 0.16478 26 - - | |
2576 1.38629 1.38629 1.38629 1.38629 | |
2577 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2578 27 3.00833 3.67681 0.10787 3.59090 27 - - | |
2579 1.38629 1.38629 1.38629 1.38629 | |
2580 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2581 28 3.17890 2.65245 3.22356 0.16478 28 - - | |
2582 1.38629 1.38629 1.38629 1.38629 | |
2583 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2584 29 3.53482 0.11871 3.57985 2.90247 29 - - | |
2585 1.38629 1.38629 1.38629 1.38629 | |
2586 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2587 30 3.17890 2.65245 3.22356 0.16478 30 - - | |
2588 1.38629 1.38629 1.38629 1.38629 | |
2589 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2590 31 3.00833 3.67681 0.10787 3.59090 31 - - | |
2591 1.38629 1.38629 1.38629 1.38629 | |
2592 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2593 32 3.53482 0.11871 3.57985 2.90247 32 - - | |
2594 1.38629 1.38629 1.38629 1.38629 | |
2595 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2596 33 3.17890 2.65245 3.22356 0.16478 33 - - | |
2597 1.38629 1.38629 1.38629 1.38629 | |
2598 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2599 34 3.17890 2.65245 3.22356 0.16478 34 - - | |
2600 1.38629 1.38629 1.38629 1.38629 | |
2601 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2602 35 3.53482 0.11871 3.57985 2.90247 35 - - | |
2603 1.38629 1.38629 1.38629 1.38629 | |
2604 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2605 36 0.13074 3.46880 2.85915 3.37898 36 - - | |
2606 1.38629 1.38629 1.38629 1.38629 | |
2607 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2608 37 3.00833 3.67681 0.10787 3.59090 37 - - | |
2609 1.38629 1.38629 1.38629 1.38629 | |
2610 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2611 38 3.17890 2.65245 3.22356 0.16478 38 - - | |
2612 1.38629 1.38629 1.38629 1.38629 | |
2613 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2614 39 3.00833 3.67681 0.10787 3.59090 39 - - | |
2615 1.38629 1.38629 1.38629 1.38629 | |
2616 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2617 40 3.53482 0.11871 3.57985 2.90247 40 - - | |
2618 1.38629 1.38629 1.38629 1.38629 | |
2619 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2620 41 3.17890 2.65245 3.22356 0.16478 41 - - | |
2621 1.38629 1.38629 1.38629 1.38629 | |
2622 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2623 42 3.17890 2.65245 3.22356 0.16478 42 - - | |
2624 1.38629 1.38629 1.38629 1.38629 | |
2625 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2626 43 0.13074 3.46880 2.85915 3.37898 43 - - | |
2627 1.38629 1.38629 1.38629 1.38629 | |
2628 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2629 44 3.00833 3.67681 0.10787 3.59090 44 - - | |
2630 1.38629 1.38629 1.38629 1.38629 | |
2631 0.03501 4.06265 4.06265 1.46634 0.26236 1.09861 0.40547 | |
2632 45 3.53482 0.11871 3.57985 2.90247 45 - - | |
2633 1.38629 1.38629 1.38629 1.38629 | |
2634 0.01766 4.04529 * 1.46634 0.26236 0.00000 * | |
2635 // | |
2636 HMMER3/b [3.0 | March 2010] | |
2637 NAME 3_End_Alveolata_58S_end_fourd_long | |
2638 LENG 45 | |
2639 ALPH DNA | |
2640 RF no | |
2641 CS no | |
2642 MAP yes | |
2643 DATE Wed Feb 29 22:47:47 2012 | |
2644 NSEQ 3 | |
2645 EFFN 3.000000 | |
2646 CKSUM 945311865 | |
2647 STATS LOCAL MSV -8.1412 0.72023 | |
2648 STATS LOCAL VITERBI -7.6990 0.72023 | |
2649 STATS LOCAL FORWARD -3.8381 0.72023 | |
2650 HMM A C G T | |
2651 m->m m->i m->d i->m i->i d->m d->d | |
2652 COMPO 1.81287 1.32079 1.20046 1.31365 | |
2653 1.38629 1.38629 1.38629 1.38629 | |
2654 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
2655 1 2.86982 3.47591 0.13017 3.36931 1 - - | |
2656 1.38629 1.38629 1.38629 1.38629 | |
2657 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2658 2 3.30705 0.14631 3.36166 2.73626 2 - - | |
2659 1.38629 1.38629 1.38629 1.38629 | |
2660 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2661 3 2.86982 3.47591 0.13017 3.36931 3 - - | |
2662 1.38629 1.38629 1.38629 1.38629 | |
2663 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2664 4 3.30705 0.14631 3.36166 2.73626 4 - - | |
2665 1.38629 1.38629 1.38629 1.38629 | |
2666 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2667 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
2668 1.38629 1.38629 1.38629 1.38629 | |
2669 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2670 6 3.30705 0.14631 3.36166 2.73626 6 - - | |
2671 1.38629 1.38629 1.38629 1.38629 | |
2672 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2673 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
2674 1.38629 1.38629 1.38629 1.38629 | |
2675 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2676 8 3.30705 0.14631 3.36166 2.73626 8 - - | |
2677 1.38629 1.38629 1.38629 1.38629 | |
2678 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2679 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
2680 1.38629 1.38629 1.38629 1.38629 | |
2681 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2682 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
2683 1.38629 1.38629 1.38629 1.38629 | |
2684 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2685 11 2.86982 3.47591 0.13017 3.36931 11 - - | |
2686 1.38629 1.38629 1.38629 1.38629 | |
2687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2688 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
2689 1.38629 1.38629 1.38629 1.38629 | |
2690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2691 13 2.97980 2.52563 3.03204 0.19727 13 - - | |
2692 1.38629 1.38629 1.38629 1.38629 | |
2693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2694 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
2695 1.38629 1.38629 1.38629 1.38629 | |
2696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2697 15 2.97980 2.52563 3.03204 0.19727 15 - - | |
2698 1.38629 1.38629 1.38629 1.38629 | |
2699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2700 16 3.30705 0.14631 3.36166 2.73626 16 - - | |
2701 1.38629 1.38629 1.38629 1.38629 | |
2702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2703 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
2704 1.38629 1.38629 1.38629 1.38629 | |
2705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2706 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
2707 1.38629 1.38629 1.38629 1.38629 | |
2708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2709 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
2710 1.38629 1.38629 1.38629 1.38629 | |
2711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2712 20 0.15719 3.27118 2.73043 3.16274 20 - - | |
2713 1.38629 1.38629 1.38629 1.38629 | |
2714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2715 21 2.86982 3.47591 0.13017 3.36931 21 - - | |
2716 1.38629 1.38629 1.38629 1.38629 | |
2717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2718 22 0.15719 3.27118 2.73043 3.16274 22 - - | |
2719 1.38629 1.38629 1.38629 1.38629 | |
2720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2721 23 2.86982 3.47591 0.13017 3.36931 23 - - | |
2722 1.38629 1.38629 1.38629 1.38629 | |
2723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2724 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
2725 1.38629 1.38629 1.38629 1.38629 | |
2726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2727 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
2728 1.38629 1.38629 1.38629 1.38629 | |
2729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2730 26 2.86982 3.47591 0.13017 3.36931 26 - - | |
2731 1.38629 1.38629 1.38629 1.38629 | |
2732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2733 27 2.86982 3.47591 0.13017 3.36931 27 - - | |
2734 1.38629 1.38629 1.38629 1.38629 | |
2735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2736 28 2.97980 2.52563 3.03204 0.19727 28 - - | |
2737 1.38629 1.38629 1.38629 1.38629 | |
2738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2739 29 3.30705 0.14631 3.36166 2.73626 29 - - | |
2740 1.38629 1.38629 1.38629 1.38629 | |
2741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2742 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
2743 1.38629 1.38629 1.38629 1.38629 | |
2744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2745 31 2.86982 3.47591 0.13017 3.36931 31 - - | |
2746 1.38629 1.38629 1.38629 1.38629 | |
2747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2748 32 3.30705 0.14631 3.36166 2.73626 32 - - | |
2749 1.38629 1.38629 1.38629 1.38629 | |
2750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2751 33 2.97980 2.52563 3.03204 0.19727 33 - - | |
2752 1.38629 1.38629 1.38629 1.38629 | |
2753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2754 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
2755 1.38629 1.38629 1.38629 1.38629 | |
2756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2757 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
2758 1.38629 1.38629 1.38629 1.38629 | |
2759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2760 36 0.15719 3.27118 2.73043 3.16274 36 - - | |
2761 1.38629 1.38629 1.38629 1.38629 | |
2762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2763 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
2764 1.38629 1.38629 1.38629 1.38629 | |
2765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2766 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
2767 1.38629 1.38629 1.38629 1.38629 | |
2768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2769 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
2770 1.38629 1.38629 1.38629 1.38629 | |
2771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2772 40 3.30705 0.14631 3.36166 2.73626 40 - - | |
2773 1.38629 1.38629 1.38629 1.38629 | |
2774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2775 41 2.97980 2.52563 3.03204 0.19727 41 - - | |
2776 1.38629 1.38629 1.38629 1.38629 | |
2777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2778 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
2779 1.38629 1.38629 1.38629 1.38629 | |
2780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2781 43 0.15719 3.27118 2.73043 3.16274 43 - - | |
2782 1.38629 1.38629 1.38629 1.38629 | |
2783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2784 44 2.86982 3.47591 0.13017 3.36931 44 - - | |
2785 1.38629 1.38629 1.38629 1.38629 | |
2786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
2787 45 3.30705 0.14631 3.36166 2.73626 45 - - | |
2788 1.38629 1.38629 1.38629 1.38629 | |
2789 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
2790 // | |
2791 HMMER3/b [3.0 | March 2010] | |
2792 NAME 3_End_Alveolata_58S_end_fourteen_long | |
2793 LENG 45 | |
2794 ALPH DNA | |
2795 RF no | |
2796 CS no | |
2797 MAP yes | |
2798 DATE Wed Feb 29 22:54:14 2012 | |
2799 NSEQ 19 | |
2800 EFFN 3.975342 | |
2801 CKSUM 4093622679 | |
2802 STATS LOCAL MSV -7.2188 0.71932 | |
2803 STATS LOCAL VITERBI -7.4754 0.71932 | |
2804 STATS LOCAL FORWARD -4.0594 0.71932 | |
2805 HMM A C G T | |
2806 m->m m->i m->d i->m i->i d->m d->d | |
2807 COMPO 1.44172 1.86242 1.47496 0.96917 | |
2808 1.38629 1.38629 1.38629 1.38629 | |
2809 0.03292 4.12315 4.12315 1.46634 0.26236 0.00000 * | |
2810 1 0.11939 3.56822 2.92300 3.48820 1 - - | |
2811 1.38629 1.38629 1.38629 1.38629 | |
2812 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2813 2 0.11939 3.56822 2.92300 3.48820 2 - - | |
2814 1.38629 1.38629 1.38629 1.38629 | |
2815 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2816 3 3.07459 3.77484 0.09858 3.69966 3 - - | |
2817 1.38629 1.38629 1.38629 1.38629 | |
2818 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2819 4 3.07459 3.77484 0.09858 3.69966 4 - - | |
2820 1.38629 1.38629 1.38629 1.38629 | |
2821 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2822 5 3.28256 2.71819 3.32315 0.15032 5 - - | |
2823 1.38629 1.38629 1.38629 1.38629 | |
2824 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2825 6 0.11939 3.56822 2.92300 3.48820 6 - - | |
2826 1.38629 1.38629 1.38629 1.38629 | |
2827 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2828 7 3.64801 0.10726 3.68789 2.98308 7 - - | |
2829 1.38629 1.38629 1.38629 1.38629 | |
2830 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2831 8 3.28256 2.71819 3.32315 0.15032 8 - - | |
2832 1.38629 1.38629 1.38629 1.38629 | |
2833 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2834 9 3.28256 2.71819 3.32315 0.15032 9 - - | |
2835 1.38629 1.38629 1.38629 1.38629 | |
2836 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2837 10 3.64801 0.10726 3.68789 2.98308 10 - - | |
2838 1.38629 1.38629 1.38629 1.38629 | |
2839 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2840 11 3.28256 2.71819 3.32315 0.15032 11 - - | |
2841 1.38629 1.38629 1.38629 1.38629 | |
2842 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2843 12 0.11939 3.56822 2.92300 3.48820 12 - - | |
2844 1.38629 1.38629 1.38629 1.38629 | |
2845 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2846 13 0.11939 3.56822 2.92300 3.48820 13 - - | |
2847 1.38629 1.38629 1.38629 1.38629 | |
2848 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2849 14 0.11939 3.56822 2.92300 3.48820 14 - - | |
2850 1.38629 1.38629 1.38629 1.38629 | |
2851 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2852 15 3.28256 2.71819 3.32315 0.15032 15 - - | |
2853 1.38629 1.38629 1.38629 1.38629 | |
2854 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2855 16 3.28256 2.71819 3.32315 0.15032 16 - - | |
2856 1.38629 1.38629 1.38629 1.38629 | |
2857 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2858 17 1.36120 0.63933 2.33750 2.12501 17 - - | |
2859 1.38629 1.38629 1.38629 1.38629 | |
2860 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2861 18 3.28256 2.71819 3.32315 0.15032 18 - - | |
2862 1.38629 1.38629 1.38629 1.38629 | |
2863 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2864 19 3.07459 3.77484 0.09858 3.69966 19 - - | |
2865 1.38629 1.38629 1.38629 1.38629 | |
2866 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2867 20 3.07459 3.77484 0.09858 3.69966 20 - - | |
2868 1.38629 1.38629 1.38629 1.38629 | |
2869 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2870 21 3.07459 3.77484 0.09858 3.69966 21 - - | |
2871 1.38629 1.38629 1.38629 1.38629 | |
2872 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2873 22 0.11939 3.56822 2.92300 3.48820 22 - - | |
2874 1.38629 1.38629 1.38629 1.38629 | |
2875 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2876 23 3.07459 3.77484 0.09858 3.69966 23 - - | |
2877 1.38629 1.38629 1.38629 1.38629 | |
2878 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2879 24 3.28256 2.71819 3.32315 0.15032 24 - - | |
2880 1.38629 1.38629 1.38629 1.38629 | |
2881 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2882 25 0.11939 3.56822 2.92300 3.48820 25 - - | |
2883 1.38629 1.38629 1.38629 1.38629 | |
2884 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2885 26 3.28256 2.71819 3.32315 0.15032 26 - - | |
2886 1.38629 1.38629 1.38629 1.38629 | |
2887 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2888 27 3.07459 3.77484 0.09858 3.69966 27 - - | |
2889 1.38629 1.38629 1.38629 1.38629 | |
2890 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2891 28 3.28256 2.71819 3.32315 0.15032 28 - - | |
2892 1.38629 1.38629 1.38629 1.38629 | |
2893 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2894 29 3.28256 2.71819 3.32315 0.15032 29 - - | |
2895 1.38629 1.38629 1.38629 1.38629 | |
2896 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2897 30 3.28256 2.71819 3.32315 0.15032 30 - - | |
2898 1.38629 1.38629 1.38629 1.38629 | |
2899 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2900 31 0.11939 3.56822 2.92300 3.48820 31 - - | |
2901 1.38629 1.38629 1.38629 1.38629 | |
2902 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2903 32 2.20880 2.30847 0.72114 1.18890 32 - - | |
2904 1.38629 1.38629 1.38629 1.38629 | |
2905 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2906 33 3.28256 2.71819 3.32315 0.15032 33 - - | |
2907 1.38629 1.38629 1.38629 1.38629 | |
2908 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2909 34 3.28256 2.71819 3.32315 0.15032 34 - - | |
2910 1.38629 1.38629 1.38629 1.38629 | |
2911 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2912 35 3.64801 0.10726 3.68789 2.98308 35 - - | |
2913 1.38629 1.38629 1.38629 1.38629 | |
2914 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2915 36 0.11939 3.56822 2.92300 3.48820 36 - - | |
2916 1.38629 1.38629 1.38629 1.38629 | |
2917 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2918 37 3.07459 3.77484 0.09858 3.69966 37 - - | |
2919 1.38629 1.38629 1.38629 1.38629 | |
2920 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2921 38 3.28256 2.71819 3.32315 0.15032 38 - - | |
2922 1.38629 1.38629 1.38629 1.38629 | |
2923 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2924 39 3.07459 3.77484 0.09858 3.69966 39 - - | |
2925 1.38629 1.38629 1.38629 1.38629 | |
2926 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2927 40 3.64801 0.10726 3.68789 2.98308 40 - - | |
2928 1.38629 1.38629 1.38629 1.38629 | |
2929 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2930 41 3.28256 2.71819 3.32315 0.15032 41 - - | |
2931 1.38629 1.38629 1.38629 1.38629 | |
2932 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2933 42 3.28256 2.71819 3.32315 0.15032 42 - - | |
2934 1.38629 1.38629 1.38629 1.38629 | |
2935 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2936 43 2.57102 2.40862 1.92099 0.37522 43 - - | |
2937 1.38629 1.38629 1.38629 1.38629 | |
2938 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2939 44 3.28256 2.71819 3.32315 0.15032 44 - - | |
2940 1.38629 1.38629 1.38629 1.38629 | |
2941 0.03292 4.12315 4.12315 1.46634 0.26236 1.09861 0.40547 | |
2942 45 2.86994 0.35159 2.93552 1.67865 45 - - | |
2943 1.38629 1.38629 1.38629 1.38629 | |
2944 0.01660 4.10682 * 1.46634 0.26236 0.00000 * | |
2945 // | |
2946 HMMER3/b [3.0 | March 2010] | |
2947 NAME 3_End_Alveolata_58S_end_nine_long | |
2948 LENG 45 | |
2949 ALPH DNA | |
2950 RF no | |
2951 CS no | |
2952 MAP yes | |
2953 DATE Wed Feb 29 22:49:16 2012 | |
2954 NSEQ 4 | |
2955 EFFN 3.660156 | |
2956 CKSUM 2693919103 | |
2957 STATS LOCAL MSV -7.6646 0.71933 | |
2958 STATS LOCAL VITERBI -7.7506 0.71933 | |
2959 STATS LOCAL FORWARD -4.2563 0.71933 | |
2960 HMM A C G T | |
2961 m->m m->i m->d i->m i->i d->m d->d | |
2962 COMPO 1.41247 1.34559 1.34393 1.44710 | |
2963 1.38629 1.38629 1.38629 1.38629 | |
2964 0.03472 4.07076 4.07076 1.46634 0.26236 0.00000 * | |
2965 1 3.01755 3.69041 0.10652 3.60597 1 - - | |
2966 1.38629 1.38629 1.38629 1.38629 | |
2967 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2968 2 3.19300 2.66139 3.23711 0.16273 2 - - | |
2969 1.38629 1.38629 1.38629 1.38629 | |
2970 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2971 3 0.12911 3.48247 2.86794 3.39398 3 - - | |
2972 1.38629 1.38629 1.38629 1.38629 | |
2973 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2974 4 0.12911 3.48247 2.86794 3.39398 4 - - | |
2975 1.38629 1.38629 1.38629 1.38629 | |
2976 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2977 5 3.55045 0.11705 3.59478 2.91367 5 - - | |
2978 1.38629 1.38629 1.38629 1.38629 | |
2979 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2980 6 3.19300 2.66139 3.23711 0.16273 6 - - | |
2981 1.38629 1.38629 1.38629 1.38629 | |
2982 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2983 7 0.12911 3.48247 2.86794 3.39398 7 - - | |
2984 1.38629 1.38629 1.38629 1.38629 | |
2985 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2986 8 0.12911 3.48247 2.86794 3.39398 8 - - | |
2987 1.38629 1.38629 1.38629 1.38629 | |
2988 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2989 9 3.55045 0.11705 3.59478 2.91367 9 - - | |
2990 1.38629 1.38629 1.38629 1.38629 | |
2991 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2992 10 3.01755 3.69041 0.10652 3.60597 10 - - | |
2993 1.38629 1.38629 1.38629 1.38629 | |
2994 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2995 11 3.55045 0.11705 3.59478 2.91367 11 - - | |
2996 1.38629 1.38629 1.38629 1.38629 | |
2997 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
2998 12 2.46500 0.94717 2.53631 0.80297 12 - - | |
2999 1.38629 1.38629 1.38629 1.38629 | |
3000 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3001 13 3.01755 3.69041 0.10652 3.60597 13 - - | |
3002 1.38629 1.38629 1.38629 1.38629 | |
3003 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3004 14 3.01755 3.69041 0.10652 3.60597 14 - - | |
3005 1.38629 1.38629 1.38629 1.38629 | |
3006 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3007 15 3.55045 0.11705 3.59478 2.91367 15 - - | |
3008 1.38629 1.38629 1.38629 1.38629 | |
3009 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3010 16 0.12911 3.48247 2.86794 3.39398 16 - - | |
3011 1.38629 1.38629 1.38629 1.38629 | |
3012 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3013 17 3.55045 0.11705 3.59478 2.91367 17 - - | |
3014 1.38629 1.38629 1.38629 1.38629 | |
3015 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3016 18 0.12911 3.48247 2.86794 3.39398 18 - - | |
3017 1.38629 1.38629 1.38629 1.38629 | |
3018 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3019 19 0.12911 3.48247 2.86794 3.39398 19 - - | |
3020 1.38629 1.38629 1.38629 1.38629 | |
3021 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3022 20 3.55045 0.11705 3.59478 2.91367 20 - - | |
3023 1.38629 1.38629 1.38629 1.38629 | |
3024 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3025 21 3.55045 0.11705 3.59478 2.91367 21 - - | |
3026 1.38629 1.38629 1.38629 1.38629 | |
3027 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3028 22 0.84829 2.57052 0.89883 2.42686 22 - - | |
3029 1.38629 1.38629 1.38629 1.38629 | |
3030 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3031 23 3.01755 3.69041 0.10652 3.60597 23 - - | |
3032 1.38629 1.38629 1.38629 1.38629 | |
3033 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3034 24 3.55045 0.11705 3.59478 2.91367 24 - - | |
3035 1.38629 1.38629 1.38629 1.38629 | |
3036 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3037 25 0.12911 3.48247 2.86794 3.39398 25 - - | |
3038 1.38629 1.38629 1.38629 1.38629 | |
3039 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3040 26 3.19300 2.66139 3.23711 0.16273 26 - - | |
3041 1.38629 1.38629 1.38629 1.38629 | |
3042 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3043 27 3.01755 3.69041 0.10652 3.60597 27 - - | |
3044 1.38629 1.38629 1.38629 1.38629 | |
3045 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3046 28 3.19300 2.66139 3.23711 0.16273 28 - - | |
3047 1.38629 1.38629 1.38629 1.38629 | |
3048 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3049 29 3.19300 2.66139 3.23711 0.16273 29 - - | |
3050 1.38629 1.38629 1.38629 1.38629 | |
3051 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3052 30 3.19300 2.66139 3.23711 0.16273 30 - - | |
3053 1.38629 1.38629 1.38629 1.38629 | |
3054 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3055 31 3.01755 3.69041 0.10652 3.60597 31 - - | |
3056 1.38629 1.38629 1.38629 1.38629 | |
3057 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3058 32 3.01755 3.69041 0.10652 3.60597 32 - - | |
3059 1.38629 1.38629 1.38629 1.38629 | |
3060 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3061 33 3.19300 2.66139 3.23711 0.16273 33 - - | |
3062 1.38629 1.38629 1.38629 1.38629 | |
3063 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3064 34 3.19300 2.66139 3.23711 0.16273 34 - - | |
3065 1.38629 1.38629 1.38629 1.38629 | |
3066 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3067 35 3.55045 0.11705 3.59478 2.91367 35 - - | |
3068 1.38629 1.38629 1.38629 1.38629 | |
3069 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3070 36 0.12911 3.48247 2.86794 3.39398 36 - - | |
3071 1.38629 1.38629 1.38629 1.38629 | |
3072 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3073 37 3.01755 3.69041 0.10652 3.60597 37 - - | |
3074 1.38629 1.38629 1.38629 1.38629 | |
3075 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3076 38 3.19300 2.66139 3.23711 0.16273 38 - - | |
3077 1.38629 1.38629 1.38629 1.38629 | |
3078 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3079 39 3.01755 3.69041 0.10652 3.60597 39 - - | |
3080 1.38629 1.38629 1.38629 1.38629 | |
3081 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3082 40 3.19300 2.66139 3.23711 0.16273 40 - - | |
3083 1.38629 1.38629 1.38629 1.38629 | |
3084 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3085 41 3.01755 3.69041 0.10652 3.60597 41 - - | |
3086 1.38629 1.38629 1.38629 1.38629 | |
3087 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3088 42 3.55045 0.11705 3.59478 2.91367 42 - - | |
3089 1.38629 1.38629 1.38629 1.38629 | |
3090 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3091 43 1.00233 1.43748 2.06192 1.31588 43 - - | |
3092 1.38629 1.38629 1.38629 1.38629 | |
3093 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3094 44 3.55045 0.11705 3.59478 2.91367 44 - - | |
3095 1.38629 1.38629 1.38629 1.38629 | |
3096 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 | |
3097 45 0.12911 3.48247 2.86794 3.39398 45 - - | |
3098 1.38629 1.38629 1.38629 1.38629 | |
3099 0.01751 4.05355 * 1.46634 0.26236 0.00000 * | |
3100 // | |
3101 HMMER3/b [3.0 | March 2010] | |
3102 NAME 3_End_Alveolata_58S_end_nineteena_long | |
3103 LENG 45 | |
3104 ALPH DNA | |
3105 RF no | |
3106 CS no | |
3107 MAP yes | |
3108 DATE Wed Feb 29 22:55:44 2012 | |
3109 NSEQ 3 | |
3110 EFFN 3.000000 | |
3111 CKSUM 1579425985 | |
3112 STATS LOCAL MSV -8.0867 0.72116 | |
3113 STATS LOCAL VITERBI -7.9812 0.72116 | |
3114 STATS LOCAL FORWARD -3.7009 0.72116 | |
3115 HMM A C G T | |
3116 m->m m->i m->d i->m i->i d->m d->d | |
3117 COMPO 1.79232 1.40617 1.18456 1.26419 | |
3118 1.38629 1.38629 1.38629 1.38629 | |
3119 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
3120 1 3.30705 0.14631 3.36166 2.73626 1 - - | |
3121 1.38629 1.38629 1.38629 1.38629 | |
3122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3123 2 0.15719 3.27118 2.73043 3.16274 2 - - | |
3124 1.38629 1.38629 1.38629 1.38629 | |
3125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3126 3 0.15719 3.27118 2.73043 3.16274 3 - - | |
3127 1.38629 1.38629 1.38629 1.38629 | |
3128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3129 4 2.86982 3.47591 0.13017 3.36931 4 - - | |
3130 1.38629 1.38629 1.38629 1.38629 | |
3131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3132 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
3133 1.38629 1.38629 1.38629 1.38629 | |
3134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3135 6 2.86982 3.47591 0.13017 3.36931 6 - - | |
3136 1.38629 1.38629 1.38629 1.38629 | |
3137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3138 7 2.86982 3.47591 0.13017 3.36931 7 - - | |
3139 1.38629 1.38629 1.38629 1.38629 | |
3140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3141 8 3.30705 0.14631 3.36166 2.73626 8 - - | |
3142 1.38629 1.38629 1.38629 1.38629 | |
3143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3144 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
3145 1.38629 1.38629 1.38629 1.38629 | |
3146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3147 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
3148 1.38629 1.38629 1.38629 1.38629 | |
3149 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3150 11 3.30705 0.14631 3.36166 2.73626 11 - - | |
3151 1.38629 1.38629 1.38629 1.38629 | |
3152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3153 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
3154 1.38629 1.38629 1.38629 1.38629 | |
3155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3156 13 2.86982 3.47591 0.13017 3.36931 13 - - | |
3157 1.38629 1.38629 1.38629 1.38629 | |
3158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3159 14 3.30705 0.14631 3.36166 2.73626 14 - - | |
3160 1.38629 1.38629 1.38629 1.38629 | |
3161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3162 15 2.43440 0.61908 2.50724 1.22957 15 - - | |
3163 1.38629 1.38629 1.38629 1.38629 | |
3164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3165 16 2.97980 2.52563 3.03204 0.19727 16 - - | |
3166 1.38629 1.38629 1.38629 1.38629 | |
3167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3168 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
3169 1.38629 1.38629 1.38629 1.38629 | |
3170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3171 18 2.86982 3.47591 0.13017 3.36931 18 - - | |
3172 1.38629 1.38629 1.38629 1.38629 | |
3173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3174 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
3175 1.38629 1.38629 1.38629 1.38629 | |
3176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3177 20 3.30705 0.14631 3.36166 2.73626 20 - - | |
3178 1.38629 1.38629 1.38629 1.38629 | |
3179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3180 21 2.97980 2.52563 3.03204 0.19727 21 - - | |
3181 1.38629 1.38629 1.38629 1.38629 | |
3182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3183 22 2.86982 3.47591 0.13017 3.36931 22 - - | |
3184 1.38629 1.38629 1.38629 1.38629 | |
3185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3186 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
3187 1.38629 1.38629 1.38629 1.38629 | |
3188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3189 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
3190 1.38629 1.38629 1.38629 1.38629 | |
3191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3192 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
3193 1.38629 1.38629 1.38629 1.38629 | |
3194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3195 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
3196 1.38629 1.38629 1.38629 1.38629 | |
3197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3198 27 2.86982 3.47591 0.13017 3.36931 27 - - | |
3199 1.38629 1.38629 1.38629 1.38629 | |
3200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3201 28 2.12334 2.11792 1.37287 0.67982 28 - - | |
3202 1.38629 1.38629 1.38629 1.38629 | |
3203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3204 29 2.97980 2.52563 3.03204 0.19727 29 - - | |
3205 1.38629 1.38629 1.38629 1.38629 | |
3206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3207 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
3208 1.38629 1.38629 1.38629 1.38629 | |
3209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3210 31 2.86982 3.47591 0.13017 3.36931 31 - - | |
3211 1.38629 1.38629 1.38629 1.38629 | |
3212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3213 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
3214 1.38629 1.38629 1.38629 1.38629 | |
3215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3216 33 2.97980 2.52563 3.03204 0.19727 33 - - | |
3217 1.38629 1.38629 1.38629 1.38629 | |
3218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3219 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
3220 1.38629 1.38629 1.38629 1.38629 | |
3221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3222 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
3223 1.38629 1.38629 1.38629 1.38629 | |
3224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3225 36 0.15719 3.27118 2.73043 3.16274 36 - - | |
3226 1.38629 1.38629 1.38629 1.38629 | |
3227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3228 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
3229 1.38629 1.38629 1.38629 1.38629 | |
3230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3231 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
3232 1.38629 1.38629 1.38629 1.38629 | |
3233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3234 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
3235 1.38629 1.38629 1.38629 1.38629 | |
3236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3237 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
3238 1.38629 1.38629 1.38629 1.38629 | |
3239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3240 41 0.15719 3.27118 2.73043 3.16274 41 - - | |
3241 1.38629 1.38629 1.38629 1.38629 | |
3242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3243 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
3244 1.38629 1.38629 1.38629 1.38629 | |
3245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3246 43 3.30705 0.14631 3.36166 2.73626 43 - - | |
3247 1.38629 1.38629 1.38629 1.38629 | |
3248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3249 44 3.30705 0.14631 3.36166 2.73626 44 - - | |
3250 1.38629 1.38629 1.38629 1.38629 | |
3251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3252 45 2.86982 3.47591 0.13017 3.36931 45 - - | |
3253 1.38629 1.38629 1.38629 1.38629 | |
3254 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
3255 // | |
3256 HMMER3/b [3.0 | March 2010] | |
3257 NAME 3_End_Alveolata_58S_end_nineteenb_long | |
3258 LENG 45 | |
3259 ALPH DNA | |
3260 RF no | |
3261 CS no | |
3262 MAP yes | |
3263 DATE Wed Feb 29 22:55:50 2012 | |
3264 NSEQ 3 | |
3265 EFFN 3.000000 | |
3266 CKSUM 2871410458 | |
3267 STATS LOCAL MSV -8.0750 0.72053 | |
3268 STATS LOCAL VITERBI -7.9443 0.72053 | |
3269 STATS LOCAL FORWARD -3.7952 0.72053 | |
3270 HMM A C G T | |
3271 m->m m->i m->d i->m i->i d->m d->d | |
3272 COMPO 1.54304 1.52189 1.31521 1.20546 | |
3273 1.38629 1.38629 1.38629 1.38629 | |
3274 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
3275 1 3.30705 0.14631 3.36166 2.73626 1 - - | |
3276 1.38629 1.38629 1.38629 1.38629 | |
3277 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3278 2 0.15719 3.27118 2.73043 3.16274 2 - - | |
3279 1.38629 1.38629 1.38629 1.38629 | |
3280 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3281 3 0.15719 3.27118 2.73043 3.16274 3 - - | |
3282 1.38629 1.38629 1.38629 1.38629 | |
3283 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3284 4 2.86982 3.47591 0.13017 3.36931 4 - - | |
3285 1.38629 1.38629 1.38629 1.38629 | |
3286 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3287 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
3288 1.38629 1.38629 1.38629 1.38629 | |
3289 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3290 6 2.86982 3.47591 0.13017 3.36931 6 - - | |
3291 1.38629 1.38629 1.38629 1.38629 | |
3292 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3293 7 2.86982 3.47591 0.13017 3.36931 7 - - | |
3294 1.38629 1.38629 1.38629 1.38629 | |
3295 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3296 8 3.30705 0.14631 3.36166 2.73626 8 - - | |
3297 1.38629 1.38629 1.38629 1.38629 | |
3298 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3299 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
3300 1.38629 1.38629 1.38629 1.38629 | |
3301 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3302 10 0.15719 3.27118 2.73043 3.16274 10 - - | |
3303 1.38629 1.38629 1.38629 1.38629 | |
3304 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3305 11 2.97980 2.52563 3.03204 0.19727 11 - - | |
3306 1.38629 1.38629 1.38629 1.38629 | |
3307 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3308 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
3309 1.38629 1.38629 1.38629 1.38629 | |
3310 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3311 13 2.86982 3.47591 0.13017 3.36931 13 - - | |
3312 1.38629 1.38629 1.38629 1.38629 | |
3313 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3314 14 3.30705 0.14631 3.36166 2.73626 14 - - | |
3315 1.38629 1.38629 1.38629 1.38629 | |
3316 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3317 15 2.97980 2.52563 3.03204 0.19727 15 - - | |
3318 1.38629 1.38629 1.38629 1.38629 | |
3319 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3320 16 0.15719 3.27118 2.73043 3.16274 16 - - | |
3321 1.38629 1.38629 1.38629 1.38629 | |
3322 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3323 17 2.97980 2.52563 3.03204 0.19727 17 - - | |
3324 1.38629 1.38629 1.38629 1.38629 | |
3325 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3326 18 2.86982 3.47591 0.13017 3.36931 18 - - | |
3327 1.38629 1.38629 1.38629 1.38629 | |
3328 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3329 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
3330 1.38629 1.38629 1.38629 1.38629 | |
3331 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3332 20 3.30705 0.14631 3.36166 2.73626 20 - - | |
3333 1.38629 1.38629 1.38629 1.38629 | |
3334 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3335 21 2.97980 2.52563 3.03204 0.19727 21 - - | |
3336 1.38629 1.38629 1.38629 1.38629 | |
3337 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3338 22 0.15719 3.27118 2.73043 3.16274 22 - - | |
3339 1.38629 1.38629 1.38629 1.38629 | |
3340 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3341 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
3342 1.38629 1.38629 1.38629 1.38629 | |
3343 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3344 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
3345 1.38629 1.38629 1.38629 1.38629 | |
3346 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3347 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
3348 1.38629 1.38629 1.38629 1.38629 | |
3349 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3350 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
3351 1.38629 1.38629 1.38629 1.38629 | |
3352 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3353 27 2.86982 3.47591 0.13017 3.36931 27 - - | |
3354 1.38629 1.38629 1.38629 1.38629 | |
3355 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3356 28 2.97980 2.52563 3.03204 0.19727 28 - - | |
3357 1.38629 1.38629 1.38629 1.38629 | |
3358 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3359 29 2.97980 2.52563 3.03204 0.19727 29 - - | |
3360 1.38629 1.38629 1.38629 1.38629 | |
3361 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3362 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
3363 1.38629 1.38629 1.38629 1.38629 | |
3364 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3365 31 2.86982 3.47591 0.13017 3.36931 31 - - | |
3366 1.38629 1.38629 1.38629 1.38629 | |
3367 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3368 32 3.30705 0.14631 3.36166 2.73626 32 - - | |
3369 1.38629 1.38629 1.38629 1.38629 | |
3370 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3371 33 2.97980 2.52563 3.03204 0.19727 33 - - | |
3372 1.38629 1.38629 1.38629 1.38629 | |
3373 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3374 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
3375 1.38629 1.38629 1.38629 1.38629 | |
3376 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3377 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
3378 1.38629 1.38629 1.38629 1.38629 | |
3379 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3380 36 0.15719 3.27118 2.73043 3.16274 36 - - | |
3381 1.38629 1.38629 1.38629 1.38629 | |
3382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3383 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
3384 1.38629 1.38629 1.38629 1.38629 | |
3385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3386 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
3387 1.38629 1.38629 1.38629 1.38629 | |
3388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3389 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
3390 1.38629 1.38629 1.38629 1.38629 | |
3391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3392 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
3393 1.38629 1.38629 1.38629 1.38629 | |
3394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3395 41 0.15719 3.27118 2.73043 3.16274 41 - - | |
3396 1.38629 1.38629 1.38629 1.38629 | |
3397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3398 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
3399 1.38629 1.38629 1.38629 1.38629 | |
3400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3401 43 3.30705 0.14631 3.36166 2.73626 43 - - | |
3402 1.38629 1.38629 1.38629 1.38629 | |
3403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3404 44 3.30705 0.14631 3.36166 2.73626 44 - - | |
3405 1.38629 1.38629 1.38629 1.38629 | |
3406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
3407 45 2.86982 3.47591 0.13017 3.36931 45 - - | |
3408 1.38629 1.38629 1.38629 1.38629 | |
3409 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
3410 // | |
3411 HMMER3/b [3.0 | March 2010] | |
3412 NAME 3_End_Alveolata_58S_end_onea_long | |
3413 LENG 45 | |
3414 ALPH DNA | |
3415 RF no | |
3416 CS no | |
3417 MAP yes | |
3418 DATE Wed Feb 29 22:42:30 2012 | |
3419 NSEQ 2 | |
3420 EFFN 2.000000 | |
3421 CKSUM 634275971 | |
3422 STATS LOCAL MSV -7.4720 0.73173 | |
3423 STATS LOCAL VITERBI -8.2528 0.73173 | |
3424 STATS LOCAL FORWARD -3.4391 0.73173 | |
3425 HMM A C G T | |
3426 m->m m->i m->d i->m i->i d->m d->d | |
3427 COMPO 1.40721 1.72349 1.41702 1.09573 | |
3428 1.38629 1.38629 1.38629 1.38629 | |
3429 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
3430 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
3431 1.38629 1.38629 1.38629 1.38629 | |
3432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3433 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
3434 1.38629 1.38629 1.38629 1.38629 | |
3435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3436 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
3437 1.38629 1.38629 1.38629 1.38629 | |
3438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3439 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
3440 1.38629 1.38629 1.38629 1.38629 | |
3441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3442 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
3443 1.38629 1.38629 1.38629 1.38629 | |
3444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3445 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
3446 1.38629 1.38629 1.38629 1.38629 | |
3447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3448 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
3449 1.38629 1.38629 1.38629 1.38629 | |
3450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3451 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
3452 1.38629 1.38629 1.38629 1.38629 | |
3453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3454 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
3455 1.38629 1.38629 1.38629 1.38629 | |
3456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3457 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
3458 1.38629 1.38629 1.38629 1.38629 | |
3459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3460 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
3461 1.38629 1.38629 1.38629 1.38629 | |
3462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3463 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
3464 1.38629 1.38629 1.38629 1.38629 | |
3465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3466 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
3467 1.38629 1.38629 1.38629 1.38629 | |
3468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3469 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
3470 1.38629 1.38629 1.38629 1.38629 | |
3471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3472 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
3473 1.38629 1.38629 1.38629 1.38629 | |
3474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3475 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
3476 1.38629 1.38629 1.38629 1.38629 | |
3477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3478 17 2.57915 2.25909 2.64442 0.28946 17 - - | |
3479 1.38629 1.38629 1.38629 1.38629 | |
3480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3481 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
3482 1.38629 1.38629 1.38629 1.38629 | |
3483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3484 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
3485 1.38629 1.38629 1.38629 1.38629 | |
3486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3487 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
3488 1.38629 1.38629 1.38629 1.38629 | |
3489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3490 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
3491 1.38629 1.38629 1.38629 1.38629 | |
3492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3493 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
3494 1.38629 1.38629 1.38629 1.38629 | |
3495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3496 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
3497 1.38629 1.38629 1.38629 1.38629 | |
3498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3499 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
3500 1.38629 1.38629 1.38629 1.38629 | |
3501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3502 25 1.89532 1.96405 1.06955 1.00436 25 - - | |
3503 1.38629 1.38629 1.38629 1.38629 | |
3504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3505 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
3506 1.38629 1.38629 1.38629 1.38629 | |
3507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3508 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
3509 1.38629 1.38629 1.38629 1.38629 | |
3510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3511 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
3512 1.38629 1.38629 1.38629 1.38629 | |
3513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3514 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
3515 1.38629 1.38629 1.38629 1.38629 | |
3516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3517 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
3518 1.38629 1.38629 1.38629 1.38629 | |
3519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3520 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
3521 1.38629 1.38629 1.38629 1.38629 | |
3522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3523 32 0.92825 2.28391 0.95698 2.13014 32 - - | |
3524 1.38629 1.38629 1.38629 1.38629 | |
3525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3526 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
3527 1.38629 1.38629 1.38629 1.38629 | |
3528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3529 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
3530 1.38629 1.38629 1.38629 1.38629 | |
3531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3532 35 2.15554 1.00938 2.23102 0.88601 35 - - | |
3533 1.38629 1.38629 1.38629 1.38629 | |
3534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3535 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
3536 1.38629 1.38629 1.38629 1.38629 | |
3537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3538 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
3539 1.38629 1.38629 1.38629 1.38629 | |
3540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3541 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
3542 1.38629 1.38629 1.38629 1.38629 | |
3543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3544 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
3545 1.38629 1.38629 1.38629 1.38629 | |
3546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3547 40 2.81865 0.23582 2.88868 2.35662 40 - - | |
3548 1.38629 1.38629 1.38629 1.38629 | |
3549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3550 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
3551 1.38629 1.38629 1.38629 1.38629 | |
3552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3553 42 0.23862 2.84929 2.43386 2.70756 42 - - | |
3554 1.38629 1.38629 1.38629 1.38629 | |
3555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3556 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
3557 1.38629 1.38629 1.38629 1.38629 | |
3558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3559 44 1.88179 1.10717 1.04597 1.79675 44 - - | |
3560 1.38629 1.38629 1.38629 1.38629 | |
3561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3562 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
3563 1.38629 1.38629 1.38629 1.38629 | |
3564 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
3565 // | |
3566 HMMER3/b [3.0 | March 2010] | |
3567 NAME 3_End_Alveolata_58S_end_oneb_long | |
3568 LENG 45 | |
3569 ALPH DNA | |
3570 RF no | |
3571 CS no | |
3572 MAP yes | |
3573 DATE Wed Feb 29 22:42:36 2012 | |
3574 NSEQ 2 | |
3575 EFFN 2.000000 | |
3576 CKSUM 470675090 | |
3577 STATS LOCAL MSV -7.4696 0.73050 | |
3578 STATS LOCAL VITERBI -8.4860 0.73050 | |
3579 STATS LOCAL FORWARD -3.6496 0.73050 | |
3580 HMM A C G T | |
3581 m->m m->i m->d i->m i->i d->m d->d | |
3582 COMPO 1.40317 1.51763 1.41931 1.22734 | |
3583 1.38629 1.38629 1.38629 1.38629 | |
3584 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
3585 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
3586 1.38629 1.38629 1.38629 1.38629 | |
3587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3588 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
3589 1.38629 1.38629 1.38629 1.38629 | |
3590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3591 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
3592 1.38629 1.38629 1.38629 1.38629 | |
3593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3594 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
3595 1.38629 1.38629 1.38629 1.38629 | |
3596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3597 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
3598 1.38629 1.38629 1.38629 1.38629 | |
3599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3600 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
3601 1.38629 1.38629 1.38629 1.38629 | |
3602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3603 7 2.15554 1.00938 2.23102 0.88601 7 - - | |
3604 1.38629 1.38629 1.38629 1.38629 | |
3605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3606 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
3607 1.38629 1.38629 1.38629 1.38629 | |
3608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3609 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
3610 1.38629 1.38629 1.38629 1.38629 | |
3611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3612 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
3613 1.38629 1.38629 1.38629 1.38629 | |
3614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3615 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
3616 1.38629 1.38629 1.38629 1.38629 | |
3617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3618 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
3619 1.38629 1.38629 1.38629 1.38629 | |
3620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3621 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
3622 1.38629 1.38629 1.38629 1.38629 | |
3623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3624 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
3625 1.38629 1.38629 1.38629 1.38629 | |
3626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3627 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
3628 1.38629 1.38629 1.38629 1.38629 | |
3629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3630 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
3631 1.38629 1.38629 1.38629 1.38629 | |
3632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3633 17 2.57915 2.25909 2.64442 0.28946 17 - - | |
3634 1.38629 1.38629 1.38629 1.38629 | |
3635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3636 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
3637 1.38629 1.38629 1.38629 1.38629 | |
3638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3639 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
3640 1.38629 1.38629 1.38629 1.38629 | |
3641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3642 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
3643 1.38629 1.38629 1.38629 1.38629 | |
3644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3645 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
3646 1.38629 1.38629 1.38629 1.38629 | |
3647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3648 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
3649 1.38629 1.38629 1.38629 1.38629 | |
3650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3651 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
3652 1.38629 1.38629 1.38629 1.38629 | |
3653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3654 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
3655 1.38629 1.38629 1.38629 1.38629 | |
3656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3657 25 2.57915 2.25909 2.64442 0.28946 25 - - | |
3658 1.38629 1.38629 1.38629 1.38629 | |
3659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3660 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
3661 1.38629 1.38629 1.38629 1.38629 | |
3662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3663 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
3664 1.38629 1.38629 1.38629 1.38629 | |
3665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3666 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
3667 1.38629 1.38629 1.38629 1.38629 | |
3668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3669 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
3670 1.38629 1.38629 1.38629 1.38629 | |
3671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3672 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
3673 1.38629 1.38629 1.38629 1.38629 | |
3674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3675 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
3676 1.38629 1.38629 1.38629 1.38629 | |
3677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3678 32 0.23862 2.84929 2.43386 2.70756 32 - - | |
3679 1.38629 1.38629 1.38629 1.38629 | |
3680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3681 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
3682 1.38629 1.38629 1.38629 1.38629 | |
3683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3684 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
3685 1.38629 1.38629 1.38629 1.38629 | |
3686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3687 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
3688 1.38629 1.38629 1.38629 1.38629 | |
3689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3690 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
3691 1.38629 1.38629 1.38629 1.38629 | |
3692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3693 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
3694 1.38629 1.38629 1.38629 1.38629 | |
3695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3696 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
3697 1.38629 1.38629 1.38629 1.38629 | |
3698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3699 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
3700 1.38629 1.38629 1.38629 1.38629 | |
3701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3702 40 2.81865 0.23582 2.88868 2.35662 40 - - | |
3703 1.38629 1.38629 1.38629 1.38629 | |
3704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3705 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
3706 1.38629 1.38629 1.38629 1.38629 | |
3707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3708 42 0.23862 2.84929 2.43386 2.70756 42 - - | |
3709 1.38629 1.38629 1.38629 1.38629 | |
3710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3711 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
3712 1.38629 1.38629 1.38629 1.38629 | |
3713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3714 44 1.03732 1.95876 1.96551 1.00928 44 - - | |
3715 1.38629 1.38629 1.38629 1.38629 | |
3716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3717 45 1.01448 1.11006 1.95471 1.79419 45 - - | |
3718 1.38629 1.38629 1.38629 1.38629 | |
3719 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
3720 // | |
3721 HMMER3/b [3.0 | March 2010] | |
3722 NAME 3_End_Alveolata_58S_end_onec_long | |
3723 LENG 45 | |
3724 ALPH DNA | |
3725 RF no | |
3726 CS no | |
3727 MAP yes | |
3728 DATE Wed Feb 29 22:42:41 2012 | |
3729 NSEQ 2 | |
3730 EFFN 2.000000 | |
3731 CKSUM 3218648575 | |
3732 STATS LOCAL MSV -7.4834 0.72855 | |
3733 STATS LOCAL VITERBI -8.3698 0.72855 | |
3734 STATS LOCAL FORWARD -3.5469 0.72855 | |
3735 HMM A C G T | |
3736 m->m m->i m->d i->m i->i d->m d->d | |
3737 COMPO 1.45349 1.57174 1.37327 1.18652 | |
3738 1.38629 1.38629 1.38629 1.38629 | |
3739 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
3740 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
3741 1.38629 1.38629 1.38629 1.38629 | |
3742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3743 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
3744 1.38629 1.38629 1.38629 1.38629 | |
3745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3746 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
3747 1.38629 1.38629 1.38629 1.38629 | |
3748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3749 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
3750 1.38629 1.38629 1.38629 1.38629 | |
3751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3752 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
3753 1.38629 1.38629 1.38629 1.38629 | |
3754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3755 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
3756 1.38629 1.38629 1.38629 1.38629 | |
3757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3758 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
3759 1.38629 1.38629 1.38629 1.38629 | |
3760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3761 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
3762 1.38629 1.38629 1.38629 1.38629 | |
3763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3764 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
3765 1.38629 1.38629 1.38629 1.38629 | |
3766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3767 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
3768 1.38629 1.38629 1.38629 1.38629 | |
3769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3770 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
3771 1.38629 1.38629 1.38629 1.38629 | |
3772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3773 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
3774 1.38629 1.38629 1.38629 1.38629 | |
3775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3776 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
3777 1.38629 1.38629 1.38629 1.38629 | |
3778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3779 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
3780 1.38629 1.38629 1.38629 1.38629 | |
3781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3782 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
3783 1.38629 1.38629 1.38629 1.38629 | |
3784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3785 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
3786 1.38629 1.38629 1.38629 1.38629 | |
3787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3788 17 2.57915 2.25909 2.64442 0.28946 17 - - | |
3789 1.38629 1.38629 1.38629 1.38629 | |
3790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3791 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
3792 1.38629 1.38629 1.38629 1.38629 | |
3793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3794 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
3795 1.38629 1.38629 1.38629 1.38629 | |
3796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3797 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
3798 1.38629 1.38629 1.38629 1.38629 | |
3799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3800 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
3801 1.38629 1.38629 1.38629 1.38629 | |
3802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3803 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
3804 1.38629 1.38629 1.38629 1.38629 | |
3805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3806 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
3807 1.38629 1.38629 1.38629 1.38629 | |
3808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3809 24 2.57915 2.25909 2.64442 0.28946 24 - - | |
3810 1.38629 1.38629 1.38629 1.38629 | |
3811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3812 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
3813 1.38629 1.38629 1.38629 1.38629 | |
3814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3815 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
3816 1.38629 1.38629 1.38629 1.38629 | |
3817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3818 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
3819 1.38629 1.38629 1.38629 1.38629 | |
3820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3821 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
3822 1.38629 1.38629 1.38629 1.38629 | |
3823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3824 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
3825 1.38629 1.38629 1.38629 1.38629 | |
3826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3827 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
3828 1.38629 1.38629 1.38629 1.38629 | |
3829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3830 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
3831 1.38629 1.38629 1.38629 1.38629 | |
3832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3833 32 0.23862 2.84929 2.43386 2.70756 32 - - | |
3834 1.38629 1.38629 1.38629 1.38629 | |
3835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3836 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
3837 1.38629 1.38629 1.38629 1.38629 | |
3838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3839 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
3840 1.38629 1.38629 1.38629 1.38629 | |
3841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3842 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
3843 1.38629 1.38629 1.38629 1.38629 | |
3844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3845 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
3846 1.38629 1.38629 1.38629 1.38629 | |
3847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3848 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
3849 1.38629 1.38629 1.38629 1.38629 | |
3850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3851 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
3852 1.38629 1.38629 1.38629 1.38629 | |
3853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3854 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
3855 1.38629 1.38629 1.38629 1.38629 | |
3856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3857 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
3858 1.38629 1.38629 1.38629 1.38629 | |
3859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3860 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
3861 1.38629 1.38629 1.38629 1.38629 | |
3862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3863 42 0.23862 2.84929 2.43386 2.70756 42 - - | |
3864 1.38629 1.38629 1.38629 1.38629 | |
3865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3866 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
3867 1.38629 1.38629 1.38629 1.38629 | |
3868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3869 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
3870 1.38629 1.38629 1.38629 1.38629 | |
3871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3872 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
3873 1.38629 1.38629 1.38629 1.38629 | |
3874 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
3875 // | |
3876 HMMER3/b [3.0 | March 2010] | |
3877 NAME 3_End_Alveolata_58S_end_sevena_long | |
3878 LENG 45 | |
3879 ALPH DNA | |
3880 RF no | |
3881 CS no | |
3882 MAP yes | |
3883 DATE Wed Feb 29 22:48:25 2012 | |
3884 NSEQ 2 | |
3885 EFFN 2.000000 | |
3886 CKSUM 1500803962 | |
3887 STATS LOCAL MSV -7.4752 0.72898 | |
3888 STATS LOCAL VITERBI -8.3128 0.72898 | |
3889 STATS LOCAL FORWARD -3.5618 0.72898 | |
3890 HMM A C G T | |
3891 m->m m->i m->d i->m i->i d->m d->d | |
3892 COMPO 1.51945 1.36263 1.43442 1.24854 | |
3893 1.38629 1.38629 1.38629 1.38629 | |
3894 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
3895 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
3896 1.38629 1.38629 1.38629 1.38629 | |
3897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3898 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
3899 1.38629 1.38629 1.38629 1.38629 | |
3900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3901 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
3902 1.38629 1.38629 1.38629 1.38629 | |
3903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3904 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
3905 1.38629 1.38629 1.38629 1.38629 | |
3906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3907 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
3908 1.38629 1.38629 1.38629 1.38629 | |
3909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3910 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
3911 1.38629 1.38629 1.38629 1.38629 | |
3912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3913 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
3914 1.38629 1.38629 1.38629 1.38629 | |
3915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3916 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
3917 1.38629 1.38629 1.38629 1.38629 | |
3918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3919 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
3920 1.38629 1.38629 1.38629 1.38629 | |
3921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3922 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
3923 1.38629 1.38629 1.38629 1.38629 | |
3924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3925 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
3926 1.38629 1.38629 1.38629 1.38629 | |
3927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3928 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
3929 1.38629 1.38629 1.38629 1.38629 | |
3930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3931 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
3932 1.38629 1.38629 1.38629 1.38629 | |
3933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3934 14 0.23862 2.84929 2.43386 2.70756 14 - - | |
3935 1.38629 1.38629 1.38629 1.38629 | |
3936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3937 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
3938 1.38629 1.38629 1.38629 1.38629 | |
3939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3940 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
3941 1.38629 1.38629 1.38629 1.38629 | |
3942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3943 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
3944 1.38629 1.38629 1.38629 1.38629 | |
3945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3946 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
3947 1.38629 1.38629 1.38629 1.38629 | |
3948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3949 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
3950 1.38629 1.38629 1.38629 1.38629 | |
3951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3952 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
3953 1.38629 1.38629 1.38629 1.38629 | |
3954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3955 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
3956 1.38629 1.38629 1.38629 1.38629 | |
3957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3958 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
3959 1.38629 1.38629 1.38629 1.38629 | |
3960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3961 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
3962 1.38629 1.38629 1.38629 1.38629 | |
3963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3964 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
3965 1.38629 1.38629 1.38629 1.38629 | |
3966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3967 25 2.57915 2.25909 2.64442 0.28946 25 - - | |
3968 1.38629 1.38629 1.38629 1.38629 | |
3969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3970 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
3971 1.38629 1.38629 1.38629 1.38629 | |
3972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3973 27 0.23862 2.84929 2.43386 2.70756 27 - - | |
3974 1.38629 1.38629 1.38629 1.38629 | |
3975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3976 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
3977 1.38629 1.38629 1.38629 1.38629 | |
3978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3979 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
3980 1.38629 1.38629 1.38629 1.38629 | |
3981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3982 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
3983 1.38629 1.38629 1.38629 1.38629 | |
3984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3985 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
3986 1.38629 1.38629 1.38629 1.38629 | |
3987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3988 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
3989 1.38629 1.38629 1.38629 1.38629 | |
3990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3991 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
3992 1.38629 1.38629 1.38629 1.38629 | |
3993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3994 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
3995 1.38629 1.38629 1.38629 1.38629 | |
3996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
3997 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
3998 1.38629 1.38629 1.38629 1.38629 | |
3999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4000 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
4001 1.38629 1.38629 1.38629 1.38629 | |
4002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4003 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
4004 1.38629 1.38629 1.38629 1.38629 | |
4005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4006 38 2.15554 1.00938 2.23102 0.88601 38 - - | |
4007 1.38629 1.38629 1.38629 1.38629 | |
4008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4009 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
4010 1.38629 1.38629 1.38629 1.38629 | |
4011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4012 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
4013 1.38629 1.38629 1.38629 1.38629 | |
4014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4015 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
4016 1.38629 1.38629 1.38629 1.38629 | |
4017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4018 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
4019 1.38629 1.38629 1.38629 1.38629 | |
4020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4021 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
4022 1.38629 1.38629 1.38629 1.38629 | |
4023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4024 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
4025 1.38629 1.38629 1.38629 1.38629 | |
4026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4027 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
4028 1.38629 1.38629 1.38629 1.38629 | |
4029 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
4030 // | |
4031 HMMER3/b [3.0 | March 2010] | |
4032 NAME 3_End_Alveolata_58S_end_sevenb_long | |
4033 LENG 45 | |
4034 ALPH DNA | |
4035 RF no | |
4036 CS no | |
4037 MAP yes | |
4038 DATE Wed Feb 29 22:48:32 2012 | |
4039 NSEQ 2 | |
4040 EFFN 2.000000 | |
4041 CKSUM 3235530884 | |
4042 STATS LOCAL MSV -7.4473 0.72886 | |
4043 STATS LOCAL VITERBI -8.3269 0.72886 | |
4044 STATS LOCAL FORWARD -3.6806 0.72886 | |
4045 HMM A C G T | |
4046 m->m m->i m->d i->m i->i d->m d->d | |
4047 COMPO 1.51904 1.26407 1.41546 1.36351 | |
4048 1.38629 1.38629 1.38629 1.38629 | |
4049 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
4050 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
4051 1.38629 1.38629 1.38629 1.38629 | |
4052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4053 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
4054 1.38629 1.38629 1.38629 1.38629 | |
4055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4056 3 2.53331 3.02441 0.20344 2.88069 3 - - | |
4057 1.38629 1.38629 1.38629 1.38629 | |
4058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4059 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
4060 1.38629 1.38629 1.38629 1.38629 | |
4061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4062 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
4063 1.38629 1.38629 1.38629 1.38629 | |
4064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4065 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
4066 1.38629 1.38629 1.38629 1.38629 | |
4067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4068 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
4069 1.38629 1.38629 1.38629 1.38629 | |
4070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4071 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
4072 1.38629 1.38629 1.38629 1.38629 | |
4073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4074 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
4075 1.38629 1.38629 1.38629 1.38629 | |
4076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4077 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
4078 1.38629 1.38629 1.38629 1.38629 | |
4079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4080 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
4081 1.38629 1.38629 1.38629 1.38629 | |
4082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4083 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
4084 1.38629 1.38629 1.38629 1.38629 | |
4085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4086 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
4087 1.38629 1.38629 1.38629 1.38629 | |
4088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4089 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
4090 1.38629 1.38629 1.38629 1.38629 | |
4091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4092 15 2.81865 0.23582 2.88868 2.35662 15 - - | |
4093 1.38629 1.38629 1.38629 1.38629 | |
4094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4095 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
4096 1.38629 1.38629 1.38629 1.38629 | |
4097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4098 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
4099 1.38629 1.38629 1.38629 1.38629 | |
4100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4101 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
4102 1.38629 1.38629 1.38629 1.38629 | |
4103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4104 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
4105 1.38629 1.38629 1.38629 1.38629 | |
4106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4107 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
4108 1.38629 1.38629 1.38629 1.38629 | |
4109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4110 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
4111 1.38629 1.38629 1.38629 1.38629 | |
4112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4113 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
4114 1.38629 1.38629 1.38629 1.38629 | |
4115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4116 23 2.81865 0.23582 2.88868 2.35662 23 - - | |
4117 1.38629 1.38629 1.38629 1.38629 | |
4118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4119 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
4120 1.38629 1.38629 1.38629 1.38629 | |
4121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4122 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
4123 1.38629 1.38629 1.38629 1.38629 | |
4124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4125 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
4126 1.38629 1.38629 1.38629 1.38629 | |
4127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4128 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
4129 1.38629 1.38629 1.38629 1.38629 | |
4130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4131 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
4132 1.38629 1.38629 1.38629 1.38629 | |
4133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4134 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
4135 1.38629 1.38629 1.38629 1.38629 | |
4136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4137 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
4138 1.38629 1.38629 1.38629 1.38629 | |
4139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4140 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
4141 1.38629 1.38629 1.38629 1.38629 | |
4142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4143 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
4144 1.38629 1.38629 1.38629 1.38629 | |
4145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4146 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
4147 1.38629 1.38629 1.38629 1.38629 | |
4148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4149 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
4150 1.38629 1.38629 1.38629 1.38629 | |
4151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4152 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
4153 1.38629 1.38629 1.38629 1.38629 | |
4154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4155 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
4156 1.38629 1.38629 1.38629 1.38629 | |
4157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4158 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
4159 1.38629 1.38629 1.38629 1.38629 | |
4160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4161 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
4162 1.38629 1.38629 1.38629 1.38629 | |
4163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4164 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
4165 1.38629 1.38629 1.38629 1.38629 | |
4166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4167 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
4168 1.38629 1.38629 1.38629 1.38629 | |
4169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4170 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
4171 1.38629 1.38629 1.38629 1.38629 | |
4172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4173 42 1.88179 1.10717 1.04597 1.79675 42 - - | |
4174 1.38629 1.38629 1.38629 1.38629 | |
4175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4176 43 2.81865 0.23582 2.88868 2.35662 43 - - | |
4177 1.38629 1.38629 1.38629 1.38629 | |
4178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4179 44 0.23862 2.84929 2.43386 2.70756 44 - - | |
4180 1.38629 1.38629 1.38629 1.38629 | |
4181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4182 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
4183 1.38629 1.38629 1.38629 1.38629 | |
4184 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
4185 // | |
4186 HMMER3/b [3.0 | March 2010] | |
4187 NAME 3_End_Alveolata_58S_end_sevenc_long | |
4188 LENG 45 | |
4189 ALPH DNA | |
4190 RF no | |
4191 CS no | |
4192 MAP yes | |
4193 DATE Wed Feb 29 22:48:38 2012 | |
4194 NSEQ 2 | |
4195 EFFN 2.000000 | |
4196 CKSUM 677190326 | |
4197 STATS LOCAL MSV -7.4805 0.73144 | |
4198 STATS LOCAL VITERBI -8.3647 0.73144 | |
4199 STATS LOCAL FORWARD -3.3920 0.73144 | |
4200 HMM A C G T | |
4201 m->m m->i m->d i->m i->i d->m d->d | |
4202 COMPO 1.49596 1.51275 1.43591 1.14645 | |
4203 1.38629 1.38629 1.38629 1.38629 | |
4204 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
4205 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
4206 1.38629 1.38629 1.38629 1.38629 | |
4207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4208 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
4209 1.38629 1.38629 1.38629 1.38629 | |
4210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4211 3 2.57915 2.25909 2.64442 0.28946 3 - - | |
4212 1.38629 1.38629 1.38629 1.38629 | |
4213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4214 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
4215 1.38629 1.38629 1.38629 1.38629 | |
4216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4217 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
4218 1.38629 1.38629 1.38629 1.38629 | |
4219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4220 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
4221 1.38629 1.38629 1.38629 1.38629 | |
4222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4223 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
4224 1.38629 1.38629 1.38629 1.38629 | |
4225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4226 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
4227 1.38629 1.38629 1.38629 1.38629 | |
4228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4229 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
4230 1.38629 1.38629 1.38629 1.38629 | |
4231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4232 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
4233 1.38629 1.38629 1.38629 1.38629 | |
4234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4235 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
4236 1.38629 1.38629 1.38629 1.38629 | |
4237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4238 12 2.15554 1.00938 2.23102 0.88601 12 - - | |
4239 1.38629 1.38629 1.38629 1.38629 | |
4240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4241 13 1.01448 1.11006 1.95471 1.79419 13 - - | |
4242 1.38629 1.38629 1.38629 1.38629 | |
4243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4244 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
4245 1.38629 1.38629 1.38629 1.38629 | |
4246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4247 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
4248 1.38629 1.38629 1.38629 1.38629 | |
4249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4250 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
4251 1.38629 1.38629 1.38629 1.38629 | |
4252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4253 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
4254 1.38629 1.38629 1.38629 1.38629 | |
4255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4256 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
4257 1.38629 1.38629 1.38629 1.38629 | |
4258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4259 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
4260 1.38629 1.38629 1.38629 1.38629 | |
4261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4262 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
4263 1.38629 1.38629 1.38629 1.38629 | |
4264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4265 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
4266 1.38629 1.38629 1.38629 1.38629 | |
4267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4268 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
4269 1.38629 1.38629 1.38629 1.38629 | |
4270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4271 23 0.92825 2.28391 0.95698 2.13014 23 - - | |
4272 1.38629 1.38629 1.38629 1.38629 | |
4273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4274 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
4275 1.38629 1.38629 1.38629 1.38629 | |
4276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4277 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
4278 1.38629 1.38629 1.38629 1.38629 | |
4279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4280 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
4281 1.38629 1.38629 1.38629 1.38629 | |
4282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4283 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
4284 1.38629 1.38629 1.38629 1.38629 | |
4285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4286 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
4287 1.38629 1.38629 1.38629 1.38629 | |
4288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4289 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
4290 1.38629 1.38629 1.38629 1.38629 | |
4291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4292 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
4293 1.38629 1.38629 1.38629 1.38629 | |
4294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4295 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
4296 1.38629 1.38629 1.38629 1.38629 | |
4297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4298 32 0.23862 2.84929 2.43386 2.70756 32 - - | |
4299 1.38629 1.38629 1.38629 1.38629 | |
4300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4301 33 0.23862 2.84929 2.43386 2.70756 33 - - | |
4302 1.38629 1.38629 1.38629 1.38629 | |
4303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4304 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
4305 1.38629 1.38629 1.38629 1.38629 | |
4306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4307 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
4308 1.38629 1.38629 1.38629 1.38629 | |
4309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4310 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
4311 1.38629 1.38629 1.38629 1.38629 | |
4312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4313 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
4314 1.38629 1.38629 1.38629 1.38629 | |
4315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4316 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
4317 1.38629 1.38629 1.38629 1.38629 | |
4318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4319 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
4320 1.38629 1.38629 1.38629 1.38629 | |
4321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4322 40 2.81865 0.23582 2.88868 2.35662 40 - - | |
4323 1.38629 1.38629 1.38629 1.38629 | |
4324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4325 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
4326 1.38629 1.38629 1.38629 1.38629 | |
4327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4328 42 0.23862 2.84929 2.43386 2.70756 42 - - | |
4329 1.38629 1.38629 1.38629 1.38629 | |
4330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4331 43 2.57915 2.25909 2.64442 0.28946 43 - - | |
4332 1.38629 1.38629 1.38629 1.38629 | |
4333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4334 44 0.92825 2.28391 0.95698 2.13014 44 - - | |
4335 1.38629 1.38629 1.38629 1.38629 | |
4336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
4337 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
4338 1.38629 1.38629 1.38629 1.38629 | |
4339 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
4340 // | |
4341 HMMER3/b [3.0 | March 2010] | |
4342 NAME 3_End_Alveolata_58S_end_seventeen_long | |
4343 LENG 45 | |
4344 ALPH DNA | |
4345 RF no | |
4346 CS no | |
4347 MAP yes | |
4348 DATE Wed Feb 29 22:55:31 2012 | |
4349 NSEQ 3 | |
4350 EFFN 3.000000 | |
4351 CKSUM 252461474 | |
4352 STATS LOCAL MSV -7.9979 0.72109 | |
4353 STATS LOCAL VITERBI -7.8792 0.72109 | |
4354 STATS LOCAL FORWARD -3.7137 0.72109 | |
4355 HMM A C G T | |
4356 m->m m->i m->d i->m i->i d->m d->d | |
4357 COMPO 1.11444 1.67387 1.87820 1.10408 | |
4358 1.38629 1.38629 1.38629 1.38629 | |
4359 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
4360 1 3.30705 0.14631 3.36166 2.73626 1 - - | |
4361 1.38629 1.38629 1.38629 1.38629 | |
4362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4363 2 2.86982 3.47591 0.13017 3.36931 2 - - | |
4364 1.38629 1.38629 1.38629 1.38629 | |
4365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4366 3 3.30705 0.14631 3.36166 2.73626 3 - - | |
4367 1.38629 1.38629 1.38629 1.38629 | |
4368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4369 4 0.15719 3.27118 2.73043 3.16274 4 - - | |
4370 1.38629 1.38629 1.38629 1.38629 | |
4371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4372 5 0.15719 3.27118 2.73043 3.16274 5 - - | |
4373 1.38629 1.38629 1.38629 1.38629 | |
4374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4375 6 0.15719 3.27118 2.73043 3.16274 6 - - | |
4376 1.38629 1.38629 1.38629 1.38629 | |
4377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4378 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
4379 1.38629 1.38629 1.38629 1.38629 | |
4380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4381 8 0.15719 3.27118 2.73043 3.16274 8 - - | |
4382 1.38629 1.38629 1.38629 1.38629 | |
4383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4384 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
4385 1.38629 1.38629 1.38629 1.38629 | |
4386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4387 10 3.30705 0.14631 3.36166 2.73626 10 - - | |
4388 1.38629 1.38629 1.38629 1.38629 | |
4389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4390 11 0.15719 3.27118 2.73043 3.16274 11 - - | |
4391 1.38629 1.38629 1.38629 1.38629 | |
4392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4393 12 2.86982 3.47591 0.13017 3.36931 12 - - | |
4394 1.38629 1.38629 1.38629 1.38629 | |
4395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4396 13 2.97980 2.52563 3.03204 0.19727 13 - - | |
4397 1.38629 1.38629 1.38629 1.38629 | |
4398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4399 14 0.15719 3.27118 2.73043 3.16274 14 - - | |
4400 1.38629 1.38629 1.38629 1.38629 | |
4401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4402 15 0.15719 3.27118 2.73043 3.16274 15 - - | |
4403 1.38629 1.38629 1.38629 1.38629 | |
4404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4405 16 2.97980 2.52563 3.03204 0.19727 16 - - | |
4406 1.38629 1.38629 1.38629 1.38629 | |
4407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4408 17 2.97980 2.52563 3.03204 0.19727 17 - - | |
4409 1.38629 1.38629 1.38629 1.38629 | |
4410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4411 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
4412 1.38629 1.38629 1.38629 1.38629 | |
4413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4414 19 0.15719 3.27118 2.73043 3.16274 19 - - | |
4415 1.38629 1.38629 1.38629 1.38629 | |
4416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4417 20 3.30705 0.14631 3.36166 2.73626 20 - - | |
4418 1.38629 1.38629 1.38629 1.38629 | |
4419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4420 21 0.15719 3.27118 2.73043 3.16274 21 - - | |
4421 1.38629 1.38629 1.38629 1.38629 | |
4422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4423 22 2.97980 2.52563 3.03204 0.19727 22 - - | |
4424 1.38629 1.38629 1.38629 1.38629 | |
4425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4426 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
4427 1.38629 1.38629 1.38629 1.38629 | |
4428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4429 24 0.15719 3.27118 2.73043 3.16274 24 - - | |
4430 1.38629 1.38629 1.38629 1.38629 | |
4431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4432 25 3.30705 0.14631 3.36166 2.73626 25 - - | |
4433 1.38629 1.38629 1.38629 1.38629 | |
4434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4435 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
4436 1.38629 1.38629 1.38629 1.38629 | |
4437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4438 27 0.15719 3.27118 2.73043 3.16274 27 - - | |
4439 1.38629 1.38629 1.38629 1.38629 | |
4440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4441 28 2.97980 2.52563 3.03204 0.19727 28 - - | |
4442 1.38629 1.38629 1.38629 1.38629 | |
4443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4444 29 0.15719 3.27118 2.73043 3.16274 29 - - | |
4445 1.38629 1.38629 1.38629 1.38629 | |
4446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4447 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
4448 1.38629 1.38629 1.38629 1.38629 | |
4449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4450 31 2.97980 2.52563 3.03204 0.19727 31 - - | |
4451 1.38629 1.38629 1.38629 1.38629 | |
4452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4453 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
4454 1.38629 1.38629 1.38629 1.38629 | |
4455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4456 33 0.15719 3.27118 2.73043 3.16274 33 - - | |
4457 1.38629 1.38629 1.38629 1.38629 | |
4458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4459 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
4460 1.38629 1.38629 1.38629 1.38629 | |
4461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4462 35 0.15719 3.27118 2.73043 3.16274 35 - - | |
4463 1.38629 1.38629 1.38629 1.38629 | |
4464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4465 36 2.97980 2.52563 3.03204 0.19727 36 - - | |
4466 1.38629 1.38629 1.38629 1.38629 | |
4467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4468 37 3.30705 0.14631 3.36166 2.73626 37 - - | |
4469 1.38629 1.38629 1.38629 1.38629 | |
4470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4471 38 0.15719 3.27118 2.73043 3.16274 38 - - | |
4472 1.38629 1.38629 1.38629 1.38629 | |
4473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4474 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
4475 1.38629 1.38629 1.38629 1.38629 | |
4476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4477 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
4478 1.38629 1.38629 1.38629 1.38629 | |
4479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4480 41 2.86982 3.47591 0.13017 3.36931 41 - - | |
4481 1.38629 1.38629 1.38629 1.38629 | |
4482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4483 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
4484 1.38629 1.38629 1.38629 1.38629 | |
4485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4486 43 3.30705 0.14631 3.36166 2.73626 43 - - | |
4487 1.38629 1.38629 1.38629 1.38629 | |
4488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4489 44 2.97980 2.52563 3.03204 0.19727 44 - - | |
4490 1.38629 1.38629 1.38629 1.38629 | |
4491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4492 45 0.15719 3.27118 2.73043 3.16274 45 - - | |
4493 1.38629 1.38629 1.38629 1.38629 | |
4494 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
4495 // | |
4496 HMMER3/b [3.0 | March 2010] | |
4497 NAME 3_End_Alveolata_58S_end_six_long | |
4498 LENG 45 | |
4499 ALPH DNA | |
4500 RF no | |
4501 CS no | |
4502 MAP yes | |
4503 DATE Wed Feb 29 22:48:16 2012 | |
4504 NSEQ 6 | |
4505 EFFN 3.565430 | |
4506 CKSUM 1641114563 | |
4507 STATS LOCAL MSV -7.2926 0.71932 | |
4508 STATS LOCAL VITERBI -7.7152 0.71932 | |
4509 STATS LOCAL FORWARD -3.9190 0.71932 | |
4510 HMM A C G T | |
4511 m->m m->i m->d i->m i->i d->m d->d | |
4512 COMPO 1.71905 1.32555 1.24979 1.31474 | |
4513 1.38629 1.38629 1.38629 1.38629 | |
4514 0.03531 4.05446 4.05446 1.46634 0.26236 0.00000 * | |
4515 1 2.44789 0.93687 2.51948 0.81833 1 - - | |
4516 1.38629 1.38629 1.38629 1.38629 | |
4517 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4518 2 0.13242 3.45492 2.85021 3.36375 2 - - | |
4519 1.38629 1.38629 1.38629 1.38629 | |
4520 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4521 3 3.51892 0.12042 3.56466 2.89106 3 - - | |
4522 1.38629 1.38629 1.38629 1.38629 | |
4523 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4524 4 3.16462 2.64340 3.20984 0.16690 4 - - | |
4525 1.38629 1.38629 1.38629 1.38629 | |
4526 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4527 5 3.16462 2.64340 3.20984 0.16690 5 - - | |
4528 1.38629 1.38629 1.38629 1.38629 | |
4529 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4530 6 3.16462 2.64340 3.20984 0.16690 6 - - | |
4531 1.38629 1.38629 1.38629 1.38629 | |
4532 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4533 7 3.51892 0.12042 3.56466 2.89106 7 - - | |
4534 1.38629 1.38629 1.38629 1.38629 | |
4535 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4536 8 2.99892 3.66295 0.10925 3.57556 8 - - | |
4537 1.38629 1.38629 1.38629 1.38629 | |
4538 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4539 9 2.99892 3.66295 0.10925 3.57556 9 - - | |
4540 1.38629 1.38629 1.38629 1.38629 | |
4541 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4542 10 2.99892 3.66295 0.10925 3.57556 10 - - | |
4543 1.38629 1.38629 1.38629 1.38629 | |
4544 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4545 11 0.13242 3.45492 2.85021 3.36375 11 - - | |
4546 1.38629 1.38629 1.38629 1.38629 | |
4547 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4548 12 3.16462 2.64340 3.20984 0.16690 12 - - | |
4549 1.38629 1.38629 1.38629 1.38629 | |
4550 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4551 13 0.13242 3.45492 2.85021 3.36375 13 - - | |
4552 1.38629 1.38629 1.38629 1.38629 | |
4553 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4554 14 2.99892 3.66295 0.10925 3.57556 14 - - | |
4555 1.38629 1.38629 1.38629 1.38629 | |
4556 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4557 15 3.51892 0.12042 3.56466 2.89106 15 - - | |
4558 1.38629 1.38629 1.38629 1.38629 | |
4559 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4560 16 3.51892 0.12042 3.56466 2.89106 16 - - | |
4561 1.38629 1.38629 1.38629 1.38629 | |
4562 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4563 17 3.16462 2.64340 3.20984 0.16690 17 - - | |
4564 1.38629 1.38629 1.38629 1.38629 | |
4565 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4566 18 3.16462 2.64340 3.20984 0.16690 18 - - | |
4567 1.38629 1.38629 1.38629 1.38629 | |
4568 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4569 19 2.99892 3.66295 0.10925 3.57556 19 - - | |
4570 1.38629 1.38629 1.38629 1.38629 | |
4571 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4572 20 3.51892 0.12042 3.56466 2.89106 20 - - | |
4573 1.38629 1.38629 1.38629 1.38629 | |
4574 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4575 21 0.13242 3.45492 2.85021 3.36375 21 - - | |
4576 1.38629 1.38629 1.38629 1.38629 | |
4577 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4578 22 0.13242 3.45492 2.85021 3.36375 22 - - | |
4579 1.38629 1.38629 1.38629 1.38629 | |
4580 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4581 23 2.99892 3.66295 0.10925 3.57556 23 - - | |
4582 1.38629 1.38629 1.38629 1.38629 | |
4583 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4584 24 2.54831 1.34093 2.61616 0.53256 24 - - | |
4585 1.38629 1.38629 1.38629 1.38629 | |
4586 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4587 25 2.99892 3.66295 0.10925 3.57556 25 - - | |
4588 1.38629 1.38629 1.38629 1.38629 | |
4589 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4590 26 3.16462 2.64340 3.20984 0.16690 26 - - | |
4591 1.38629 1.38629 1.38629 1.38629 | |
4592 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4593 27 2.99892 3.66295 0.10925 3.57556 27 - - | |
4594 1.38629 1.38629 1.38629 1.38629 | |
4595 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4596 28 3.51892 0.12042 3.56466 2.89106 28 - - | |
4597 1.38629 1.38629 1.38629 1.38629 | |
4598 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4599 29 3.51892 0.12042 3.56466 2.89106 29 - - | |
4600 1.38629 1.38629 1.38629 1.38629 | |
4601 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4602 30 3.16462 2.64340 3.20984 0.16690 30 - - | |
4603 1.38629 1.38629 1.38629 1.38629 | |
4604 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4605 31 2.99892 3.66295 0.10925 3.57556 31 - - | |
4606 1.38629 1.38629 1.38629 1.38629 | |
4607 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4608 32 3.51892 0.12042 3.56466 2.89106 32 - - | |
4609 1.38629 1.38629 1.38629 1.38629 | |
4610 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4611 33 2.99892 3.66295 0.10925 3.57556 33 - - | |
4612 1.38629 1.38629 1.38629 1.38629 | |
4613 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4614 34 3.16462 2.64340 3.20984 0.16690 34 - - | |
4615 1.38629 1.38629 1.38629 1.38629 | |
4616 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4617 35 2.54831 1.34093 2.61616 0.53256 35 - - | |
4618 1.38629 1.38629 1.38629 1.38629 | |
4619 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4620 36 2.99892 3.66295 0.10925 3.57556 36 - - | |
4621 1.38629 1.38629 1.38629 1.38629 | |
4622 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4623 37 2.99892 3.66295 0.10925 3.57556 37 - - | |
4624 1.38629 1.38629 1.38629 1.38629 | |
4625 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4626 38 3.51892 0.12042 3.56466 2.89106 38 - - | |
4627 1.38629 1.38629 1.38629 1.38629 | |
4628 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4629 39 2.99892 3.66295 0.10925 3.57556 39 - - | |
4630 1.38629 1.38629 1.38629 1.38629 | |
4631 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4632 40 3.16462 2.64340 3.20984 0.16690 40 - - | |
4633 1.38629 1.38629 1.38629 1.38629 | |
4634 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4635 41 3.51892 0.12042 3.56466 2.89106 41 - - | |
4636 1.38629 1.38629 1.38629 1.38629 | |
4637 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4638 42 3.16462 2.64340 3.20984 0.16690 42 - - | |
4639 1.38629 1.38629 1.38629 1.38629 | |
4640 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4641 43 0.13242 3.45492 2.85021 3.36375 43 - - | |
4642 1.38629 1.38629 1.38629 1.38629 | |
4643 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4644 44 3.51892 0.12042 3.56466 2.89106 44 - - | |
4645 1.38629 1.38629 1.38629 1.38629 | |
4646 0.03531 4.05446 4.05446 1.46634 0.26236 1.09861 0.40547 | |
4647 45 0.13242 3.45492 2.85021 3.36375 45 - - | |
4648 1.38629 1.38629 1.38629 1.38629 | |
4649 0.01781 4.03697 * 1.46634 0.26236 0.00000 * | |
4650 // | |
4651 HMMER3/b [3.0 | March 2010] | |
4652 NAME 3_End_Alveolata_58S_end_sixteena_long | |
4653 LENG 45 | |
4654 ALPH DNA | |
4655 RF no | |
4656 CS no | |
4657 MAP yes | |
4658 DATE Wed Feb 29 22:55:08 2012 | |
4659 NSEQ 3 | |
4660 EFFN 3.000000 | |
4661 CKSUM 3202956986 | |
4662 STATS LOCAL MSV -7.8599 0.72111 | |
4663 STATS LOCAL VITERBI -7.8497 0.72111 | |
4664 STATS LOCAL FORWARD -4.1451 0.72111 | |
4665 HMM A C G T | |
4666 m->m m->i m->d i->m i->i d->m d->d | |
4667 COMPO 1.35816 1.44270 1.58441 1.19895 | |
4668 1.38629 1.38629 1.38629 1.38629 | |
4669 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
4670 1 0.15719 3.27118 2.73043 3.16274 1 - - | |
4671 1.38629 1.38629 1.38629 1.38629 | |
4672 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4673 2 3.30705 0.14631 3.36166 2.73626 2 - - | |
4674 1.38629 1.38629 1.38629 1.38629 | |
4675 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4676 3 0.15719 3.27118 2.73043 3.16274 3 - - | |
4677 1.38629 1.38629 1.38629 1.38629 | |
4678 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4679 4 0.15719 3.27118 2.73043 3.16274 4 - - | |
4680 1.38629 1.38629 1.38629 1.38629 | |
4681 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4682 5 0.15719 3.27118 2.73043 3.16274 5 - - | |
4683 1.38629 1.38629 1.38629 1.38629 | |
4684 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4685 6 2.86982 3.47591 0.13017 3.36931 6 - - | |
4686 1.38629 1.38629 1.38629 1.38629 | |
4687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4688 7 2.86982 3.47591 0.13017 3.36931 7 - - | |
4689 1.38629 1.38629 1.38629 1.38629 | |
4690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4691 8 2.86982 3.47591 0.13017 3.36931 8 - - | |
4692 1.38629 1.38629 1.38629 1.38629 | |
4693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4694 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
4695 1.38629 1.38629 1.38629 1.38629 | |
4696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4697 10 0.15719 3.27118 2.73043 3.16274 10 - - | |
4698 1.38629 1.38629 1.38629 1.38629 | |
4699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4700 11 2.97980 2.52563 3.03204 0.19727 11 - - | |
4701 1.38629 1.38629 1.38629 1.38629 | |
4702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4703 12 2.97980 2.52563 3.03204 0.19727 12 - - | |
4704 1.38629 1.38629 1.38629 1.38629 | |
4705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4706 13 2.97980 2.52563 3.03204 0.19727 13 - - | |
4707 1.38629 1.38629 1.38629 1.38629 | |
4708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4709 14 0.15719 3.27118 2.73043 3.16274 14 - - | |
4710 1.38629 1.38629 1.38629 1.38629 | |
4711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4712 15 2.97980 2.52563 3.03204 0.19727 15 - - | |
4713 1.38629 1.38629 1.38629 1.38629 | |
4714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4715 16 3.30705 0.14631 3.36166 2.73626 16 - - | |
4716 1.38629 1.38629 1.38629 1.38629 | |
4717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4718 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
4719 1.38629 1.38629 1.38629 1.38629 | |
4720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4721 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
4722 1.38629 1.38629 1.38629 1.38629 | |
4723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4724 19 3.30705 0.14631 3.36166 2.73626 19 - - | |
4725 1.38629 1.38629 1.38629 1.38629 | |
4726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4727 20 2.97980 2.52563 3.03204 0.19727 20 - - | |
4728 1.38629 1.38629 1.38629 1.38629 | |
4729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4730 21 2.97980 2.52563 3.03204 0.19727 21 - - | |
4731 1.38629 1.38629 1.38629 1.38629 | |
4732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4733 22 2.97980 2.52563 3.03204 0.19727 22 - - | |
4734 1.38629 1.38629 1.38629 1.38629 | |
4735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4736 23 2.86982 3.47591 0.13017 3.36931 23 - - | |
4737 1.38629 1.38629 1.38629 1.38629 | |
4738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4739 24 2.97980 2.52563 3.03204 0.19727 24 - - | |
4740 1.38629 1.38629 1.38629 1.38629 | |
4741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4742 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
4743 1.38629 1.38629 1.38629 1.38629 | |
4744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4745 26 3.30705 0.14631 3.36166 2.73626 26 - - | |
4746 1.38629 1.38629 1.38629 1.38629 | |
4747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4748 27 0.15719 3.27118 2.73043 3.16274 27 - - | |
4749 1.38629 1.38629 1.38629 1.38629 | |
4750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4751 28 2.97980 2.52563 3.03204 0.19727 28 - - | |
4752 1.38629 1.38629 1.38629 1.38629 | |
4753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4754 29 0.15719 3.27118 2.73043 3.16274 29 - - | |
4755 1.38629 1.38629 1.38629 1.38629 | |
4756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4757 30 3.30705 0.14631 3.36166 2.73626 30 - - | |
4758 1.38629 1.38629 1.38629 1.38629 | |
4759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4760 31 0.54133 2.56226 1.37841 2.42004 31 - - | |
4761 1.38629 1.38629 1.38629 1.38629 | |
4762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4763 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
4764 1.38629 1.38629 1.38629 1.38629 | |
4765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4766 33 0.15719 3.27118 2.73043 3.16274 33 - - | |
4767 1.38629 1.38629 1.38629 1.38629 | |
4768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4769 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
4770 1.38629 1.38629 1.38629 1.38629 | |
4771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4772 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
4773 1.38629 1.38629 1.38629 1.38629 | |
4774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4775 36 0.15719 3.27118 2.73043 3.16274 36 - - | |
4776 1.38629 1.38629 1.38629 1.38629 | |
4777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4778 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
4779 1.38629 1.38629 1.38629 1.38629 | |
4780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4781 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
4782 1.38629 1.38629 1.38629 1.38629 | |
4783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4784 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
4785 1.38629 1.38629 1.38629 1.38629 | |
4786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4787 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
4788 1.38629 1.38629 1.38629 1.38629 | |
4789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4790 41 3.30705 0.14631 3.36166 2.73626 41 - - | |
4791 1.38629 1.38629 1.38629 1.38629 | |
4792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4793 42 2.86982 3.47591 0.13017 3.36931 42 - - | |
4794 1.38629 1.38629 1.38629 1.38629 | |
4795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4796 43 3.30705 0.14631 3.36166 2.73626 43 - - | |
4797 1.38629 1.38629 1.38629 1.38629 | |
4798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4799 44 2.97980 2.52563 3.03204 0.19727 44 - - | |
4800 1.38629 1.38629 1.38629 1.38629 | |
4801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
4802 45 3.30705 0.14631 3.36166 2.73626 45 - - | |
4803 1.38629 1.38629 1.38629 1.38629 | |
4804 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
4805 // | |
4806 HMMER3/b [3.0 | March 2010] | |
4807 NAME 3_End_Alveolata_58S_end_sixteenb_long | |
4808 LENG 45 | |
4809 ALPH DNA | |
4810 RF no | |
4811 CS no | |
4812 MAP yes | |
4813 DATE Wed Feb 29 22:55:15 2012 | |
4814 NSEQ 4 | |
4815 EFFN 3.339844 | |
4816 CKSUM 3480860732 | |
4817 STATS LOCAL MSV -8.0392 0.71933 | |
4818 STATS LOCAL VITERBI -7.6464 0.71933 | |
4819 STATS LOCAL FORWARD -4.2449 0.71933 | |
4820 HMM A C G T | |
4821 m->m m->i m->d i->m i->i d->m d->d | |
4822 COMPO 1.40398 1.37647 1.61533 1.19373 | |
4823 1.38629 1.38629 1.38629 1.38629 | |
4824 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 * | |
4825 1 0.14117 3.38574 2.80548 3.28793 1 - - | |
4826 1.38629 1.38629 1.38629 1.38629 | |
4827 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4828 2 3.43942 0.12946 3.48861 2.83359 2 - - | |
4829 1.38629 1.38629 1.38629 1.38629 | |
4830 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4831 3 0.14117 3.38574 2.80548 3.28793 3 - - | |
4832 1.38629 1.38629 1.38629 1.38629 | |
4833 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4834 4 0.14117 3.38574 2.80548 3.28793 4 - - | |
4835 1.38629 1.38629 1.38629 1.38629 | |
4836 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4837 5 0.14117 3.38574 2.80548 3.28793 5 - - | |
4838 1.38629 1.38629 1.38629 1.38629 | |
4839 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4840 6 2.95135 3.59331 0.11655 3.49856 6 - - | |
4841 1.38629 1.38629 1.38629 1.38629 | |
4842 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4843 7 2.95135 3.59331 0.11655 3.49856 7 - - | |
4844 1.38629 1.38629 1.38629 1.38629 | |
4845 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4846 8 2.95135 3.59331 0.11655 3.49856 8 - - | |
4847 1.38629 1.38629 1.38629 1.38629 | |
4848 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4849 9 2.95135 3.59331 0.11655 3.49856 9 - - | |
4850 1.38629 1.38629 1.38629 1.38629 | |
4851 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4852 10 0.14117 3.38574 2.80548 3.28793 10 - - | |
4853 1.38629 1.38629 1.38629 1.38629 | |
4854 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4855 11 3.09414 2.59866 3.14209 0.17779 11 - - | |
4856 1.38629 1.38629 1.38629 1.38629 | |
4857 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4858 12 3.43942 0.12946 3.48861 2.83359 12 - - | |
4859 1.38629 1.38629 1.38629 1.38629 | |
4860 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4861 13 3.09414 2.59866 3.14209 0.17779 13 - - | |
4862 1.38629 1.38629 1.38629 1.38629 | |
4863 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4864 14 3.09414 2.59866 3.14209 0.17779 14 - - | |
4865 1.38629 1.38629 1.38629 1.38629 | |
4866 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4867 15 3.09414 2.59866 3.14209 0.17779 15 - - | |
4868 1.38629 1.38629 1.38629 1.38629 | |
4869 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4870 16 3.43942 0.12946 3.48861 2.83359 16 - - | |
4871 1.38629 1.38629 1.38629 1.38629 | |
4872 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4873 17 3.43942 0.12946 3.48861 2.83359 17 - - | |
4874 1.38629 1.38629 1.38629 1.38629 | |
4875 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4876 18 3.09414 2.59866 3.14209 0.17779 18 - - | |
4877 1.38629 1.38629 1.38629 1.38629 | |
4878 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4879 19 3.43942 0.12946 3.48861 2.83359 19 - - | |
4880 1.38629 1.38629 1.38629 1.38629 | |
4881 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4882 20 3.09414 2.59866 3.14209 0.17779 20 - - | |
4883 1.38629 1.38629 1.38629 1.38629 | |
4884 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4885 21 3.09414 2.59866 3.14209 0.17779 21 - - | |
4886 1.38629 1.38629 1.38629 1.38629 | |
4887 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4888 22 3.09414 2.59866 3.14209 0.17779 22 - - | |
4889 1.38629 1.38629 1.38629 1.38629 | |
4890 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4891 23 2.95135 3.59331 0.11655 3.49856 23 - - | |
4892 1.38629 1.38629 1.38629 1.38629 | |
4893 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4894 24 3.09414 2.59866 3.14209 0.17779 24 - - | |
4895 1.38629 1.38629 1.38629 1.38629 | |
4896 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4897 25 0.14117 3.38574 2.80548 3.28793 25 - - | |
4898 1.38629 1.38629 1.38629 1.38629 | |
4899 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4900 26 3.43942 0.12946 3.48861 2.83359 26 - - | |
4901 1.38629 1.38629 1.38629 1.38629 | |
4902 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4903 27 0.14117 3.38574 2.80548 3.28793 27 - - | |
4904 1.38629 1.38629 1.38629 1.38629 | |
4905 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4906 28 3.09414 2.59866 3.14209 0.17779 28 - - | |
4907 1.38629 1.38629 1.38629 1.38629 | |
4908 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4909 29 0.14117 3.38574 2.80548 3.28793 29 - - | |
4910 1.38629 1.38629 1.38629 1.38629 | |
4911 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4912 30 3.43942 0.12946 3.48861 2.83359 30 - - | |
4913 1.38629 1.38629 1.38629 1.38629 | |
4914 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4915 31 0.14117 3.38574 2.80548 3.28793 31 - - | |
4916 1.38629 1.38629 1.38629 1.38629 | |
4917 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4918 32 3.09414 2.59866 3.14209 0.17779 32 - - | |
4919 1.38629 1.38629 1.38629 1.38629 | |
4920 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4921 33 0.14117 3.38574 2.80548 3.28793 33 - - | |
4922 1.38629 1.38629 1.38629 1.38629 | |
4923 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4924 34 3.09414 2.59866 3.14209 0.17779 34 - - | |
4925 1.38629 1.38629 1.38629 1.38629 | |
4926 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4927 35 3.43942 0.12946 3.48861 2.83359 35 - - | |
4928 1.38629 1.38629 1.38629 1.38629 | |
4929 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4930 36 0.14117 3.38574 2.80548 3.28793 36 - - | |
4931 1.38629 1.38629 1.38629 1.38629 | |
4932 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4933 37 2.95135 3.59331 0.11655 3.49856 37 - - | |
4934 1.38629 1.38629 1.38629 1.38629 | |
4935 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4936 38 3.09414 2.59866 3.14209 0.17779 38 - - | |
4937 1.38629 1.38629 1.38629 1.38629 | |
4938 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4939 39 2.95135 3.59331 0.11655 3.49856 39 - - | |
4940 1.38629 1.38629 1.38629 1.38629 | |
4941 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4942 40 3.09414 2.59866 3.14209 0.17779 40 - - | |
4943 1.38629 1.38629 1.38629 1.38629 | |
4944 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4945 41 3.43942 0.12946 3.48861 2.83359 41 - - | |
4946 1.38629 1.38629 1.38629 1.38629 | |
4947 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4948 42 2.95135 3.59331 0.11655 3.49856 42 - - | |
4949 1.38629 1.38629 1.38629 1.38629 | |
4950 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4951 43 3.43942 0.12946 3.48861 2.83359 43 - - | |
4952 1.38629 1.38629 1.38629 1.38629 | |
4953 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4954 44 3.09414 2.59866 3.14209 0.17779 44 - - | |
4955 1.38629 1.38629 1.38629 1.38629 | |
4956 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 | |
4957 45 3.43942 0.12946 3.48861 2.83359 45 - - | |
4958 1.38629 1.38629 1.38629 1.38629 | |
4959 0.01855 3.99634 * 1.46634 0.26236 0.00000 * | |
4960 // | |
4961 HMMER3/b [3.0 | March 2010] | |
4962 NAME 3_End_Alveolata_58S_end_thirteena_long | |
4963 LENG 45 | |
4964 ALPH DNA | |
4965 RF no | |
4966 CS no | |
4967 MAP yes | |
4968 DATE Wed Feb 29 22:53:44 2012 | |
4969 NSEQ 9 | |
4970 EFFN 3.335449 | |
4971 CKSUM 139984797 | |
4972 STATS LOCAL MSV -8.1484 0.71932 | |
4973 STATS LOCAL VITERBI -7.6823 0.71932 | |
4974 STATS LOCAL FORWARD -3.7855 0.71932 | |
4975 HMM A C G T | |
4976 m->m m->i m->d i->m i->i d->m d->d | |
4977 COMPO 1.48084 1.04177 1.71496 1.42815 | |
4978 1.38629 1.38629 1.38629 1.38629 | |
4979 0.03680 4.01376 4.01376 1.46634 0.26236 0.00000 * | |
4980 1 0.14136 3.38434 2.80457 3.28639 1 - - | |
4981 1.38629 1.38629 1.38629 1.38629 | |
4982 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4983 2 3.43781 0.12965 3.48707 2.83242 2 - - | |
4984 1.38629 1.38629 1.38629 1.38629 | |
4985 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4986 3 0.14136 3.38434 2.80457 3.28639 3 - - | |
4987 1.38629 1.38629 1.38629 1.38629 | |
4988 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4989 4 3.43781 0.12965 3.48707 2.83242 4 - - | |
4990 1.38629 1.38629 1.38629 1.38629 | |
4991 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4992 5 0.14136 3.38434 2.80457 3.28639 5 - - | |
4993 1.38629 1.38629 1.38629 1.38629 | |
4994 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4995 6 3.43781 0.12965 3.48707 2.83242 6 - - | |
4996 1.38629 1.38629 1.38629 1.38629 | |
4997 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
4998 7 3.43781 0.12965 3.48707 2.83242 7 - - | |
4999 1.38629 1.38629 1.38629 1.38629 | |
5000 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5001 8 0.14136 3.38434 2.80457 3.28639 8 - - | |
5002 1.38629 1.38629 1.38629 1.38629 | |
5003 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5004 9 3.43781 0.12965 3.48707 2.83242 9 - - | |
5005 1.38629 1.38629 1.38629 1.38629 | |
5006 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5007 10 3.43781 0.12965 3.48707 2.83242 10 - - | |
5008 1.38629 1.38629 1.38629 1.38629 | |
5009 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5010 11 3.09273 2.59776 3.14073 0.17801 11 - - | |
5011 1.38629 1.38629 1.38629 1.38629 | |
5012 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5013 12 3.43781 0.12965 3.48707 2.83242 12 - - | |
5014 1.38629 1.38629 1.38629 1.38629 | |
5015 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5016 13 3.09273 2.59776 3.14073 0.17801 13 - - | |
5017 1.38629 1.38629 1.38629 1.38629 | |
5018 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5019 14 2.95037 3.59189 0.11671 3.49699 14 - - | |
5020 1.38629 1.38629 1.38629 1.38629 | |
5021 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5022 15 3.43781 0.12965 3.48707 2.83242 15 - - | |
5023 1.38629 1.38629 1.38629 1.38629 | |
5024 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5025 16 3.09273 2.59776 3.14073 0.17801 16 - - | |
5026 1.38629 1.38629 1.38629 1.38629 | |
5027 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5028 17 3.09273 2.59776 3.14073 0.17801 17 - - | |
5029 1.38629 1.38629 1.38629 1.38629 | |
5030 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5031 18 2.95037 3.59189 0.11671 3.49699 18 - - | |
5032 1.38629 1.38629 1.38629 1.38629 | |
5033 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5034 19 3.43781 0.12965 3.48707 2.83242 19 - - | |
5035 1.38629 1.38629 1.38629 1.38629 | |
5036 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5037 20 0.14136 3.38434 2.80457 3.28639 20 - - | |
5038 1.38629 1.38629 1.38629 1.38629 | |
5039 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5040 21 3.00628 0.24684 3.06821 2.09759 21 - - | |
5041 1.38629 1.38629 1.38629 1.38629 | |
5042 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5043 22 2.95037 3.59189 0.11671 3.49699 22 - - | |
5044 1.38629 1.38629 1.38629 1.38629 | |
5045 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5046 23 3.09273 2.59776 3.14073 0.17801 23 - - | |
5047 1.38629 1.38629 1.38629 1.38629 | |
5048 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5049 24 2.95037 3.59189 0.11671 3.49699 24 - - | |
5050 1.38629 1.38629 1.38629 1.38629 | |
5051 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5052 25 2.95037 3.59189 0.11671 3.49699 25 - - | |
5053 1.38629 1.38629 1.38629 1.38629 | |
5054 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5055 26 3.09273 2.59776 3.14073 0.17801 26 - - | |
5056 1.38629 1.38629 1.38629 1.38629 | |
5057 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5058 27 0.14136 3.38434 2.80457 3.28639 27 - - | |
5059 1.38629 1.38629 1.38629 1.38629 | |
5060 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5061 28 3.43781 0.12965 3.48707 2.83242 28 - - | |
5062 1.38629 1.38629 1.38629 1.38629 | |
5063 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5064 29 3.09273 2.59776 3.14073 0.17801 29 - - | |
5065 1.38629 1.38629 1.38629 1.38629 | |
5066 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5067 30 3.43781 0.12965 3.48707 2.83242 30 - - | |
5068 1.38629 1.38629 1.38629 1.38629 | |
5069 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5070 31 3.43781 0.12965 3.48707 2.83242 31 - - | |
5071 1.38629 1.38629 1.38629 1.38629 | |
5072 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5073 32 3.43781 0.12965 3.48707 2.83242 32 - - | |
5074 1.38629 1.38629 1.38629 1.38629 | |
5075 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5076 33 0.14136 3.38434 2.80457 3.28639 33 - - | |
5077 1.38629 1.38629 1.38629 1.38629 | |
5078 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5079 34 2.82574 2.00897 2.88356 0.28679 34 - - | |
5080 1.38629 1.38629 1.38629 1.38629 | |
5081 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5082 35 3.09273 2.59776 3.14073 0.17801 35 - - | |
5083 1.38629 1.38629 1.38629 1.38629 | |
5084 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5085 36 3.09273 2.59776 3.14073 0.17801 36 - - | |
5086 1.38629 1.38629 1.38629 1.38629 | |
5087 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5088 37 3.43781 0.12965 3.48707 2.83242 37 - - | |
5089 1.38629 1.38629 1.38629 1.38629 | |
5090 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5091 38 0.14136 3.38434 2.80457 3.28639 38 - - | |
5092 1.38629 1.38629 1.38629 1.38629 | |
5093 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5094 39 2.95037 3.59189 0.11671 3.49699 39 - - | |
5095 1.38629 1.38629 1.38629 1.38629 | |
5096 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5097 40 3.09273 2.59776 3.14073 0.17801 40 - - | |
5098 1.38629 1.38629 1.38629 1.38629 | |
5099 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5100 41 2.95037 3.59189 0.11671 3.49699 41 - - | |
5101 1.38629 1.38629 1.38629 1.38629 | |
5102 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5103 42 0.14136 3.38434 2.80457 3.28639 42 - - | |
5104 1.38629 1.38629 1.38629 1.38629 | |
5105 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5106 43 0.14136 3.38434 2.80457 3.28639 43 - - | |
5107 1.38629 1.38629 1.38629 1.38629 | |
5108 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5109 44 3.43781 0.12965 3.48707 2.83242 44 - - | |
5110 1.38629 1.38629 1.38629 1.38629 | |
5111 0.03680 4.01376 4.01376 1.46634 0.26236 1.09861 0.40547 | |
5112 45 3.43781 0.12965 3.48707 2.83242 45 - - | |
5113 1.38629 1.38629 1.38629 1.38629 | |
5114 0.01857 3.99553 * 1.46634 0.26236 0.00000 * | |
5115 // | |
5116 HMMER3/b [3.0 | March 2010] | |
5117 NAME 3_End_Alveolata_58S_end_thirteenb_long | |
5118 LENG 45 | |
5119 ALPH DNA | |
5120 RF no | |
5121 CS no | |
5122 MAP yes | |
5123 DATE Wed Feb 29 22:53:51 2012 | |
5124 NSEQ 20 | |
5125 EFFN 3.344727 | |
5126 CKSUM 3926777842 | |
5127 STATS LOCAL MSV -8.0192 0.71933 | |
5128 STATS LOCAL VITERBI -7.8856 0.71933 | |
5129 STATS LOCAL FORWARD -3.6871 0.71933 | |
5130 HMM A C G T | |
5131 m->m m->i m->d i->m i->i d->m d->d | |
5132 COMPO 1.72605 0.97133 1.46172 1.55306 | |
5133 1.38629 1.38629 1.38629 1.38629 | |
5134 0.03674 4.01543 4.01543 1.46634 0.26236 0.00000 * | |
5135 1 0.14097 3.38729 2.80649 3.28963 1 - - | |
5136 1.38629 1.38629 1.38629 1.38629 | |
5137 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5138 2 3.44121 0.12925 3.49032 2.83489 2 - - | |
5139 1.38629 1.38629 1.38629 1.38629 | |
5140 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5141 3 0.14097 3.38729 2.80649 3.28963 3 - - | |
5142 1.38629 1.38629 1.38629 1.38629 | |
5143 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5144 4 3.44121 0.12925 3.49032 2.83489 4 - - | |
5145 1.38629 1.38629 1.38629 1.38629 | |
5146 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5147 5 0.14097 3.38729 2.80649 3.28963 5 - - | |
5148 1.38629 1.38629 1.38629 1.38629 | |
5149 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5150 6 3.44121 0.12925 3.49032 2.83489 6 - - | |
5151 1.38629 1.38629 1.38629 1.38629 | |
5152 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5153 7 3.44121 0.12925 3.49032 2.83489 7 - - | |
5154 1.38629 1.38629 1.38629 1.38629 | |
5155 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5156 8 2.95243 3.59489 0.11638 3.50030 8 - - | |
5157 1.38629 1.38629 1.38629 1.38629 | |
5158 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5159 9 3.44121 0.12925 3.49032 2.83489 9 - - | |
5160 1.38629 1.38629 1.38629 1.38629 | |
5161 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5162 10 3.44121 0.12925 3.49032 2.83489 10 - - | |
5163 1.38629 1.38629 1.38629 1.38629 | |
5164 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5165 11 3.09571 2.59966 3.14360 0.17754 11 - - | |
5166 1.38629 1.38629 1.38629 1.38629 | |
5167 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5168 12 3.44121 0.12925 3.49032 2.83489 12 - - | |
5169 1.38629 1.38629 1.38629 1.38629 | |
5170 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5171 13 3.09571 2.59966 3.14360 0.17754 13 - - | |
5172 1.38629 1.38629 1.38629 1.38629 | |
5173 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5174 14 2.95243 3.59489 0.11638 3.50030 14 - - | |
5175 1.38629 1.38629 1.38629 1.38629 | |
5176 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5177 15 3.44121 0.12925 3.49032 2.83489 15 - - | |
5178 1.38629 1.38629 1.38629 1.38629 | |
5179 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5180 16 3.09571 2.59966 3.14360 0.17754 16 - - | |
5181 1.38629 1.38629 1.38629 1.38629 | |
5182 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5183 17 3.44121 0.12925 3.49032 2.83489 17 - - | |
5184 1.38629 1.38629 1.38629 1.38629 | |
5185 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5186 18 2.95243 3.59489 0.11638 3.50030 18 - - | |
5187 1.38629 1.38629 1.38629 1.38629 | |
5188 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5189 19 3.44121 0.12925 3.49032 2.83489 19 - - | |
5190 1.38629 1.38629 1.38629 1.38629 | |
5191 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5192 20 0.14097 3.38729 2.80649 3.28963 20 - - | |
5193 1.38629 1.38629 1.38629 1.38629 | |
5194 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5195 21 2.88258 0.29778 2.94754 1.90330 21 - - | |
5196 1.38629 1.38629 1.38629 1.38629 | |
5197 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5198 22 2.95243 3.59489 0.11638 3.50030 22 - - | |
5199 1.38629 1.38629 1.38629 1.38629 | |
5200 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5201 23 3.44121 0.12925 3.49032 2.83489 23 - - | |
5202 1.38629 1.38629 1.38629 1.38629 | |
5203 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5204 24 2.95243 3.59489 0.11638 3.50030 24 - - | |
5205 1.38629 1.38629 1.38629 1.38629 | |
5206 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5207 25 2.95243 3.59489 0.11638 3.50030 25 - - | |
5208 1.38629 1.38629 1.38629 1.38629 | |
5209 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5210 26 3.09571 2.59966 3.14360 0.17754 26 - - | |
5211 1.38629 1.38629 1.38629 1.38629 | |
5212 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5213 27 0.14097 3.38729 2.80649 3.28963 27 - - | |
5214 1.38629 1.38629 1.38629 1.38629 | |
5215 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5216 28 3.44121 0.12925 3.49032 2.83489 28 - - | |
5217 1.38629 1.38629 1.38629 1.38629 | |
5218 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5219 29 3.09571 2.59966 3.14360 0.17754 29 - - | |
5220 1.38629 1.38629 1.38629 1.38629 | |
5221 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5222 30 3.44121 0.12925 3.49032 2.83489 30 - - | |
5223 1.38629 1.38629 1.38629 1.38629 | |
5224 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5225 31 3.44121 0.12925 3.49032 2.83489 31 - - | |
5226 1.38629 1.38629 1.38629 1.38629 | |
5227 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5228 32 3.44121 0.12925 3.49032 2.83489 32 - - | |
5229 1.38629 1.38629 1.38629 1.38629 | |
5230 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5231 33 2.95243 3.59489 0.11638 3.50030 33 - - | |
5232 1.38629 1.38629 1.38629 1.38629 | |
5233 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5234 34 3.09571 2.59966 3.14360 0.17754 34 - - | |
5235 1.38629 1.38629 1.38629 1.38629 | |
5236 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5237 35 3.09571 2.59966 3.14360 0.17754 35 - - | |
5238 1.38629 1.38629 1.38629 1.38629 | |
5239 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5240 36 3.09571 2.59966 3.14360 0.17754 36 - - | |
5241 1.38629 1.38629 1.38629 1.38629 | |
5242 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5243 37 3.44121 0.12925 3.49032 2.83489 37 - - | |
5244 1.38629 1.38629 1.38629 1.38629 | |
5245 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5246 38 0.14097 3.38729 2.80649 3.28963 38 - - | |
5247 1.38629 1.38629 1.38629 1.38629 | |
5248 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5249 39 2.95243 3.59489 0.11638 3.50030 39 - - | |
5250 1.38629 1.38629 1.38629 1.38629 | |
5251 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5252 40 3.09571 2.59966 3.14360 0.17754 40 - - | |
5253 1.38629 1.38629 1.38629 1.38629 | |
5254 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5255 41 2.95243 3.59489 0.11638 3.50030 41 - - | |
5256 1.38629 1.38629 1.38629 1.38629 | |
5257 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5258 42 0.14097 3.38729 2.80649 3.28963 42 - - | |
5259 1.38629 1.38629 1.38629 1.38629 | |
5260 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5261 43 2.95243 3.59489 0.11638 3.50030 43 - - | |
5262 1.38629 1.38629 1.38629 1.38629 | |
5263 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5264 44 3.03924 0.23563 3.10030 2.14542 44 - - | |
5265 1.38629 1.38629 1.38629 1.38629 | |
5266 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 | |
5267 45 2.38711 0.31887 2.45124 2.35442 45 - - | |
5268 1.38629 1.38629 1.38629 1.38629 | |
5269 0.01854 3.99723 * 1.46634 0.26236 0.00000 * | |
5270 // | |
5271 HMMER3/b [3.0 | March 2010] | |
5272 NAME 3_End_Alveolata_58S_end_thirteenbb_long | |
5273 LENG 45 | |
5274 ALPH DNA | |
5275 RF no | |
5276 CS no | |
5277 MAP yes | |
5278 DATE Wed Feb 29 22:53:55 2012 | |
5279 NSEQ 3 | |
5280 EFFN 3.000000 | |
5281 CKSUM 1469591864 | |
5282 STATS LOCAL MSV -8.0813 0.72030 | |
5283 STATS LOCAL VITERBI -7.7552 0.72030 | |
5284 STATS LOCAL FORWARD -3.4416 0.72030 | |
5285 HMM A C G T | |
5286 m->m m->i m->d i->m i->i d->m d->d | |
5287 COMPO 1.55466 1.04845 1.61897 1.42646 | |
5288 1.38629 1.38629 1.38629 1.38629 | |
5289 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
5290 1 0.15719 3.27118 2.73043 3.16274 1 - - | |
5291 1.38629 1.38629 1.38629 1.38629 | |
5292 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5293 2 3.30705 0.14631 3.36166 2.73626 2 - - | |
5294 1.38629 1.38629 1.38629 1.38629 | |
5295 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5296 3 0.15719 3.27118 2.73043 3.16274 3 - - | |
5297 1.38629 1.38629 1.38629 1.38629 | |
5298 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5299 4 3.30705 0.14631 3.36166 2.73626 4 - - | |
5300 1.38629 1.38629 1.38629 1.38629 | |
5301 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5302 5 0.15719 3.27118 2.73043 3.16274 5 - - | |
5303 1.38629 1.38629 1.38629 1.38629 | |
5304 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5305 6 3.30705 0.14631 3.36166 2.73626 6 - - | |
5306 1.38629 1.38629 1.38629 1.38629 | |
5307 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5308 7 3.30705 0.14631 3.36166 2.73626 7 - - | |
5309 1.38629 1.38629 1.38629 1.38629 | |
5310 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5311 8 0.15719 3.27118 2.73043 3.16274 8 - - | |
5312 1.38629 1.38629 1.38629 1.38629 | |
5313 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5314 9 3.30705 0.14631 3.36166 2.73626 9 - - | |
5315 1.38629 1.38629 1.38629 1.38629 | |
5316 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5317 10 3.30705 0.14631 3.36166 2.73626 10 - - | |
5318 1.38629 1.38629 1.38629 1.38629 | |
5319 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5320 11 2.97980 2.52563 3.03204 0.19727 11 - - | |
5321 1.38629 1.38629 1.38629 1.38629 | |
5322 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5323 12 3.30705 0.14631 3.36166 2.73626 12 - - | |
5324 1.38629 1.38629 1.38629 1.38629 | |
5325 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5326 13 2.97980 2.52563 3.03204 0.19727 13 - - | |
5327 1.38629 1.38629 1.38629 1.38629 | |
5328 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5329 14 2.86982 3.47591 0.13017 3.36931 14 - - | |
5330 1.38629 1.38629 1.38629 1.38629 | |
5331 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5332 15 3.30705 0.14631 3.36166 2.73626 15 - - | |
5333 1.38629 1.38629 1.38629 1.38629 | |
5334 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5335 16 2.97980 2.52563 3.03204 0.19727 16 - - | |
5336 1.38629 1.38629 1.38629 1.38629 | |
5337 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5338 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
5339 1.38629 1.38629 1.38629 1.38629 | |
5340 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5341 18 2.86982 3.47591 0.13017 3.36931 18 - - | |
5342 1.38629 1.38629 1.38629 1.38629 | |
5343 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5344 19 3.30705 0.14631 3.36166 2.73626 19 - - | |
5345 1.38629 1.38629 1.38629 1.38629 | |
5346 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5347 20 0.15719 3.27118 2.73043 3.16274 20 - - | |
5348 1.38629 1.38629 1.38629 1.38629 | |
5349 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5350 21 3.30705 0.14631 3.36166 2.73626 21 - - | |
5351 1.38629 1.38629 1.38629 1.38629 | |
5352 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5353 22 2.86982 3.47591 0.13017 3.36931 22 - - | |
5354 1.38629 1.38629 1.38629 1.38629 | |
5355 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5356 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
5357 1.38629 1.38629 1.38629 1.38629 | |
5358 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5359 24 2.86982 3.47591 0.13017 3.36931 24 - - | |
5360 1.38629 1.38629 1.38629 1.38629 | |
5361 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5362 25 2.86982 3.47591 0.13017 3.36931 25 - - | |
5363 1.38629 1.38629 1.38629 1.38629 | |
5364 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5365 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
5366 1.38629 1.38629 1.38629 1.38629 | |
5367 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5368 27 0.15719 3.27118 2.73043 3.16274 27 - - | |
5369 1.38629 1.38629 1.38629 1.38629 | |
5370 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5371 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
5372 1.38629 1.38629 1.38629 1.38629 | |
5373 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5374 29 2.97980 2.52563 3.03204 0.19727 29 - - | |
5375 1.38629 1.38629 1.38629 1.38629 | |
5376 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5377 30 3.30705 0.14631 3.36166 2.73626 30 - - | |
5378 1.38629 1.38629 1.38629 1.38629 | |
5379 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5380 31 3.30705 0.14631 3.36166 2.73626 31 - - | |
5381 1.38629 1.38629 1.38629 1.38629 | |
5382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5383 32 3.30705 0.14631 3.36166 2.73626 32 - - | |
5384 1.38629 1.38629 1.38629 1.38629 | |
5385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5386 33 0.15719 3.27118 2.73043 3.16274 33 - - | |
5387 1.38629 1.38629 1.38629 1.38629 | |
5388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5389 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
5390 1.38629 1.38629 1.38629 1.38629 | |
5391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5392 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
5393 1.38629 1.38629 1.38629 1.38629 | |
5394 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5395 36 2.97980 2.52563 3.03204 0.19727 36 - - | |
5396 1.38629 1.38629 1.38629 1.38629 | |
5397 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5398 37 3.30705 0.14631 3.36166 2.73626 37 - - | |
5399 1.38629 1.38629 1.38629 1.38629 | |
5400 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5401 38 0.15719 3.27118 2.73043 3.16274 38 - - | |
5402 1.38629 1.38629 1.38629 1.38629 | |
5403 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5404 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
5405 1.38629 1.38629 1.38629 1.38629 | |
5406 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5407 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
5408 1.38629 1.38629 1.38629 1.38629 | |
5409 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5410 41 2.86982 3.47591 0.13017 3.36931 41 - - | |
5411 1.38629 1.38629 1.38629 1.38629 | |
5412 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5413 42 0.15719 3.27118 2.73043 3.16274 42 - - | |
5414 1.38629 1.38629 1.38629 1.38629 | |
5415 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5416 43 2.86982 3.47591 0.13017 3.36931 43 - - | |
5417 1.38629 1.38629 1.38629 1.38629 | |
5418 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5419 44 2.97980 2.52563 3.03204 0.19727 44 - - | |
5420 1.38629 1.38629 1.38629 1.38629 | |
5421 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5422 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
5423 1.38629 1.38629 1.38629 1.38629 | |
5424 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
5425 // | |
5426 HMMER3/b [3.0 | March 2010] | |
5427 NAME 3_End_Alveolata_58S_end_thirteenc_long | |
5428 LENG 45 | |
5429 ALPH DNA | |
5430 RF no | |
5431 CS no | |
5432 MAP yes | |
5433 DATE Wed Feb 29 22:54:02 2012 | |
5434 NSEQ 6 | |
5435 EFFN 3.676758 | |
5436 CKSUM 138006768 | |
5437 STATS LOCAL MSV -7.7146 0.71932 | |
5438 STATS LOCAL VITERBI -7.6336 0.71932 | |
5439 STATS LOCAL FORWARD -4.1384 0.71932 | |
5440 HMM A C G T | |
5441 m->m m->i m->d i->m i->i d->m d->d | |
5442 COMPO 1.56284 1.02897 1.71089 1.37681 | |
5443 1.38629 1.38629 1.38629 1.38629 | |
5444 0.03462 4.07359 4.07359 1.46634 0.26236 0.00000 * | |
5445 1 0.12855 3.48721 2.87098 3.39919 1 - - | |
5446 1.38629 1.38629 1.38629 1.38629 | |
5447 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5448 2 3.55586 0.11648 3.59995 2.91754 2 - - | |
5449 1.38629 1.38629 1.38629 1.38629 | |
5450 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5451 3 0.12855 3.48721 2.87098 3.39919 3 - - | |
5452 1.38629 1.38629 1.38629 1.38629 | |
5453 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5454 4 3.55586 0.11648 3.59995 2.91754 4 - - | |
5455 1.38629 1.38629 1.38629 1.38629 | |
5456 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5457 5 0.12855 3.48721 2.87098 3.39919 5 - - | |
5458 1.38629 1.38629 1.38629 1.38629 | |
5459 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5460 6 3.55586 0.11648 3.59995 2.91754 6 - - | |
5461 1.38629 1.38629 1.38629 1.38629 | |
5462 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5463 7 3.19790 2.66450 3.24182 0.16202 7 - - | |
5464 1.38629 1.38629 1.38629 1.38629 | |
5465 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5466 8 3.02074 3.69511 0.10606 3.61119 8 - - | |
5467 1.38629 1.38629 1.38629 1.38629 | |
5468 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5469 9 3.55586 0.11648 3.59995 2.91754 9 - - | |
5470 1.38629 1.38629 1.38629 1.38629 | |
5471 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5472 10 3.55586 0.11648 3.59995 2.91754 10 - - | |
5473 1.38629 1.38629 1.38629 1.38629 | |
5474 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5475 11 3.19790 2.66450 3.24182 0.16202 11 - - | |
5476 1.38629 1.38629 1.38629 1.38629 | |
5477 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5478 12 3.55586 0.11648 3.59995 2.91754 12 - - | |
5479 1.38629 1.38629 1.38629 1.38629 | |
5480 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5481 13 3.19790 2.66450 3.24182 0.16202 13 - - | |
5482 1.38629 1.38629 1.38629 1.38629 | |
5483 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5484 14 3.02074 3.69511 0.10606 3.61119 14 - - | |
5485 1.38629 1.38629 1.38629 1.38629 | |
5486 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5487 15 3.19790 2.66450 3.24182 0.16202 15 - - | |
5488 1.38629 1.38629 1.38629 1.38629 | |
5489 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5490 16 3.19790 2.66450 3.24182 0.16202 16 - - | |
5491 1.38629 1.38629 1.38629 1.38629 | |
5492 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5493 17 3.19790 2.66450 3.24182 0.16202 17 - - | |
5494 1.38629 1.38629 1.38629 1.38629 | |
5495 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5496 18 0.94052 1.00771 2.17954 2.02929 18 - - | |
5497 1.38629 1.38629 1.38629 1.38629 | |
5498 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5499 19 3.55586 0.11648 3.59995 2.91754 19 - - | |
5500 1.38629 1.38629 1.38629 1.38629 | |
5501 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5502 20 0.12855 3.48721 2.87098 3.39919 20 - - | |
5503 1.38629 1.38629 1.38629 1.38629 | |
5504 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5505 21 0.66712 2.29396 2.24218 1.27396 21 - - | |
5506 1.38629 1.38629 1.38629 1.38629 | |
5507 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5508 22 3.02074 3.69511 0.10606 3.61119 22 - - | |
5509 1.38629 1.38629 1.38629 1.38629 | |
5510 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5511 23 3.55586 0.11648 3.59995 2.91754 23 - - | |
5512 1.38629 1.38629 1.38629 1.38629 | |
5513 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5514 24 0.12855 3.48721 2.87098 3.39919 24 - - | |
5515 1.38629 1.38629 1.38629 1.38629 | |
5516 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5517 25 3.02074 3.69511 0.10606 3.61119 25 - - | |
5518 1.38629 1.38629 1.38629 1.38629 | |
5519 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5520 26 3.19790 2.66450 3.24182 0.16202 26 - - | |
5521 1.38629 1.38629 1.38629 1.38629 | |
5522 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5523 27 3.02074 3.69511 0.10606 3.61119 27 - - | |
5524 1.38629 1.38629 1.38629 1.38629 | |
5525 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5526 28 3.55586 0.11648 3.59995 2.91754 28 - - | |
5527 1.38629 1.38629 1.38629 1.38629 | |
5528 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5529 29 0.12855 3.48721 2.87098 3.39919 29 - - | |
5530 1.38629 1.38629 1.38629 1.38629 | |
5531 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5532 30 3.55586 0.11648 3.59995 2.91754 30 - - | |
5533 1.38629 1.38629 1.38629 1.38629 | |
5534 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5535 31 3.55586 0.11648 3.59995 2.91754 31 - - | |
5536 1.38629 1.38629 1.38629 1.38629 | |
5537 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5538 32 3.55586 0.11648 3.59995 2.91754 32 - - | |
5539 1.38629 1.38629 1.38629 1.38629 | |
5540 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5541 33 0.12855 3.48721 2.87098 3.39919 33 - - | |
5542 1.38629 1.38629 1.38629 1.38629 | |
5543 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5544 34 3.19790 2.66450 3.24182 0.16202 34 - - | |
5545 1.38629 1.38629 1.38629 1.38629 | |
5546 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5547 35 3.19790 2.66450 3.24182 0.16202 35 - - | |
5548 1.38629 1.38629 1.38629 1.38629 | |
5549 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5550 36 3.19790 2.66450 3.24182 0.16202 36 - - | |
5551 1.38629 1.38629 1.38629 1.38629 | |
5552 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5553 37 3.55586 0.11648 3.59995 2.91754 37 - - | |
5554 1.38629 1.38629 1.38629 1.38629 | |
5555 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5556 38 0.12855 3.48721 2.87098 3.39919 38 - - | |
5557 1.38629 1.38629 1.38629 1.38629 | |
5558 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5559 39 3.02074 3.69511 0.10606 3.61119 39 - - | |
5560 1.38629 1.38629 1.38629 1.38629 | |
5561 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5562 40 3.55586 0.11648 3.59995 2.91754 40 - - | |
5563 1.38629 1.38629 1.38629 1.38629 | |
5564 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5565 41 3.02074 3.69511 0.10606 3.61119 41 - - | |
5566 1.38629 1.38629 1.38629 1.38629 | |
5567 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5568 42 3.55586 0.11648 3.59995 2.91754 42 - - | |
5569 1.38629 1.38629 1.38629 1.38629 | |
5570 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5571 43 3.55586 0.11648 3.59995 2.91754 43 - - | |
5572 1.38629 1.38629 1.38629 1.38629 | |
5573 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5574 44 3.19790 2.66450 3.24182 0.16202 44 - - | |
5575 1.38629 1.38629 1.38629 1.38629 | |
5576 0.03462 4.07359 4.07359 1.46634 0.26236 1.09861 0.40547 | |
5577 45 2.56017 0.58808 2.63122 1.21967 45 - - | |
5578 1.38629 1.38629 1.38629 1.38629 | |
5579 0.01746 4.05643 * 1.46634 0.26236 0.00000 * | |
5580 // | |
5581 HMMER3/b [3.0 | March 2010] | |
5582 NAME 3_End_Alveolata_58S_end_threea_long | |
5583 LENG 45 | |
5584 ALPH DNA | |
5585 RF no | |
5586 CS no | |
5587 MAP yes | |
5588 DATE Wed Feb 29 22:46:58 2012 | |
5589 NSEQ 2 | |
5590 EFFN 2.000000 | |
5591 CKSUM 1268247449 | |
5592 STATS LOCAL MSV -7.3625 0.72824 | |
5593 STATS LOCAL VITERBI -8.2348 0.72824 | |
5594 STATS LOCAL FORWARD -3.6133 0.72824 | |
5595 HMM A C G T | |
5596 m->m m->i m->d i->m i->i d->m d->d | |
5597 COMPO 1.66059 1.44581 1.26603 1.22940 | |
5598 1.38629 1.38629 1.38629 1.38629 | |
5599 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
5600 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
5601 1.38629 1.38629 1.38629 1.38629 | |
5602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5603 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
5604 1.38629 1.38629 1.38629 1.38629 | |
5605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5606 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
5607 1.38629 1.38629 1.38629 1.38629 | |
5608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5609 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
5610 1.38629 1.38629 1.38629 1.38629 | |
5611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5612 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
5613 1.38629 1.38629 1.38629 1.38629 | |
5614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5615 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
5616 1.38629 1.38629 1.38629 1.38629 | |
5617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5618 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
5619 1.38629 1.38629 1.38629 1.38629 | |
5620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5621 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
5622 1.38629 1.38629 1.38629 1.38629 | |
5623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5624 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
5625 1.38629 1.38629 1.38629 1.38629 | |
5626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5627 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
5628 1.38629 1.38629 1.38629 1.38629 | |
5629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5630 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
5631 1.38629 1.38629 1.38629 1.38629 | |
5632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5633 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
5634 1.38629 1.38629 1.38629 1.38629 | |
5635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5636 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
5637 1.38629 1.38629 1.38629 1.38629 | |
5638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5639 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
5640 1.38629 1.38629 1.38629 1.38629 | |
5641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5642 15 0.23862 2.84929 2.43386 2.70756 15 - - | |
5643 1.38629 1.38629 1.38629 1.38629 | |
5644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5645 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
5646 1.38629 1.38629 1.38629 1.38629 | |
5647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5648 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
5649 1.38629 1.38629 1.38629 1.38629 | |
5650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5651 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
5652 1.38629 1.38629 1.38629 1.38629 | |
5653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5654 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
5655 1.38629 1.38629 1.38629 1.38629 | |
5656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5657 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
5658 1.38629 1.38629 1.38629 1.38629 | |
5659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5660 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
5661 1.38629 1.38629 1.38629 1.38629 | |
5662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5663 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
5664 1.38629 1.38629 1.38629 1.38629 | |
5665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5666 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
5667 1.38629 1.38629 1.38629 1.38629 | |
5668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5669 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
5670 1.38629 1.38629 1.38629 1.38629 | |
5671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5672 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
5673 1.38629 1.38629 1.38629 1.38629 | |
5674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5675 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
5676 1.38629 1.38629 1.38629 1.38629 | |
5677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5678 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
5679 1.38629 1.38629 1.38629 1.38629 | |
5680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5681 28 2.57915 2.25909 2.64442 0.28946 28 - - | |
5682 1.38629 1.38629 1.38629 1.38629 | |
5683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5684 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
5685 1.38629 1.38629 1.38629 1.38629 | |
5686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5687 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
5688 1.38629 1.38629 1.38629 1.38629 | |
5689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5690 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
5691 1.38629 1.38629 1.38629 1.38629 | |
5692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5693 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
5694 1.38629 1.38629 1.38629 1.38629 | |
5695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5696 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
5697 1.38629 1.38629 1.38629 1.38629 | |
5698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5699 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
5700 1.38629 1.38629 1.38629 1.38629 | |
5701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5702 35 2.57915 2.25909 2.64442 0.28946 35 - - | |
5703 1.38629 1.38629 1.38629 1.38629 | |
5704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5705 36 2.53331 3.02441 0.20344 2.88069 36 - - | |
5706 1.38629 1.38629 1.38629 1.38629 | |
5707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5708 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
5709 1.38629 1.38629 1.38629 1.38629 | |
5710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5711 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
5712 1.38629 1.38629 1.38629 1.38629 | |
5713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5714 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
5715 1.38629 1.38629 1.38629 1.38629 | |
5716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5717 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
5718 1.38629 1.38629 1.38629 1.38629 | |
5719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5720 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
5721 1.38629 1.38629 1.38629 1.38629 | |
5722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5723 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
5724 1.38629 1.38629 1.38629 1.38629 | |
5725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5726 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
5727 1.38629 1.38629 1.38629 1.38629 | |
5728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5729 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
5730 1.38629 1.38629 1.38629 1.38629 | |
5731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
5732 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
5733 1.38629 1.38629 1.38629 1.38629 | |
5734 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
5735 // | |
5736 HMMER3/b [3.0 | March 2010] | |
5737 NAME 3_End_Alveolata_58S_end_threeb_long | |
5738 LENG 45 | |
5739 ALPH DNA | |
5740 RF no | |
5741 CS no | |
5742 MAP yes | |
5743 DATE Wed Feb 29 22:47:05 2012 | |
5744 NSEQ 3 | |
5745 EFFN 3.000000 | |
5746 CKSUM 3892526639 | |
5747 STATS LOCAL MSV -7.9454 0.72246 | |
5748 STATS LOCAL VITERBI -7.9639 0.72246 | |
5749 STATS LOCAL FORWARD -4.0448 0.72246 | |
5750 HMM A C G T | |
5751 m->m m->i m->d i->m i->i d->m d->d | |
5752 COMPO 1.78275 1.43417 1.30656 1.13083 | |
5753 1.38629 1.38629 1.38629 1.38629 | |
5754 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
5755 1 2.97980 2.52563 3.03204 0.19727 1 - - | |
5756 1.38629 1.38629 1.38629 1.38629 | |
5757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5758 2 2.86982 3.47591 0.13017 3.36931 2 - - | |
5759 1.38629 1.38629 1.38629 1.38629 | |
5760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5761 3 3.30705 0.14631 3.36166 2.73626 3 - - | |
5762 1.38629 1.38629 1.38629 1.38629 | |
5763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5764 4 2.97980 2.52563 3.03204 0.19727 4 - - | |
5765 1.38629 1.38629 1.38629 1.38629 | |
5766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5767 5 2.10551 2.22611 0.68843 1.31713 5 - - | |
5768 1.38629 1.38629 1.38629 1.38629 | |
5769 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5770 6 2.97980 2.52563 3.03204 0.19727 6 - - | |
5771 1.38629 1.38629 1.38629 1.38629 | |
5772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5773 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
5774 1.38629 1.38629 1.38629 1.38629 | |
5775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5776 8 2.86982 3.47591 0.13017 3.36931 8 - - | |
5777 1.38629 1.38629 1.38629 1.38629 | |
5778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5779 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
5780 1.38629 1.38629 1.38629 1.38629 | |
5781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5782 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
5783 1.38629 1.38629 1.38629 1.38629 | |
5784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5785 11 0.15719 3.27118 2.73043 3.16274 11 - - | |
5786 1.38629 1.38629 1.38629 1.38629 | |
5787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5788 12 2.97980 2.52563 3.03204 0.19727 12 - - | |
5789 1.38629 1.38629 1.38629 1.38629 | |
5790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5791 13 0.15719 3.27118 2.73043 3.16274 13 - - | |
5792 1.38629 1.38629 1.38629 1.38629 | |
5793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5794 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
5795 1.38629 1.38629 1.38629 1.38629 | |
5796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5797 15 0.15719 3.27118 2.73043 3.16274 15 - - | |
5798 1.38629 1.38629 1.38629 1.38629 | |
5799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5800 16 3.30705 0.14631 3.36166 2.73626 16 - - | |
5801 1.38629 1.38629 1.38629 1.38629 | |
5802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5803 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
5804 1.38629 1.38629 1.38629 1.38629 | |
5805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5806 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
5807 1.38629 1.38629 1.38629 1.38629 | |
5808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5809 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
5810 1.38629 1.38629 1.38629 1.38629 | |
5811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5812 20 0.15719 3.27118 2.73043 3.16274 20 - - | |
5813 1.38629 1.38629 1.38629 1.38629 | |
5814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5815 21 3.30705 0.14631 3.36166 2.73626 21 - - | |
5816 1.38629 1.38629 1.38629 1.38629 | |
5817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5818 22 0.15719 3.27118 2.73043 3.16274 22 - - | |
5819 1.38629 1.38629 1.38629 1.38629 | |
5820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5821 23 2.86982 3.47591 0.13017 3.36931 23 - - | |
5822 1.38629 1.38629 1.38629 1.38629 | |
5823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5824 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
5825 1.38629 1.38629 1.38629 1.38629 | |
5826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5827 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
5828 1.38629 1.38629 1.38629 1.38629 | |
5829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5830 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
5831 1.38629 1.38629 1.38629 1.38629 | |
5832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5833 27 2.86982 3.47591 0.13017 3.36931 27 - - | |
5834 1.38629 1.38629 1.38629 1.38629 | |
5835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5836 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
5837 1.38629 1.38629 1.38629 1.38629 | |
5838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5839 29 3.30705 0.14631 3.36166 2.73626 29 - - | |
5840 1.38629 1.38629 1.38629 1.38629 | |
5841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5842 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
5843 1.38629 1.38629 1.38629 1.38629 | |
5844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5845 31 2.86982 3.47591 0.13017 3.36931 31 - - | |
5846 1.38629 1.38629 1.38629 1.38629 | |
5847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5848 32 2.09516 1.42731 0.67263 2.06647 32 - - | |
5849 1.38629 1.38629 1.38629 1.38629 | |
5850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5851 33 2.97980 2.52563 3.03204 0.19727 33 - - | |
5852 1.38629 1.38629 1.38629 1.38629 | |
5853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5854 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
5855 1.38629 1.38629 1.38629 1.38629 | |
5856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5857 35 2.97980 2.52563 3.03204 0.19727 35 - - | |
5858 1.38629 1.38629 1.38629 1.38629 | |
5859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5860 36 2.86982 3.47591 0.13017 3.36931 36 - - | |
5861 1.38629 1.38629 1.38629 1.38629 | |
5862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5863 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
5864 1.38629 1.38629 1.38629 1.38629 | |
5865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5866 38 2.42587 0.63365 2.49879 1.20810 38 - - | |
5867 1.38629 1.38629 1.38629 1.38629 | |
5868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5869 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
5870 1.38629 1.38629 1.38629 1.38629 | |
5871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5872 40 2.42586 1.33558 2.49582 0.56887 40 - - | |
5873 1.38629 1.38629 1.38629 1.38629 | |
5874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5875 41 3.30705 0.14631 3.36166 2.73626 41 - - | |
5876 1.38629 1.38629 1.38629 1.38629 | |
5877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5878 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
5879 1.38629 1.38629 1.38629 1.38629 | |
5880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5881 43 2.97980 2.52563 3.03204 0.19727 43 - - | |
5882 1.38629 1.38629 1.38629 1.38629 | |
5883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5884 44 3.30705 0.14631 3.36166 2.73626 44 - - | |
5885 1.38629 1.38629 1.38629 1.38629 | |
5886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5887 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
5888 1.38629 1.38629 1.38629 1.38629 | |
5889 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
5890 // | |
5891 HMMER3/b [3.0 | March 2010] | |
5892 NAME 3_End_Alveolata_58S_end_threec_long | |
5893 LENG 45 | |
5894 ALPH DNA | |
5895 RF no | |
5896 CS no | |
5897 MAP yes | |
5898 DATE Wed Feb 29 22:47:11 2012 | |
5899 NSEQ 3 | |
5900 EFFN 3.000000 | |
5901 CKSUM 4079785563 | |
5902 STATS LOCAL MSV -8.0314 0.72082 | |
5903 STATS LOCAL VITERBI -7.8511 0.72082 | |
5904 STATS LOCAL FORWARD -3.9522 0.72082 | |
5905 HMM A C G T | |
5906 m->m m->i m->d i->m i->i d->m d->d | |
5907 COMPO 1.62542 1.59063 1.38012 1.05605 | |
5908 1.38629 1.38629 1.38629 1.38629 | |
5909 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
5910 1 2.97980 2.52563 3.03204 0.19727 1 - - | |
5911 1.38629 1.38629 1.38629 1.38629 | |
5912 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5913 2 2.86982 3.47591 0.13017 3.36931 2 - - | |
5914 1.38629 1.38629 1.38629 1.38629 | |
5915 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5916 3 3.30705 0.14631 3.36166 2.73626 3 - - | |
5917 1.38629 1.38629 1.38629 1.38629 | |
5918 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5919 4 2.97980 2.52563 3.03204 0.19727 4 - - | |
5920 1.38629 1.38629 1.38629 1.38629 | |
5921 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5922 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
5923 1.38629 1.38629 1.38629 1.38629 | |
5924 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5925 6 2.97980 2.52563 3.03204 0.19727 6 - - | |
5926 1.38629 1.38629 1.38629 1.38629 | |
5927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5928 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
5929 1.38629 1.38629 1.38629 1.38629 | |
5930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5931 8 2.86982 3.47591 0.13017 3.36931 8 - - | |
5932 1.38629 1.38629 1.38629 1.38629 | |
5933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5934 9 2.86982 3.47591 0.13017 3.36931 9 - - | |
5935 1.38629 1.38629 1.38629 1.38629 | |
5936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5937 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
5938 1.38629 1.38629 1.38629 1.38629 | |
5939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5940 11 0.15719 3.27118 2.73043 3.16274 11 - - | |
5941 1.38629 1.38629 1.38629 1.38629 | |
5942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5943 12 2.97980 2.52563 3.03204 0.19727 12 - - | |
5944 1.38629 1.38629 1.38629 1.38629 | |
5945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5946 13 0.15719 3.27118 2.73043 3.16274 13 - - | |
5947 1.38629 1.38629 1.38629 1.38629 | |
5948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5949 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
5950 1.38629 1.38629 1.38629 1.38629 | |
5951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5952 15 0.15719 3.27118 2.73043 3.16274 15 - - | |
5953 1.38629 1.38629 1.38629 1.38629 | |
5954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5955 16 3.30705 0.14631 3.36166 2.73626 16 - - | |
5956 1.38629 1.38629 1.38629 1.38629 | |
5957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5958 17 3.30705 0.14631 3.36166 2.73626 17 - - | |
5959 1.38629 1.38629 1.38629 1.38629 | |
5960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5961 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
5962 1.38629 1.38629 1.38629 1.38629 | |
5963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5964 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
5965 1.38629 1.38629 1.38629 1.38629 | |
5966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5967 20 0.15719 3.27118 2.73043 3.16274 20 - - | |
5968 1.38629 1.38629 1.38629 1.38629 | |
5969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5970 21 0.15719 3.27118 2.73043 3.16274 21 - - | |
5971 1.38629 1.38629 1.38629 1.38629 | |
5972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5973 22 0.15719 3.27118 2.73043 3.16274 22 - - | |
5974 1.38629 1.38629 1.38629 1.38629 | |
5975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5976 23 2.86982 3.47591 0.13017 3.36931 23 - - | |
5977 1.38629 1.38629 1.38629 1.38629 | |
5978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5979 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
5980 1.38629 1.38629 1.38629 1.38629 | |
5981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5982 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
5983 1.38629 1.38629 1.38629 1.38629 | |
5984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5985 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
5986 1.38629 1.38629 1.38629 1.38629 | |
5987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5988 27 2.86982 3.47591 0.13017 3.36931 27 - - | |
5989 1.38629 1.38629 1.38629 1.38629 | |
5990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5991 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
5992 1.38629 1.38629 1.38629 1.38629 | |
5993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5994 29 3.30705 0.14631 3.36166 2.73626 29 - - | |
5995 1.38629 1.38629 1.38629 1.38629 | |
5996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
5997 30 2.97980 2.52563 3.03204 0.19727 30 - - | |
5998 1.38629 1.38629 1.38629 1.38629 | |
5999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6000 31 2.86982 3.47591 0.13017 3.36931 31 - - | |
6001 1.38629 1.38629 1.38629 1.38629 | |
6002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6003 32 3.30705 0.14631 3.36166 2.73626 32 - - | |
6004 1.38629 1.38629 1.38629 1.38629 | |
6005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6006 33 2.97980 2.52563 3.03204 0.19727 33 - - | |
6007 1.38629 1.38629 1.38629 1.38629 | |
6008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6009 34 2.97980 2.52563 3.03204 0.19727 34 - - | |
6010 1.38629 1.38629 1.38629 1.38629 | |
6011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6012 35 2.97980 2.52563 3.03204 0.19727 35 - - | |
6013 1.38629 1.38629 1.38629 1.38629 | |
6014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6015 36 2.86982 3.47591 0.13017 3.36931 36 - - | |
6016 1.38629 1.38629 1.38629 1.38629 | |
6017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6018 37 2.86982 3.47591 0.13017 3.36931 37 - - | |
6019 1.38629 1.38629 1.38629 1.38629 | |
6020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6021 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
6022 1.38629 1.38629 1.38629 1.38629 | |
6023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6024 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
6025 1.38629 1.38629 1.38629 1.38629 | |
6026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6027 40 2.97980 2.52563 3.03204 0.19727 40 - - | |
6028 1.38629 1.38629 1.38629 1.38629 | |
6029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6030 41 3.30705 0.14631 3.36166 2.73626 41 - - | |
6031 1.38629 1.38629 1.38629 1.38629 | |
6032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6033 42 2.97980 2.52563 3.03204 0.19727 42 - - | |
6034 1.38629 1.38629 1.38629 1.38629 | |
6035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6036 43 0.15719 3.27118 2.73043 3.16274 43 - - | |
6037 1.38629 1.38629 1.38629 1.38629 | |
6038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6039 44 2.97980 2.52563 3.03204 0.19727 44 - - | |
6040 1.38629 1.38629 1.38629 1.38629 | |
6041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
6042 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
6043 1.38629 1.38629 1.38629 1.38629 | |
6044 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
6045 // | |
6046 HMMER3/b [3.0 | March 2010] | |
6047 NAME 3_End_Alveolata_58S_end_threed_long | |
6048 LENG 45 | |
6049 ALPH DNA | |
6050 RF no | |
6051 CS no | |
6052 MAP yes | |
6053 DATE Wed Feb 29 22:47:17 2012 | |
6054 NSEQ 2 | |
6055 EFFN 2.000000 | |
6056 CKSUM 3952366831 | |
6057 STATS LOCAL MSV -7.3931 0.72871 | |
6058 STATS LOCAL VITERBI -8.1902 0.72871 | |
6059 STATS LOCAL FORWARD -3.4651 0.72871 | |
6060 HMM A C G T | |
6061 m->m m->i m->d i->m i->i d->m d->d | |
6062 COMPO 1.70464 1.38559 1.24625 1.27151 | |
6063 1.38629 1.38629 1.38629 1.38629 | |
6064 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
6065 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
6066 1.38629 1.38629 1.38629 1.38629 | |
6067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6068 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
6069 1.38629 1.38629 1.38629 1.38629 | |
6070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6071 3 2.81865 0.23582 2.88868 2.35662 3 - - | |
6072 1.38629 1.38629 1.38629 1.38629 | |
6073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6074 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
6075 1.38629 1.38629 1.38629 1.38629 | |
6076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6077 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
6078 1.38629 1.38629 1.38629 1.38629 | |
6079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6080 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
6081 1.38629 1.38629 1.38629 1.38629 | |
6082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6083 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
6084 1.38629 1.38629 1.38629 1.38629 | |
6085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6086 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
6087 1.38629 1.38629 1.38629 1.38629 | |
6088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6089 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
6090 1.38629 1.38629 1.38629 1.38629 | |
6091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6092 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
6093 1.38629 1.38629 1.38629 1.38629 | |
6094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6095 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
6096 1.38629 1.38629 1.38629 1.38629 | |
6097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6098 12 2.57915 2.25909 2.64442 0.28946 12 - - | |
6099 1.38629 1.38629 1.38629 1.38629 | |
6100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6101 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
6102 1.38629 1.38629 1.38629 1.38629 | |
6103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6104 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
6105 1.38629 1.38629 1.38629 1.38629 | |
6106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6107 15 0.23862 2.84929 2.43386 2.70756 15 - - | |
6108 1.38629 1.38629 1.38629 1.38629 | |
6109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6110 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
6111 1.38629 1.38629 1.38629 1.38629 | |
6112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6113 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
6114 1.38629 1.38629 1.38629 1.38629 | |
6115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6116 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
6117 1.38629 1.38629 1.38629 1.38629 | |
6118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6119 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
6120 1.38629 1.38629 1.38629 1.38629 | |
6121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6122 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
6123 1.38629 1.38629 1.38629 1.38629 | |
6124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6125 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
6126 1.38629 1.38629 1.38629 1.38629 | |
6127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6128 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
6129 1.38629 1.38629 1.38629 1.38629 | |
6130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6131 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
6132 1.38629 1.38629 1.38629 1.38629 | |
6133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6134 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
6135 1.38629 1.38629 1.38629 1.38629 | |
6136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6137 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
6138 1.38629 1.38629 1.38629 1.38629 | |
6139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6140 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
6141 1.38629 1.38629 1.38629 1.38629 | |
6142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6143 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
6144 1.38629 1.38629 1.38629 1.38629 | |
6145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6146 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
6147 1.38629 1.38629 1.38629 1.38629 | |
6148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6149 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
6150 1.38629 1.38629 1.38629 1.38629 | |
6151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6152 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
6153 1.38629 1.38629 1.38629 1.38629 | |
6154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6155 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
6156 1.38629 1.38629 1.38629 1.38629 | |
6157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6158 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
6159 1.38629 1.38629 1.38629 1.38629 | |
6160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6161 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
6162 1.38629 1.38629 1.38629 1.38629 | |
6163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6164 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
6165 1.38629 1.38629 1.38629 1.38629 | |
6166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6167 35 2.57915 2.25909 2.64442 0.28946 35 - - | |
6168 1.38629 1.38629 1.38629 1.38629 | |
6169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6170 36 2.53331 3.02441 0.20344 2.88069 36 - - | |
6171 1.38629 1.38629 1.38629 1.38629 | |
6172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6173 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
6174 1.38629 1.38629 1.38629 1.38629 | |
6175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6176 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
6177 1.38629 1.38629 1.38629 1.38629 | |
6178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6179 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
6180 1.38629 1.38629 1.38629 1.38629 | |
6181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6182 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
6183 1.38629 1.38629 1.38629 1.38629 | |
6184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6185 41 2.81865 0.23582 2.88868 2.35662 41 - - | |
6186 1.38629 1.38629 1.38629 1.38629 | |
6187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6188 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
6189 1.38629 1.38629 1.38629 1.38629 | |
6190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6191 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
6192 1.38629 1.38629 1.38629 1.38629 | |
6193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6194 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
6195 1.38629 1.38629 1.38629 1.38629 | |
6196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6197 45 0.92825 2.28391 0.95698 2.13014 45 - - | |
6198 1.38629 1.38629 1.38629 1.38629 | |
6199 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
6200 // | |
6201 HMMER3/b [3.0 | March 2010] | |
6202 NAME 3_End_Alveolata_58S_end_twelvea_long | |
6203 LENG 45 | |
6204 ALPH DNA | |
6205 RF no | |
6206 CS no | |
6207 MAP yes | |
6208 DATE Wed Feb 29 22:49:56 2012 | |
6209 NSEQ 6 | |
6210 EFFN 3.606445 | |
6211 CKSUM 1425331606 | |
6212 STATS LOCAL MSV -7.6440 0.71933 | |
6213 STATS LOCAL VITERBI -7.7492 0.71933 | |
6214 STATS LOCAL FORWARD -4.2833 0.71933 | |
6215 HMM A C G T | |
6216 m->m m->i m->d i->m i->i d->m d->d | |
6217 COMPO 1.27087 1.33665 1.80281 1.23151 | |
6218 1.38629 1.38629 1.38629 1.38629 | |
6219 0.03505 4.06155 4.06155 1.46634 0.26236 0.00000 * | |
6220 1 3.17699 2.65124 3.22173 0.16506 1 - - | |
6221 1.38629 1.38629 1.38629 1.38629 | |
6222 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6223 2 3.00708 3.67496 0.10805 3.58886 2 - - | |
6224 1.38629 1.38629 1.38629 1.38629 | |
6225 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6226 3 0.13096 3.46696 2.85796 3.37696 3 - - | |
6227 1.38629 1.38629 1.38629 1.38629 | |
6228 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6229 4 0.13096 3.46696 2.85796 3.37696 4 - - | |
6230 1.38629 1.38629 1.38629 1.38629 | |
6231 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6232 5 3.53270 0.11893 3.57783 2.90095 5 - - | |
6233 1.38629 1.38629 1.38629 1.38629 | |
6234 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6235 6 3.00708 3.67496 0.10805 3.58886 6 - - | |
6236 1.38629 1.38629 1.38629 1.38629 | |
6237 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6238 7 3.17699 2.65124 3.22173 0.16506 7 - - | |
6239 1.38629 1.38629 1.38629 1.38629 | |
6240 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6241 8 0.13096 3.46696 2.85796 3.37696 8 - - | |
6242 1.38629 1.38629 1.38629 1.38629 | |
6243 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6244 9 0.13096 3.46696 2.85796 3.37696 9 - - | |
6245 1.38629 1.38629 1.38629 1.38629 | |
6246 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6247 10 3.53270 0.11893 3.57783 2.90095 10 - - | |
6248 1.38629 1.38629 1.38629 1.38629 | |
6249 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6250 11 3.53270 0.11893 3.57783 2.90095 11 - - | |
6251 1.38629 1.38629 1.38629 1.38629 | |
6252 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6253 12 0.13096 3.46696 2.85796 3.37696 12 - - | |
6254 1.38629 1.38629 1.38629 1.38629 | |
6255 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6256 13 0.13096 3.46696 2.85796 3.37696 13 - - | |
6257 1.38629 1.38629 1.38629 1.38629 | |
6258 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6259 14 3.53270 0.11893 3.57783 2.90095 14 - - | |
6260 1.38629 1.38629 1.38629 1.38629 | |
6261 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6262 15 0.13096 3.46696 2.85796 3.37696 15 - - | |
6263 1.38629 1.38629 1.38629 1.38629 | |
6264 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6265 16 3.53270 0.11893 3.57783 2.90095 16 - - | |
6266 1.38629 1.38629 1.38629 1.38629 | |
6267 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6268 17 0.13096 3.46696 2.85796 3.37696 17 - - | |
6269 1.38629 1.38629 1.38629 1.38629 | |
6270 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6271 18 3.53270 0.11893 3.57783 2.90095 18 - - | |
6272 1.38629 1.38629 1.38629 1.38629 | |
6273 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6274 19 3.17699 2.65124 3.22173 0.16506 19 - - | |
6275 1.38629 1.38629 1.38629 1.38629 | |
6276 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6277 20 2.45695 0.96987 2.52827 0.78664 20 - - | |
6278 1.38629 1.38629 1.38629 1.38629 | |
6279 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6280 21 3.17699 2.65124 3.22173 0.16506 21 - - | |
6281 1.38629 1.38629 1.38629 1.38629 | |
6282 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6283 22 3.17699 2.65124 3.22173 0.16506 22 - - | |
6284 1.38629 1.38629 1.38629 1.38629 | |
6285 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6286 23 3.17699 2.65124 3.22173 0.16506 23 - - | |
6287 1.38629 1.38629 1.38629 1.38629 | |
6288 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6289 24 3.00708 3.67496 0.10805 3.58886 24 - - | |
6290 1.38629 1.38629 1.38629 1.38629 | |
6291 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6292 25 3.17699 2.65124 3.22173 0.16506 25 - - | |
6293 1.38629 1.38629 1.38629 1.38629 | |
6294 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6295 26 0.13096 3.46696 2.85796 3.37696 26 - - | |
6296 1.38629 1.38629 1.38629 1.38629 | |
6297 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6298 27 3.53270 0.11893 3.57783 2.90095 27 - - | |
6299 1.38629 1.38629 1.38629 1.38629 | |
6300 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6301 28 3.00708 3.67496 0.10805 3.58886 28 - - | |
6302 1.38629 1.38629 1.38629 1.38629 | |
6303 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6304 29 3.17699 2.65124 3.22173 0.16506 29 - - | |
6305 1.38629 1.38629 1.38629 1.38629 | |
6306 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6307 30 3.53270 0.11893 3.57783 2.90095 30 - - | |
6308 1.38629 1.38629 1.38629 1.38629 | |
6309 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6310 31 3.53270 0.11893 3.57783 2.90095 31 - - | |
6311 1.38629 1.38629 1.38629 1.38629 | |
6312 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6313 32 0.13096 3.46696 2.85796 3.37696 32 - - | |
6314 1.38629 1.38629 1.38629 1.38629 | |
6315 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6316 33 3.17699 2.65124 3.22173 0.16506 33 - - | |
6317 1.38629 1.38629 1.38629 1.38629 | |
6318 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6319 34 3.53270 0.11893 3.57783 2.90095 34 - - | |
6320 1.38629 1.38629 1.38629 1.38629 | |
6321 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6322 35 3.17699 2.65124 3.22173 0.16506 35 - - | |
6323 1.38629 1.38629 1.38629 1.38629 | |
6324 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6325 36 3.53270 0.11893 3.57783 2.90095 36 - - | |
6326 1.38629 1.38629 1.38629 1.38629 | |
6327 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6328 37 0.13096 3.46696 2.85796 3.37696 37 - - | |
6329 1.38629 1.38629 1.38629 1.38629 | |
6330 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6331 38 3.00708 3.67496 0.10805 3.58886 38 - - | |
6332 1.38629 1.38629 1.38629 1.38629 | |
6333 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6334 39 3.17699 2.65124 3.22173 0.16506 39 - - | |
6335 1.38629 1.38629 1.38629 1.38629 | |
6336 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6337 40 3.00708 3.67496 0.10805 3.58886 40 - - | |
6338 1.38629 1.38629 1.38629 1.38629 | |
6339 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6340 41 0.13096 3.46696 2.85796 3.37696 41 - - | |
6341 1.38629 1.38629 1.38629 1.38629 | |
6342 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6343 42 0.13096 3.46696 2.85796 3.37696 42 - - | |
6344 1.38629 1.38629 1.38629 1.38629 | |
6345 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6346 43 3.17699 2.65124 3.22173 0.16506 43 - - | |
6347 1.38629 1.38629 1.38629 1.38629 | |
6348 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6349 44 2.78284 1.79931 2.84298 0.33621 44 - - | |
6350 1.38629 1.38629 1.38629 1.38629 | |
6351 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 | |
6352 45 2.78284 1.79931 2.84298 0.33621 45 - - | |
6353 1.38629 1.38629 1.38629 1.38629 | |
6354 0.01768 4.04418 * 1.46634 0.26236 0.00000 * | |
6355 // | |
6356 HMMER3/b [3.0 | March 2010] | |
6357 NAME 3_End_Alveolata_58S_end_twelveb_long | |
6358 LENG 45 | |
6359 ALPH DNA | |
6360 RF no | |
6361 CS no | |
6362 MAP yes | |
6363 DATE Wed Feb 29 22:50:00 2012 | |
6364 NSEQ 4 | |
6365 EFFN 3.613281 | |
6366 CKSUM 327718252 | |
6367 STATS LOCAL MSV -7.7152 0.71933 | |
6368 STATS LOCAL VITERBI -7.8787 0.71933 | |
6369 STATS LOCAL FORWARD -4.2409 0.71933 | |
6370 HMM A C G T | |
6371 m->m m->i m->d i->m i->i d->m d->d | |
6372 COMPO 1.22953 1.30344 1.79734 1.30847 | |
6373 1.38629 1.38629 1.38629 1.38629 | |
6374 0.03501 4.06273 4.06273 1.46634 0.26236 0.00000 * | |
6375 1 3.53498 0.11869 3.58001 2.90259 1 - - | |
6376 1.38629 1.38629 1.38629 1.38629 | |
6377 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6378 2 3.17904 2.65254 3.22370 0.16476 2 - - | |
6379 1.38629 1.38629 1.38629 1.38629 | |
6380 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6381 3 3.00842 3.67695 0.10785 3.59106 3 - - | |
6382 1.38629 1.38629 1.38629 1.38629 | |
6383 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6384 4 0.13072 3.46895 2.85924 3.37914 4 - - | |
6385 1.38629 1.38629 1.38629 1.38629 | |
6386 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6387 5 0.13072 3.46895 2.85924 3.37914 5 - - | |
6388 1.38629 1.38629 1.38629 1.38629 | |
6389 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6390 6 3.53498 0.11869 3.58001 2.90259 6 - - | |
6391 1.38629 1.38629 1.38629 1.38629 | |
6392 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6393 7 3.00842 3.67695 0.10785 3.59106 7 - - | |
6394 1.38629 1.38629 1.38629 1.38629 | |
6395 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6396 8 3.17904 2.65254 3.22370 0.16476 8 - - | |
6397 1.38629 1.38629 1.38629 1.38629 | |
6398 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6399 9 0.13072 3.46895 2.85924 3.37914 9 - - | |
6400 1.38629 1.38629 1.38629 1.38629 | |
6401 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6402 10 0.13072 3.46895 2.85924 3.37914 10 - - | |
6403 1.38629 1.38629 1.38629 1.38629 | |
6404 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6405 11 3.53498 0.11869 3.58001 2.90259 11 - - | |
6406 1.38629 1.38629 1.38629 1.38629 | |
6407 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6408 12 3.53498 0.11869 3.58001 2.90259 12 - - | |
6409 1.38629 1.38629 1.38629 1.38629 | |
6410 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6411 13 0.13072 3.46895 2.85924 3.37914 13 - - | |
6412 1.38629 1.38629 1.38629 1.38629 | |
6413 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6414 14 0.13072 3.46895 2.85924 3.37914 14 - - | |
6415 1.38629 1.38629 1.38629 1.38629 | |
6416 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6417 15 3.53498 0.11869 3.58001 2.90259 15 - - | |
6418 1.38629 1.38629 1.38629 1.38629 | |
6419 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6420 16 0.13072 3.46895 2.85924 3.37914 16 - - | |
6421 1.38629 1.38629 1.38629 1.38629 | |
6422 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6423 17 3.53498 0.11869 3.58001 2.90259 17 - - | |
6424 1.38629 1.38629 1.38629 1.38629 | |
6425 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6426 18 0.13072 3.46895 2.85924 3.37914 18 - - | |
6427 1.38629 1.38629 1.38629 1.38629 | |
6428 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6429 19 3.53498 0.11869 3.58001 2.90259 19 - - | |
6430 1.38629 1.38629 1.38629 1.38629 | |
6431 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6432 20 3.17904 2.65254 3.22370 0.16476 20 - - | |
6433 1.38629 1.38629 1.38629 1.38629 | |
6434 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6435 21 0.96412 2.17979 2.19640 0.93035 21 - - | |
6436 1.38629 1.38629 1.38629 1.38629 | |
6437 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6438 22 0.96412 2.17979 2.19640 0.93035 22 - - | |
6439 1.38629 1.38629 1.38629 1.38629 | |
6440 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6441 23 3.17904 2.65254 3.22370 0.16476 23 - - | |
6442 1.38629 1.38629 1.38629 1.38629 | |
6443 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6444 24 3.00842 3.67695 0.10785 3.59106 24 - - | |
6445 1.38629 1.38629 1.38629 1.38629 | |
6446 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6447 25 3.17904 2.65254 3.22370 0.16476 25 - - | |
6448 1.38629 1.38629 1.38629 1.38629 | |
6449 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6450 26 0.13072 3.46895 2.85924 3.37914 26 - - | |
6451 1.38629 1.38629 1.38629 1.38629 | |
6452 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6453 27 3.53498 0.11869 3.58001 2.90259 27 - - | |
6454 1.38629 1.38629 1.38629 1.38629 | |
6455 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6456 28 3.00842 3.67695 0.10785 3.59106 28 - - | |
6457 1.38629 1.38629 1.38629 1.38629 | |
6458 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6459 29 3.17904 2.65254 3.22370 0.16476 29 - - | |
6460 1.38629 1.38629 1.38629 1.38629 | |
6461 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6462 30 3.53498 0.11869 3.58001 2.90259 30 - - | |
6463 1.38629 1.38629 1.38629 1.38629 | |
6464 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6465 31 3.53498 0.11869 3.58001 2.90259 31 - - | |
6466 1.38629 1.38629 1.38629 1.38629 | |
6467 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6468 32 0.13072 3.46895 2.85924 3.37914 32 - - | |
6469 1.38629 1.38629 1.38629 1.38629 | |
6470 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6471 33 3.17904 2.65254 3.22370 0.16476 33 - - | |
6472 1.38629 1.38629 1.38629 1.38629 | |
6473 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6474 34 3.53498 0.11869 3.58001 2.90259 34 - - | |
6475 1.38629 1.38629 1.38629 1.38629 | |
6476 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6477 35 3.17904 2.65254 3.22370 0.16476 35 - - | |
6478 1.38629 1.38629 1.38629 1.38629 | |
6479 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6480 36 3.53498 0.11869 3.58001 2.90259 36 - - | |
6481 1.38629 1.38629 1.38629 1.38629 | |
6482 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6483 37 0.13072 3.46895 2.85924 3.37914 37 - - | |
6484 1.38629 1.38629 1.38629 1.38629 | |
6485 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6486 38 3.00842 3.67695 0.10785 3.59106 38 - - | |
6487 1.38629 1.38629 1.38629 1.38629 | |
6488 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6489 39 3.17904 2.65254 3.22370 0.16476 39 - - | |
6490 1.38629 1.38629 1.38629 1.38629 | |
6491 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6492 40 3.00842 3.67695 0.10785 3.59106 40 - - | |
6493 1.38629 1.38629 1.38629 1.38629 | |
6494 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6495 41 0.13072 3.46895 2.85924 3.37914 41 - - | |
6496 1.38629 1.38629 1.38629 1.38629 | |
6497 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6498 42 0.13072 3.46895 2.85924 3.37914 42 - - | |
6499 1.38629 1.38629 1.38629 1.38629 | |
6500 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6501 43 3.17904 2.65254 3.22370 0.16476 43 - - | |
6502 1.38629 1.38629 1.38629 1.38629 | |
6503 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6504 44 3.17904 2.65254 3.22370 0.16476 44 - - | |
6505 1.38629 1.38629 1.38629 1.38629 | |
6506 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 | |
6507 45 3.17904 2.65254 3.22370 0.16476 45 - - | |
6508 1.38629 1.38629 1.38629 1.38629 | |
6509 0.01766 4.04538 * 1.46634 0.26236 0.00000 * | |
6510 // | |
6511 HMMER3/b [3.0 | March 2010] | |
6512 NAME 3_End_Alveolata_58S_end_twelvec_long | |
6513 LENG 45 | |
6514 ALPH DNA | |
6515 RF no | |
6516 CS no | |
6517 MAP yes | |
6518 DATE Wed Feb 29 22:50:07 2012 | |
6519 NSEQ 12 | |
6520 EFFN 3.870117 | |
6521 CKSUM 3267954346 | |
6522 STATS LOCAL MSV -7.1098 0.71933 | |
6523 STATS LOCAL VITERBI -7.7778 0.71933 | |
6524 STATS LOCAL FORWARD -4.1940 0.71933 | |
6525 HMM A C G T | |
6526 m->m m->i m->d i->m i->i d->m d->d | |
6527 COMPO 1.25985 1.20243 1.78234 1.39595 | |
6528 1.38629 1.38629 1.38629 1.38629 | |
6529 0.03350 4.10596 4.10596 1.46634 0.26236 0.00000 * | |
6530 1 3.61664 0.11030 3.65797 2.96085 1 - - | |
6531 1.38629 1.38629 1.38629 1.38629 | |
6532 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6533 2 3.25346 2.69972 3.29520 0.15423 2 - - | |
6534 1.38629 1.38629 1.38629 1.38629 | |
6535 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6536 3 3.05634 3.74778 0.10105 3.66961 3 - - | |
6537 1.38629 1.38629 1.38629 1.38629 | |
6538 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6539 4 0.12243 3.54056 2.90525 3.45780 4 - - | |
6540 1.38629 1.38629 1.38629 1.38629 | |
6541 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6542 5 0.12243 3.54056 2.90525 3.45780 5 - - | |
6543 1.38629 1.38629 1.38629 1.38629 | |
6544 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6545 6 3.61664 0.11030 3.65797 2.96085 6 - - | |
6546 1.38629 1.38629 1.38629 1.38629 | |
6547 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6548 7 3.05634 3.74778 0.10105 3.66961 7 - - | |
6549 1.38629 1.38629 1.38629 1.38629 | |
6550 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6551 8 3.25346 2.69972 3.29520 0.15423 8 - - | |
6552 1.38629 1.38629 1.38629 1.38629 | |
6553 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6554 9 0.12243 3.54056 2.90525 3.45780 9 - - | |
6555 1.38629 1.38629 1.38629 1.38629 | |
6556 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6557 10 0.12243 3.54056 2.90525 3.45780 10 - - | |
6558 1.38629 1.38629 1.38629 1.38629 | |
6559 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6560 11 3.61664 0.11030 3.65797 2.96085 11 - - | |
6561 1.38629 1.38629 1.38629 1.38629 | |
6562 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6563 12 3.61664 0.11030 3.65797 2.96085 12 - - | |
6564 1.38629 1.38629 1.38629 1.38629 | |
6565 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6566 13 0.12243 3.54056 2.90525 3.45780 13 - - | |
6567 1.38629 1.38629 1.38629 1.38629 | |
6568 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6569 14 0.12243 3.54056 2.90525 3.45780 14 - - | |
6570 1.38629 1.38629 1.38629 1.38629 | |
6571 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6572 15 3.61664 0.11030 3.65797 2.96085 15 - - | |
6573 1.38629 1.38629 1.38629 1.38629 | |
6574 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6575 16 0.12243 3.54056 2.90525 3.45780 16 - - | |
6576 1.38629 1.38629 1.38629 1.38629 | |
6577 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6578 17 3.61664 0.11030 3.65797 2.96085 17 - - | |
6579 1.38629 1.38629 1.38629 1.38629 | |
6580 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6581 18 0.12243 3.54056 2.90525 3.45780 18 - - | |
6582 1.38629 1.38629 1.38629 1.38629 | |
6583 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6584 19 3.61664 0.11030 3.65797 2.96085 19 - - | |
6585 1.38629 1.38629 1.38629 1.38629 | |
6586 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6587 20 2.26557 2.24150 1.36887 0.62448 20 - - | |
6588 1.38629 1.38629 1.38629 1.38629 | |
6589 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6590 21 3.61664 0.11030 3.65797 2.96085 21 - - | |
6591 1.38629 1.38629 1.38629 1.38629 | |
6592 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6593 22 3.25346 2.69972 3.29520 0.15423 22 - - | |
6594 1.38629 1.38629 1.38629 1.38629 | |
6595 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6596 23 3.25346 2.69972 3.29520 0.15423 23 - - | |
6597 1.38629 1.38629 1.38629 1.38629 | |
6598 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6599 24 3.05634 3.74778 0.10105 3.66961 24 - - | |
6600 1.38629 1.38629 1.38629 1.38629 | |
6601 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6602 25 3.25346 2.69972 3.29520 0.15423 25 - - | |
6603 1.38629 1.38629 1.38629 1.38629 | |
6604 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6605 26 0.12243 3.54056 2.90525 3.45780 26 - - | |
6606 1.38629 1.38629 1.38629 1.38629 | |
6607 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6608 27 3.61664 0.11030 3.65797 2.96085 27 - - | |
6609 1.38629 1.38629 1.38629 1.38629 | |
6610 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6611 28 3.05634 3.74778 0.10105 3.66961 28 - - | |
6612 1.38629 1.38629 1.38629 1.38629 | |
6613 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6614 29 2.26012 2.49659 2.82398 0.28246 29 - - | |
6615 1.38629 1.38629 1.38629 1.38629 | |
6616 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6617 30 3.61664 0.11030 3.65797 2.96085 30 - - | |
6618 1.38629 1.38629 1.38629 1.38629 | |
6619 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6620 31 3.61664 0.11030 3.65797 2.96085 31 - - | |
6621 1.38629 1.38629 1.38629 1.38629 | |
6622 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6623 32 0.12243 3.54056 2.90525 3.45780 32 - - | |
6624 1.38629 1.38629 1.38629 1.38629 | |
6625 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6626 33 3.25346 2.69972 3.29520 0.15423 33 - - | |
6627 1.38629 1.38629 1.38629 1.38629 | |
6628 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6629 34 2.77036 0.40521 2.83796 1.55128 34 - - | |
6630 1.38629 1.38629 1.38629 1.38629 | |
6631 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6632 35 3.25346 2.69972 3.29520 0.15423 35 - - | |
6633 1.38629 1.38629 1.38629 1.38629 | |
6634 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6635 36 3.61664 0.11030 3.65797 2.96085 36 - - | |
6636 1.38629 1.38629 1.38629 1.38629 | |
6637 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6638 37 0.12243 3.54056 2.90525 3.45780 37 - - | |
6639 1.38629 1.38629 1.38629 1.38629 | |
6640 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6641 38 3.05634 3.74778 0.10105 3.66961 38 - - | |
6642 1.38629 1.38629 1.38629 1.38629 | |
6643 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6644 39 3.25346 2.69972 3.29520 0.15423 39 - - | |
6645 1.38629 1.38629 1.38629 1.38629 | |
6646 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6647 40 3.05634 3.74778 0.10105 3.66961 40 - - | |
6648 1.38629 1.38629 1.38629 1.38629 | |
6649 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6650 41 0.12243 3.54056 2.90525 3.45780 41 - - | |
6651 1.38629 1.38629 1.38629 1.38629 | |
6652 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6653 42 0.12243 3.54056 2.90525 3.45780 42 - - | |
6654 1.38629 1.38629 1.38629 1.38629 | |
6655 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6656 43 3.25346 2.69972 3.29520 0.15423 43 - - | |
6657 1.38629 1.38629 1.38629 1.38629 | |
6658 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6659 44 2.52094 0.74045 2.59225 1.00004 44 - - | |
6660 1.38629 1.38629 1.38629 1.38629 | |
6661 0.03350 4.10596 4.10596 1.46634 0.26236 1.09861 0.40547 | |
6662 45 2.52094 0.74045 2.59225 1.00004 45 - - | |
6663 1.38629 1.38629 1.38629 1.38629 | |
6664 0.01689 4.08935 * 1.46634 0.26236 0.00000 * | |
6665 // | |
6666 HMMER3/b [3.0 | March 2010] | |
6667 NAME 3_End_Alveolata_58S_end_twentya_long | |
6668 LENG 45 | |
6669 ALPH DNA | |
6670 RF no | |
6671 CS no | |
6672 MAP yes | |
6673 DATE Wed Feb 29 22:56:02 2012 | |
6674 NSEQ 4 | |
6675 EFFN 3.566406 | |
6676 CKSUM 1107581771 | |
6677 STATS LOCAL MSV -7.4293 0.71932 | |
6678 STATS LOCAL VITERBI -7.8373 0.71932 | |
6679 STATS LOCAL FORWARD -3.8028 0.71932 | |
6680 HMM A C G T | |
6681 m->m m->i m->d i->m i->i d->m d->d | |
6682 COMPO 1.82161 1.57746 1.30423 1.02067 | |
6683 1.38629 1.38629 1.38629 1.38629 | |
6684 0.03530 4.05463 4.05463 1.46634 0.26236 0.00000 * | |
6685 1 3.51925 0.12039 3.56498 2.89129 1 - - | |
6686 1.38629 1.38629 1.38629 1.38629 | |
6687 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6688 2 2.99911 3.66324 0.10922 3.57588 2 - - | |
6689 1.38629 1.38629 1.38629 1.38629 | |
6690 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6691 3 3.51925 0.12039 3.56498 2.89129 3 - - | |
6692 1.38629 1.38629 1.38629 1.38629 | |
6693 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6694 4 0.13239 3.45521 2.85039 3.36407 4 - - | |
6695 1.38629 1.38629 1.38629 1.38629 | |
6696 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6697 5 3.51925 0.12039 3.56498 2.89129 5 - - | |
6698 1.38629 1.38629 1.38629 1.38629 | |
6699 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6700 6 2.65809 1.57623 2.72240 0.41939 6 - - | |
6701 1.38629 1.38629 1.38629 1.38629 | |
6702 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6703 7 3.16491 2.64359 3.21012 0.16685 7 - - | |
6704 1.38629 1.38629 1.38629 1.38629 | |
6705 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6706 8 2.99911 3.66324 0.10922 3.57588 8 - - | |
6707 1.38629 1.38629 1.38629 1.38629 | |
6708 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6709 9 2.99911 3.66324 0.10922 3.57588 9 - - | |
6710 1.38629 1.38629 1.38629 1.38629 | |
6711 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6712 10 3.51925 0.12039 3.56498 2.89129 10 - - | |
6713 1.38629 1.38629 1.38629 1.38629 | |
6714 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6715 11 2.99911 3.66324 0.10922 3.57588 11 - - | |
6716 1.38629 1.38629 1.38629 1.38629 | |
6717 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6718 12 3.51925 0.12039 3.56498 2.89129 12 - - | |
6719 1.38629 1.38629 1.38629 1.38629 | |
6720 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6721 13 3.16491 2.64359 3.21012 0.16685 13 - - | |
6722 1.38629 1.38629 1.38629 1.38629 | |
6723 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6724 14 0.13239 3.45521 2.85039 3.36407 14 - - | |
6725 1.38629 1.38629 1.38629 1.38629 | |
6726 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6727 15 2.99911 3.66324 0.10922 3.57588 15 - - | |
6728 1.38629 1.38629 1.38629 1.38629 | |
6729 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6730 16 3.16491 2.64359 3.21012 0.16685 16 - - | |
6731 1.38629 1.38629 1.38629 1.38629 | |
6732 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6733 17 3.16491 2.64359 3.21012 0.16685 17 - - | |
6734 1.38629 1.38629 1.38629 1.38629 | |
6735 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6736 18 3.16491 2.64359 3.21012 0.16685 18 - - | |
6737 1.38629 1.38629 1.38629 1.38629 | |
6738 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6739 19 0.13239 3.45521 2.85039 3.36407 19 - - | |
6740 1.38629 1.38629 1.38629 1.38629 | |
6741 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6742 20 3.51925 0.12039 3.56498 2.89129 20 - - | |
6743 1.38629 1.38629 1.38629 1.38629 | |
6744 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6745 21 3.16491 2.64359 3.21012 0.16685 21 - - | |
6746 1.38629 1.38629 1.38629 1.38629 | |
6747 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6748 22 0.13239 3.45521 2.85039 3.36407 22 - - | |
6749 1.38629 1.38629 1.38629 1.38629 | |
6750 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6751 23 2.99911 3.66324 0.10922 3.57588 23 - - | |
6752 1.38629 1.38629 1.38629 1.38629 | |
6753 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6754 24 3.51925 0.12039 3.56498 2.89129 24 - - | |
6755 1.38629 1.38629 1.38629 1.38629 | |
6756 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6757 25 0.13239 3.45521 2.85039 3.36407 25 - - | |
6758 1.38629 1.38629 1.38629 1.38629 | |
6759 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6760 26 3.16491 2.64359 3.21012 0.16685 26 - - | |
6761 1.38629 1.38629 1.38629 1.38629 | |
6762 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6763 27 2.99911 3.66324 0.10922 3.57588 27 - - | |
6764 1.38629 1.38629 1.38629 1.38629 | |
6765 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6766 28 3.16491 2.64359 3.21012 0.16685 28 - - | |
6767 1.38629 1.38629 1.38629 1.38629 | |
6768 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6769 29 3.16491 2.64359 3.21012 0.16685 29 - - | |
6770 1.38629 1.38629 1.38629 1.38629 | |
6771 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6772 30 3.16491 2.64359 3.21012 0.16685 30 - - | |
6773 1.38629 1.38629 1.38629 1.38629 | |
6774 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6775 31 2.99911 3.66324 0.10922 3.57588 31 - - | |
6776 1.38629 1.38629 1.38629 1.38629 | |
6777 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6778 32 3.16491 2.64359 3.21012 0.16685 32 - - | |
6779 1.38629 1.38629 1.38629 1.38629 | |
6780 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6781 33 3.16491 2.64359 3.21012 0.16685 33 - - | |
6782 1.38629 1.38629 1.38629 1.38629 | |
6783 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6784 34 3.16491 2.64359 3.21012 0.16685 34 - - | |
6785 1.38629 1.38629 1.38629 1.38629 | |
6786 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6787 35 3.51925 0.12039 3.56498 2.89129 35 - - | |
6788 1.38629 1.38629 1.38629 1.38629 | |
6789 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6790 36 0.13239 3.45521 2.85039 3.36407 36 - - | |
6791 1.38629 1.38629 1.38629 1.38629 | |
6792 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6793 37 2.99911 3.66324 0.10922 3.57588 37 - - | |
6794 1.38629 1.38629 1.38629 1.38629 | |
6795 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6796 38 3.16491 2.64359 3.21012 0.16685 38 - - | |
6797 1.38629 1.38629 1.38629 1.38629 | |
6798 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6799 39 2.99911 3.66324 0.10922 3.57588 39 - - | |
6800 1.38629 1.38629 1.38629 1.38629 | |
6801 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6802 40 3.16491 2.64359 3.21012 0.16685 40 - - | |
6803 1.38629 1.38629 1.38629 1.38629 | |
6804 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6805 41 2.99911 3.66324 0.10922 3.57588 41 - - | |
6806 1.38629 1.38629 1.38629 1.38629 | |
6807 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6808 42 3.16491 2.64359 3.21012 0.16685 42 - - | |
6809 1.38629 1.38629 1.38629 1.38629 | |
6810 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6811 43 3.16491 2.64359 3.21012 0.16685 43 - - | |
6812 1.38629 1.38629 1.38629 1.38629 | |
6813 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6814 44 2.31607 2.25114 1.58918 0.52430 44 - - | |
6815 1.38629 1.38629 1.38629 1.38629 | |
6816 0.03530 4.05463 4.05463 1.46634 0.26236 1.09861 0.40547 | |
6817 45 2.99911 3.66324 0.10922 3.57588 45 - - | |
6818 1.38629 1.38629 1.38629 1.38629 | |
6819 0.01781 4.03714 * 1.46634 0.26236 0.00000 * | |
6820 // | |
6821 HMMER3/b [3.0 | March 2010] | |
6822 NAME 3_End_Alveolata_58S_end_twentyb_long | |
6823 LENG 45 | |
6824 ALPH DNA | |
6825 RF no | |
6826 CS no | |
6827 MAP yes | |
6828 DATE Wed Feb 29 22:56:09 2012 | |
6829 NSEQ 2 | |
6830 EFFN 2.000000 | |
6831 CKSUM 708606259 | |
6832 STATS LOCAL MSV -7.4772 0.72918 | |
6833 STATS LOCAL VITERBI -8.3653 0.72918 | |
6834 STATS LOCAL FORWARD -3.3564 0.72918 | |
6835 HMM A C G T | |
6836 m->m m->i m->d i->m i->i d->m d->d | |
6837 COMPO 1.62240 1.63643 1.25842 1.12764 | |
6838 1.38629 1.38629 1.38629 1.38629 | |
6839 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
6840 1 0.23862 2.84929 2.43386 2.70756 1 - - | |
6841 1.38629 1.38629 1.38629 1.38629 | |
6842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6843 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
6844 1.38629 1.38629 1.38629 1.38629 | |
6845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6846 3 2.53331 3.02441 0.20344 2.88069 3 - - | |
6847 1.38629 1.38629 1.38629 1.38629 | |
6848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6849 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
6850 1.38629 1.38629 1.38629 1.38629 | |
6851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6852 5 0.23862 2.84929 2.43386 2.70756 5 - - | |
6853 1.38629 1.38629 1.38629 1.38629 | |
6854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6855 6 0.23862 2.84929 2.43386 2.70756 6 - - | |
6856 1.38629 1.38629 1.38629 1.38629 | |
6857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6858 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
6859 1.38629 1.38629 1.38629 1.38629 | |
6860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6861 8 2.57915 2.25909 2.64442 0.28946 8 - - | |
6862 1.38629 1.38629 1.38629 1.38629 | |
6863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6864 9 2.53331 3.02441 0.20344 2.88069 9 - - | |
6865 1.38629 1.38629 1.38629 1.38629 | |
6866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6867 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
6868 1.38629 1.38629 1.38629 1.38629 | |
6869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6870 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
6871 1.38629 1.38629 1.38629 1.38629 | |
6872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6873 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
6874 1.38629 1.38629 1.38629 1.38629 | |
6875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6876 13 2.81865 0.23582 2.88868 2.35662 13 - - | |
6877 1.38629 1.38629 1.38629 1.38629 | |
6878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6879 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
6880 1.38629 1.38629 1.38629 1.38629 | |
6881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6882 15 0.23862 2.84929 2.43386 2.70756 15 - - | |
6883 1.38629 1.38629 1.38629 1.38629 | |
6884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6885 16 2.81865 0.23582 2.88868 2.35662 16 - - | |
6886 1.38629 1.38629 1.38629 1.38629 | |
6887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6888 17 1.03732 1.95876 1.96551 1.00928 17 - - | |
6889 1.38629 1.38629 1.38629 1.38629 | |
6890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6891 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
6892 1.38629 1.38629 1.38629 1.38629 | |
6893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6894 19 2.57915 2.25909 2.64442 0.28946 19 - - | |
6895 1.38629 1.38629 1.38629 1.38629 | |
6896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6897 20 2.53331 3.02441 0.20344 2.88069 20 - - | |
6898 1.38629 1.38629 1.38629 1.38629 | |
6899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6900 21 2.57915 2.25909 2.64442 0.28946 21 - - | |
6901 1.38629 1.38629 1.38629 1.38629 | |
6902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6903 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
6904 1.38629 1.38629 1.38629 1.38629 | |
6905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6906 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
6907 1.38629 1.38629 1.38629 1.38629 | |
6908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6909 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
6910 1.38629 1.38629 1.38629 1.38629 | |
6911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6912 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
6913 1.38629 1.38629 1.38629 1.38629 | |
6914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6915 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
6916 1.38629 1.38629 1.38629 1.38629 | |
6917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6918 27 2.53331 3.02441 0.20344 2.88069 27 - - | |
6919 1.38629 1.38629 1.38629 1.38629 | |
6920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6921 28 2.57915 2.25909 2.64442 0.28946 28 - - | |
6922 1.38629 1.38629 1.38629 1.38629 | |
6923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6924 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
6925 1.38629 1.38629 1.38629 1.38629 | |
6926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6927 30 2.57915 2.25909 2.64442 0.28946 30 - - | |
6928 1.38629 1.38629 1.38629 1.38629 | |
6929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6930 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
6931 1.38629 1.38629 1.38629 1.38629 | |
6932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6933 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
6934 1.38629 1.38629 1.38629 1.38629 | |
6935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6936 33 2.57915 2.25909 2.64442 0.28946 33 - - | |
6937 1.38629 1.38629 1.38629 1.38629 | |
6938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6939 34 2.57915 2.25909 2.64442 0.28946 34 - - | |
6940 1.38629 1.38629 1.38629 1.38629 | |
6941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6942 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
6943 1.38629 1.38629 1.38629 1.38629 | |
6944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6945 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
6946 1.38629 1.38629 1.38629 1.38629 | |
6947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6948 37 2.53331 3.02441 0.20344 2.88069 37 - - | |
6949 1.38629 1.38629 1.38629 1.38629 | |
6950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6951 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
6952 1.38629 1.38629 1.38629 1.38629 | |
6953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6954 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
6955 1.38629 1.38629 1.38629 1.38629 | |
6956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6957 40 2.57915 2.25909 2.64442 0.28946 40 - - | |
6958 1.38629 1.38629 1.38629 1.38629 | |
6959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6960 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
6961 1.38629 1.38629 1.38629 1.38629 | |
6962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6963 42 2.57915 2.25909 2.64442 0.28946 42 - - | |
6964 1.38629 1.38629 1.38629 1.38629 | |
6965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6966 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
6967 1.38629 1.38629 1.38629 1.38629 | |
6968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6969 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
6970 1.38629 1.38629 1.38629 1.38629 | |
6971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
6972 45 2.53331 3.02441 0.20344 2.88069 45 - - | |
6973 1.38629 1.38629 1.38629 1.38629 | |
6974 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
6975 // | |
6976 HMMER3/b [3.0 | March 2010] | |
6977 NAME 3_End_Alveolata_58S_end_two_long | |
6978 LENG 45 | |
6979 ALPH DNA | |
6980 RF no | |
6981 CS no | |
6982 MAP yes | |
6983 DATE Wed Feb 29 22:42:51 2012 | |
6984 NSEQ 10 | |
6985 EFFN 3.500977 | |
6986 CKSUM 3395317246 | |
6987 STATS LOCAL MSV -7.5727 0.71933 | |
6988 STATS LOCAL VITERBI -7.6197 0.71933 | |
6989 STATS LOCAL FORWARD -4.0622 0.71933 | |
6990 HMM A C G T | |
6991 m->m m->i m->d i->m i->i d->m d->d | |
6992 COMPO 1.62863 1.30265 1.45636 1.20762 | |
6993 1.38629 1.38629 1.38629 1.38629 | |
6994 0.03571 4.04322 4.04322 1.46634 0.26236 0.00000 * | |
6995 1 3.49685 0.12286 3.54356 2.87517 1 - - | |
6996 1.38629 1.38629 1.38629 1.38629 | |
6997 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
6998 2 2.98580 3.64368 0.11122 3.55423 2 - - | |
6999 1.38629 1.38629 1.38629 1.38629 | |
7000 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7001 3 3.49685 0.12286 3.54356 2.87517 3 - - | |
7002 1.38629 1.38629 1.38629 1.38629 | |
7003 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7004 4 3.14491 2.63090 3.19089 0.16986 4 - - | |
7005 1.38629 1.38629 1.38629 1.38629 | |
7006 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7007 5 3.14491 2.63090 3.19089 0.16986 5 - - | |
7008 1.38629 1.38629 1.38629 1.38629 | |
7009 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7010 6 3.14491 2.63090 3.19089 0.16986 6 - - | |
7011 1.38629 1.38629 1.38629 1.38629 | |
7012 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7013 7 3.49685 0.12286 3.54356 2.87517 7 - - | |
7014 1.38629 1.38629 1.38629 1.38629 | |
7015 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7016 8 2.98580 3.64368 0.11122 3.55423 8 - - | |
7017 1.38629 1.38629 1.38629 1.38629 | |
7018 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7019 9 2.98580 3.64368 0.11122 3.55423 9 - - | |
7020 1.38629 1.38629 1.38629 1.38629 | |
7021 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7022 10 2.98580 3.64368 0.11122 3.55423 10 - - | |
7023 1.38629 1.38629 1.38629 1.38629 | |
7024 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7025 11 0.13479 3.43568 2.83780 3.34265 11 - - | |
7026 1.38629 1.38629 1.38629 1.38629 | |
7027 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7028 12 3.14491 2.63090 3.19089 0.16986 12 - - | |
7029 1.38629 1.38629 1.38629 1.38629 | |
7030 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7031 13 0.13479 3.43568 2.83780 3.34265 13 - - | |
7032 1.38629 1.38629 1.38629 1.38629 | |
7033 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7034 14 3.14491 2.63090 3.19089 0.16986 14 - - | |
7035 1.38629 1.38629 1.38629 1.38629 | |
7036 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7037 15 3.49685 0.12286 3.54356 2.87517 15 - - | |
7038 1.38629 1.38629 1.38629 1.38629 | |
7039 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7040 16 3.49685 0.12286 3.54356 2.87517 16 - - | |
7041 1.38629 1.38629 1.38629 1.38629 | |
7042 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7043 17 3.49685 0.12286 3.54356 2.87517 17 - - | |
7044 1.38629 1.38629 1.38629 1.38629 | |
7045 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7046 18 3.14491 2.63090 3.19089 0.16986 18 - - | |
7047 1.38629 1.38629 1.38629 1.38629 | |
7048 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7049 19 2.98580 3.64368 0.11122 3.55423 19 - - | |
7050 1.38629 1.38629 1.38629 1.38629 | |
7051 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7052 20 0.13479 3.43568 2.83780 3.34265 20 - - | |
7053 1.38629 1.38629 1.38629 1.38629 | |
7054 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7055 21 0.13479 3.43568 2.83780 3.34265 21 - - | |
7056 1.38629 1.38629 1.38629 1.38629 | |
7057 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7058 22 0.13479 3.43568 2.83780 3.34265 22 - - | |
7059 1.38629 1.38629 1.38629 1.38629 | |
7060 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7061 23 2.98580 3.64368 0.11122 3.55423 23 - - | |
7062 1.38629 1.38629 1.38629 1.38629 | |
7063 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7064 24 3.49685 0.12286 3.54356 2.87517 24 - - | |
7065 1.38629 1.38629 1.38629 1.38629 | |
7066 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7067 25 0.13479 3.43568 2.83780 3.34265 25 - - | |
7068 1.38629 1.38629 1.38629 1.38629 | |
7069 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7070 26 3.14491 2.63090 3.19089 0.16986 26 - - | |
7071 1.38629 1.38629 1.38629 1.38629 | |
7072 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7073 27 2.98580 3.64368 0.11122 3.55423 27 - - | |
7074 1.38629 1.38629 1.38629 1.38629 | |
7075 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7076 28 3.49685 0.12286 3.54356 2.87517 28 - - | |
7077 1.38629 1.38629 1.38629 1.38629 | |
7078 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7079 29 3.49685 0.12286 3.54356 2.87517 29 - - | |
7080 1.38629 1.38629 1.38629 1.38629 | |
7081 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7082 30 3.14491 2.63090 3.19089 0.16986 30 - - | |
7083 1.38629 1.38629 1.38629 1.38629 | |
7084 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7085 31 2.62489 2.97458 0.24797 2.34233 31 - - | |
7086 1.38629 1.38629 1.38629 1.38629 | |
7087 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7088 32 3.49685 0.12286 3.54356 2.87517 32 - - | |
7089 1.38629 1.38629 1.38629 1.38629 | |
7090 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7091 33 3.14491 2.63090 3.19089 0.16986 33 - - | |
7092 1.38629 1.38629 1.38629 1.38629 | |
7093 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7094 34 3.14491 2.63090 3.19089 0.16986 34 - - | |
7095 1.38629 1.38629 1.38629 1.38629 | |
7096 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7097 35 3.49685 0.12286 3.54356 2.87517 35 - - | |
7098 1.38629 1.38629 1.38629 1.38629 | |
7099 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7100 36 0.13479 3.43568 2.83780 3.34265 36 - - | |
7101 1.38629 1.38629 1.38629 1.38629 | |
7102 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7103 37 2.98580 3.64368 0.11122 3.55423 37 - - | |
7104 1.38629 1.38629 1.38629 1.38629 | |
7105 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7106 38 3.14491 2.63090 3.19089 0.16986 38 - - | |
7107 1.38629 1.38629 1.38629 1.38629 | |
7108 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7109 39 2.98580 3.64368 0.11122 3.55423 39 - - | |
7110 1.38629 1.38629 1.38629 1.38629 | |
7111 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7112 40 3.14491 2.63090 3.19089 0.16986 40 - - | |
7113 1.38629 1.38629 1.38629 1.38629 | |
7114 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7115 41 3.49685 0.12286 3.54356 2.87517 41 - - | |
7116 1.38629 1.38629 1.38629 1.38629 | |
7117 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7118 42 3.14491 2.63090 3.19089 0.16986 42 - - | |
7119 1.38629 1.38629 1.38629 1.38629 | |
7120 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7121 43 0.13479 3.43568 2.83780 3.34265 43 - - | |
7122 1.38629 1.38629 1.38629 1.38629 | |
7123 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7124 44 1.77036 2.10336 1.59709 0.68280 44 - - | |
7125 1.38629 1.38629 1.38629 1.38629 | |
7126 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 | |
7127 45 3.14491 2.63090 3.19089 0.16986 45 - - | |
7128 1.38629 1.38629 1.38629 1.38629 | |
7129 0.01802 4.02553 * 1.46634 0.26236 0.00000 * | |
7130 // | |
7131 HMMER3/b [3.0 | March 2010] | |
7132 NAME 2_5.8_Alveolata_58S_start_eighta_long | |
7133 LENG 45 | |
7134 ALPH DNA | |
7135 RF no | |
7136 CS no | |
7137 MAP yes | |
7138 DATE Wed Feb 29 13:27:07 2012 | |
7139 NSEQ 3 | |
7140 EFFN 3.000000 | |
7141 CKSUM 3325641686 | |
7142 STATS LOCAL MSV -7.9406 0.72105 | |
7143 STATS LOCAL VITERBI -7.8084 0.72105 | |
7144 STATS LOCAL FORWARD -4.1819 0.72105 | |
7145 HMM A C G T | |
7146 m->m m->i m->d i->m i->i d->m d->d | |
7147 COMPO 1.44871 1.52892 1.22347 1.36984 | |
7148 1.38629 1.38629 1.38629 1.38629 | |
7149 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
7150 1 2.86982 3.47591 0.13017 3.36931 1 - - | |
7151 1.38629 1.38629 1.38629 1.38629 | |
7152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7153 2 2.97980 2.52563 3.03204 0.19727 2 - - | |
7154 1.38629 1.38629 1.38629 1.38629 | |
7155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7156 3 2.97980 2.52563 3.03204 0.19727 3 - - | |
7157 1.38629 1.38629 1.38629 1.38629 | |
7158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7159 4 3.30705 0.14631 3.36166 2.73626 4 - - | |
7160 1.38629 1.38629 1.38629 1.38629 | |
7161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7162 5 0.15719 3.27118 2.73043 3.16274 5 - - | |
7163 1.38629 1.38629 1.38629 1.38629 | |
7164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7165 6 2.86982 3.47591 0.13017 3.36931 6 - - | |
7166 1.38629 1.38629 1.38629 1.38629 | |
7167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7168 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
7169 1.38629 1.38629 1.38629 1.38629 | |
7170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7171 8 3.30705 0.14631 3.36166 2.73626 8 - - | |
7172 1.38629 1.38629 1.38629 1.38629 | |
7173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7174 9 0.15719 3.27118 2.73043 3.16274 9 - - | |
7175 1.38629 1.38629 1.38629 1.38629 | |
7176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7177 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
7178 1.38629 1.38629 1.38629 1.38629 | |
7179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7180 11 3.30705 0.14631 3.36166 2.73626 11 - - | |
7181 1.38629 1.38629 1.38629 1.38629 | |
7182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7183 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
7184 1.38629 1.38629 1.38629 1.38629 | |
7185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7186 13 3.30705 0.14631 3.36166 2.73626 13 - - | |
7187 1.38629 1.38629 1.38629 1.38629 | |
7188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7189 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
7190 1.38629 1.38629 1.38629 1.38629 | |
7191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7192 15 2.86982 3.47591 0.13017 3.36931 15 - - | |
7193 1.38629 1.38629 1.38629 1.38629 | |
7194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7195 16 2.86982 3.47591 0.13017 3.36931 16 - - | |
7196 1.38629 1.38629 1.38629 1.38629 | |
7197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7198 17 0.15719 3.27118 2.73043 3.16274 17 - - | |
7199 1.38629 1.38629 1.38629 1.38629 | |
7200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7201 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
7202 1.38629 1.38629 1.38629 1.38629 | |
7203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7204 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
7205 1.38629 1.38629 1.38629 1.38629 | |
7206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7207 20 2.97980 2.52563 3.03204 0.19727 20 - - | |
7208 1.38629 1.38629 1.38629 1.38629 | |
7209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7210 21 2.97980 2.52563 3.03204 0.19727 21 - - | |
7211 1.38629 1.38629 1.38629 1.38629 | |
7212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7213 22 2.97980 2.52563 3.03204 0.19727 22 - - | |
7214 1.38629 1.38629 1.38629 1.38629 | |
7215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7216 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
7217 1.38629 1.38629 1.38629 1.38629 | |
7218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7219 24 2.86982 3.47591 0.13017 3.36931 24 - - | |
7220 1.38629 1.38629 1.38629 1.38629 | |
7221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7222 25 2.86982 3.47591 0.13017 3.36931 25 - - | |
7223 1.38629 1.38629 1.38629 1.38629 | |
7224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7225 26 3.30705 0.14631 3.36166 2.73626 26 - - | |
7226 1.38629 1.38629 1.38629 1.38629 | |
7227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7228 27 3.30705 0.14631 3.36166 2.73626 27 - - | |
7229 1.38629 1.38629 1.38629 1.38629 | |
7230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7231 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
7232 1.38629 1.38629 1.38629 1.38629 | |
7233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7234 29 0.15719 3.27118 2.73043 3.16274 29 - - | |
7235 1.38629 1.38629 1.38629 1.38629 | |
7236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7237 30 2.86982 3.47591 0.13017 3.36931 30 - - | |
7238 1.38629 1.38629 1.38629 1.38629 | |
7239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7240 31 3.30705 0.14631 3.36166 2.73626 31 - - | |
7241 1.38629 1.38629 1.38629 1.38629 | |
7242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7243 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
7244 1.38629 1.38629 1.38629 1.38629 | |
7245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7246 33 2.86982 3.47591 0.13017 3.36931 33 - - | |
7247 1.38629 1.38629 1.38629 1.38629 | |
7248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7249 34 0.15719 3.27118 2.73043 3.16274 34 - - | |
7250 1.38629 1.38629 1.38629 1.38629 | |
7251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7252 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
7253 1.38629 1.38629 1.38629 1.38629 | |
7254 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7255 36 0.54754 2.55777 1.36722 2.41535 36 - - | |
7256 1.38629 1.38629 1.38629 1.38629 | |
7257 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7258 37 0.15719 3.27118 2.73043 3.16274 37 - - | |
7259 1.38629 1.38629 1.38629 1.38629 | |
7260 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7261 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
7262 1.38629 1.38629 1.38629 1.38629 | |
7263 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7264 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
7265 1.38629 1.38629 1.38629 1.38629 | |
7266 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7267 40 0.15719 3.27118 2.73043 3.16274 40 - - | |
7268 1.38629 1.38629 1.38629 1.38629 | |
7269 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7270 41 0.15719 3.27118 2.73043 3.16274 41 - - | |
7271 1.38629 1.38629 1.38629 1.38629 | |
7272 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7273 42 2.86982 3.47591 0.13017 3.36931 42 - - | |
7274 1.38629 1.38629 1.38629 1.38629 | |
7275 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7276 43 0.54754 2.55777 1.36722 2.41535 43 - - | |
7277 1.38629 1.38629 1.38629 1.38629 | |
7278 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7279 44 2.86982 3.47591 0.13017 3.36931 44 - - | |
7280 1.38629 1.38629 1.38629 1.38629 | |
7281 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
7282 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
7283 1.38629 1.38629 1.38629 1.38629 | |
7284 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
7285 // | |
7286 HMMER3/b [3.0 | March 2010] | |
7287 NAME 2_5.8_Alveolata_58S_start_eightb_long | |
7288 LENG 45 | |
7289 ALPH DNA | |
7290 RF no | |
7291 CS no | |
7292 MAP yes | |
7293 DATE Wed Feb 29 13:27:12 2012 | |
7294 NSEQ 2 | |
7295 EFFN 2.000000 | |
7296 CKSUM 3604720587 | |
7297 STATS LOCAL MSV -7.3490 0.72800 | |
7298 STATS LOCAL VITERBI -8.3720 0.72800 | |
7299 STATS LOCAL FORWARD -3.6028 0.72800 | |
7300 HMM A C G T | |
7301 m->m m->i m->d i->m i->i d->m d->d | |
7302 COMPO 1.39767 1.46026 1.31436 1.37831 | |
7303 1.38629 1.38629 1.38629 1.38629 | |
7304 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
7305 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
7306 1.38629 1.38629 1.38629 1.38629 | |
7307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7308 2 2.57915 2.25909 2.64442 0.28946 2 - - | |
7309 1.38629 1.38629 1.38629 1.38629 | |
7310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7311 3 2.57915 2.25909 2.64442 0.28946 3 - - | |
7312 1.38629 1.38629 1.38629 1.38629 | |
7313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7314 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
7315 1.38629 1.38629 1.38629 1.38629 | |
7316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7317 5 0.23862 2.84929 2.43386 2.70756 5 - - | |
7318 1.38629 1.38629 1.38629 1.38629 | |
7319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7320 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
7321 1.38629 1.38629 1.38629 1.38629 | |
7322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7323 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
7324 1.38629 1.38629 1.38629 1.38629 | |
7325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7326 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
7327 1.38629 1.38629 1.38629 1.38629 | |
7328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7329 9 0.23862 2.84929 2.43386 2.70756 9 - - | |
7330 1.38629 1.38629 1.38629 1.38629 | |
7331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7332 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
7333 1.38629 1.38629 1.38629 1.38629 | |
7334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7335 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
7336 1.38629 1.38629 1.38629 1.38629 | |
7337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7338 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
7339 1.38629 1.38629 1.38629 1.38629 | |
7340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7341 13 2.81865 0.23582 2.88868 2.35662 13 - - | |
7342 1.38629 1.38629 1.38629 1.38629 | |
7343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7344 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
7345 1.38629 1.38629 1.38629 1.38629 | |
7346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7347 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
7348 1.38629 1.38629 1.38629 1.38629 | |
7349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7350 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
7351 1.38629 1.38629 1.38629 1.38629 | |
7352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7353 17 2.81865 0.23582 2.88868 2.35662 17 - - | |
7354 1.38629 1.38629 1.38629 1.38629 | |
7355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7356 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
7357 1.38629 1.38629 1.38629 1.38629 | |
7358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7359 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
7360 1.38629 1.38629 1.38629 1.38629 | |
7361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7362 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
7363 1.38629 1.38629 1.38629 1.38629 | |
7364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7365 21 2.57915 2.25909 2.64442 0.28946 21 - - | |
7366 1.38629 1.38629 1.38629 1.38629 | |
7367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7368 22 2.57915 2.25909 2.64442 0.28946 22 - - | |
7369 1.38629 1.38629 1.38629 1.38629 | |
7370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7371 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
7372 1.38629 1.38629 1.38629 1.38629 | |
7373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7374 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
7375 1.38629 1.38629 1.38629 1.38629 | |
7376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7377 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
7378 1.38629 1.38629 1.38629 1.38629 | |
7379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7380 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
7381 1.38629 1.38629 1.38629 1.38629 | |
7382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7383 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
7384 1.38629 1.38629 1.38629 1.38629 | |
7385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7386 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
7387 1.38629 1.38629 1.38629 1.38629 | |
7388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7389 29 0.23862 2.84929 2.43386 2.70756 29 - - | |
7390 1.38629 1.38629 1.38629 1.38629 | |
7391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7392 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
7393 1.38629 1.38629 1.38629 1.38629 | |
7394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7395 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
7396 1.38629 1.38629 1.38629 1.38629 | |
7397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7398 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
7399 1.38629 1.38629 1.38629 1.38629 | |
7400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7401 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
7402 1.38629 1.38629 1.38629 1.38629 | |
7403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7404 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
7405 1.38629 1.38629 1.38629 1.38629 | |
7406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7407 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
7408 1.38629 1.38629 1.38629 1.38629 | |
7409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7410 36 0.23862 2.84929 2.43386 2.70756 36 - - | |
7411 1.38629 1.38629 1.38629 1.38629 | |
7412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7413 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
7414 1.38629 1.38629 1.38629 1.38629 | |
7415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7416 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
7417 1.38629 1.38629 1.38629 1.38629 | |
7418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7419 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
7420 1.38629 1.38629 1.38629 1.38629 | |
7421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7422 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
7423 1.38629 1.38629 1.38629 1.38629 | |
7424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7425 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
7426 1.38629 1.38629 1.38629 1.38629 | |
7427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7428 42 2.53331 3.02441 0.20344 2.88069 42 - - | |
7429 1.38629 1.38629 1.38629 1.38629 | |
7430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7431 43 2.57915 2.25909 2.64442 0.28946 43 - - | |
7432 1.38629 1.38629 1.38629 1.38629 | |
7433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7434 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
7435 1.38629 1.38629 1.38629 1.38629 | |
7436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7437 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
7438 1.38629 1.38629 1.38629 1.38629 | |
7439 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
7440 // | |
7441 HMMER3/b [3.0 | March 2010] | |
7442 NAME 2_5.8_Alveolata_58S_start_elevena_long | |
7443 LENG 45 | |
7444 ALPH DNA | |
7445 RF no | |
7446 CS no | |
7447 MAP yes | |
7448 DATE Wed Feb 29 13:27:36 2012 | |
7449 NSEQ 32 | |
7450 EFFN 3.675781 | |
7451 CKSUM 3417897911 | |
7452 STATS LOCAL MSV -7.3843 0.71933 | |
7453 STATS LOCAL VITERBI -7.6506 0.71933 | |
7454 STATS LOCAL FORWARD -4.0339 0.71933 | |
7455 HMM A C G T | |
7456 m->m m->i m->d i->m i->i d->m d->d | |
7457 COMPO 1.25458 1.46041 1.35155 1.49690 | |
7458 1.38629 1.38629 1.38629 1.38629 | |
7459 0.03463 4.07342 4.07342 1.46634 0.26236 0.00000 * | |
7460 1 0.30737 2.17041 2.53008 2.64736 1 - - | |
7461 1.38629 1.38629 1.38629 1.38629 | |
7462 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7463 2 0.40424 1.86056 2.41150 2.43900 2 - - | |
7464 1.38629 1.38629 1.38629 1.38629 | |
7465 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7466 3 0.12858 3.48693 2.87081 3.39888 3 - - | |
7467 1.38629 1.38629 1.38629 1.38629 | |
7468 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7469 4 3.55554 0.11651 3.59965 2.91731 4 - - | |
7470 1.38629 1.38629 1.38629 1.38629 | |
7471 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7472 5 3.19761 2.66431 3.24155 0.16206 5 - - | |
7473 1.38629 1.38629 1.38629 1.38629 | |
7474 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7475 6 2.80026 2.50234 2.42463 0.26292 6 - - | |
7476 1.38629 1.38629 1.38629 1.38629 | |
7477 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7478 7 3.19761 2.66431 3.24155 0.16206 7 - - | |
7479 1.38629 1.38629 1.38629 1.38629 | |
7480 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7481 8 2.86129 0.33229 2.92687 1.76049 8 - - | |
7482 1.38629 1.38629 1.38629 1.38629 | |
7483 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7484 9 0.12858 3.48693 2.87081 3.39888 9 - - | |
7485 1.38629 1.38629 1.38629 1.38629 | |
7486 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7487 10 3.02055 3.69484 0.10609 3.61089 10 - - | |
7488 1.38629 1.38629 1.38629 1.38629 | |
7489 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7490 11 3.55554 0.11651 3.59965 2.91731 11 - - | |
7491 1.38629 1.38629 1.38629 1.38629 | |
7492 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7493 12 3.02055 3.69484 0.10609 3.61089 12 - - | |
7494 1.38629 1.38629 1.38629 1.38629 | |
7495 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7496 13 0.44013 2.76228 1.51098 2.62826 13 - - | |
7497 1.38629 1.38629 1.38629 1.38629 | |
7498 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7499 14 3.19761 2.66431 3.24155 0.16206 14 - - | |
7500 1.38629 1.38629 1.38629 1.38629 | |
7501 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7502 15 3.02055 3.69484 0.10609 3.61089 15 - - | |
7503 1.38629 1.38629 1.38629 1.38629 | |
7504 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7505 16 3.02055 3.69484 0.10609 3.61089 16 - - | |
7506 1.38629 1.38629 1.38629 1.38629 | |
7507 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7508 17 0.12858 3.48693 2.87081 3.39888 17 - - | |
7509 1.38629 1.38629 1.38629 1.38629 | |
7510 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7511 18 3.19761 2.66431 3.24155 0.16206 18 - - | |
7512 1.38629 1.38629 1.38629 1.38629 | |
7513 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7514 19 3.02055 3.69484 0.10609 3.61089 19 - - | |
7515 1.38629 1.38629 1.38629 1.38629 | |
7516 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7517 20 3.19761 2.66431 3.24155 0.16206 20 - - | |
7518 1.38629 1.38629 1.38629 1.38629 | |
7519 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7520 21 3.55554 0.11651 3.59965 2.91731 21 - - | |
7521 1.38629 1.38629 1.38629 1.38629 | |
7522 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7523 22 3.19761 2.66431 3.24155 0.16206 22 - - | |
7524 1.38629 1.38629 1.38629 1.38629 | |
7525 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7526 23 3.19761 2.66431 3.24155 0.16206 23 - - | |
7527 1.38629 1.38629 1.38629 1.38629 | |
7528 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7529 24 3.02055 3.69484 0.10609 3.61089 24 - - | |
7530 1.38629 1.38629 1.38629 1.38629 | |
7531 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7532 25 3.02055 3.69484 0.10609 3.61089 25 - - | |
7533 1.38629 1.38629 1.38629 1.38629 | |
7534 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7535 26 3.55554 0.11651 3.59965 2.91731 26 - - | |
7536 1.38629 1.38629 1.38629 1.38629 | |
7537 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7538 27 3.19761 2.66431 3.24155 0.16206 27 - - | |
7539 1.38629 1.38629 1.38629 1.38629 | |
7540 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7541 28 3.55554 0.11651 3.59965 2.91731 28 - - | |
7542 1.38629 1.38629 1.38629 1.38629 | |
7543 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7544 29 0.12858 3.48693 2.87081 3.39888 29 - - | |
7545 1.38629 1.38629 1.38629 1.38629 | |
7546 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7547 30 3.55554 0.11651 3.59965 2.91731 30 - - | |
7548 1.38629 1.38629 1.38629 1.38629 | |
7549 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7550 31 0.12858 3.48693 2.87081 3.39888 31 - - | |
7551 1.38629 1.38629 1.38629 1.38629 | |
7552 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7553 32 3.55554 0.11651 3.59965 2.91731 32 - - | |
7554 1.38629 1.38629 1.38629 1.38629 | |
7555 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7556 33 0.21326 3.19501 2.24953 3.08698 33 - - | |
7557 1.38629 1.38629 1.38629 1.38629 | |
7558 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7559 34 0.12858 3.48693 2.87081 3.39888 34 - - | |
7560 1.38629 1.38629 1.38629 1.38629 | |
7561 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7562 35 3.55554 0.11651 3.59965 2.91731 35 - - | |
7563 1.38629 1.38629 1.38629 1.38629 | |
7564 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7565 36 3.02055 3.69484 0.10609 3.61089 36 - - | |
7566 1.38629 1.38629 1.38629 1.38629 | |
7567 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7568 37 0.12858 3.48693 2.87081 3.39888 37 - - | |
7569 1.38629 1.38629 1.38629 1.38629 | |
7570 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7571 38 3.19761 2.66431 3.24155 0.16206 38 - - | |
7572 1.38629 1.38629 1.38629 1.38629 | |
7573 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7574 39 3.02055 3.69484 0.10609 3.61089 39 - - | |
7575 1.38629 1.38629 1.38629 1.38629 | |
7576 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7577 40 0.12858 3.48693 2.87081 3.39888 40 - - | |
7578 1.38629 1.38629 1.38629 1.38629 | |
7579 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7580 41 0.12858 3.48693 2.87081 3.39888 41 - - | |
7581 1.38629 1.38629 1.38629 1.38629 | |
7582 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7583 42 3.02055 3.69484 0.10609 3.61089 42 - - | |
7584 1.38629 1.38629 1.38629 1.38629 | |
7585 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7586 43 3.02055 3.69484 0.10609 3.61089 43 - - | |
7587 1.38629 1.38629 1.38629 1.38629 | |
7588 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7589 44 0.12858 3.48693 2.87081 3.39888 44 - - | |
7590 1.38629 1.38629 1.38629 1.38629 | |
7591 0.03463 4.07342 4.07342 1.46634 0.26236 1.09861 0.40547 | |
7592 45 3.55554 0.11651 3.59965 2.91731 45 - - | |
7593 1.38629 1.38629 1.38629 1.38629 | |
7594 0.01747 4.05626 * 1.46634 0.26236 0.00000 * | |
7595 // | |
7596 HMMER3/b [3.0 | March 2010] | |
7597 NAME 2_5.8_Alveolata_58S_start_elevenb_long | |
7598 LENG 45 | |
7599 ALPH DNA | |
7600 RF no | |
7601 CS no | |
7602 MAP yes | |
7603 DATE Wed Feb 29 13:27:41 2012 | |
7604 NSEQ 5 | |
7605 EFFN 3.208008 | |
7606 CKSUM 4067533443 | |
7607 STATS LOCAL MSV -8.1074 0.71934 | |
7608 STATS LOCAL VITERBI -7.6996 0.71934 | |
7609 STATS LOCAL FORWARD -3.9608 0.71934 | |
7610 HMM A C G T | |
7611 m->m m->i m->d i->m i->i d->m d->d | |
7612 COMPO 1.27246 1.46892 1.31219 1.51207 | |
7613 1.38629 1.38629 1.38629 1.38629 | |
7614 0.03768 3.99047 3.99047 1.46634 0.26236 0.00000 * | |
7615 1 0.14694 3.34284 2.77755 3.24098 1 - - | |
7616 1.38629 1.38629 1.38629 1.38629 | |
7617 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7618 2 0.14694 3.34284 2.77755 3.24098 2 - - | |
7619 1.38629 1.38629 1.38629 1.38629 | |
7620 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7621 3 0.14694 3.34284 2.77755 3.24098 3 - - | |
7622 1.38629 1.38629 1.38629 1.38629 | |
7623 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7624 4 3.05099 2.57118 3.10057 0.18486 4 - - | |
7625 1.38629 1.38629 1.38629 1.38629 | |
7626 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7627 5 3.05099 2.57118 3.10057 0.18486 5 - - | |
7628 1.38629 1.38629 1.38629 1.38629 | |
7629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7630 6 3.05099 2.57118 3.10057 0.18486 6 - - | |
7631 1.38629 1.38629 1.38629 1.38629 | |
7632 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7633 7 3.05099 2.57118 3.10057 0.18486 7 - - | |
7634 1.38629 1.38629 1.38629 1.38629 | |
7635 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7636 8 3.38993 0.13548 3.44120 2.79746 8 - - | |
7637 1.38629 1.38629 1.38629 1.38629 | |
7638 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7639 9 0.14694 3.34284 2.77755 3.24098 9 - - | |
7640 1.38629 1.38629 1.38629 1.38629 | |
7641 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7642 10 2.92124 3.54964 0.12142 3.45039 10 - - | |
7643 1.38629 1.38629 1.38629 1.38629 | |
7644 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7645 11 3.38993 0.13548 3.44120 2.79746 11 - - | |
7646 1.38629 1.38629 1.38629 1.38629 | |
7647 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7648 12 2.92124 3.54964 0.12142 3.45039 12 - - | |
7649 1.38629 1.38629 1.38629 1.38629 | |
7650 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7651 13 2.92124 3.54964 0.12142 3.45039 13 - - | |
7652 1.38629 1.38629 1.38629 1.38629 | |
7653 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7654 14 3.05099 2.57118 3.10057 0.18486 14 - - | |
7655 1.38629 1.38629 1.38629 1.38629 | |
7656 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7657 15 2.92124 3.54964 0.12142 3.45039 15 - - | |
7658 1.38629 1.38629 1.38629 1.38629 | |
7659 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7660 16 2.92124 3.54964 0.12142 3.45039 16 - - | |
7661 1.38629 1.38629 1.38629 1.38629 | |
7662 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7663 17 0.14694 3.34284 2.77755 3.24098 17 - - | |
7664 1.38629 1.38629 1.38629 1.38629 | |
7665 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7666 18 3.05099 2.57118 3.10057 0.18486 18 - - | |
7667 1.38629 1.38629 1.38629 1.38629 | |
7668 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7669 19 2.92124 3.54964 0.12142 3.45039 19 - - | |
7670 1.38629 1.38629 1.38629 1.38629 | |
7671 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7672 20 3.05099 2.57118 3.10057 0.18486 20 - - | |
7673 1.38629 1.38629 1.38629 1.38629 | |
7674 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7675 21 3.38993 0.13548 3.44120 2.79746 21 - - | |
7676 1.38629 1.38629 1.38629 1.38629 | |
7677 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7678 22 3.05099 2.57118 3.10057 0.18486 22 - - | |
7679 1.38629 1.38629 1.38629 1.38629 | |
7680 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7681 23 3.38993 0.13548 3.44120 2.79746 23 - - | |
7682 1.38629 1.38629 1.38629 1.38629 | |
7683 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7684 24 2.92124 3.54964 0.12142 3.45039 24 - - | |
7685 1.38629 1.38629 1.38629 1.38629 | |
7686 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7687 25 2.92124 3.54964 0.12142 3.45039 25 - - | |
7688 1.38629 1.38629 1.38629 1.38629 | |
7689 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7690 26 3.38993 0.13548 3.44120 2.79746 26 - - | |
7691 1.38629 1.38629 1.38629 1.38629 | |
7692 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7693 27 3.05099 2.57118 3.10057 0.18486 27 - - | |
7694 1.38629 1.38629 1.38629 1.38629 | |
7695 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7696 28 3.38993 0.13548 3.44120 2.79746 28 - - | |
7697 1.38629 1.38629 1.38629 1.38629 | |
7698 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7699 29 0.14694 3.34284 2.77755 3.24098 29 - - | |
7700 1.38629 1.38629 1.38629 1.38629 | |
7701 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7702 30 3.38993 0.13548 3.44120 2.79746 30 - - | |
7703 1.38629 1.38629 1.38629 1.38629 | |
7704 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7705 31 0.14694 3.34284 2.77755 3.24098 31 - - | |
7706 1.38629 1.38629 1.38629 1.38629 | |
7707 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7708 32 3.38993 0.13548 3.44120 2.79746 32 - - | |
7709 1.38629 1.38629 1.38629 1.38629 | |
7710 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7711 33 0.14694 3.34284 2.77755 3.24098 33 - - | |
7712 1.38629 1.38629 1.38629 1.38629 | |
7713 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7714 34 0.14694 3.34284 2.77755 3.24098 34 - - | |
7715 1.38629 1.38629 1.38629 1.38629 | |
7716 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7717 35 3.38993 0.13548 3.44120 2.79746 35 - - | |
7718 1.38629 1.38629 1.38629 1.38629 | |
7719 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7720 36 2.92124 3.54964 0.12142 3.45039 36 - - | |
7721 1.38629 1.38629 1.38629 1.38629 | |
7722 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7723 37 0.14694 3.34284 2.77755 3.24098 37 - - | |
7724 1.38629 1.38629 1.38629 1.38629 | |
7725 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7726 38 3.05099 2.57118 3.10057 0.18486 38 - - | |
7727 1.38629 1.38629 1.38629 1.38629 | |
7728 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7729 39 2.92124 3.54964 0.12142 3.45039 39 - - | |
7730 1.38629 1.38629 1.38629 1.38629 | |
7731 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7732 40 0.14694 3.34284 2.77755 3.24098 40 - - | |
7733 1.38629 1.38629 1.38629 1.38629 | |
7734 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7735 41 0.14694 3.34284 2.77755 3.24098 41 - - | |
7736 1.38629 1.38629 1.38629 1.38629 | |
7737 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7738 42 2.92124 3.54964 0.12142 3.45039 42 - - | |
7739 1.38629 1.38629 1.38629 1.38629 | |
7740 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7741 43 2.92124 3.54964 0.12142 3.45039 43 - - | |
7742 1.38629 1.38629 1.38629 1.38629 | |
7743 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7744 44 0.14694 3.34284 2.77755 3.24098 44 - - | |
7745 1.38629 1.38629 1.38629 1.38629 | |
7746 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 | |
7747 45 3.38993 0.13548 3.44120 2.79746 45 - - | |
7748 1.38629 1.38629 1.38629 1.38629 | |
7749 0.01902 3.97180 * 1.46634 0.26236 0.00000 * | |
7750 // | |
7751 HMMER3/b [3.0 | March 2010] | |
7752 NAME 2_5.8_Alveolata_58S_start_elevenc_long | |
7753 LENG 45 | |
7754 ALPH DNA | |
7755 RF no | |
7756 CS no | |
7757 MAP yes | |
7758 DATE Wed Feb 29 13:27:45 2012 | |
7759 NSEQ 20 | |
7760 EFFN 3.481445 | |
7761 CKSUM 987744611 | |
7762 STATS LOCAL MSV -7.5848 0.71932 | |
7763 STATS LOCAL VITERBI -7.4852 0.71932 | |
7764 STATS LOCAL FORWARD -4.0632 0.71932 | |
7765 HMM A C G T | |
7766 m->m m->i m->d i->m i->i d->m d->d | |
7767 COMPO 1.25409 1.53980 1.40804 1.36407 | |
7768 1.38629 1.38629 1.38629 1.38629 | |
7769 0.03584 4.03979 4.03979 1.46634 0.26236 0.00000 * | |
7770 1 3.13887 2.62707 3.18509 0.17078 1 - - | |
7771 1.38629 1.38629 1.38629 1.38629 | |
7772 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7773 2 0.13553 3.42977 2.83398 3.33617 2 - - | |
7774 1.38629 1.38629 1.38629 1.38629 | |
7775 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7776 3 3.13887 2.62707 3.18509 0.17078 3 - - | |
7777 1.38629 1.38629 1.38629 1.38629 | |
7778 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7779 4 3.49007 0.12362 3.53707 2.87028 4 - - | |
7780 1.38629 1.38629 1.38629 1.38629 | |
7781 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7782 5 3.13887 2.62707 3.18509 0.17078 5 - - | |
7783 1.38629 1.38629 1.38629 1.38629 | |
7784 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7785 6 3.13887 2.62707 3.18509 0.17078 6 - - | |
7786 1.38629 1.38629 1.38629 1.38629 | |
7787 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7788 7 3.13887 2.62707 3.18509 0.17078 7 - - | |
7789 1.38629 1.38629 1.38629 1.38629 | |
7790 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7791 8 3.49007 0.12362 3.53707 2.87028 8 - - | |
7792 1.38629 1.38629 1.38629 1.38629 | |
7793 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7794 9 0.13553 3.42977 2.83398 3.33617 9 - - | |
7795 1.38629 1.38629 1.38629 1.38629 | |
7796 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7797 10 2.98175 3.63775 0.11183 3.54767 10 - - | |
7798 1.38629 1.38629 1.38629 1.38629 | |
7799 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7800 11 3.49007 0.12362 3.53707 2.87028 11 - - | |
7801 1.38629 1.38629 1.38629 1.38629 | |
7802 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7803 12 2.98175 3.63775 0.11183 3.54767 12 - - | |
7804 1.38629 1.38629 1.38629 1.38629 | |
7805 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7806 13 0.13553 3.42977 2.83398 3.33617 13 - - | |
7807 1.38629 1.38629 1.38629 1.38629 | |
7808 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7809 14 3.13887 2.62707 3.18509 0.17078 14 - - | |
7810 1.38629 1.38629 1.38629 1.38629 | |
7811 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7812 15 2.98175 3.63775 0.11183 3.54767 15 - - | |
7813 1.38629 1.38629 1.38629 1.38629 | |
7814 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7815 16 2.98175 3.63775 0.11183 3.54767 16 - - | |
7816 1.38629 1.38629 1.38629 1.38629 | |
7817 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7818 17 0.13553 3.42977 2.83398 3.33617 17 - - | |
7819 1.38629 1.38629 1.38629 1.38629 | |
7820 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7821 18 3.13887 2.62707 3.18509 0.17078 18 - - | |
7822 1.38629 1.38629 1.38629 1.38629 | |
7823 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7824 19 2.98175 3.63775 0.11183 3.54767 19 - - | |
7825 1.38629 1.38629 1.38629 1.38629 | |
7826 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7827 20 0.98772 2.55500 0.77629 2.41045 20 - - | |
7828 1.38629 1.38629 1.38629 1.38629 | |
7829 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7830 21 3.49007 0.12362 3.53707 2.87028 21 - - | |
7831 1.38629 1.38629 1.38629 1.38629 | |
7832 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7833 22 3.13887 2.62707 3.18509 0.17078 22 - - | |
7834 1.38629 1.38629 1.38629 1.38629 | |
7835 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7836 23 3.49007 0.12362 3.53707 2.87028 23 - - | |
7837 1.38629 1.38629 1.38629 1.38629 | |
7838 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7839 24 2.98175 3.63775 0.11183 3.54767 24 - - | |
7840 1.38629 1.38629 1.38629 1.38629 | |
7841 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7842 25 2.98175 3.63775 0.11183 3.54767 25 - - | |
7843 1.38629 1.38629 1.38629 1.38629 | |
7844 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7845 26 0.13553 3.42977 2.83398 3.33617 26 - - | |
7846 1.38629 1.38629 1.38629 1.38629 | |
7847 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7848 27 3.13887 2.62707 3.18509 0.17078 27 - - | |
7849 1.38629 1.38629 1.38629 1.38629 | |
7850 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7851 28 3.49007 0.12362 3.53707 2.87028 28 - - | |
7852 1.38629 1.38629 1.38629 1.38629 | |
7853 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7854 29 3.13887 2.62707 3.18509 0.17078 29 - - | |
7855 1.38629 1.38629 1.38629 1.38629 | |
7856 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7857 30 3.49007 0.12362 3.53707 2.87028 30 - - | |
7858 1.38629 1.38629 1.38629 1.38629 | |
7859 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7860 31 0.13553 3.42977 2.83398 3.33617 31 - - | |
7861 1.38629 1.38629 1.38629 1.38629 | |
7862 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7863 32 3.13887 2.62707 3.18509 0.17078 32 - - | |
7864 1.38629 1.38629 1.38629 1.38629 | |
7865 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7866 33 0.13553 3.42977 2.83398 3.33617 33 - - | |
7867 1.38629 1.38629 1.38629 1.38629 | |
7868 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7869 34 0.13553 3.42977 2.83398 3.33617 34 - - | |
7870 1.38629 1.38629 1.38629 1.38629 | |
7871 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7872 35 3.49007 0.12362 3.53707 2.87028 35 - - | |
7873 1.38629 1.38629 1.38629 1.38629 | |
7874 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7875 36 2.98175 3.63775 0.11183 3.54767 36 - - | |
7876 1.38629 1.38629 1.38629 1.38629 | |
7877 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7878 37 0.13553 3.42977 2.83398 3.33617 37 - - | |
7879 1.38629 1.38629 1.38629 1.38629 | |
7880 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7881 38 3.13887 2.62707 3.18509 0.17078 38 - - | |
7882 1.38629 1.38629 1.38629 1.38629 | |
7883 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7884 39 2.98175 3.63775 0.11183 3.54767 39 - - | |
7885 1.38629 1.38629 1.38629 1.38629 | |
7886 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7887 40 0.13553 3.42977 2.83398 3.33617 40 - - | |
7888 1.38629 1.38629 1.38629 1.38629 | |
7889 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7890 41 0.13553 3.42977 2.83398 3.33617 41 - - | |
7891 1.38629 1.38629 1.38629 1.38629 | |
7892 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7893 42 2.98175 3.63775 0.11183 3.54767 42 - - | |
7894 1.38629 1.38629 1.38629 1.38629 | |
7895 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7896 43 0.13553 3.42977 2.83398 3.33617 43 - - | |
7897 1.38629 1.38629 1.38629 1.38629 | |
7898 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7899 44 0.22376 3.13411 2.22332 3.02203 44 - - | |
7900 1.38629 1.38629 1.38629 1.38629 | |
7901 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 | |
7902 45 3.06247 0.19963 2.76820 2.63920 45 - - | |
7903 1.38629 1.38629 1.38629 1.38629 | |
7904 0.01808 4.02203 * 1.46634 0.26236 0.00000 * | |
7905 // | |
7906 HMMER3/b [3.0 | March 2010] | |
7907 NAME 2_5.8_Alveolata_58S_start_five_long | |
7908 LENG 45 | |
7909 ALPH DNA | |
7910 RF no | |
7911 CS no | |
7912 MAP yes | |
7913 DATE Wed Feb 29 13:26:27 2012 | |
7914 NSEQ 2 | |
7915 EFFN 2.000000 | |
7916 CKSUM 3440808981 | |
7917 STATS LOCAL MSV -7.7336 0.72845 | |
7918 STATS LOCAL VITERBI -8.5172 0.72845 | |
7919 STATS LOCAL FORWARD -3.3604 0.72845 | |
7920 HMM A C G T | |
7921 m->m m->i m->d i->m i->i d->m d->d | |
7922 COMPO 1.33246 1.71713 1.20095 1.36382 | |
7923 1.38629 1.38629 1.38629 1.38629 | |
7924 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
7925 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
7926 1.38629 1.38629 1.38629 1.38629 | |
7927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7928 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
7929 1.38629 1.38629 1.38629 1.38629 | |
7930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7931 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
7932 1.38629 1.38629 1.38629 1.38629 | |
7933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7934 4 2.53331 3.02441 0.20344 2.88069 4 - - | |
7935 1.38629 1.38629 1.38629 1.38629 | |
7936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7937 5 2.81865 0.23582 2.88868 2.35662 5 - - | |
7938 1.38629 1.38629 1.38629 1.38629 | |
7939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7940 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
7941 1.38629 1.38629 1.38629 1.38629 | |
7942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7943 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
7944 1.38629 1.38629 1.38629 1.38629 | |
7945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7946 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
7947 1.38629 1.38629 1.38629 1.38629 | |
7948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7949 9 0.23862 2.84929 2.43386 2.70756 9 - - | |
7950 1.38629 1.38629 1.38629 1.38629 | |
7951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7952 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
7953 1.38629 1.38629 1.38629 1.38629 | |
7954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7955 11 2.57915 2.25909 2.64442 0.28946 11 - - | |
7956 1.38629 1.38629 1.38629 1.38629 | |
7957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7958 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
7959 1.38629 1.38629 1.38629 1.38629 | |
7960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7961 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
7962 1.38629 1.38629 1.38629 1.38629 | |
7963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7964 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
7965 1.38629 1.38629 1.38629 1.38629 | |
7966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7967 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
7968 1.38629 1.38629 1.38629 1.38629 | |
7969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7970 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
7971 1.38629 1.38629 1.38629 1.38629 | |
7972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7973 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
7974 1.38629 1.38629 1.38629 1.38629 | |
7975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7976 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
7977 1.38629 1.38629 1.38629 1.38629 | |
7978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7979 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
7980 1.38629 1.38629 1.38629 1.38629 | |
7981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7982 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
7983 1.38629 1.38629 1.38629 1.38629 | |
7984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7985 21 2.57915 2.25909 2.64442 0.28946 21 - - | |
7986 1.38629 1.38629 1.38629 1.38629 | |
7987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7988 22 2.57915 2.25909 2.64442 0.28946 22 - - | |
7989 1.38629 1.38629 1.38629 1.38629 | |
7990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7991 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
7992 1.38629 1.38629 1.38629 1.38629 | |
7993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7994 24 2.53331 3.02441 0.20344 2.88069 24 - - | |
7995 1.38629 1.38629 1.38629 1.38629 | |
7996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
7997 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
7998 1.38629 1.38629 1.38629 1.38629 | |
7999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8000 26 2.57915 2.25909 2.64442 0.28946 26 - - | |
8001 1.38629 1.38629 1.38629 1.38629 | |
8002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8003 27 2.57915 2.25909 2.64442 0.28946 27 - - | |
8004 1.38629 1.38629 1.38629 1.38629 | |
8005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8006 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
8007 1.38629 1.38629 1.38629 1.38629 | |
8008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8009 29 0.23862 2.84929 2.43386 2.70756 29 - - | |
8010 1.38629 1.38629 1.38629 1.38629 | |
8011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8012 30 0.23862 2.84929 2.43386 2.70756 30 - - | |
8013 1.38629 1.38629 1.38629 1.38629 | |
8014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8015 31 0.23862 2.84929 2.43386 2.70756 31 - - | |
8016 1.38629 1.38629 1.38629 1.38629 | |
8017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8018 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
8019 1.38629 1.38629 1.38629 1.38629 | |
8020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8021 33 0.23862 2.84929 2.43386 2.70756 33 - - | |
8022 1.38629 1.38629 1.38629 1.38629 | |
8023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8024 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
8025 1.38629 1.38629 1.38629 1.38629 | |
8026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8027 35 2.15554 1.00938 2.23102 0.88601 35 - - | |
8028 1.38629 1.38629 1.38629 1.38629 | |
8029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8030 36 2.53331 3.02441 0.20344 2.88069 36 - - | |
8031 1.38629 1.38629 1.38629 1.38629 | |
8032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8033 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
8034 1.38629 1.38629 1.38629 1.38629 | |
8035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8036 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
8037 1.38629 1.38629 1.38629 1.38629 | |
8038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8039 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
8040 1.38629 1.38629 1.38629 1.38629 | |
8041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8042 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
8043 1.38629 1.38629 1.38629 1.38629 | |
8044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8045 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
8046 1.38629 1.38629 1.38629 1.38629 | |
8047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8048 42 2.53331 3.02441 0.20344 2.88069 42 - - | |
8049 1.38629 1.38629 1.38629 1.38629 | |
8050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8051 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
8052 1.38629 1.38629 1.38629 1.38629 | |
8053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8054 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
8055 1.38629 1.38629 1.38629 1.38629 | |
8056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8057 45 2.57915 2.25909 2.64442 0.28946 45 - - | |
8058 1.38629 1.38629 1.38629 1.38629 | |
8059 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
8060 // | |
8061 HMMER3/b [3.0 | March 2010] | |
8062 NAME 2_5.8_Alveolata_58S_start_foura_long | |
8063 LENG 45 | |
8064 ALPH DNA | |
8065 RF no | |
8066 CS no | |
8067 MAP yes | |
8068 DATE Wed Feb 29 13:26:14 2012 | |
8069 NSEQ 2 | |
8070 EFFN 2.000000 | |
8071 CKSUM 3441996736 | |
8072 STATS LOCAL MSV -7.3600 0.72755 | |
8073 STATS LOCAL VITERBI -8.3191 0.72755 | |
8074 STATS LOCAL FORWARD -3.0189 0.72755 | |
8075 HMM A C G T | |
8076 m->m m->i m->d i->m i->i d->m d->d | |
8077 COMPO 1.28872 1.35377 1.31697 1.61865 | |
8078 1.38629 1.38629 1.38629 1.38629 | |
8079 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
8080 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
8081 1.38629 1.38629 1.38629 1.38629 | |
8082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8083 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
8084 1.38629 1.38629 1.38629 1.38629 | |
8085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8086 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
8087 1.38629 1.38629 1.38629 1.38629 | |
8088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8089 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
8090 1.38629 1.38629 1.38629 1.38629 | |
8091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8092 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
8093 1.38629 1.38629 1.38629 1.38629 | |
8094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8095 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
8096 1.38629 1.38629 1.38629 1.38629 | |
8097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8098 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
8099 1.38629 1.38629 1.38629 1.38629 | |
8100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8101 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
8102 1.38629 1.38629 1.38629 1.38629 | |
8103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8104 9 0.23862 2.84929 2.43386 2.70756 9 - - | |
8105 1.38629 1.38629 1.38629 1.38629 | |
8106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8107 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
8108 1.38629 1.38629 1.38629 1.38629 | |
8109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8110 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
8111 1.38629 1.38629 1.38629 1.38629 | |
8112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8113 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
8114 1.38629 1.38629 1.38629 1.38629 | |
8115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8116 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
8117 1.38629 1.38629 1.38629 1.38629 | |
8118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8119 14 2.81865 0.23582 2.88868 2.35662 14 - - | |
8120 1.38629 1.38629 1.38629 1.38629 | |
8121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8122 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
8123 1.38629 1.38629 1.38629 1.38629 | |
8124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8125 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
8126 1.38629 1.38629 1.38629 1.38629 | |
8127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8128 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
8129 1.38629 1.38629 1.38629 1.38629 | |
8130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8131 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
8132 1.38629 1.38629 1.38629 1.38629 | |
8133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8134 19 0.23862 2.84929 2.43386 2.70756 19 - - | |
8135 1.38629 1.38629 1.38629 1.38629 | |
8136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8137 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
8138 1.38629 1.38629 1.38629 1.38629 | |
8139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8140 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
8141 1.38629 1.38629 1.38629 1.38629 | |
8142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8143 22 2.57915 2.25909 2.64442 0.28946 22 - - | |
8144 1.38629 1.38629 1.38629 1.38629 | |
8145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8146 23 2.81865 0.23582 2.88868 2.35662 23 - - | |
8147 1.38629 1.38629 1.38629 1.38629 | |
8148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8149 24 2.53331 3.02441 0.20344 2.88069 24 - - | |
8150 1.38629 1.38629 1.38629 1.38629 | |
8151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8152 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
8153 1.38629 1.38629 1.38629 1.38629 | |
8154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8155 26 2.81865 0.23582 2.88868 2.35662 26 - - | |
8156 1.38629 1.38629 1.38629 1.38629 | |
8157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8158 27 2.57915 2.25909 2.64442 0.28946 27 - - | |
8159 1.38629 1.38629 1.38629 1.38629 | |
8160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8161 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
8162 1.38629 1.38629 1.38629 1.38629 | |
8163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8164 29 0.23862 2.84929 2.43386 2.70756 29 - - | |
8165 1.38629 1.38629 1.38629 1.38629 | |
8166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8167 30 0.23862 2.84929 2.43386 2.70756 30 - - | |
8168 1.38629 1.38629 1.38629 1.38629 | |
8169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8170 31 2.53331 3.02441 0.20344 2.88069 31 - - | |
8171 1.38629 1.38629 1.38629 1.38629 | |
8172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8173 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
8174 1.38629 1.38629 1.38629 1.38629 | |
8175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8176 33 0.23862 2.84929 2.43386 2.70756 33 - - | |
8177 1.38629 1.38629 1.38629 1.38629 | |
8178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8179 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
8180 1.38629 1.38629 1.38629 1.38629 | |
8181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8182 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
8183 1.38629 1.38629 1.38629 1.38629 | |
8184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8185 36 2.53331 3.02441 0.20344 2.88069 36 - - | |
8186 1.38629 1.38629 1.38629 1.38629 | |
8187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8188 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
8189 1.38629 1.38629 1.38629 1.38629 | |
8190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8191 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
8192 1.38629 1.38629 1.38629 1.38629 | |
8193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8194 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
8195 1.38629 1.38629 1.38629 1.38629 | |
8196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8197 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
8198 1.38629 1.38629 1.38629 1.38629 | |
8199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8200 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
8201 1.38629 1.38629 1.38629 1.38629 | |
8202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8203 42 2.53331 3.02441 0.20344 2.88069 42 - - | |
8204 1.38629 1.38629 1.38629 1.38629 | |
8205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8206 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
8207 1.38629 1.38629 1.38629 1.38629 | |
8208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8209 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
8210 1.38629 1.38629 1.38629 1.38629 | |
8211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8212 45 2.81865 0.23582 2.88868 2.35662 45 - - | |
8213 1.38629 1.38629 1.38629 1.38629 | |
8214 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
8215 // | |
8216 HMMER3/b [3.0 | March 2010] | |
8217 NAME 2_5.8_Alveolata_58S_start_fourb_long | |
8218 LENG 45 | |
8219 ALPH DNA | |
8220 RF no | |
8221 CS no | |
8222 MAP yes | |
8223 DATE Wed Feb 29 13:26:19 2012 | |
8224 NSEQ 2 | |
8225 EFFN 2.000000 | |
8226 CKSUM 909930947 | |
8227 STATS LOCAL MSV -7.5897 0.72766 | |
8228 STATS LOCAL VITERBI -8.2123 0.72766 | |
8229 STATS LOCAL FORWARD -3.0207 0.72766 | |
8230 HMM A C G T | |
8231 m->m m->i m->d i->m i->i d->m d->d | |
8232 COMPO 1.34189 1.34952 1.31824 1.55270 | |
8233 1.38629 1.38629 1.38629 1.38629 | |
8234 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
8235 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
8236 1.38629 1.38629 1.38629 1.38629 | |
8237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8238 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
8239 1.38629 1.38629 1.38629 1.38629 | |
8240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8241 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
8242 1.38629 1.38629 1.38629 1.38629 | |
8243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8244 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
8245 1.38629 1.38629 1.38629 1.38629 | |
8246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8247 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
8248 1.38629 1.38629 1.38629 1.38629 | |
8249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8250 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
8251 1.38629 1.38629 1.38629 1.38629 | |
8252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8253 7 2.57915 2.25909 2.64442 0.28946 7 - - | |
8254 1.38629 1.38629 1.38629 1.38629 | |
8255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8256 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
8257 1.38629 1.38629 1.38629 1.38629 | |
8258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8259 9 0.23862 2.84929 2.43386 2.70756 9 - - | |
8260 1.38629 1.38629 1.38629 1.38629 | |
8261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8262 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
8263 1.38629 1.38629 1.38629 1.38629 | |
8264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8265 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
8266 1.38629 1.38629 1.38629 1.38629 | |
8267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8268 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
8269 1.38629 1.38629 1.38629 1.38629 | |
8270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8271 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
8272 1.38629 1.38629 1.38629 1.38629 | |
8273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8274 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
8275 1.38629 1.38629 1.38629 1.38629 | |
8276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8277 15 2.81865 0.23582 2.88868 2.35662 15 - - | |
8278 1.38629 1.38629 1.38629 1.38629 | |
8279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8280 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
8281 1.38629 1.38629 1.38629 1.38629 | |
8282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8283 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
8284 1.38629 1.38629 1.38629 1.38629 | |
8285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8286 18 2.57915 2.25909 2.64442 0.28946 18 - - | |
8287 1.38629 1.38629 1.38629 1.38629 | |
8288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8289 19 2.53331 3.02441 0.20344 2.88069 19 - - | |
8290 1.38629 1.38629 1.38629 1.38629 | |
8291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8292 20 2.57915 2.25909 2.64442 0.28946 20 - - | |
8293 1.38629 1.38629 1.38629 1.38629 | |
8294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8295 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
8296 1.38629 1.38629 1.38629 1.38629 | |
8297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8298 22 2.57915 2.25909 2.64442 0.28946 22 - - | |
8299 1.38629 1.38629 1.38629 1.38629 | |
8300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8301 23 2.81865 0.23582 2.88868 2.35662 23 - - | |
8302 1.38629 1.38629 1.38629 1.38629 | |
8303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8304 24 2.53331 3.02441 0.20344 2.88069 24 - - | |
8305 1.38629 1.38629 1.38629 1.38629 | |
8306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8307 25 2.53331 3.02441 0.20344 2.88069 25 - - | |
8308 1.38629 1.38629 1.38629 1.38629 | |
8309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8310 26 2.81865 0.23582 2.88868 2.35662 26 - - | |
8311 1.38629 1.38629 1.38629 1.38629 | |
8312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8313 27 2.57915 2.25909 2.64442 0.28946 27 - - | |
8314 1.38629 1.38629 1.38629 1.38629 | |
8315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8316 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
8317 1.38629 1.38629 1.38629 1.38629 | |
8318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8319 29 2.53331 3.02441 0.20344 2.88069 29 - - | |
8320 1.38629 1.38629 1.38629 1.38629 | |
8321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8322 30 0.23862 2.84929 2.43386 2.70756 30 - - | |
8323 1.38629 1.38629 1.38629 1.38629 | |
8324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8325 31 0.23862 2.84929 2.43386 2.70756 31 - - | |
8326 1.38629 1.38629 1.38629 1.38629 | |
8327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8328 32 2.81865 0.23582 2.88868 2.35662 32 - - | |
8329 1.38629 1.38629 1.38629 1.38629 | |
8330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8331 33 0.23862 2.84929 2.43386 2.70756 33 - - | |
8332 1.38629 1.38629 1.38629 1.38629 | |
8333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8334 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
8335 1.38629 1.38629 1.38629 1.38629 | |
8336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8337 35 2.81865 0.23582 2.88868 2.35662 35 - - | |
8338 1.38629 1.38629 1.38629 1.38629 | |
8339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8340 36 2.53331 3.02441 0.20344 2.88069 36 - - | |
8341 1.38629 1.38629 1.38629 1.38629 | |
8342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8343 37 0.23862 2.84929 2.43386 2.70756 37 - - | |
8344 1.38629 1.38629 1.38629 1.38629 | |
8345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8346 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
8347 1.38629 1.38629 1.38629 1.38629 | |
8348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8349 39 2.53331 3.02441 0.20344 2.88069 39 - - | |
8350 1.38629 1.38629 1.38629 1.38629 | |
8351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8352 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
8353 1.38629 1.38629 1.38629 1.38629 | |
8354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8355 41 0.23862 2.84929 2.43386 2.70756 41 - - | |
8356 1.38629 1.38629 1.38629 1.38629 | |
8357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8358 42 2.53331 3.02441 0.20344 2.88069 42 - - | |
8359 1.38629 1.38629 1.38629 1.38629 | |
8360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8361 43 2.53331 3.02441 0.20344 2.88069 43 - - | |
8362 1.38629 1.38629 1.38629 1.38629 | |
8363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8364 44 2.53331 3.02441 0.20344 2.88069 44 - - | |
8365 1.38629 1.38629 1.38629 1.38629 | |
8366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
8367 45 2.81865 0.23582 2.88868 2.35662 45 - - | |
8368 1.38629 1.38629 1.38629 1.38629 | |
8369 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
8370 // | |
8371 HMMER3/b [3.0 | March 2010] | |
8372 NAME 2_5.8_Alveolata_58S_start_fourteen_long | |
8373 LENG 45 | |
8374 ALPH DNA | |
8375 RF no | |
8376 CS no | |
8377 MAP yes | |
8378 DATE Wed Feb 29 13:28:14 2012 | |
8379 NSEQ 3 | |
8380 EFFN 3.000000 | |
8381 CKSUM 3318248282 | |
8382 STATS LOCAL MSV -7.9911 0.72105 | |
8383 STATS LOCAL VITERBI -7.7365 0.72105 | |
8384 STATS LOCAL FORWARD -4.0158 0.72105 | |
8385 HMM A C G T | |
8386 m->m m->i m->d i->m i->i d->m d->d | |
8387 COMPO 1.21240 1.73126 1.43760 1.24493 | |
8388 1.38629 1.38629 1.38629 1.38629 | |
8389 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
8390 1 0.15719 3.27118 2.73043 3.16274 1 - - | |
8391 1.38629 1.38629 1.38629 1.38629 | |
8392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8393 2 2.43223 0.62271 2.50508 1.22417 2 - - | |
8394 1.38629 1.38629 1.38629 1.38629 | |
8395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8396 3 0.15719 3.27118 2.73043 3.16274 3 - - | |
8397 1.38629 1.38629 1.38629 1.38629 | |
8398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8399 4 3.30705 0.14631 3.36166 2.73626 4 - - | |
8400 1.38629 1.38629 1.38629 1.38629 | |
8401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8402 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
8403 1.38629 1.38629 1.38629 1.38629 | |
8404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8405 6 2.97980 2.52563 3.03204 0.19727 6 - - | |
8406 1.38629 1.38629 1.38629 1.38629 | |
8407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8408 7 2.97980 2.52563 3.03204 0.19727 7 - - | |
8409 1.38629 1.38629 1.38629 1.38629 | |
8410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8411 8 0.15719 3.27118 2.73043 3.16274 8 - - | |
8412 1.38629 1.38629 1.38629 1.38629 | |
8413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8414 9 0.15719 3.27118 2.73043 3.16274 9 - - | |
8415 1.38629 1.38629 1.38629 1.38629 | |
8416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8417 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
8418 1.38629 1.38629 1.38629 1.38629 | |
8419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8420 11 2.97980 2.52563 3.03204 0.19727 11 - - | |
8421 1.38629 1.38629 1.38629 1.38629 | |
8422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8423 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
8424 1.38629 1.38629 1.38629 1.38629 | |
8425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8426 13 0.15719 3.27118 2.73043 3.16274 13 - - | |
8427 1.38629 1.38629 1.38629 1.38629 | |
8428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8429 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
8430 1.38629 1.38629 1.38629 1.38629 | |
8431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8432 15 2.86982 3.47591 0.13017 3.36931 15 - - | |
8433 1.38629 1.38629 1.38629 1.38629 | |
8434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8435 16 2.86982 3.47591 0.13017 3.36931 16 - - | |
8436 1.38629 1.38629 1.38629 1.38629 | |
8437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8438 17 0.15719 3.27118 2.73043 3.16274 17 - - | |
8439 1.38629 1.38629 1.38629 1.38629 | |
8440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8441 18 2.97980 2.52563 3.03204 0.19727 18 - - | |
8442 1.38629 1.38629 1.38629 1.38629 | |
8443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8444 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
8445 1.38629 1.38629 1.38629 1.38629 | |
8446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8447 20 2.97980 2.52563 3.03204 0.19727 20 - - | |
8448 1.38629 1.38629 1.38629 1.38629 | |
8449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8450 21 3.30705 0.14631 3.36166 2.73626 21 - - | |
8451 1.38629 1.38629 1.38629 1.38629 | |
8452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8453 22 2.97980 2.52563 3.03204 0.19727 22 - - | |
8454 1.38629 1.38629 1.38629 1.38629 | |
8455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8456 23 2.97980 2.52563 3.03204 0.19727 23 - - | |
8457 1.38629 1.38629 1.38629 1.38629 | |
8458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8459 24 2.86982 3.47591 0.13017 3.36931 24 - - | |
8460 1.38629 1.38629 1.38629 1.38629 | |
8461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8462 25 2.86982 3.47591 0.13017 3.36931 25 - - | |
8463 1.38629 1.38629 1.38629 1.38629 | |
8464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8465 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
8466 1.38629 1.38629 1.38629 1.38629 | |
8467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8468 27 2.97980 2.52563 3.03204 0.19727 27 - - | |
8469 1.38629 1.38629 1.38629 1.38629 | |
8470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8471 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
8472 1.38629 1.38629 1.38629 1.38629 | |
8473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8474 29 2.97980 2.52563 3.03204 0.19727 29 - - | |
8475 1.38629 1.38629 1.38629 1.38629 | |
8476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8477 30 3.30705 0.14631 3.36166 2.73626 30 - - | |
8478 1.38629 1.38629 1.38629 1.38629 | |
8479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8480 31 0.15719 3.27118 2.73043 3.16274 31 - - | |
8481 1.38629 1.38629 1.38629 1.38629 | |
8482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8483 32 2.97980 2.52563 3.03204 0.19727 32 - - | |
8484 1.38629 1.38629 1.38629 1.38629 | |
8485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8486 33 0.15719 3.27118 2.73043 3.16274 33 - - | |
8487 1.38629 1.38629 1.38629 1.38629 | |
8488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8489 34 0.15719 3.27118 2.73043 3.16274 34 - - | |
8490 1.38629 1.38629 1.38629 1.38629 | |
8491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8492 35 3.30705 0.14631 3.36166 2.73626 35 - - | |
8493 1.38629 1.38629 1.38629 1.38629 | |
8494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8495 36 2.86982 3.47591 0.13017 3.36931 36 - - | |
8496 1.38629 1.38629 1.38629 1.38629 | |
8497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8498 37 0.15719 3.27118 2.73043 3.16274 37 - - | |
8499 1.38629 1.38629 1.38629 1.38629 | |
8500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8501 38 2.97980 2.52563 3.03204 0.19727 38 - - | |
8502 1.38629 1.38629 1.38629 1.38629 | |
8503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8504 39 2.86982 3.47591 0.13017 3.36931 39 - - | |
8505 1.38629 1.38629 1.38629 1.38629 | |
8506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8507 40 0.15719 3.27118 2.73043 3.16274 40 - - | |
8508 1.38629 1.38629 1.38629 1.38629 | |
8509 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8510 41 0.15719 3.27118 2.73043 3.16274 41 - - | |
8511 1.38629 1.38629 1.38629 1.38629 | |
8512 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8513 42 2.86982 3.47591 0.13017 3.36931 42 - - | |
8514 1.38629 1.38629 1.38629 1.38629 | |
8515 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8516 43 2.86982 3.47591 0.13017 3.36931 43 - - | |
8517 1.38629 1.38629 1.38629 1.38629 | |
8518 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8519 44 0.15719 3.27118 2.73043 3.16274 44 - - | |
8520 1.38629 1.38629 1.38629 1.38629 | |
8521 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
8522 45 3.30705 0.14631 3.36166 2.73626 45 - - | |
8523 1.38629 1.38629 1.38629 1.38629 | |
8524 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
8525 // | |
8526 HMMER3/b [3.0 | March 2010] | |
8527 NAME 2_5.8_Alveolata_58S_start_one_long | |
8528 LENG 45 | |
8529 ALPH DNA | |
8530 RF no | |
8531 CS no | |
8532 MAP yes | |
8533 DATE Wed Feb 29 13:25:26 2012 | |
8534 NSEQ 4 | |
8535 EFFN 3.691406 | |
8536 CKSUM 2670710095 | |
8537 STATS LOCAL MSV -7.7237 0.71932 | |
8538 STATS LOCAL VITERBI -7.6214 0.71932 | |
8539 STATS LOCAL FORWARD -3.8013 0.71932 | |
8540 HMM A C G T | |
8541 m->m m->i m->d i->m i->i d->m d->d | |
8542 COMPO 1.05540 2.03553 1.56163 1.16622 | |
8543 1.38629 1.38629 1.38629 1.38629 | |
8544 0.03454 4.07608 4.07608 1.46634 0.26236 0.00000 * | |
8545 1 0.96133 2.18963 2.20654 0.92741 1 - - | |
8546 1.38629 1.38629 1.38629 1.38629 | |
8547 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8548 2 3.20221 2.66723 3.24596 0.16140 2 - - | |
8549 1.38629 1.38629 1.38629 1.38629 | |
8550 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8551 3 0.12806 3.49137 2.87366 3.40376 3 - - | |
8552 1.38629 1.38629 1.38629 1.38629 | |
8553 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8554 4 3.20221 2.66723 3.24596 0.16140 4 - - | |
8555 1.38629 1.38629 1.38629 1.38629 | |
8556 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8557 5 3.02354 3.69924 0.10566 3.61577 5 - - | |
8558 1.38629 1.38629 1.38629 1.38629 | |
8559 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8560 6 3.20221 2.66723 3.24596 0.16140 6 - - | |
8561 1.38629 1.38629 1.38629 1.38629 | |
8562 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8563 7 3.20221 2.66723 3.24596 0.16140 7 - - | |
8564 1.38629 1.38629 1.38629 1.38629 | |
8565 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8566 8 3.20221 2.66723 3.24596 0.16140 8 - - | |
8567 1.38629 1.38629 1.38629 1.38629 | |
8568 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8569 9 3.20221 2.66723 3.24596 0.16140 9 - - | |
8570 1.38629 1.38629 1.38629 1.38629 | |
8571 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8572 10 3.02354 3.69924 0.10566 3.61577 10 - - | |
8573 1.38629 1.38629 1.38629 1.38629 | |
8574 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8575 11 3.56062 0.11598 3.60449 2.92094 11 - - | |
8576 1.38629 1.38629 1.38629 1.38629 | |
8577 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8578 12 0.12806 3.49137 2.87366 3.40376 12 - - | |
8579 1.38629 1.38629 1.38629 1.38629 | |
8580 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8581 13 0.12806 3.49137 2.87366 3.40376 13 - - | |
8582 1.38629 1.38629 1.38629 1.38629 | |
8583 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8584 14 0.12806 3.49137 2.87366 3.40376 14 - - | |
8585 1.38629 1.38629 1.38629 1.38629 | |
8586 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8587 15 3.02354 3.69924 0.10566 3.61577 15 - - | |
8588 1.38629 1.38629 1.38629 1.38629 | |
8589 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8590 16 0.12806 3.49137 2.87366 3.40376 16 - - | |
8591 1.38629 1.38629 1.38629 1.38629 | |
8592 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8593 17 0.12806 3.49137 2.87366 3.40376 17 - - | |
8594 1.38629 1.38629 1.38629 1.38629 | |
8595 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8596 18 3.20221 2.66723 3.24596 0.16140 18 - - | |
8597 1.38629 1.38629 1.38629 1.38629 | |
8598 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8599 19 3.02354 3.69924 0.10566 3.61577 19 - - | |
8600 1.38629 1.38629 1.38629 1.38629 | |
8601 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8602 20 3.20221 2.66723 3.24596 0.16140 20 - - | |
8603 1.38629 1.38629 1.38629 1.38629 | |
8604 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8605 21 3.56062 0.11598 3.60449 2.92094 21 - - | |
8606 1.38629 1.38629 1.38629 1.38629 | |
8607 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8608 22 3.20221 2.66723 3.24596 0.16140 22 - - | |
8609 1.38629 1.38629 1.38629 1.38629 | |
8610 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8611 23 3.20221 2.66723 3.24596 0.16140 23 - - | |
8612 1.38629 1.38629 1.38629 1.38629 | |
8613 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8614 24 0.12806 3.49137 2.87366 3.40376 24 - - | |
8615 1.38629 1.38629 1.38629 1.38629 | |
8616 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8617 25 3.02354 3.69924 0.10566 3.61577 25 - - | |
8618 1.38629 1.38629 1.38629 1.38629 | |
8619 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8620 26 3.56062 0.11598 3.60449 2.92094 26 - - | |
8621 1.38629 1.38629 1.38629 1.38629 | |
8622 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8623 27 3.20221 2.66723 3.24596 0.16140 27 - - | |
8624 1.38629 1.38629 1.38629 1.38629 | |
8625 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8626 28 3.56062 0.11598 3.60449 2.92094 28 - - | |
8627 1.38629 1.38629 1.38629 1.38629 | |
8628 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8629 29 0.12806 3.49137 2.87366 3.40376 29 - - | |
8630 1.38629 1.38629 1.38629 1.38629 | |
8631 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8632 30 0.12806 3.49137 2.87366 3.40376 30 - - | |
8633 1.38629 1.38629 1.38629 1.38629 | |
8634 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8635 31 3.20221 2.66723 3.24596 0.16140 31 - - | |
8636 1.38629 1.38629 1.38629 1.38629 | |
8637 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8638 32 0.12806 3.49137 2.87366 3.40376 32 - - | |
8639 1.38629 1.38629 1.38629 1.38629 | |
8640 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8641 33 0.84713 2.57557 0.89799 2.43206 33 - - | |
8642 1.38629 1.38629 1.38629 1.38629 | |
8643 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8644 34 0.12806 3.49137 2.87366 3.40376 34 - - | |
8645 1.38629 1.38629 1.38629 1.38629 | |
8646 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8647 35 3.20221 2.66723 3.24596 0.16140 35 - - | |
8648 1.38629 1.38629 1.38629 1.38629 | |
8649 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8650 36 3.02354 3.69924 0.10566 3.61577 36 - - | |
8651 1.38629 1.38629 1.38629 1.38629 | |
8652 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8653 37 0.12806 3.49137 2.87366 3.40376 37 - - | |
8654 1.38629 1.38629 1.38629 1.38629 | |
8655 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8656 38 3.20221 2.66723 3.24596 0.16140 38 - - | |
8657 1.38629 1.38629 1.38629 1.38629 | |
8658 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8659 39 3.02354 3.69924 0.10566 3.61577 39 - - | |
8660 1.38629 1.38629 1.38629 1.38629 | |
8661 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8662 40 0.12806 3.49137 2.87366 3.40376 40 - - | |
8663 1.38629 1.38629 1.38629 1.38629 | |
8664 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8665 41 0.12806 3.49137 2.87366 3.40376 41 - - | |
8666 1.38629 1.38629 1.38629 1.38629 | |
8667 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8668 42 3.02354 3.69924 0.10566 3.61577 42 - - | |
8669 1.38629 1.38629 1.38629 1.38629 | |
8670 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8671 43 0.12806 3.49137 2.87366 3.40376 43 - - | |
8672 1.38629 1.38629 1.38629 1.38629 | |
8673 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8674 44 0.12806 3.49137 2.87366 3.40376 44 - - | |
8675 1.38629 1.38629 1.38629 1.38629 | |
8676 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 | |
8677 45 3.20221 2.66723 3.24596 0.16140 45 - - | |
8678 1.38629 1.38629 1.38629 1.38629 | |
8679 0.01742 4.05896 * 1.46634 0.26236 0.00000 * | |
8680 // | |
8681 HMMER3/b [3.0 | March 2010] | |
8682 NAME 2_5.8_Alveolata_58S_start_sixa_long | |
8683 LENG 45 | |
8684 ALPH DNA | |
8685 RF no | |
8686 CS no | |
8687 MAP yes | |
8688 DATE Wed Feb 29 13:26:35 2012 | |
8689 NSEQ 15 | |
8690 EFFN 3.687744 | |
8691 CKSUM 797667666 | |
8692 STATS LOCAL MSV -7.6502 0.71933 | |
8693 STATS LOCAL VITERBI -7.7243 0.71933 | |
8694 STATS LOCAL FORWARD -4.2597 0.71933 | |
8695 HMM A C G T | |
8696 m->m m->i m->d i->m i->i d->m d->d | |
8697 COMPO 1.16124 1.50955 1.53139 1.38767 | |
8698 1.38629 1.38629 1.38629 1.38629 | |
8699 0.03456 4.07546 4.07546 1.46634 0.26236 0.00000 * | |
8700 1 0.12818 3.49033 2.87299 3.40262 1 - - | |
8701 1.38629 1.38629 1.38629 1.38629 | |
8702 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8703 2 0.12818 3.49033 2.87299 3.40262 2 - - | |
8704 1.38629 1.38629 1.38629 1.38629 | |
8705 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8706 3 0.12818 3.49033 2.87299 3.40262 3 - - | |
8707 1.38629 1.38629 1.38629 1.38629 | |
8708 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8709 4 3.20113 2.66655 3.24493 0.16155 4 - - | |
8710 1.38629 1.38629 1.38629 1.38629 | |
8711 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8712 5 3.20113 2.66655 3.24493 0.16155 5 - - | |
8713 1.38629 1.38629 1.38629 1.38629 | |
8714 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8715 6 3.55943 0.11610 3.60336 2.92009 6 - - | |
8716 1.38629 1.38629 1.38629 1.38629 | |
8717 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8718 7 3.20113 2.66655 3.24493 0.16155 7 - - | |
8719 1.38629 1.38629 1.38629 1.38629 | |
8720 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8721 8 3.55943 0.11610 3.60336 2.92009 8 - - | |
8722 1.38629 1.38629 1.38629 1.38629 | |
8723 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8724 9 0.12818 3.49033 2.87299 3.40262 9 - - | |
8725 1.38629 1.38629 1.38629 1.38629 | |
8726 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8727 10 0.12818 3.49033 2.87299 3.40262 10 - - | |
8728 1.38629 1.38629 1.38629 1.38629 | |
8729 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8730 11 3.55943 0.11610 3.60336 2.92009 11 - - | |
8731 1.38629 1.38629 1.38629 1.38629 | |
8732 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8733 12 3.02284 3.69821 0.10576 3.61463 12 - - | |
8734 1.38629 1.38629 1.38629 1.38629 | |
8735 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8736 13 0.94059 2.58194 0.80594 2.43831 13 - - | |
8737 1.38629 1.38629 1.38629 1.38629 | |
8738 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8739 14 3.20113 2.66655 3.24493 0.16155 14 - - | |
8740 1.38629 1.38629 1.38629 1.38629 | |
8741 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8742 15 3.02284 3.69821 0.10576 3.61463 15 - - | |
8743 1.38629 1.38629 1.38629 1.38629 | |
8744 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8745 16 3.02284 3.69821 0.10576 3.61463 16 - - | |
8746 1.38629 1.38629 1.38629 1.38629 | |
8747 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8748 17 0.12818 3.49033 2.87299 3.40262 17 - - | |
8749 1.38629 1.38629 1.38629 1.38629 | |
8750 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8751 18 3.20113 2.66655 3.24493 0.16155 18 - - | |
8752 1.38629 1.38629 1.38629 1.38629 | |
8753 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8754 19 0.94059 2.58194 0.80594 2.43831 19 - - | |
8755 1.38629 1.38629 1.38629 1.38629 | |
8756 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8757 20 3.20113 2.66655 3.24493 0.16155 20 - - | |
8758 1.38629 1.38629 1.38629 1.38629 | |
8759 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8760 21 3.55943 0.11610 3.60336 2.92009 21 - - | |
8761 1.38629 1.38629 1.38629 1.38629 | |
8762 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8763 22 3.20113 2.66655 3.24493 0.16155 22 - - | |
8764 1.38629 1.38629 1.38629 1.38629 | |
8765 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8766 23 3.20113 2.66655 3.24493 0.16155 23 - - | |
8767 1.38629 1.38629 1.38629 1.38629 | |
8768 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8769 24 3.02284 3.69821 0.10576 3.61463 24 - - | |
8770 1.38629 1.38629 1.38629 1.38629 | |
8771 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8772 25 3.02284 3.69821 0.10576 3.61463 25 - - | |
8773 1.38629 1.38629 1.38629 1.38629 | |
8774 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8775 26 3.20113 2.66655 3.24493 0.16155 26 - - | |
8776 1.38629 1.38629 1.38629 1.38629 | |
8777 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8778 27 3.20113 2.66655 3.24493 0.16155 27 - - | |
8779 1.38629 1.38629 1.38629 1.38629 | |
8780 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8781 28 3.55943 0.11610 3.60336 2.92009 28 - - | |
8782 1.38629 1.38629 1.38629 1.38629 | |
8783 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8784 29 3.55943 0.11610 3.60336 2.92009 29 - - | |
8785 1.38629 1.38629 1.38629 1.38629 | |
8786 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8787 30 3.55943 0.11610 3.60336 2.92009 30 - - | |
8788 1.38629 1.38629 1.38629 1.38629 | |
8789 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8790 31 0.12818 3.49033 2.87299 3.40262 31 - - | |
8791 1.38629 1.38629 1.38629 1.38629 | |
8792 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8793 32 2.51659 1.18738 2.58588 0.61820 32 - - | |
8794 1.38629 1.38629 1.38629 1.38629 | |
8795 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8796 33 0.12818 3.49033 2.87299 3.40262 33 - - | |
8797 1.38629 1.38629 1.38629 1.38629 | |
8798 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8799 34 0.12818 3.49033 2.87299 3.40262 34 - - | |
8800 1.38629 1.38629 1.38629 1.38629 | |
8801 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8802 35 3.55943 0.11610 3.60336 2.92009 35 - - | |
8803 1.38629 1.38629 1.38629 1.38629 | |
8804 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8805 36 3.02284 3.69821 0.10576 3.61463 36 - - | |
8806 1.38629 1.38629 1.38629 1.38629 | |
8807 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8808 37 0.12818 3.49033 2.87299 3.40262 37 - - | |
8809 1.38629 1.38629 1.38629 1.38629 | |
8810 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8811 38 3.20113 2.66655 3.24493 0.16155 38 - - | |
8812 1.38629 1.38629 1.38629 1.38629 | |
8813 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8814 39 3.02284 3.69821 0.10576 3.61463 39 - - | |
8815 1.38629 1.38629 1.38629 1.38629 | |
8816 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8817 40 0.12818 3.49033 2.87299 3.40262 40 - - | |
8818 1.38629 1.38629 1.38629 1.38629 | |
8819 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8820 41 0.12818 3.49033 2.87299 3.40262 41 - - | |
8821 1.38629 1.38629 1.38629 1.38629 | |
8822 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8823 42 3.02284 3.69821 0.10576 3.61463 42 - - | |
8824 1.38629 1.38629 1.38629 1.38629 | |
8825 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8826 43 0.12818 3.49033 2.87299 3.40262 43 - - | |
8827 1.38629 1.38629 1.38629 1.38629 | |
8828 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8829 44 0.12818 3.49033 2.87299 3.40262 44 - - | |
8830 1.38629 1.38629 1.38629 1.38629 | |
8831 0.03456 4.07546 4.07546 1.46634 0.26236 1.09861 0.40547 | |
8832 45 3.55943 0.11610 3.60336 2.92009 45 - - | |
8833 1.38629 1.38629 1.38629 1.38629 | |
8834 0.01743 4.05833 * 1.46634 0.26236 0.00000 * | |
8835 // | |
8836 HMMER3/b [3.0 | March 2010] | |
8837 NAME 2_5.8_Alveolata_58S_start_sixb_long | |
8838 LENG 45 | |
8839 ALPH DNA | |
8840 RF no | |
8841 CS no | |
8842 MAP yes | |
8843 DATE Wed Feb 29 13:26:43 2012 | |
8844 NSEQ 8 | |
8845 EFFN 3.558594 | |
8846 CKSUM 2758897519 | |
8847 STATS LOCAL MSV -7.6565 0.71933 | |
8848 STATS LOCAL VITERBI -7.6277 0.71933 | |
8849 STATS LOCAL FORWARD -3.9158 0.71933 | |
8850 HMM A C G T | |
8851 m->m m->i m->d i->m i->i d->m d->d | |
8852 COMPO 1.10338 1.44505 1.58840 1.47724 | |
8853 1.38629 1.38629 1.38629 1.38629 | |
8854 0.03535 4.05328 4.05328 1.46634 0.26236 0.00000 * | |
8855 1 0.13267 3.45290 2.84891 3.36153 1 - - | |
8856 1.38629 1.38629 1.38629 1.38629 | |
8857 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8858 2 0.13267 3.45290 2.84891 3.36153 2 - - | |
8859 1.38629 1.38629 1.38629 1.38629 | |
8860 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8861 3 0.13267 3.45290 2.84891 3.36153 3 - - | |
8862 1.38629 1.38629 1.38629 1.38629 | |
8863 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8864 4 3.16254 2.64208 3.20785 0.16721 4 - - | |
8865 1.38629 1.38629 1.38629 1.38629 | |
8866 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8867 5 3.51660 0.12068 3.56245 2.88939 5 - - | |
8868 1.38629 1.38629 1.38629 1.38629 | |
8869 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8870 6 3.51660 0.12068 3.56245 2.88939 6 - - | |
8871 1.38629 1.38629 1.38629 1.38629 | |
8872 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8873 7 3.16254 2.64208 3.20785 0.16721 7 - - | |
8874 1.38629 1.38629 1.38629 1.38629 | |
8875 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8876 8 3.51660 0.12068 3.56245 2.88939 8 - - | |
8877 1.38629 1.38629 1.38629 1.38629 | |
8878 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8879 9 0.13267 3.45290 2.84891 3.36153 9 - - | |
8880 1.38629 1.38629 1.38629 1.38629 | |
8881 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8882 10 0.13267 3.45290 2.84891 3.36153 10 - - | |
8883 1.38629 1.38629 1.38629 1.38629 | |
8884 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8885 11 3.51660 0.12068 3.56245 2.88939 11 - - | |
8886 1.38629 1.38629 1.38629 1.38629 | |
8887 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8888 12 2.99754 3.66093 0.10946 3.57332 12 - - | |
8889 1.38629 1.38629 1.38629 1.38629 | |
8890 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8891 13 0.13267 3.45290 2.84891 3.36153 13 - - | |
8892 1.38629 1.38629 1.38629 1.38629 | |
8893 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8894 14 3.16254 2.64208 3.20785 0.16721 14 - - | |
8895 1.38629 1.38629 1.38629 1.38629 | |
8896 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8897 15 2.99754 3.66093 0.10946 3.57332 15 - - | |
8898 1.38629 1.38629 1.38629 1.38629 | |
8899 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8900 16 2.99754 3.66093 0.10946 3.57332 16 - - | |
8901 1.38629 1.38629 1.38629 1.38629 | |
8902 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8903 17 0.13267 3.45290 2.84891 3.36153 17 - - | |
8904 1.38629 1.38629 1.38629 1.38629 | |
8905 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8906 18 3.16254 2.64208 3.20785 0.16721 18 - - | |
8907 1.38629 1.38629 1.38629 1.38629 | |
8908 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8909 19 0.39802 2.79742 1.62044 2.66543 19 - - | |
8910 1.38629 1.38629 1.38629 1.38629 | |
8911 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8912 20 3.16254 2.64208 3.20785 0.16721 20 - - | |
8913 1.38629 1.38629 1.38629 1.38629 | |
8914 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8915 21 3.51660 0.12068 3.56245 2.88939 21 - - | |
8916 1.38629 1.38629 1.38629 1.38629 | |
8917 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8918 22 3.16254 2.64208 3.20785 0.16721 22 - - | |
8919 1.38629 1.38629 1.38629 1.38629 | |
8920 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8921 23 0.13267 3.45290 2.84891 3.36153 23 - - | |
8922 1.38629 1.38629 1.38629 1.38629 | |
8923 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8924 24 2.99754 3.66093 0.10946 3.57332 24 - - | |
8925 1.38629 1.38629 1.38629 1.38629 | |
8926 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8927 25 2.99754 3.66093 0.10946 3.57332 25 - - | |
8928 1.38629 1.38629 1.38629 1.38629 | |
8929 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8930 26 3.16254 2.64208 3.20785 0.16721 26 - - | |
8931 1.38629 1.38629 1.38629 1.38629 | |
8932 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8933 27 3.16254 2.64208 3.20785 0.16721 27 - - | |
8934 1.38629 1.38629 1.38629 1.38629 | |
8935 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8936 28 3.51660 0.12068 3.56245 2.88939 28 - - | |
8937 1.38629 1.38629 1.38629 1.38629 | |
8938 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8939 29 3.51660 0.12068 3.56245 2.88939 29 - - | |
8940 1.38629 1.38629 1.38629 1.38629 | |
8941 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8942 30 2.63794 1.53936 2.70289 0.43547 30 - - | |
8943 1.38629 1.38629 1.38629 1.38629 | |
8944 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8945 31 0.13267 3.45290 2.84891 3.36153 31 - - | |
8946 1.38629 1.38629 1.38629 1.38629 | |
8947 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8948 32 3.51660 0.12068 3.56245 2.88939 32 - - | |
8949 1.38629 1.38629 1.38629 1.38629 | |
8950 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8951 33 1.49627 2.23192 2.35305 0.55576 33 - - | |
8952 1.38629 1.38629 1.38629 1.38629 | |
8953 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8954 34 0.13267 3.45290 2.84891 3.36153 34 - - | |
8955 1.38629 1.38629 1.38629 1.38629 | |
8956 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8957 35 3.51660 0.12068 3.56245 2.88939 35 - - | |
8958 1.38629 1.38629 1.38629 1.38629 | |
8959 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8960 36 2.99754 3.66093 0.10946 3.57332 36 - - | |
8961 1.38629 1.38629 1.38629 1.38629 | |
8962 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8963 37 0.13267 3.45290 2.84891 3.36153 37 - - | |
8964 1.38629 1.38629 1.38629 1.38629 | |
8965 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8966 38 3.16254 2.64208 3.20785 0.16721 38 - - | |
8967 1.38629 1.38629 1.38629 1.38629 | |
8968 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8969 39 2.99754 3.66093 0.10946 3.57332 39 - - | |
8970 1.38629 1.38629 1.38629 1.38629 | |
8971 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8972 40 0.13267 3.45290 2.84891 3.36153 40 - - | |
8973 1.38629 1.38629 1.38629 1.38629 | |
8974 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8975 41 0.13267 3.45290 2.84891 3.36153 41 - - | |
8976 1.38629 1.38629 1.38629 1.38629 | |
8977 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8978 42 2.99754 3.66093 0.10946 3.57332 42 - - | |
8979 1.38629 1.38629 1.38629 1.38629 | |
8980 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8981 43 0.13267 3.45290 2.84891 3.36153 43 - - | |
8982 1.38629 1.38629 1.38629 1.38629 | |
8983 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8984 44 0.13267 3.45290 2.84891 3.36153 44 - - | |
8985 1.38629 1.38629 1.38629 1.38629 | |
8986 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 | |
8987 45 3.51660 0.12068 3.56245 2.88939 45 - - | |
8988 1.38629 1.38629 1.38629 1.38629 | |
8989 0.01783 4.03576 * 1.46634 0.26236 0.00000 * | |
8990 // | |
8991 HMMER3/b [3.0 | March 2010] | |
8992 NAME 2_5.8_Alveolata_58S_start_sixc_long | |
8993 LENG 45 | |
8994 ALPH DNA | |
8995 RF no | |
8996 CS no | |
8997 MAP yes | |
8998 DATE Wed Feb 29 13:26:50 2012 | |
8999 NSEQ 13 | |
9000 EFFN 3.443604 | |
9001 CKSUM 4173496295 | |
9002 STATS LOCAL MSV -7.6779 0.71933 | |
9003 STATS LOCAL VITERBI -7.6270 0.71933 | |
9004 STATS LOCAL FORWARD -4.2468 0.71933 | |
9005 HMM A C G T | |
9006 m->m m->i m->d i->m i->i d->m d->d | |
9007 COMPO 1.09130 1.57353 1.59959 1.36677 | |
9008 1.38629 1.38629 1.38629 1.38629 | |
9009 0.03608 4.03311 4.03311 1.46634 0.26236 0.00000 * | |
9010 1 0.13699 3.41821 2.82651 3.32349 1 - - | |
9011 1.38629 1.38629 1.38629 1.38629 | |
9012 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9013 2 0.13699 3.41821 2.82651 3.32349 2 - - | |
9014 1.38629 1.38629 1.38629 1.38629 | |
9015 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9016 3 0.13699 3.41821 2.82651 3.32349 3 - - | |
9017 1.38629 1.38629 1.38629 1.38629 | |
9018 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9019 4 3.12708 2.61958 3.17375 0.17260 4 - - | |
9020 1.38629 1.38629 1.38629 1.38629 | |
9021 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9022 5 3.12708 2.61958 3.17375 0.17260 5 - - | |
9023 1.38629 1.38629 1.38629 1.38629 | |
9024 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9025 6 3.12708 2.61958 3.17375 0.17260 6 - - | |
9026 1.38629 1.38629 1.38629 1.38629 | |
9027 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9028 7 3.12708 2.61958 3.17375 0.17260 7 - - | |
9029 1.38629 1.38629 1.38629 1.38629 | |
9030 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9031 8 3.47678 0.12512 3.52437 2.86068 8 - - | |
9032 1.38629 1.38629 1.38629 1.38629 | |
9033 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9034 9 0.13699 3.41821 2.82651 3.32349 9 - - | |
9035 1.38629 1.38629 1.38629 1.38629 | |
9036 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9037 10 0.13699 3.41821 2.82651 3.32349 10 - - | |
9038 1.38629 1.38629 1.38629 1.38629 | |
9039 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9040 11 3.47678 0.12512 3.52437 2.86068 11 - - | |
9041 1.38629 1.38629 1.38629 1.38629 | |
9042 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9043 12 2.97381 3.62611 0.11305 3.53480 12 - - | |
9044 1.38629 1.38629 1.38629 1.38629 | |
9045 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9046 13 0.13699 3.41821 2.82651 3.32349 13 - - | |
9047 1.38629 1.38629 1.38629 1.38629 | |
9048 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9049 14 3.12708 2.61958 3.17375 0.17260 14 - - | |
9050 1.38629 1.38629 1.38629 1.38629 | |
9051 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9052 15 2.97381 3.62611 0.11305 3.53480 15 - - | |
9053 1.38629 1.38629 1.38629 1.38629 | |
9054 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9055 16 2.97381 3.62611 0.11305 3.53480 16 - - | |
9056 1.38629 1.38629 1.38629 1.38629 | |
9057 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9058 17 0.13699 3.41821 2.82651 3.32349 17 - - | |
9059 1.38629 1.38629 1.38629 1.38629 | |
9060 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9061 18 3.12708 2.61958 3.17375 0.17260 18 - - | |
9062 1.38629 1.38629 1.38629 1.38629 | |
9063 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9064 19 0.13699 3.41821 2.82651 3.32349 19 - - | |
9065 1.38629 1.38629 1.38629 1.38629 | |
9066 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9067 20 3.12708 2.61958 3.17375 0.17260 20 - - | |
9068 1.38629 1.38629 1.38629 1.38629 | |
9069 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9070 21 3.47678 0.12512 3.52437 2.86068 21 - - | |
9071 1.38629 1.38629 1.38629 1.38629 | |
9072 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9073 22 3.12708 2.61958 3.17375 0.17260 22 - - | |
9074 1.38629 1.38629 1.38629 1.38629 | |
9075 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9076 23 0.13699 3.41821 2.82651 3.32349 23 - - | |
9077 1.38629 1.38629 1.38629 1.38629 | |
9078 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9079 24 2.97381 3.62611 0.11305 3.53480 24 - - | |
9080 1.38629 1.38629 1.38629 1.38629 | |
9081 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9082 25 2.97381 3.62611 0.11305 3.53480 25 - - | |
9083 1.38629 1.38629 1.38629 1.38629 | |
9084 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9085 26 3.47678 0.12512 3.52437 2.86068 26 - - | |
9086 1.38629 1.38629 1.38629 1.38629 | |
9087 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9088 27 3.12708 2.61958 3.17375 0.17260 27 - - | |
9089 1.38629 1.38629 1.38629 1.38629 | |
9090 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9091 28 3.47678 0.12512 3.52437 2.86068 28 - - | |
9092 1.38629 1.38629 1.38629 1.38629 | |
9093 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9094 29 3.47678 0.12512 3.52437 2.86068 29 - - | |
9095 1.38629 1.38629 1.38629 1.38629 | |
9096 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9097 30 3.12708 2.61958 3.17375 0.17260 30 - - | |
9098 1.38629 1.38629 1.38629 1.38629 | |
9099 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9100 31 0.13699 3.41821 2.82651 3.32349 31 - - | |
9101 1.38629 1.38629 1.38629 1.38629 | |
9102 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9103 32 3.12708 2.61958 3.17375 0.17260 32 - - | |
9104 1.38629 1.38629 1.38629 1.38629 | |
9105 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9106 33 0.13699 3.41821 2.82651 3.32349 33 - - | |
9107 1.38629 1.38629 1.38629 1.38629 | |
9108 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9109 34 1.39388 0.65071 2.27615 2.05938 34 - - | |
9110 1.38629 1.38629 1.38629 1.38629 | |
9111 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9112 35 3.47678 0.12512 3.52437 2.86068 35 - - | |
9113 1.38629 1.38629 1.38629 1.38629 | |
9114 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9115 36 2.97381 3.62611 0.11305 3.53480 36 - - | |
9116 1.38629 1.38629 1.38629 1.38629 | |
9117 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9118 37 0.13699 3.41821 2.82651 3.32349 37 - - | |
9119 1.38629 1.38629 1.38629 1.38629 | |
9120 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9121 38 3.12708 2.61958 3.17375 0.17260 38 - - | |
9122 1.38629 1.38629 1.38629 1.38629 | |
9123 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9124 39 2.97381 3.62611 0.11305 3.53480 39 - - | |
9125 1.38629 1.38629 1.38629 1.38629 | |
9126 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9127 40 0.13699 3.41821 2.82651 3.32349 40 - - | |
9128 1.38629 1.38629 1.38629 1.38629 | |
9129 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9130 41 0.13699 3.41821 2.82651 3.32349 41 - - | |
9131 1.38629 1.38629 1.38629 1.38629 | |
9132 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9133 42 2.97381 3.62611 0.11305 3.53480 42 - - | |
9134 1.38629 1.38629 1.38629 1.38629 | |
9135 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9136 43 0.13699 3.41821 2.82651 3.32349 43 - - | |
9137 1.38629 1.38629 1.38629 1.38629 | |
9138 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9139 44 0.13699 3.41821 2.82651 3.32349 44 - - | |
9140 1.38629 1.38629 1.38629 1.38629 | |
9141 0.03608 4.03311 4.03311 1.46634 0.26236 1.09861 0.40547 | |
9142 45 3.47678 0.12512 3.52437 2.86068 45 - - | |
9143 1.38629 1.38629 1.38629 1.38629 | |
9144 0.01820 4.01523 * 1.46634 0.26236 0.00000 * | |
9145 // | |
9146 HMMER3/b [3.0 | March 2010] | |
9147 NAME 2_5.8_Alveolata_58S_start_sixd_long | |
9148 LENG 45 | |
9149 ALPH DNA | |
9150 RF no | |
9151 CS no | |
9152 MAP yes | |
9153 DATE Wed Feb 29 13:26:56 2012 | |
9154 NSEQ 18 | |
9155 EFFN 3.739746 | |
9156 CKSUM 2077131438 | |
9157 STATS LOCAL MSV -7.3089 0.71933 | |
9158 STATS LOCAL VITERBI -7.8161 0.71933 | |
9159 STATS LOCAL FORWARD -4.1699 0.71933 | |
9160 HMM A C G T | |
9161 m->m m->i m->d i->m i->i d->m d->d | |
9162 COMPO 1.13317 1.60280 1.55991 1.32237 | |
9163 1.38629 1.38629 1.38629 1.38629 | |
9164 0.03425 4.08425 4.08425 1.46634 0.26236 0.00000 * | |
9165 1 0.12648 3.50496 2.88239 3.41868 1 - - | |
9166 1.38629 1.38629 1.38629 1.38629 | |
9167 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9168 2 0.12648 3.50496 2.88239 3.41868 2 - - | |
9169 1.38629 1.38629 1.38629 1.38629 | |
9170 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9171 3 0.12648 3.50496 2.88239 3.41868 3 - - | |
9172 1.38629 1.38629 1.38629 1.38629 | |
9173 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9174 4 3.21631 2.67616 3.25951 0.15939 4 - - | |
9175 1.38629 1.38629 1.38629 1.38629 | |
9176 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9177 5 3.21631 2.67616 3.25951 0.15939 5 - - | |
9178 1.38629 1.38629 1.38629 1.38629 | |
9179 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9180 6 3.21631 2.67616 3.25951 0.15939 6 - - | |
9181 1.38629 1.38629 1.38629 1.38629 | |
9182 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9183 7 3.21631 2.67616 3.25951 0.15939 7 - - | |
9184 1.38629 1.38629 1.38629 1.38629 | |
9185 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9186 8 3.57612 0.11437 3.61930 2.93201 8 - - | |
9187 1.38629 1.38629 1.38629 1.38629 | |
9188 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9189 9 0.12648 3.50496 2.88239 3.41868 9 - - | |
9190 1.38629 1.38629 1.38629 1.38629 | |
9191 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9192 10 0.12648 3.50496 2.88239 3.41868 10 - - | |
9193 1.38629 1.38629 1.38629 1.38629 | |
9194 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9195 11 3.57612 0.11437 3.61930 2.93201 11 - - | |
9196 1.38629 1.38629 1.38629 1.38629 | |
9197 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9198 12 3.03265 3.71270 0.10436 3.63069 12 - - | |
9199 1.38629 1.38629 1.38629 1.38629 | |
9200 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9201 13 0.28094 3.03315 1.94829 2.91416 13 - - | |
9202 1.38629 1.38629 1.38629 1.38629 | |
9203 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9204 14 3.21631 2.67616 3.25951 0.15939 14 - - | |
9205 1.38629 1.38629 1.38629 1.38629 | |
9206 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9207 15 3.03265 3.71270 0.10436 3.63069 15 - - | |
9208 1.38629 1.38629 1.38629 1.38629 | |
9209 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9210 16 3.03265 3.71270 0.10436 3.63069 16 - - | |
9211 1.38629 1.38629 1.38629 1.38629 | |
9212 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9213 17 0.12648 3.50496 2.88239 3.41868 17 - - | |
9214 1.38629 1.38629 1.38629 1.38629 | |
9215 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9216 18 3.21631 2.67616 3.25951 0.15939 18 - - | |
9217 1.38629 1.38629 1.38629 1.38629 | |
9218 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9219 19 0.12648 3.50496 2.88239 3.41868 19 - - | |
9220 1.38629 1.38629 1.38629 1.38629 | |
9221 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9222 20 3.21631 2.67616 3.25951 0.15939 20 - - | |
9223 1.38629 1.38629 1.38629 1.38629 | |
9224 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9225 21 3.57612 0.11437 3.61930 2.93201 21 - - | |
9226 1.38629 1.38629 1.38629 1.38629 | |
9227 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9228 22 3.21631 2.67616 3.25951 0.15939 22 - - | |
9229 1.38629 1.38629 1.38629 1.38629 | |
9230 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9231 23 2.14675 2.21275 0.89986 1.00208 23 - - | |
9232 1.38629 1.38629 1.38629 1.38629 | |
9233 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9234 24 3.03265 3.71270 0.10436 3.63069 24 - - | |
9235 1.38629 1.38629 1.38629 1.38629 | |
9236 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9237 25 3.03265 3.71270 0.10436 3.63069 25 - - | |
9238 1.38629 1.38629 1.38629 1.38629 | |
9239 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9240 26 2.92927 2.02237 2.98433 0.26965 26 - - | |
9241 1.38629 1.38629 1.38629 1.38629 | |
9242 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9243 27 3.21631 2.67616 3.25951 0.15939 27 - - | |
9244 1.38629 1.38629 1.38629 1.38629 | |
9245 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9246 28 3.57612 0.11437 3.61930 2.93201 28 - - | |
9247 1.38629 1.38629 1.38629 1.38629 | |
9248 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9249 29 3.57612 0.11437 3.61930 2.93201 29 - - | |
9250 1.38629 1.38629 1.38629 1.38629 | |
9251 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9252 30 3.57612 0.11437 3.61930 2.93201 30 - - | |
9253 1.38629 1.38629 1.38629 1.38629 | |
9254 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9255 31 0.12648 3.50496 2.88239 3.41868 31 - - | |
9256 1.38629 1.38629 1.38629 1.38629 | |
9257 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9258 32 3.21631 2.67616 3.25951 0.15939 32 - - | |
9259 1.38629 1.38629 1.38629 1.38629 | |
9260 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9261 33 0.12648 3.50496 2.88239 3.41868 33 - - | |
9262 1.38629 1.38629 1.38629 1.38629 | |
9263 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9264 34 0.94678 2.19731 2.21189 0.93798 34 - - | |
9265 1.38629 1.38629 1.38629 1.38629 | |
9266 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9267 35 3.57612 0.11437 3.61930 2.93201 35 - - | |
9268 1.38629 1.38629 1.38629 1.38629 | |
9269 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9270 36 3.03265 3.71270 0.10436 3.63069 36 - - | |
9271 1.38629 1.38629 1.38629 1.38629 | |
9272 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9273 37 0.12648 3.50496 2.88239 3.41868 37 - - | |
9274 1.38629 1.38629 1.38629 1.38629 | |
9275 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9276 38 3.21631 2.67616 3.25951 0.15939 38 - - | |
9277 1.38629 1.38629 1.38629 1.38629 | |
9278 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9279 39 3.03265 3.71270 0.10436 3.63069 39 - - | |
9280 1.38629 1.38629 1.38629 1.38629 | |
9281 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9282 40 0.12648 3.50496 2.88239 3.41868 40 - - | |
9283 1.38629 1.38629 1.38629 1.38629 | |
9284 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9285 41 0.12648 3.50496 2.88239 3.41868 41 - - | |
9286 1.38629 1.38629 1.38629 1.38629 | |
9287 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9288 42 3.03265 3.71270 0.10436 3.63069 42 - - | |
9289 1.38629 1.38629 1.38629 1.38629 | |
9290 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9291 43 0.12648 3.50496 2.88239 3.41868 43 - - | |
9292 1.38629 1.38629 1.38629 1.38629 | |
9293 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9294 44 0.12648 3.50496 2.88239 3.41868 44 - - | |
9295 1.38629 1.38629 1.38629 1.38629 | |
9296 0.03425 4.08425 4.08425 1.46634 0.26236 1.09861 0.40547 | |
9297 45 3.57612 0.11437 3.61930 2.93201 45 - - | |
9298 1.38629 1.38629 1.38629 1.38629 | |
9299 0.01727 4.06727 * 1.46634 0.26236 0.00000 * | |
9300 // | |
9301 HMMER3/b [3.0 | March 2010] | |
9302 NAME 2_5.8_Alveolata_58S_start_ten_long | |
9303 LENG 45 | |
9304 ALPH DNA | |
9305 RF no | |
9306 CS no | |
9307 MAP yes | |
9308 DATE Wed Feb 29 13:27:21 2012 | |
9309 NSEQ 22 | |
9310 EFFN 3.236084 | |
9311 CKSUM 2896313313 | |
9312 STATS LOCAL MSV -8.1273 0.71932 | |
9313 STATS LOCAL VITERBI -7.6160 0.71932 | |
9314 STATS LOCAL FORWARD -3.9033 0.71932 | |
9315 HMM A C G T | |
9316 m->m m->i m->d i->m i->i d->m d->d | |
9317 COMPO 1.53686 1.12476 1.25556 1.74127 | |
9318 1.38629 1.38629 1.38629 1.38629 | |
9319 0.03749 3.99564 3.99564 1.46634 0.26236 0.00000 * | |
9320 1 1.49846 0.59962 2.29674 2.06420 1 - - | |
9321 1.38629 1.38629 1.38629 1.38629 | |
9322 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9323 2 0.14567 3.35213 2.78361 3.25115 2 - - | |
9324 1.38629 1.38629 1.38629 1.38629 | |
9325 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9326 3 0.14567 3.35213 2.78361 3.25115 3 - - | |
9327 1.38629 1.38629 1.38629 1.38629 | |
9328 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9329 4 3.40067 0.13415 3.45149 2.80532 4 - - | |
9330 1.38629 1.38629 1.38629 1.38629 | |
9331 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9332 5 3.06030 2.57712 3.10954 0.18331 5 - - | |
9333 1.38629 1.38629 1.38629 1.38629 | |
9334 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9335 6 3.40067 0.13415 3.45149 2.80532 6 - - | |
9336 1.38629 1.38629 1.38629 1.38629 | |
9337 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9338 7 3.40067 0.13415 3.45149 2.80532 7 - - | |
9339 1.38629 1.38629 1.38629 1.38629 | |
9340 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9341 8 3.40067 0.13415 3.45149 2.80532 8 - - | |
9342 1.38629 1.38629 1.38629 1.38629 | |
9343 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9344 9 0.14567 3.35213 2.78361 3.25115 9 - - | |
9345 1.38629 1.38629 1.38629 1.38629 | |
9346 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9347 10 2.92780 3.55913 0.12034 3.46085 10 - - | |
9348 1.38629 1.38629 1.38629 1.38629 | |
9349 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9350 11 3.40067 0.13415 3.45149 2.80532 11 - - | |
9351 1.38629 1.38629 1.38629 1.38629 | |
9352 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9353 12 2.92780 3.55913 0.12034 3.46085 12 - - | |
9354 1.38629 1.38629 1.38629 1.38629 | |
9355 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9356 13 0.14567 3.35213 2.78361 3.25115 13 - - | |
9357 1.38629 1.38629 1.38629 1.38629 | |
9358 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9359 14 3.06030 2.57712 3.10954 0.18331 14 - - | |
9360 1.38629 1.38629 1.38629 1.38629 | |
9361 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9362 15 2.92780 3.55913 0.12034 3.46085 15 - - | |
9363 1.38629 1.38629 1.38629 1.38629 | |
9364 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9365 16 2.92780 3.55913 0.12034 3.46085 16 - - | |
9366 1.38629 1.38629 1.38629 1.38629 | |
9367 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9368 17 0.14567 3.35213 2.78361 3.25115 17 - - | |
9369 1.38629 1.38629 1.38629 1.38629 | |
9370 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9371 18 3.06030 2.57712 3.10954 0.18331 18 - - | |
9372 1.38629 1.38629 1.38629 1.38629 | |
9373 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9374 19 2.92780 3.55913 0.12034 3.46085 19 - - | |
9375 1.38629 1.38629 1.38629 1.38629 | |
9376 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9377 20 3.40067 0.13415 3.45149 2.80532 20 - - | |
9378 1.38629 1.38629 1.38629 1.38629 | |
9379 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9380 21 3.40067 0.13415 3.45149 2.80532 21 - - | |
9381 1.38629 1.38629 1.38629 1.38629 | |
9382 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9383 22 3.06030 2.57712 3.10954 0.18331 22 - - | |
9384 1.38629 1.38629 1.38629 1.38629 | |
9385 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9386 23 3.40067 0.13415 3.45149 2.80532 23 - - | |
9387 1.38629 1.38629 1.38629 1.38629 | |
9388 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9389 24 2.92780 3.55913 0.12034 3.46085 24 - - | |
9390 1.38629 1.38629 1.38629 1.38629 | |
9391 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9392 25 2.92780 3.55913 0.12034 3.46085 25 - - | |
9393 1.38629 1.38629 1.38629 1.38629 | |
9394 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9395 26 3.40067 0.13415 3.45149 2.80532 26 - - | |
9396 1.38629 1.38629 1.38629 1.38629 | |
9397 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9398 27 3.06030 2.57712 3.10954 0.18331 27 - - | |
9399 1.38629 1.38629 1.38629 1.38629 | |
9400 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9401 28 3.40067 0.13415 3.45149 2.80532 28 - - | |
9402 1.38629 1.38629 1.38629 1.38629 | |
9403 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9404 29 2.92780 3.55913 0.12034 3.46085 29 - - | |
9405 1.38629 1.38629 1.38629 1.38629 | |
9406 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9407 30 3.40067 0.13415 3.45149 2.80532 30 - - | |
9408 1.38629 1.38629 1.38629 1.38629 | |
9409 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9410 31 2.92780 3.55913 0.12034 3.46085 31 - - | |
9411 1.38629 1.38629 1.38629 1.38629 | |
9412 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9413 32 3.40067 0.13415 3.45149 2.80532 32 - - | |
9414 1.38629 1.38629 1.38629 1.38629 | |
9415 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9416 33 3.40067 0.13415 3.45149 2.80532 33 - - | |
9417 1.38629 1.38629 1.38629 1.38629 | |
9418 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9419 34 3.06030 2.57712 3.10954 0.18331 34 - - | |
9420 1.38629 1.38629 1.38629 1.38629 | |
9421 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9422 35 3.40067 0.13415 3.45149 2.80532 35 - - | |
9423 1.38629 1.38629 1.38629 1.38629 | |
9424 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9425 36 2.92780 3.55913 0.12034 3.46085 36 - - | |
9426 1.38629 1.38629 1.38629 1.38629 | |
9427 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9428 37 0.14567 3.35213 2.78361 3.25115 37 - - | |
9429 1.38629 1.38629 1.38629 1.38629 | |
9430 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9431 38 3.06030 2.57712 3.10954 0.18331 38 - - | |
9432 1.38629 1.38629 1.38629 1.38629 | |
9433 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9434 39 2.92780 3.55913 0.12034 3.46085 39 - - | |
9435 1.38629 1.38629 1.38629 1.38629 | |
9436 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9437 40 0.14567 3.35213 2.78361 3.25115 40 - - | |
9438 1.38629 1.38629 1.38629 1.38629 | |
9439 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9440 41 0.14567 3.35213 2.78361 3.25115 41 - - | |
9441 1.38629 1.38629 1.38629 1.38629 | |
9442 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9443 42 2.92780 3.55913 0.12034 3.46085 42 - - | |
9444 1.38629 1.38629 1.38629 1.38629 | |
9445 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9446 43 2.92780 3.55913 0.12034 3.46085 43 - - | |
9447 1.38629 1.38629 1.38629 1.38629 | |
9448 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9449 44 0.14567 3.35213 2.78361 3.25115 44 - - | |
9450 1.38629 1.38629 1.38629 1.38629 | |
9451 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 | |
9452 45 3.40067 0.13415 3.45149 2.80532 45 - - | |
9453 1.38629 1.38629 1.38629 1.38629 | |
9454 0.01892 3.97708 * 1.46634 0.26236 0.00000 * | |
9455 // | |
9456 HMMER3/b [3.0 | March 2010] | |
9457 NAME 2_5.8_Alveolata_58S_start_thirteen_long | |
9458 LENG 45 | |
9459 ALPH DNA | |
9460 RF no | |
9461 CS no | |
9462 MAP yes | |
9463 DATE Wed Feb 29 13:28:05 2012 | |
9464 NSEQ 8 | |
9465 EFFN 3.175781 | |
9466 CKSUM 2342198515 | |
9467 STATS LOCAL MSV -8.1781 0.71931 | |
9468 STATS LOCAL VITERBI -7.7853 0.71931 | |
9469 STATS LOCAL FORWARD -4.2608 0.71931 | |
9470 HMM A C G T | |
9471 m->m m->i m->d i->m i->i d->m d->d | |
9472 COMPO 1.21574 1.40301 1.31193 1.66943 | |
9473 1.38629 1.38629 1.38629 1.38629 | |
9474 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 * | |
9475 1 0.14843 3.33206 2.77050 3.22920 1 - - | |
9476 1.38629 1.38629 1.38629 1.38629 | |
9477 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9478 2 0.14843 3.33206 2.77050 3.22920 2 - - | |
9479 1.38629 1.38629 1.38629 1.38629 | |
9480 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9481 3 0.14843 3.33206 2.77050 3.22920 3 - - | |
9482 1.38629 1.38629 1.38629 1.38629 | |
9483 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9484 4 3.37748 0.13704 3.42926 2.78832 4 - - | |
9485 1.38629 1.38629 1.38629 1.38629 | |
9486 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9487 5 3.04021 2.56430 3.09020 0.18668 5 - - | |
9488 1.38629 1.38629 1.38629 1.38629 | |
9489 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9490 6 3.37748 0.13704 3.42926 2.78832 6 - - | |
9491 1.38629 1.38629 1.38629 1.38629 | |
9492 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9493 7 3.04021 2.56430 3.09020 0.18668 7 - - | |
9494 1.38629 1.38629 1.38629 1.38629 | |
9495 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9496 8 3.37748 0.13704 3.42926 2.78832 8 - - | |
9497 1.38629 1.38629 1.38629 1.38629 | |
9498 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9499 9 0.14843 3.33206 2.77050 3.22920 9 - - | |
9500 1.38629 1.38629 1.38629 1.38629 | |
9501 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9502 10 0.14843 3.33206 2.77050 3.22920 10 - - | |
9503 1.38629 1.38629 1.38629 1.38629 | |
9504 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9505 11 3.37748 0.13704 3.42926 2.78832 11 - - | |
9506 1.38629 1.38629 1.38629 1.38629 | |
9507 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9508 12 2.91360 3.53861 0.12268 3.43825 12 - - | |
9509 1.38629 1.38629 1.38629 1.38629 | |
9510 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9511 13 0.14843 3.33206 2.77050 3.22920 13 - - | |
9512 1.38629 1.38629 1.38629 1.38629 | |
9513 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9514 14 3.04021 2.56430 3.09020 0.18668 14 - - | |
9515 1.38629 1.38629 1.38629 1.38629 | |
9516 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9517 15 2.91360 3.53861 0.12268 3.43825 15 - - | |
9518 1.38629 1.38629 1.38629 1.38629 | |
9519 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9520 16 2.91360 3.53861 0.12268 3.43825 16 - - | |
9521 1.38629 1.38629 1.38629 1.38629 | |
9522 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9523 17 0.14843 3.33206 2.77050 3.22920 17 - - | |
9524 1.38629 1.38629 1.38629 1.38629 | |
9525 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9526 18 3.04021 2.56430 3.09020 0.18668 18 - - | |
9527 1.38629 1.38629 1.38629 1.38629 | |
9528 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9529 19 2.91360 3.53861 0.12268 3.43825 19 - - | |
9530 1.38629 1.38629 1.38629 1.38629 | |
9531 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9532 20 3.37748 0.13704 3.42926 2.78832 20 - - | |
9533 1.38629 1.38629 1.38629 1.38629 | |
9534 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9535 21 3.37748 0.13704 3.42926 2.78832 21 - - | |
9536 1.38629 1.38629 1.38629 1.38629 | |
9537 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9538 22 3.04021 2.56430 3.09020 0.18668 22 - - | |
9539 1.38629 1.38629 1.38629 1.38629 | |
9540 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9541 23 3.37748 0.13704 3.42926 2.78832 23 - - | |
9542 1.38629 1.38629 1.38629 1.38629 | |
9543 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9544 24 2.91360 3.53861 0.12268 3.43825 24 - - | |
9545 1.38629 1.38629 1.38629 1.38629 | |
9546 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9547 25 2.91360 3.53861 0.12268 3.43825 25 - - | |
9548 1.38629 1.38629 1.38629 1.38629 | |
9549 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9550 26 3.37748 0.13704 3.42926 2.78832 26 - - | |
9551 1.38629 1.38629 1.38629 1.38629 | |
9552 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9553 27 3.04021 2.56430 3.09020 0.18668 27 - - | |
9554 1.38629 1.38629 1.38629 1.38629 | |
9555 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9556 28 3.37748 0.13704 3.42926 2.78832 28 - - | |
9557 1.38629 1.38629 1.38629 1.38629 | |
9558 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9559 29 2.91360 3.53861 0.12268 3.43825 29 - - | |
9560 1.38629 1.38629 1.38629 1.38629 | |
9561 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9562 30 0.14843 3.33206 2.77050 3.22920 30 - - | |
9563 1.38629 1.38629 1.38629 1.38629 | |
9564 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9565 31 2.91360 3.53861 0.12268 3.43825 31 - - | |
9566 1.38629 1.38629 1.38629 1.38629 | |
9567 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9568 32 0.14843 3.33206 2.77050 3.22920 32 - - | |
9569 1.38629 1.38629 1.38629 1.38629 | |
9570 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9571 33 0.14843 3.33206 2.77050 3.22920 33 - - | |
9572 1.38629 1.38629 1.38629 1.38629 | |
9573 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9574 34 3.04021 2.56430 3.09020 0.18668 34 - - | |
9575 1.38629 1.38629 1.38629 1.38629 | |
9576 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9577 35 3.37748 0.13704 3.42926 2.78832 35 - - | |
9578 1.38629 1.38629 1.38629 1.38629 | |
9579 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9580 36 2.91360 3.53861 0.12268 3.43825 36 - - | |
9581 1.38629 1.38629 1.38629 1.38629 | |
9582 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9583 37 0.14843 3.33206 2.77050 3.22920 37 - - | |
9584 1.38629 1.38629 1.38629 1.38629 | |
9585 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9586 38 3.04021 2.56430 3.09020 0.18668 38 - - | |
9587 1.38629 1.38629 1.38629 1.38629 | |
9588 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9589 39 2.91360 3.53861 0.12268 3.43825 39 - - | |
9590 1.38629 1.38629 1.38629 1.38629 | |
9591 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9592 40 0.14843 3.33206 2.77050 3.22920 40 - - | |
9593 1.38629 1.38629 1.38629 1.38629 | |
9594 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9595 41 0.14843 3.33206 2.77050 3.22920 41 - - | |
9596 1.38629 1.38629 1.38629 1.38629 | |
9597 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9598 42 2.91360 3.53861 0.12268 3.43825 42 - - | |
9599 1.38629 1.38629 1.38629 1.38629 | |
9600 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9601 43 2.91360 3.53861 0.12268 3.43825 43 - - | |
9602 1.38629 1.38629 1.38629 1.38629 | |
9603 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9604 44 0.14843 3.33206 2.77050 3.22920 44 - - | |
9605 1.38629 1.38629 1.38629 1.38629 | |
9606 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 | |
9607 45 3.37748 0.13704 3.42926 2.78832 45 - - | |
9608 1.38629 1.38629 1.38629 1.38629 | |
9609 0.01914 3.96571 * 1.46634 0.26236 0.00000 * | |
9610 // | |
9611 HMMER3/b [3.0 | March 2010] | |
9612 NAME 2_5.8_Alveolata_58S_start_three_long | |
9613 LENG 45 | |
9614 ALPH DNA | |
9615 RF no | |
9616 CS no | |
9617 MAP yes | |
9618 DATE Wed Feb 29 13:26:06 2012 | |
9619 NSEQ 6 | |
9620 EFFN 3.249023 | |
9621 CKSUM 954103482 | |
9622 STATS LOCAL MSV -8.0739 0.71932 | |
9623 STATS LOCAL VITERBI -7.8238 0.71932 | |
9624 STATS LOCAL FORWARD -4.1109 0.71932 | |
9625 HMM A C G T | |
9626 m->m m->i m->d i->m i->i d->m d->d | |
9627 COMPO 1.47195 1.61868 1.19247 1.31344 | |
9628 1.38629 1.38629 1.38629 1.38629 | |
9629 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 * | |
9630 1 3.06457 2.57984 3.11364 0.18260 1 - - | |
9631 1.38629 1.38629 1.38629 1.38629 | |
9632 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9633 2 3.06457 2.57984 3.11364 0.18260 2 - - | |
9634 1.38629 1.38629 1.38629 1.38629 | |
9635 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9636 3 2.93080 3.56347 0.11985 3.46564 3 - - | |
9637 1.38629 1.38629 1.38629 1.38629 | |
9638 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9639 4 3.40558 0.13354 3.45619 2.80891 4 - - | |
9640 1.38629 1.38629 1.38629 1.38629 | |
9641 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9642 5 3.06457 2.57984 3.11364 0.18260 5 - - | |
9643 1.38629 1.38629 1.38629 1.38629 | |
9644 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9645 6 3.06457 2.57984 3.11364 0.18260 6 - - | |
9646 1.38629 1.38629 1.38629 1.38629 | |
9647 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9648 7 3.06457 2.57984 3.11364 0.18260 7 - - | |
9649 1.38629 1.38629 1.38629 1.38629 | |
9650 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9651 8 3.40558 0.13354 3.45619 2.80891 8 - - | |
9652 1.38629 1.38629 1.38629 1.38629 | |
9653 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9654 9 0.14509 3.35639 2.78639 3.25580 9 - - | |
9655 1.38629 1.38629 1.38629 1.38629 | |
9656 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9657 10 2.93080 3.56347 0.11985 3.46564 10 - - | |
9658 1.38629 1.38629 1.38629 1.38629 | |
9659 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9660 11 3.40558 0.13354 3.45619 2.80891 11 - - | |
9661 1.38629 1.38629 1.38629 1.38629 | |
9662 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9663 12 2.93080 3.56347 0.11985 3.46564 12 - - | |
9664 1.38629 1.38629 1.38629 1.38629 | |
9665 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9666 13 0.14509 3.35639 2.78639 3.25580 13 - - | |
9667 1.38629 1.38629 1.38629 1.38629 | |
9668 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9669 14 3.06457 2.57984 3.11364 0.18260 14 - - | |
9670 1.38629 1.38629 1.38629 1.38629 | |
9671 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9672 15 2.93080 3.56347 0.11985 3.46564 15 - - | |
9673 1.38629 1.38629 1.38629 1.38629 | |
9674 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9675 16 2.93080 3.56347 0.11985 3.46564 16 - - | |
9676 1.38629 1.38629 1.38629 1.38629 | |
9677 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9678 17 0.14509 3.35639 2.78639 3.25580 17 - - | |
9679 1.38629 1.38629 1.38629 1.38629 | |
9680 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9681 18 3.06457 2.57984 3.11364 0.18260 18 - - | |
9682 1.38629 1.38629 1.38629 1.38629 | |
9683 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9684 19 2.93080 3.56347 0.11985 3.46564 19 - - | |
9685 1.38629 1.38629 1.38629 1.38629 | |
9686 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9687 20 3.06457 2.57984 3.11364 0.18260 20 - - | |
9688 1.38629 1.38629 1.38629 1.38629 | |
9689 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9690 21 3.40558 0.13354 3.45619 2.80891 21 - - | |
9691 1.38629 1.38629 1.38629 1.38629 | |
9692 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9693 22 3.06457 2.57984 3.11364 0.18260 22 - - | |
9694 1.38629 1.38629 1.38629 1.38629 | |
9695 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9696 23 3.06457 2.57984 3.11364 0.18260 23 - - | |
9697 1.38629 1.38629 1.38629 1.38629 | |
9698 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9699 24 2.93080 3.56347 0.11985 3.46564 24 - - | |
9700 1.38629 1.38629 1.38629 1.38629 | |
9701 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9702 25 2.93080 3.56347 0.11985 3.46564 25 - - | |
9703 1.38629 1.38629 1.38629 1.38629 | |
9704 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9705 26 3.40558 0.13354 3.45619 2.80891 26 - - | |
9706 1.38629 1.38629 1.38629 1.38629 | |
9707 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9708 27 3.06457 2.57984 3.11364 0.18260 27 - - | |
9709 1.38629 1.38629 1.38629 1.38629 | |
9710 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9711 28 3.40558 0.13354 3.45619 2.80891 28 - - | |
9712 1.38629 1.38629 1.38629 1.38629 | |
9713 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9714 29 2.93080 3.56347 0.11985 3.46564 29 - - | |
9715 1.38629 1.38629 1.38629 1.38629 | |
9716 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9717 30 0.14509 3.35639 2.78639 3.25580 30 - - | |
9718 1.38629 1.38629 1.38629 1.38629 | |
9719 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9720 31 0.14509 3.35639 2.78639 3.25580 31 - - | |
9721 1.38629 1.38629 1.38629 1.38629 | |
9722 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9723 32 3.40558 0.13354 3.45619 2.80891 32 - - | |
9724 1.38629 1.38629 1.38629 1.38629 | |
9725 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9726 33 0.14509 3.35639 2.78639 3.25580 33 - - | |
9727 1.38629 1.38629 1.38629 1.38629 | |
9728 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9729 34 0.14509 3.35639 2.78639 3.25580 34 - - | |
9730 1.38629 1.38629 1.38629 1.38629 | |
9731 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9732 35 3.06457 2.57984 3.11364 0.18260 35 - - | |
9733 1.38629 1.38629 1.38629 1.38629 | |
9734 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9735 36 2.93080 3.56347 0.11985 3.46564 36 - - | |
9736 1.38629 1.38629 1.38629 1.38629 | |
9737 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9738 37 0.14509 3.35639 2.78639 3.25580 37 - - | |
9739 1.38629 1.38629 1.38629 1.38629 | |
9740 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9741 38 3.06457 2.57984 3.11364 0.18260 38 - - | |
9742 1.38629 1.38629 1.38629 1.38629 | |
9743 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9744 39 2.93080 3.56347 0.11985 3.46564 39 - - | |
9745 1.38629 1.38629 1.38629 1.38629 | |
9746 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9747 40 0.14509 3.35639 2.78639 3.25580 40 - - | |
9748 1.38629 1.38629 1.38629 1.38629 | |
9749 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9750 41 0.14509 3.35639 2.78639 3.25580 41 - - | |
9751 1.38629 1.38629 1.38629 1.38629 | |
9752 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9753 42 2.93080 3.56347 0.11985 3.46564 42 - - | |
9754 1.38629 1.38629 1.38629 1.38629 | |
9755 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9756 43 2.93080 3.56347 0.11985 3.46564 43 - - | |
9757 1.38629 1.38629 1.38629 1.38629 | |
9758 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9759 44 2.93080 3.56347 0.11985 3.46564 44 - - | |
9760 1.38629 1.38629 1.38629 1.38629 | |
9761 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 | |
9762 45 3.40558 0.13354 3.45619 2.80891 45 - - | |
9763 1.38629 1.38629 1.38629 1.38629 | |
9764 0.01887 3.97950 * 1.46634 0.26236 0.00000 * | |
9765 // | |
9766 HMMER3/b [3.0 | March 2010] | |
9767 NAME 2_5.8_Alveolata_58S_start_twelve_long | |
9768 LENG 45 | |
9769 ALPH DNA | |
9770 RF no | |
9771 CS no | |
9772 MAP yes | |
9773 DATE Wed Feb 29 13:27:55 2012 | |
9774 NSEQ 74 | |
9775 EFFN 3.410034 | |
9776 CKSUM 388750452 | |
9777 STATS LOCAL MSV -7.4871 0.71933 | |
9778 STATS LOCAL VITERBI -7.6504 0.71933 | |
9779 STATS LOCAL FORWARD -4.1874 0.71933 | |
9780 HMM A C G T | |
9781 m->m m->i m->d i->m i->i d->m d->d | |
9782 COMPO 1.28425 1.46318 1.36431 1.44356 | |
9783 1.38629 1.38629 1.38629 1.38629 | |
9784 0.03630 4.02714 4.02714 1.46634 0.26236 0.00000 * | |
9785 1 0.13831 3.40783 2.81980 3.31211 1 - - | |
9786 1.38629 1.38629 1.38629 1.38629 | |
9787 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9788 2 0.13831 3.40783 2.81980 3.31211 2 - - | |
9789 1.38629 1.38629 1.38629 1.38629 | |
9790 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9791 3 0.13831 3.40783 2.81980 3.31211 3 - - | |
9792 1.38629 1.38629 1.38629 1.38629 | |
9793 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9794 4 3.25133 0.17525 3.30615 2.46070 4 - - | |
9795 1.38629 1.38629 1.38629 1.38629 | |
9796 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9797 5 3.11652 2.61288 3.16360 0.17424 5 - - | |
9798 1.38629 1.38629 1.38629 1.38629 | |
9799 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9800 6 3.11652 2.61288 3.16360 0.17424 6 - - | |
9801 1.38629 1.38629 1.38629 1.38629 | |
9802 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9803 7 3.11652 2.61288 3.16360 0.17424 7 - - | |
9804 1.38629 1.38629 1.38629 1.38629 | |
9805 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9806 8 3.46484 0.12649 3.51294 2.85204 8 - - | |
9807 1.38629 1.38629 1.38629 1.38629 | |
9808 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9809 9 0.13831 3.40783 2.81980 3.31211 9 - - | |
9810 1.38629 1.38629 1.38629 1.38629 | |
9811 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9812 10 2.96666 3.61565 0.11415 3.52323 10 - - | |
9813 1.38629 1.38629 1.38629 1.38629 | |
9814 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9815 11 3.46484 0.12649 3.51294 2.85204 11 - - | |
9816 1.38629 1.38629 1.38629 1.38629 | |
9817 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9818 12 0.13831 3.40783 2.81980 3.31211 12 - - | |
9819 1.38629 1.38629 1.38629 1.38629 | |
9820 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9821 13 0.13831 3.40783 2.81980 3.31211 13 - - | |
9822 1.38629 1.38629 1.38629 1.38629 | |
9823 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9824 14 3.11652 2.61288 3.16360 0.17424 14 - - | |
9825 1.38629 1.38629 1.38629 1.38629 | |
9826 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9827 15 2.96666 3.61565 0.11415 3.52323 15 - - | |
9828 1.38629 1.38629 1.38629 1.38629 | |
9829 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9830 16 2.96666 3.61565 0.11415 3.52323 16 - - | |
9831 1.38629 1.38629 1.38629 1.38629 | |
9832 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9833 17 0.13831 3.40783 2.81980 3.31211 17 - - | |
9834 1.38629 1.38629 1.38629 1.38629 | |
9835 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9836 18 3.11652 2.61288 3.16360 0.17424 18 - - | |
9837 1.38629 1.38629 1.38629 1.38629 | |
9838 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9839 19 2.96666 3.61565 0.11415 3.52323 19 - - | |
9840 1.38629 1.38629 1.38629 1.38629 | |
9841 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9842 20 3.11652 2.61288 3.16360 0.17424 20 - - | |
9843 1.38629 1.38629 1.38629 1.38629 | |
9844 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9845 21 3.46484 0.12649 3.51294 2.85204 21 - - | |
9846 1.38629 1.38629 1.38629 1.38629 | |
9847 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9848 22 3.11652 2.61288 3.16360 0.17424 22 - - | |
9849 1.38629 1.38629 1.38629 1.38629 | |
9850 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9851 23 3.11652 2.61288 3.16360 0.17424 23 - - | |
9852 1.38629 1.38629 1.38629 1.38629 | |
9853 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9854 24 2.96666 3.61565 0.11415 3.52323 24 - - | |
9855 1.38629 1.38629 1.38629 1.38629 | |
9856 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9857 25 2.96666 3.61565 0.11415 3.52323 25 - - | |
9858 1.38629 1.38629 1.38629 1.38629 | |
9859 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9860 26 3.46484 0.12649 3.51294 2.85204 26 - - | |
9861 1.38629 1.38629 1.38629 1.38629 | |
9862 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9863 27 3.11652 2.61288 3.16360 0.17424 27 - - | |
9864 1.38629 1.38629 1.38629 1.38629 | |
9865 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9866 28 3.46484 0.12649 3.51294 2.85204 28 - - | |
9867 1.38629 1.38629 1.38629 1.38629 | |
9868 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9869 29 0.41203 2.75544 1.60231 2.62160 29 - - | |
9870 1.38629 1.38629 1.38629 1.38629 | |
9871 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9872 30 3.46484 0.12649 3.51294 2.85204 30 - - | |
9873 1.38629 1.38629 1.38629 1.38629 | |
9874 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9875 31 2.96666 3.61565 0.11415 3.52323 31 - - | |
9876 1.38629 1.38629 1.38629 1.38629 | |
9877 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9878 32 3.46484 0.12649 3.51294 2.85204 32 - - | |
9879 1.38629 1.38629 1.38629 1.38629 | |
9880 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9881 33 0.13831 3.40783 2.81980 3.31211 33 - - | |
9882 1.38629 1.38629 1.38629 1.38629 | |
9883 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9884 34 2.31167 2.32835 2.73359 0.30319 34 - - | |
9885 1.38629 1.38629 1.38629 1.38629 | |
9886 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9887 35 3.46484 0.12649 3.51294 2.85204 35 - - | |
9888 1.38629 1.38629 1.38629 1.38629 | |
9889 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9890 36 2.96666 3.61565 0.11415 3.52323 36 - - | |
9891 1.38629 1.38629 1.38629 1.38629 | |
9892 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9893 37 0.16646 3.30237 2.57918 3.20130 37 - - | |
9894 1.38629 1.38629 1.38629 1.38629 | |
9895 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9896 38 3.11652 2.61288 3.16360 0.17424 38 - - | |
9897 1.38629 1.38629 1.38629 1.38629 | |
9898 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9899 39 2.96666 3.61565 0.11415 3.52323 39 - - | |
9900 1.38629 1.38629 1.38629 1.38629 | |
9901 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9902 40 0.13831 3.40783 2.81980 3.31211 40 - - | |
9903 1.38629 1.38629 1.38629 1.38629 | |
9904 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9905 41 0.13831 3.40783 2.81980 3.31211 41 - - | |
9906 1.38629 1.38629 1.38629 1.38629 | |
9907 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9908 42 2.96666 3.61565 0.11415 3.52323 42 - - | |
9909 1.38629 1.38629 1.38629 1.38629 | |
9910 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9911 43 2.96666 3.61565 0.11415 3.52323 43 - - | |
9912 1.38629 1.38629 1.38629 1.38629 | |
9913 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9914 44 0.13831 3.40783 2.81980 3.31211 44 - - | |
9915 1.38629 1.38629 1.38629 1.38629 | |
9916 0.03630 4.02714 4.02714 1.46634 0.26236 1.09861 0.40547 | |
9917 45 3.46484 0.12649 3.51294 2.85204 45 - - | |
9918 1.38629 1.38629 1.38629 1.38629 | |
9919 0.01832 4.00916 * 1.46634 0.26236 0.00000 * | |
9920 // | |
9921 HMMER3/b [3.0 | March 2010] | |
9922 NAME 2_5.8_Alveolata_58S_start_twoa_long | |
9923 LENG 45 | |
9924 ALPH DNA | |
9925 RF no | |
9926 CS no | |
9927 MAP yes | |
9928 DATE Wed Feb 29 13:25:36 2012 | |
9929 NSEQ 24 | |
9930 EFFN 3.858398 | |
9931 CKSUM 3088050842 | |
9932 STATS LOCAL MSV -7.0905 0.71932 | |
9933 STATS LOCAL VITERBI -7.7638 0.71932 | |
9934 STATS LOCAL FORWARD -3.7065 0.71932 | |
9935 HMM A C G T | |
9936 m->m m->i m->d i->m i->i d->m d->d | |
9937 COMPO 1.35209 1.39088 1.23234 1.60528 | |
9938 1.38629 1.38629 1.38629 1.38629 | |
9939 0.03357 4.10403 4.10403 1.46634 0.26236 0.00000 * | |
9940 1 3.61308 0.11065 3.65457 2.95832 1 - - | |
9941 1.38629 1.38629 1.38629 1.38629 | |
9942 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9943 2 0.12278 3.53742 2.90323 3.45435 2 - - | |
9944 1.38629 1.38629 1.38629 1.38629 | |
9945 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9946 3 0.12278 3.53742 2.90323 3.45435 3 - - | |
9947 1.38629 1.38629 1.38629 1.38629 | |
9948 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9949 4 2.85962 0.34778 2.92534 1.69931 4 - - | |
9950 1.38629 1.38629 1.38629 1.38629 | |
9951 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9952 5 3.02517 2.16151 3.07670 0.23548 5 - - | |
9953 1.38629 1.38629 1.38629 1.38629 | |
9954 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9955 6 3.25017 2.69764 3.29205 0.15468 6 - - | |
9956 1.38629 1.38629 1.38629 1.38629 | |
9957 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9958 7 3.25017 2.69764 3.29205 0.15468 7 - - | |
9959 1.38629 1.38629 1.38629 1.38629 | |
9960 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9961 8 3.61308 0.11065 3.65457 2.95832 8 - - | |
9962 1.38629 1.38629 1.38629 1.38629 | |
9963 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9964 9 0.12278 3.53742 2.90323 3.45435 9 - - | |
9965 1.38629 1.38629 1.38629 1.38629 | |
9966 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9967 10 3.05426 3.74470 0.10134 3.66619 10 - - | |
9968 1.38629 1.38629 1.38629 1.38629 | |
9969 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9970 11 3.61308 0.11065 3.65457 2.95832 11 - - | |
9971 1.38629 1.38629 1.38629 1.38629 | |
9972 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9973 12 3.05426 3.74470 0.10134 3.66619 12 - - | |
9974 1.38629 1.38629 1.38629 1.38629 | |
9975 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9976 13 0.12278 3.53742 2.90323 3.45435 13 - - | |
9977 1.38629 1.38629 1.38629 1.38629 | |
9978 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9979 14 2.56518 1.23160 2.63342 0.58082 14 - - | |
9980 1.38629 1.38629 1.38629 1.38629 | |
9981 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9982 15 3.05426 3.74470 0.10134 3.66619 15 - - | |
9983 1.38629 1.38629 1.38629 1.38629 | |
9984 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9985 16 3.05426 3.74470 0.10134 3.66619 16 - - | |
9986 1.38629 1.38629 1.38629 1.38629 | |
9987 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9988 17 0.12278 3.53742 2.90323 3.45435 17 - - | |
9989 1.38629 1.38629 1.38629 1.38629 | |
9990 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9991 18 3.25017 2.69764 3.29205 0.15468 18 - - | |
9992 1.38629 1.38629 1.38629 1.38629 | |
9993 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9994 19 3.05426 3.74470 0.10134 3.66619 19 - - | |
9995 1.38629 1.38629 1.38629 1.38629 | |
9996 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
9997 20 2.87164 1.85703 2.92932 0.30948 20 - - | |
9998 1.38629 1.38629 1.38629 1.38629 | |
9999 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10000 21 3.61308 0.11065 3.65457 2.95832 21 - - | |
10001 1.38629 1.38629 1.38629 1.38629 | |
10002 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10003 22 3.25017 2.69764 3.29205 0.15468 22 - - | |
10004 1.38629 1.38629 1.38629 1.38629 | |
10005 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10006 23 3.61308 0.11065 3.65457 2.95832 23 - - | |
10007 1.38629 1.38629 1.38629 1.38629 | |
10008 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10009 24 3.05426 3.74470 0.10134 3.66619 24 - - | |
10010 1.38629 1.38629 1.38629 1.38629 | |
10011 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10012 25 3.05426 3.74470 0.10134 3.66619 25 - - | |
10013 1.38629 1.38629 1.38629 1.38629 | |
10014 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10015 26 3.38961 0.15768 3.43962 2.52474 26 - - | |
10016 1.38629 1.38629 1.38629 1.38629 | |
10017 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10018 27 3.25017 2.69764 3.29205 0.15468 27 - - | |
10019 1.38629 1.38629 1.38629 1.38629 | |
10020 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10021 28 2.98238 0.28720 3.04518 1.88795 28 - - | |
10022 1.38629 1.38629 1.38629 1.38629 | |
10023 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10024 29 2.20598 2.99459 0.26627 2.60951 29 - - | |
10025 1.38629 1.38629 1.38629 1.38629 | |
10026 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10027 30 0.63005 2.64466 1.15619 2.50444 30 - - | |
10028 1.38629 1.38629 1.38629 1.38629 | |
10029 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10030 31 0.20489 3.24864 2.26976 3.14424 31 - - | |
10031 1.38629 1.38629 1.38629 1.38629 | |
10032 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10033 32 3.61308 0.11065 3.65457 2.95832 32 - - | |
10034 1.38629 1.38629 1.38629 1.38629 | |
10035 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10036 33 0.12278 3.53742 2.90323 3.45435 33 - - | |
10037 1.38629 1.38629 1.38629 1.38629 | |
10038 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10039 34 0.12278 3.53742 2.90323 3.45435 34 - - | |
10040 1.38629 1.38629 1.38629 1.38629 | |
10041 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10042 35 3.61308 0.11065 3.65457 2.95832 35 - - | |
10043 1.38629 1.38629 1.38629 1.38629 | |
10044 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10045 36 2.69512 3.58668 0.13413 3.49662 36 - - | |
10046 1.38629 1.38629 1.38629 1.38629 | |
10047 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10048 37 0.12278 3.53742 2.90323 3.45435 37 - - | |
10049 1.38629 1.38629 1.38629 1.38629 | |
10050 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10051 38 3.25017 2.69764 3.29205 0.15468 38 - - | |
10052 1.38629 1.38629 1.38629 1.38629 | |
10053 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10054 39 3.05426 3.74470 0.10134 3.66619 39 - - | |
10055 1.38629 1.38629 1.38629 1.38629 | |
10056 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10057 40 0.12278 3.53742 2.90323 3.45435 40 - - | |
10058 1.38629 1.38629 1.38629 1.38629 | |
10059 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10060 41 0.12278 3.53742 2.90323 3.45435 41 - - | |
10061 1.38629 1.38629 1.38629 1.38629 | |
10062 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10063 42 3.05426 3.74470 0.10134 3.66619 42 - - | |
10064 1.38629 1.38629 1.38629 1.38629 | |
10065 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10066 43 3.05426 3.74470 0.10134 3.66619 43 - - | |
10067 1.38629 1.38629 1.38629 1.38629 | |
10068 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10069 44 3.05426 3.74470 0.10134 3.66619 44 - - | |
10070 1.38629 1.38629 1.38629 1.38629 | |
10071 0.03357 4.10403 4.10403 1.46634 0.26236 1.09861 0.40547 | |
10072 45 3.61308 0.11065 3.65457 2.95832 45 - - | |
10073 1.38629 1.38629 1.38629 1.38629 | |
10074 0.01693 4.08739 * 1.46634 0.26236 0.00000 * | |
10075 // | |
10076 HMMER3/b [3.0 | March 2010] | |
10077 NAME 2_5.8_Alveolata_58S_start_twob_long | |
10078 LENG 45 | |
10079 ALPH DNA | |
10080 RF no | |
10081 CS no | |
10082 MAP yes | |
10083 DATE Wed Feb 29 13:25:43 2012 | |
10084 NSEQ 8 | |
10085 EFFN 3.222656 | |
10086 CKSUM 2547926137 | |
10087 STATS LOCAL MSV -7.7534 0.71932 | |
10088 STATS LOCAL VITERBI -7.7335 0.71932 | |
10089 STATS LOCAL FORWARD -4.0829 0.71932 | |
10090 HMM A C G T | |
10091 m->m m->i m->d i->m i->i d->m d->d | |
10092 COMPO 1.40323 1.39104 1.31591 1.43906 | |
10093 1.38629 1.38629 1.38629 1.38629 | |
10094 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * | |
10095 1 3.39555 0.13478 3.44658 2.80157 1 - - | |
10096 1.38629 1.38629 1.38629 1.38629 | |
10097 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10098 2 0.14627 3.34770 2.78072 3.24630 2 - - | |
10099 1.38629 1.38629 1.38629 1.38629 | |
10100 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10101 3 0.14627 3.34770 2.78072 3.24630 3 - - | |
10102 1.38629 1.38629 1.38629 1.38629 | |
10103 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10104 4 3.05586 2.57429 3.10526 0.18405 4 - - | |
10105 1.38629 1.38629 1.38629 1.38629 | |
10106 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10107 5 3.05586 2.57429 3.10526 0.18405 5 - - | |
10108 1.38629 1.38629 1.38629 1.38629 | |
10109 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10110 6 3.05586 2.57429 3.10526 0.18405 6 - - | |
10111 1.38629 1.38629 1.38629 1.38629 | |
10112 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10113 7 3.05586 2.57429 3.10526 0.18405 7 - - | |
10114 1.38629 1.38629 1.38629 1.38629 | |
10115 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10116 8 3.39555 0.13478 3.44658 2.80157 8 - - | |
10117 1.38629 1.38629 1.38629 1.38629 | |
10118 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10119 9 0.14627 3.34770 2.78072 3.24630 9 - - | |
10120 1.38629 1.38629 1.38629 1.38629 | |
10121 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10122 10 2.92468 3.55461 0.12085 3.45586 10 - - | |
10123 1.38629 1.38629 1.38629 1.38629 | |
10124 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10125 11 3.39555 0.13478 3.44658 2.80157 11 - - | |
10126 1.38629 1.38629 1.38629 1.38629 | |
10127 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10128 12 2.92468 3.55461 0.12085 3.45586 12 - - | |
10129 1.38629 1.38629 1.38629 1.38629 | |
10130 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10131 13 0.14627 3.34770 2.78072 3.24630 13 - - | |
10132 1.38629 1.38629 1.38629 1.38629 | |
10133 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10134 14 3.39555 0.13478 3.44658 2.80157 14 - - | |
10135 1.38629 1.38629 1.38629 1.38629 | |
10136 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10137 15 2.92468 3.55461 0.12085 3.45586 15 - - | |
10138 1.38629 1.38629 1.38629 1.38629 | |
10139 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10140 16 2.92468 3.55461 0.12085 3.45586 16 - - | |
10141 1.38629 1.38629 1.38629 1.38629 | |
10142 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10143 17 0.14627 3.34770 2.78072 3.24630 17 - - | |
10144 1.38629 1.38629 1.38629 1.38629 | |
10145 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10146 18 3.05586 2.57429 3.10526 0.18405 18 - - | |
10147 1.38629 1.38629 1.38629 1.38629 | |
10148 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10149 19 0.14627 3.34770 2.78072 3.24630 19 - - | |
10150 1.38629 1.38629 1.38629 1.38629 | |
10151 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10152 20 3.05586 2.57429 3.10526 0.18405 20 - - | |
10153 1.38629 1.38629 1.38629 1.38629 | |
10154 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10155 21 3.39555 0.13478 3.44658 2.80157 21 - - | |
10156 1.38629 1.38629 1.38629 1.38629 | |
10157 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10158 22 3.05586 2.57429 3.10526 0.18405 22 - - | |
10159 1.38629 1.38629 1.38629 1.38629 | |
10160 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10161 23 3.05586 2.57429 3.10526 0.18405 23 - - | |
10162 1.38629 1.38629 1.38629 1.38629 | |
10163 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10164 24 2.92468 3.55461 0.12085 3.45586 24 - - | |
10165 1.38629 1.38629 1.38629 1.38629 | |
10166 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10167 25 2.92468 3.55461 0.12085 3.45586 25 - - | |
10168 1.38629 1.38629 1.38629 1.38629 | |
10169 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10170 26 3.39555 0.13478 3.44658 2.80157 26 - - | |
10171 1.38629 1.38629 1.38629 1.38629 | |
10172 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10173 27 3.05586 2.57429 3.10526 0.18405 27 - - | |
10174 1.38629 1.38629 1.38629 1.38629 | |
10175 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10176 28 3.39555 0.13478 3.44658 2.80157 28 - - | |
10177 1.38629 1.38629 1.38629 1.38629 | |
10178 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10179 29 2.92468 3.55461 0.12085 3.45586 29 - - | |
10180 1.38629 1.38629 1.38629 1.38629 | |
10181 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10182 30 0.14627 3.34770 2.78072 3.24630 30 - - | |
10183 1.38629 1.38629 1.38629 1.38629 | |
10184 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10185 31 2.92468 3.55461 0.12085 3.45586 31 - - | |
10186 1.38629 1.38629 1.38629 1.38629 | |
10187 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10188 32 3.39555 0.13478 3.44658 2.80157 32 - - | |
10189 1.38629 1.38629 1.38629 1.38629 | |
10190 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10191 33 0.14627 3.34770 2.78072 3.24630 33 - - | |
10192 1.38629 1.38629 1.38629 1.38629 | |
10193 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10194 34 3.39555 0.13478 3.44658 2.80157 34 - - | |
10195 1.38629 1.38629 1.38629 1.38629 | |
10196 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10197 35 3.39555 0.13478 3.44658 2.80157 35 - - | |
10198 1.38629 1.38629 1.38629 1.38629 | |
10199 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10200 36 3.05586 2.57429 3.10526 0.18405 36 - - | |
10201 1.38629 1.38629 1.38629 1.38629 | |
10202 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10203 37 0.14627 3.34770 2.78072 3.24630 37 - - | |
10204 1.38629 1.38629 1.38629 1.38629 | |
10205 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10206 38 3.05586 2.57429 3.10526 0.18405 38 - - | |
10207 1.38629 1.38629 1.38629 1.38629 | |
10208 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10209 39 2.92468 3.55461 0.12085 3.45586 39 - - | |
10210 1.38629 1.38629 1.38629 1.38629 | |
10211 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10212 40 0.14627 3.34770 2.78072 3.24630 40 - - | |
10213 1.38629 1.38629 1.38629 1.38629 | |
10214 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10215 41 0.14627 3.34770 2.78072 3.24630 41 - - | |
10216 1.38629 1.38629 1.38629 1.38629 | |
10217 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10218 42 2.92468 3.55461 0.12085 3.45586 42 - - | |
10219 1.38629 1.38629 1.38629 1.38629 | |
10220 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10221 43 2.92468 3.55461 0.12085 3.45586 43 - - | |
10222 1.38629 1.38629 1.38629 1.38629 | |
10223 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10224 44 2.92468 3.55461 0.12085 3.45586 44 - - | |
10225 1.38629 1.38629 1.38629 1.38629 | |
10226 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 | |
10227 45 3.39555 0.13478 3.44658 2.80157 45 - - | |
10228 1.38629 1.38629 1.38629 1.38629 | |
10229 0.01897 3.97456 * 1.46634 0.26236 0.00000 * | |
10230 // | |
10231 HMMER3/b [3.0 | March 2010] | |
10232 NAME 2_5.8_Alveolata_58S_start_twoc_long | |
10233 LENG 45 | |
10234 ALPH DNA | |
10235 RF no | |
10236 CS no | |
10237 MAP yes | |
10238 DATE Wed Feb 29 13:25:48 2012 | |
10239 NSEQ 25 | |
10240 EFFN 3.573608 | |
10241 CKSUM 3334689644 | |
10242 STATS LOCAL MSV -7.4338 0.71933 | |
10243 STATS LOCAL VITERBI -7.6275 0.71933 | |
10244 STATS LOCAL FORWARD -3.9955 0.71933 | |
10245 HMM A C G T | |
10246 m->m m->i m->d i->m i->i d->m d->d | |
10247 COMPO 1.54120 1.41879 1.21665 1.39575 | |
10248 1.38629 1.38629 1.38629 1.38629 | |
10249 0.03525 4.05588 4.05588 1.46634 0.26236 0.00000 * | |
10250 1 3.52168 0.12012 3.56730 2.89304 1 - - | |
10251 1.38629 1.38629 1.38629 1.38629 | |
10252 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10253 2 0.13213 3.45734 2.85176 3.36640 2 - - | |
10254 1.38629 1.38629 1.38629 1.38629 | |
10255 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10256 3 0.13213 3.45734 2.85176 3.36640 3 - - | |
10257 1.38629 1.38629 1.38629 1.38629 | |
10258 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10259 4 3.52168 0.12012 3.56730 2.89304 4 - - | |
10260 1.38629 1.38629 1.38629 1.38629 | |
10261 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10262 5 3.16710 2.64497 3.21222 0.16653 5 - - | |
10263 1.38629 1.38629 1.38629 1.38629 | |
10264 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10265 6 3.16710 2.64497 3.21222 0.16653 6 - - | |
10266 1.38629 1.38629 1.38629 1.38629 | |
10267 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10268 7 3.16710 2.64497 3.21222 0.16653 7 - - | |
10269 1.38629 1.38629 1.38629 1.38629 | |
10270 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10271 8 3.52168 0.12012 3.56730 2.89304 8 - - | |
10272 1.38629 1.38629 1.38629 1.38629 | |
10273 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10274 9 0.13213 3.45734 2.85176 3.36640 9 - - | |
10275 1.38629 1.38629 1.38629 1.38629 | |
10276 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10277 10 3.00056 3.66536 0.10901 3.57823 10 - - | |
10278 1.38629 1.38629 1.38629 1.38629 | |
10279 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10280 11 2.46586 0.76758 2.53784 0.98915 11 - - | |
10281 1.38629 1.38629 1.38629 1.38629 | |
10282 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10283 12 3.00056 3.66536 0.10901 3.57823 12 - - | |
10284 1.38629 1.38629 1.38629 1.38629 | |
10285 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10286 13 0.13213 3.45734 2.85176 3.36640 13 - - | |
10287 1.38629 1.38629 1.38629 1.38629 | |
10288 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10289 14 3.16710 2.64497 3.21222 0.16653 14 - - | |
10290 1.38629 1.38629 1.38629 1.38629 | |
10291 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10292 15 3.00056 3.66536 0.10901 3.57823 15 - - | |
10293 1.38629 1.38629 1.38629 1.38629 | |
10294 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10295 16 3.00056 3.66536 0.10901 3.57823 16 - - | |
10296 1.38629 1.38629 1.38629 1.38629 | |
10297 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10298 17 0.13213 3.45734 2.85176 3.36640 17 - - | |
10299 1.38629 1.38629 1.38629 1.38629 | |
10300 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10301 18 3.16710 2.64497 3.21222 0.16653 18 - - | |
10302 1.38629 1.38629 1.38629 1.38629 | |
10303 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10304 19 0.21940 3.16112 2.23213 3.05081 19 - - | |
10305 1.38629 1.38629 1.38629 1.38629 | |
10306 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10307 20 3.16710 2.64497 3.21222 0.16653 20 - - | |
10308 1.38629 1.38629 1.38629 1.38629 | |
10309 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10310 21 3.52168 0.12012 3.56730 2.89304 21 - - | |
10311 1.38629 1.38629 1.38629 1.38629 | |
10312 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10313 22 3.16710 2.64497 3.21222 0.16653 22 - - | |
10314 1.38629 1.38629 1.38629 1.38629 | |
10315 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10316 23 3.16710 2.64497 3.21222 0.16653 23 - - | |
10317 1.38629 1.38629 1.38629 1.38629 | |
10318 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10319 24 3.00056 3.66536 0.10901 3.57823 24 - - | |
10320 1.38629 1.38629 1.38629 1.38629 | |
10321 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10322 25 3.00056 3.66536 0.10901 3.57823 25 - - | |
10323 1.38629 1.38629 1.38629 1.38629 | |
10324 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10325 26 3.52168 0.12012 3.56730 2.89304 26 - - | |
10326 1.38629 1.38629 1.38629 1.38629 | |
10327 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10328 27 3.16710 2.64497 3.21222 0.16653 27 - - | |
10329 1.38629 1.38629 1.38629 1.38629 | |
10330 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10331 28 3.52168 0.12012 3.56730 2.89304 28 - - | |
10332 1.38629 1.38629 1.38629 1.38629 | |
10333 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10334 29 2.32922 3.31349 0.19164 3.20305 29 - - | |
10335 1.38629 1.38629 1.38629 1.38629 | |
10336 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10337 30 2.32922 3.31349 0.19164 3.20305 30 - - | |
10338 1.38629 1.38629 1.38629 1.38629 | |
10339 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10340 31 3.00056 3.66536 0.10901 3.57823 31 - - | |
10341 1.38629 1.38629 1.38629 1.38629 | |
10342 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10343 32 3.52168 0.12012 3.56730 2.89304 32 - - | |
10344 1.38629 1.38629 1.38629 1.38629 | |
10345 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10346 33 0.13213 3.45734 2.85176 3.36640 33 - - | |
10347 1.38629 1.38629 1.38629 1.38629 | |
10348 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10349 34 3.52168 0.12012 3.56730 2.89304 34 - - | |
10350 1.38629 1.38629 1.38629 1.38629 | |
10351 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10352 35 3.52168 0.12012 3.56730 2.89304 35 - - | |
10353 1.38629 1.38629 1.38629 1.38629 | |
10354 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10355 36 3.16710 2.64497 3.21222 0.16653 36 - - | |
10356 1.38629 1.38629 1.38629 1.38629 | |
10357 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10358 37 2.31883 2.50191 0.47001 1.63638 37 - - | |
10359 1.38629 1.38629 1.38629 1.38629 | |
10360 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10361 38 3.16710 2.64497 3.21222 0.16653 38 - - | |
10362 1.38629 1.38629 1.38629 1.38629 | |
10363 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10364 39 3.00056 3.66536 0.10901 3.57823 39 - - | |
10365 1.38629 1.38629 1.38629 1.38629 | |
10366 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10367 40 0.13213 3.45734 2.85176 3.36640 40 - - | |
10368 1.38629 1.38629 1.38629 1.38629 | |
10369 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10370 41 0.13213 3.45734 2.85176 3.36640 41 - - | |
10371 1.38629 1.38629 1.38629 1.38629 | |
10372 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10373 42 3.00056 3.66536 0.10901 3.57823 42 - - | |
10374 1.38629 1.38629 1.38629 1.38629 | |
10375 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10376 43 3.00056 3.66536 0.10901 3.57823 43 - - | |
10377 1.38629 1.38629 1.38629 1.38629 | |
10378 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10379 44 3.00056 3.66536 0.10901 3.57823 44 - - | |
10380 1.38629 1.38629 1.38629 1.38629 | |
10381 0.03525 4.05588 4.05588 1.46634 0.26236 1.09861 0.40547 | |
10382 45 3.52168 0.12012 3.56730 2.89304 45 - - | |
10383 1.38629 1.38629 1.38629 1.38629 | |
10384 0.01778 4.03841 * 1.46634 0.26236 0.00000 * | |
10385 // | |
10386 HMMER3/b [3.0 | March 2010] | |
10387 NAME 2_5.8_Alveolata_58S_start_twod_long | |
10388 LENG 45 | |
10389 ALPH DNA | |
10390 RF no | |
10391 CS no | |
10392 MAP yes | |
10393 DATE Wed Feb 29 13:25:53 2012 | |
10394 NSEQ 12 | |
10395 EFFN 3.430664 | |
10396 CKSUM 3640048188 | |
10397 STATS LOCAL MSV -7.2425 0.71931 | |
10398 STATS LOCAL VITERBI -7.5607 0.71931 | |
10399 STATS LOCAL FORWARD -3.7783 0.71931 | |
10400 HMM A C G T | |
10401 m->m m->i m->d i->m i->i d->m d->d | |
10402 COMPO 1.41933 1.31164 1.25837 1.58655 | |
10403 1.38629 1.38629 1.38629 1.38629 | |
10404 0.03617 4.03081 4.03081 1.46634 0.26236 0.00000 * | |
10405 1 3.47220 0.12564 3.51998 2.85737 1 - - | |
10406 1.38629 1.38629 1.38629 1.38629 | |
10407 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10408 2 0.13749 3.41422 2.82393 3.31912 2 - - | |
10409 1.38629 1.38629 1.38629 1.38629 | |
10410 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10411 3 0.13749 3.41422 2.82393 3.31912 3 - - | |
10412 1.38629 1.38629 1.38629 1.38629 | |
10413 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10414 4 3.47220 0.12564 3.51998 2.85737 4 - - | |
10415 1.38629 1.38629 1.38629 1.38629 | |
10416 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10417 5 3.12302 2.61701 3.16985 0.17323 5 - - | |
10418 1.38629 1.38629 1.38629 1.38629 | |
10419 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10420 6 3.12302 2.61701 3.16985 0.17323 6 - - | |
10421 1.38629 1.38629 1.38629 1.38629 | |
10422 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10423 7 3.12302 2.61701 3.16985 0.17323 7 - - | |
10424 1.38629 1.38629 1.38629 1.38629 | |
10425 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10426 8 3.47220 0.12564 3.51998 2.85737 8 - - | |
10427 1.38629 1.38629 1.38629 1.38629 | |
10428 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10429 9 0.13749 3.41422 2.82393 3.31912 9 - - | |
10430 1.38629 1.38629 1.38629 1.38629 | |
10431 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10432 10 2.97107 3.62210 0.11347 3.53036 10 - - | |
10433 1.38629 1.38629 1.38629 1.38629 | |
10434 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10435 11 3.47220 0.12564 3.51998 2.85737 11 - - | |
10436 1.38629 1.38629 1.38629 1.38629 | |
10437 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10438 12 2.97107 3.62210 0.11347 3.53036 12 - - | |
10439 1.38629 1.38629 1.38629 1.38629 | |
10440 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10441 13 0.13749 3.41422 2.82393 3.31912 13 - - | |
10442 1.38629 1.38629 1.38629 1.38629 | |
10443 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10444 14 3.47220 0.12564 3.51998 2.85737 14 - - | |
10445 1.38629 1.38629 1.38629 1.38629 | |
10446 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10447 15 2.97107 3.62210 0.11347 3.53036 15 - - | |
10448 1.38629 1.38629 1.38629 1.38629 | |
10449 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10450 16 2.97107 3.62210 0.11347 3.53036 16 - - | |
10451 1.38629 1.38629 1.38629 1.38629 | |
10452 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10453 17 0.13749 3.41422 2.82393 3.31912 17 - - | |
10454 1.38629 1.38629 1.38629 1.38629 | |
10455 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10456 18 3.12302 2.61701 3.16985 0.17323 18 - - | |
10457 1.38629 1.38629 1.38629 1.38629 | |
10458 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10459 19 0.13749 3.41422 2.82393 3.31912 19 - - | |
10460 1.38629 1.38629 1.38629 1.38629 | |
10461 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10462 20 3.12302 2.61701 3.16985 0.17323 20 - - | |
10463 1.38629 1.38629 1.38629 1.38629 | |
10464 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10465 21 3.47220 0.12564 3.51998 2.85737 21 - - | |
10466 1.38629 1.38629 1.38629 1.38629 | |
10467 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10468 22 3.12302 2.61701 3.16985 0.17323 22 - - | |
10469 1.38629 1.38629 1.38629 1.38629 | |
10470 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10471 23 2.60677 1.53439 2.67234 0.44387 23 - - | |
10472 1.38629 1.38629 1.38629 1.38629 | |
10473 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10474 24 2.97107 3.62210 0.11347 3.53036 24 - - | |
10475 1.38629 1.38629 1.38629 1.38629 | |
10476 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10477 25 2.97107 3.62210 0.11347 3.53036 25 - - | |
10478 1.38629 1.38629 1.38629 1.38629 | |
10479 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10480 26 3.47220 0.12564 3.51998 2.85737 26 - - | |
10481 1.38629 1.38629 1.38629 1.38629 | |
10482 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10483 27 3.12302 2.61701 3.16985 0.17323 27 - - | |
10484 1.38629 1.38629 1.38629 1.38629 | |
10485 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10486 28 3.47220 0.12564 3.51998 2.85737 28 - - | |
10487 1.38629 1.38629 1.38629 1.38629 | |
10488 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10489 29 1.96943 3.04589 0.27579 2.91993 29 - - | |
10490 1.38629 1.38629 1.38629 1.38629 | |
10491 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10492 30 2.97107 3.62210 0.11347 3.53036 30 - - | |
10493 1.38629 1.38629 1.38629 1.38629 | |
10494 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10495 31 2.97107 3.62210 0.11347 3.53036 31 - - | |
10496 1.38629 1.38629 1.38629 1.38629 | |
10497 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10498 32 3.47220 0.12564 3.51998 2.85737 32 - - | |
10499 1.38629 1.38629 1.38629 1.38629 | |
10500 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10501 33 0.13749 3.41422 2.82393 3.31912 33 - - | |
10502 1.38629 1.38629 1.38629 1.38629 | |
10503 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10504 34 3.47220 0.12564 3.51998 2.85737 34 - - | |
10505 1.38629 1.38629 1.38629 1.38629 | |
10506 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10507 35 3.47220 0.12564 3.51998 2.85737 35 - - | |
10508 1.38629 1.38629 1.38629 1.38629 | |
10509 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10510 36 0.55266 2.36283 2.26915 1.48267 36 - - | |
10511 1.38629 1.38629 1.38629 1.38629 | |
10512 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10513 37 0.13749 3.41422 2.82393 3.31912 37 - - | |
10514 1.38629 1.38629 1.38629 1.38629 | |
10515 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10516 38 3.12302 2.61701 3.16985 0.17323 38 - - | |
10517 1.38629 1.38629 1.38629 1.38629 | |
10518 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10519 39 2.97107 3.62210 0.11347 3.53036 39 - - | |
10520 1.38629 1.38629 1.38629 1.38629 | |
10521 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10522 40 0.13749 3.41422 2.82393 3.31912 40 - - | |
10523 1.38629 1.38629 1.38629 1.38629 | |
10524 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10525 41 0.13749 3.41422 2.82393 3.31912 41 - - | |
10526 1.38629 1.38629 1.38629 1.38629 | |
10527 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10528 42 2.97107 3.62210 0.11347 3.53036 42 - - | |
10529 1.38629 1.38629 1.38629 1.38629 | |
10530 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10531 43 2.97107 3.62210 0.11347 3.53036 43 - - | |
10532 1.38629 1.38629 1.38629 1.38629 | |
10533 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10534 44 2.97107 3.62210 0.11347 3.53036 44 - - | |
10535 1.38629 1.38629 1.38629 1.38629 | |
10536 0.03617 4.03081 4.03081 1.46634 0.26236 1.09861 0.40547 | |
10537 45 3.47220 0.12564 3.51998 2.85737 45 - - | |
10538 1.38629 1.38629 1.38629 1.38629 | |
10539 0.01825 4.01289 * 1.46634 0.26236 0.00000 * | |
10540 // | |
10541 HMMER3/b [3.0 | March 2010] | |
10542 NAME 4_LSU_Alveolata_4_LSU_start_elevena_long | |
10543 LENG 45 | |
10544 ALPH DNA | |
10545 RF no | |
10546 CS no | |
10547 MAP yes | |
10548 DATE Thu Mar 1 14:41:31 2012 | |
10549 NSEQ 12 | |
10550 EFFN 3.272461 | |
10551 CKSUM 1146151681 | |
10552 STATS LOCAL MSV -8.0339 0.71932 | |
10553 STATS LOCAL VITERBI -7.7952 0.71932 | |
10554 STATS LOCAL FORWARD -4.0279 0.71932 | |
10555 HMM A C G T | |
10556 m->m m->i m->d i->m i->i d->m d->d | |
10557 COMPO 1.47342 1.38843 1.32140 1.36794 | |
10558 1.38629 1.38629 1.38629 1.38629 | |
10559 0.03723 4.00231 4.00231 1.46634 0.26236 0.00000 * | |
10560 1 3.07227 2.58474 3.12105 0.18133 1 - - | |
10561 1.38629 1.38629 1.38629 1.38629 | |
10562 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10563 2 3.07227 2.58474 3.12105 0.18133 2 - - | |
10564 1.38629 1.38629 1.38629 1.38629 | |
10565 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10566 3 3.07227 2.58474 3.12105 0.18133 3 - - | |
10567 1.38629 1.38629 1.38629 1.38629 | |
10568 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10569 4 2.93618 3.57128 0.11898 3.47424 4 - - | |
10570 1.38629 1.38629 1.38629 1.38629 | |
10571 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10572 5 3.41441 0.13246 3.46466 2.81537 5 - - | |
10573 1.38629 1.38629 1.38629 1.38629 | |
10574 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10575 6 3.07227 2.58474 3.12105 0.18133 6 - - | |
10576 1.38629 1.38629 1.38629 1.38629 | |
10577 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10578 7 3.41441 0.13246 3.46466 2.81537 7 - - | |
10579 1.38629 1.38629 1.38629 1.38629 | |
10580 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10581 8 3.41441 0.13246 3.46466 2.81537 8 - - | |
10582 1.38629 1.38629 1.38629 1.38629 | |
10583 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10584 9 3.07227 2.58474 3.12105 0.18133 9 - - | |
10585 1.38629 1.38629 1.38629 1.38629 | |
10586 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10587 10 2.93618 3.57128 0.11898 3.47424 10 - - | |
10588 1.38629 1.38629 1.38629 1.38629 | |
10589 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10590 11 0.14405 3.36405 2.79138 3.26418 11 - - | |
10591 1.38629 1.38629 1.38629 1.38629 | |
10592 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10593 12 2.93618 3.57128 0.11898 3.47424 12 - - | |
10594 1.38629 1.38629 1.38629 1.38629 | |
10595 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10596 13 0.14405 3.36405 2.79138 3.26418 13 - - | |
10597 1.38629 1.38629 1.38629 1.38629 | |
10598 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10599 14 3.07227 2.58474 3.12105 0.18133 14 - - | |
10600 1.38629 1.38629 1.38629 1.38629 | |
10601 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10602 15 3.41441 0.13246 3.46466 2.81537 15 - - | |
10603 1.38629 1.38629 1.38629 1.38629 | |
10604 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10605 16 2.93618 3.57128 0.11898 3.47424 16 - - | |
10606 1.38629 1.38629 1.38629 1.38629 | |
10607 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10608 17 2.37276 3.26979 0.19096 3.15593 17 - - | |
10609 1.38629 1.38629 1.38629 1.38629 | |
10610 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10611 18 2.93618 3.57128 0.11898 3.47424 18 - - | |
10612 1.38629 1.38629 1.38629 1.38629 | |
10613 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10614 19 3.07227 2.58474 3.12105 0.18133 19 - - | |
10615 1.38629 1.38629 1.38629 1.38629 | |
10616 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10617 20 2.93618 3.57128 0.11898 3.47424 20 - - | |
10618 1.38629 1.38629 1.38629 1.38629 | |
10619 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10620 21 0.14405 3.36405 2.79138 3.26418 21 - - | |
10621 1.38629 1.38629 1.38629 1.38629 | |
10622 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10623 22 2.93618 3.57128 0.11898 3.47424 22 - - | |
10624 1.38629 1.38629 1.38629 1.38629 | |
10625 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10626 23 2.93618 3.57128 0.11898 3.47424 23 - - | |
10627 1.38629 1.38629 1.38629 1.38629 | |
10628 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10629 24 3.41441 0.13246 3.46466 2.81537 24 - - | |
10630 1.38629 1.38629 1.38629 1.38629 | |
10631 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10632 25 3.41441 0.13246 3.46466 2.81537 25 - - | |
10633 1.38629 1.38629 1.38629 1.38629 | |
10634 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10635 26 0.14405 3.36405 2.79138 3.26418 26 - - | |
10636 1.38629 1.38629 1.38629 1.38629 | |
10637 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10638 27 3.07227 2.58474 3.12105 0.18133 27 - - | |
10639 1.38629 1.38629 1.38629 1.38629 | |
10640 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10641 28 3.41441 0.13246 3.46466 2.81537 28 - - | |
10642 1.38629 1.38629 1.38629 1.38629 | |
10643 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10644 29 3.41441 0.13246 3.46466 2.81537 29 - - | |
10645 1.38629 1.38629 1.38629 1.38629 | |
10646 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10647 30 2.93618 3.57128 0.11898 3.47424 30 - - | |
10648 1.38629 1.38629 1.38629 1.38629 | |
10649 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10650 31 3.41441 0.13246 3.46466 2.81537 31 - - | |
10651 1.38629 1.38629 1.38629 1.38629 | |
10652 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10653 32 3.41441 0.13246 3.46466 2.81537 32 - - | |
10654 1.38629 1.38629 1.38629 1.38629 | |
10655 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10656 33 2.93618 3.57128 0.11898 3.47424 33 - - | |
10657 1.38629 1.38629 1.38629 1.38629 | |
10658 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10659 34 0.14405 3.36405 2.79138 3.26418 34 - - | |
10660 1.38629 1.38629 1.38629 1.38629 | |
10661 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10662 35 0.14405 3.36405 2.79138 3.26418 35 - - | |
10663 1.38629 1.38629 1.38629 1.38629 | |
10664 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10665 36 3.07227 2.58474 3.12105 0.18133 36 - - | |
10666 1.38629 1.38629 1.38629 1.38629 | |
10667 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10668 37 3.07227 2.58474 3.12105 0.18133 37 - - | |
10669 1.38629 1.38629 1.38629 1.38629 | |
10670 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10671 38 3.07227 2.58474 3.12105 0.18133 38 - - | |
10672 1.38629 1.38629 1.38629 1.38629 | |
10673 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10674 39 0.14405 3.36405 2.79138 3.26418 39 - - | |
10675 1.38629 1.38629 1.38629 1.38629 | |
10676 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10677 40 0.14405 3.36405 2.79138 3.26418 40 - - | |
10678 1.38629 1.38629 1.38629 1.38629 | |
10679 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10680 41 2.93618 3.57128 0.11898 3.47424 41 - - | |
10681 1.38629 1.38629 1.38629 1.38629 | |
10682 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10683 42 3.41441 0.13246 3.46466 2.81537 42 - - | |
10684 1.38629 1.38629 1.38629 1.38629 | |
10685 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10686 43 0.14405 3.36405 2.79138 3.26418 43 - - | |
10687 1.38629 1.38629 1.38629 1.38629 | |
10688 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10689 44 3.07227 2.58474 3.12105 0.18133 44 - - | |
10690 1.38629 1.38629 1.38629 1.38629 | |
10691 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 | |
10692 45 0.14405 3.36405 2.79138 3.26418 45 - - | |
10693 1.38629 1.38629 1.38629 1.38629 | |
10694 0.01879 3.98387 * 1.46634 0.26236 0.00000 * | |
10695 // | |
10696 HMMER3/b [3.0 | March 2010] | |
10697 NAME 4_LSU_Alveolata_4_LSU_start_elevenb_long | |
10698 LENG 45 | |
10699 ALPH DNA | |
10700 RF no | |
10701 CS no | |
10702 MAP yes | |
10703 DATE Thu Mar 1 14:41:38 2012 | |
10704 NSEQ 7 | |
10705 EFFN 3.749512 | |
10706 CKSUM 2366441104 | |
10707 STATS LOCAL MSV -7.0652 0.71931 | |
10708 STATS LOCAL VITERBI -7.5685 0.71931 | |
10709 STATS LOCAL FORWARD -4.4492 0.71931 | |
10710 HMM A C G T | |
10711 m->m m->i m->d i->m i->i d->m d->d | |
10712 COMPO 1.38524 1.47412 1.40056 1.29354 | |
10713 1.38629 1.38629 1.38629 1.38629 | |
10714 0.03419 4.08589 4.08589 1.46634 0.26236 0.00000 * | |
10715 1 1.79493 1.75931 2.34666 0.56914 1 - - | |
10716 1.38629 1.38629 1.38629 1.38629 | |
10717 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10718 2 2.88109 1.92354 2.93805 0.29455 2 - - | |
10719 1.38629 1.38629 1.38629 1.38629 | |
10720 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10721 3 2.49444 0.76834 2.56603 0.97594 3 - - | |
10722 1.38629 1.38629 1.38629 1.38629 | |
10723 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10724 4 2.27102 2.42071 0.55082 1.46337 4 - - | |
10725 1.38629 1.38629 1.38629 1.38629 | |
10726 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10727 5 3.57922 0.11406 3.62226 2.93422 5 - - | |
10728 1.38629 1.38629 1.38629 1.38629 | |
10729 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10730 6 3.21913 2.67796 3.26222 0.15899 6 - - | |
10731 1.38629 1.38629 1.38629 1.38629 | |
10732 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10733 7 3.57922 0.11406 3.62226 2.93422 7 - - | |
10734 1.38629 1.38629 1.38629 1.38629 | |
10735 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10736 8 3.57922 0.11406 3.62226 2.93422 8 - - | |
10737 1.38629 1.38629 1.38629 1.38629 | |
10738 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10739 9 3.21913 2.67796 3.26222 0.15899 9 - - | |
10740 1.38629 1.38629 1.38629 1.38629 | |
10741 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10742 10 3.03446 3.71539 0.10410 3.63368 10 - - | |
10743 1.38629 1.38629 1.38629 1.38629 | |
10744 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10745 11 0.12616 3.50768 2.88414 3.42167 11 - - | |
10746 1.38629 1.38629 1.38629 1.38629 | |
10747 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10748 12 0.12616 3.50768 2.88414 3.42167 12 - - | |
10749 1.38629 1.38629 1.38629 1.38629 | |
10750 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10751 13 0.12616 3.50768 2.88414 3.42167 13 - - | |
10752 1.38629 1.38629 1.38629 1.38629 | |
10753 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10754 14 3.21913 2.67796 3.26222 0.15899 14 - - | |
10755 1.38629 1.38629 1.38629 1.38629 | |
10756 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10757 15 3.57922 0.11406 3.62226 2.93422 15 - - | |
10758 1.38629 1.38629 1.38629 1.38629 | |
10759 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10760 16 3.03446 3.71539 0.10410 3.63368 16 - - | |
10761 1.38629 1.38629 1.38629 1.38629 | |
10762 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10763 17 3.03446 3.71539 0.10410 3.63368 17 - - | |
10764 1.38629 1.38629 1.38629 1.38629 | |
10765 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10766 18 3.03446 3.71539 0.10410 3.63368 18 - - | |
10767 1.38629 1.38629 1.38629 1.38629 | |
10768 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10769 19 3.21913 2.67796 3.26222 0.15899 19 - - | |
10770 1.38629 1.38629 1.38629 1.38629 | |
10771 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10772 20 3.03446 3.71539 0.10410 3.63368 20 - - | |
10773 1.38629 1.38629 1.38629 1.38629 | |
10774 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10775 21 0.12616 3.50768 2.88414 3.42167 21 - - | |
10776 1.38629 1.38629 1.38629 1.38629 | |
10777 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10778 22 3.03446 3.71539 0.10410 3.63368 22 - - | |
10779 1.38629 1.38629 1.38629 1.38629 | |
10780 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10781 23 3.03446 3.71539 0.10410 3.63368 23 - - | |
10782 1.38629 1.38629 1.38629 1.38629 | |
10783 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10784 24 3.57922 0.11406 3.62226 2.93422 24 - - | |
10785 1.38629 1.38629 1.38629 1.38629 | |
10786 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10787 25 3.21913 2.67796 3.26222 0.15899 25 - - | |
10788 1.38629 1.38629 1.38629 1.38629 | |
10789 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10790 26 0.12616 3.50768 2.88414 3.42167 26 - - | |
10791 1.38629 1.38629 1.38629 1.38629 | |
10792 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10793 27 3.21913 2.67796 3.26222 0.15899 27 - - | |
10794 1.38629 1.38629 1.38629 1.38629 | |
10795 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10796 28 3.57922 0.11406 3.62226 2.93422 28 - - | |
10797 1.38629 1.38629 1.38629 1.38629 | |
10798 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10799 29 3.57922 0.11406 3.62226 2.93422 29 - - | |
10800 1.38629 1.38629 1.38629 1.38629 | |
10801 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10802 30 3.03446 3.71539 0.10410 3.63368 30 - - | |
10803 1.38629 1.38629 1.38629 1.38629 | |
10804 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10805 31 3.57922 0.11406 3.62226 2.93422 31 - - | |
10806 1.38629 1.38629 1.38629 1.38629 | |
10807 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10808 32 3.21913 2.67796 3.26222 0.15899 32 - - | |
10809 1.38629 1.38629 1.38629 1.38629 | |
10810 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10811 33 3.03446 3.71539 0.10410 3.63368 33 - - | |
10812 1.38629 1.38629 1.38629 1.38629 | |
10813 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10814 34 0.12616 3.50768 2.88414 3.42167 34 - - | |
10815 1.38629 1.38629 1.38629 1.38629 | |
10816 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10817 35 0.12616 3.50768 2.88414 3.42167 35 - - | |
10818 1.38629 1.38629 1.38629 1.38629 | |
10819 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10820 36 3.21913 2.67796 3.26222 0.15899 36 - - | |
10821 1.38629 1.38629 1.38629 1.38629 | |
10822 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10823 37 3.21913 2.67796 3.26222 0.15899 37 - - | |
10824 1.38629 1.38629 1.38629 1.38629 | |
10825 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10826 38 3.21913 2.67796 3.26222 0.15899 38 - - | |
10827 1.38629 1.38629 1.38629 1.38629 | |
10828 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10829 39 0.12616 3.50768 2.88414 3.42167 39 - - | |
10830 1.38629 1.38629 1.38629 1.38629 | |
10831 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10832 40 0.12616 3.50768 2.88414 3.42167 40 - - | |
10833 1.38629 1.38629 1.38629 1.38629 | |
10834 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10835 41 3.03446 3.71539 0.10410 3.63368 41 - - | |
10836 1.38629 1.38629 1.38629 1.38629 | |
10837 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10838 42 3.57922 0.11406 3.62226 2.93422 42 - - | |
10839 1.38629 1.38629 1.38629 1.38629 | |
10840 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10841 43 0.12616 3.50768 2.88414 3.42167 43 - - | |
10842 1.38629 1.38629 1.38629 1.38629 | |
10843 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10844 44 3.21913 2.67796 3.26222 0.15899 44 - - | |
10845 1.38629 1.38629 1.38629 1.38629 | |
10846 0.03419 4.08589 4.08589 1.46634 0.26236 1.09861 0.40547 | |
10847 45 0.12616 3.50768 2.88414 3.42167 45 - - | |
10848 1.38629 1.38629 1.38629 1.38629 | |
10849 0.01724 4.06894 * 1.46634 0.26236 0.00000 * | |
10850 // | |
10851 HMMER3/b [3.0 | March 2010] | |
10852 NAME 4_LSU_Alveolata_4_LSU_start_elevenc_long | |
10853 LENG 45 | |
10854 ALPH DNA | |
10855 RF no | |
10856 CS no | |
10857 MAP yes | |
10858 DATE Thu Mar 1 14:41:44 2012 | |
10859 NSEQ 2 | |
10860 EFFN 2.000000 | |
10861 CKSUM 4069155507 | |
10862 STATS LOCAL MSV -7.5533 0.72843 | |
10863 STATS LOCAL VITERBI -8.3163 0.72843 | |
10864 STATS LOCAL FORWARD -3.8936 0.72843 | |
10865 HMM A C G T | |
10866 m->m m->i m->d i->m i->i d->m d->d | |
10867 COMPO 1.45663 1.50989 1.37466 1.22718 | |
10868 1.38629 1.38629 1.38629 1.38629 | |
10869 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
10870 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
10871 1.38629 1.38629 1.38629 1.38629 | |
10872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10873 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
10874 1.38629 1.38629 1.38629 1.38629 | |
10875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10876 3 2.57915 2.25909 2.64442 0.28946 3 - - | |
10877 1.38629 1.38629 1.38629 1.38629 | |
10878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10879 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
10880 1.38629 1.38629 1.38629 1.38629 | |
10881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10882 5 2.81865 0.23582 2.88868 2.35662 5 - - | |
10883 1.38629 1.38629 1.38629 1.38629 | |
10884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10885 6 2.57915 2.25909 2.64442 0.28946 6 - - | |
10886 1.38629 1.38629 1.38629 1.38629 | |
10887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10888 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
10889 1.38629 1.38629 1.38629 1.38629 | |
10890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10891 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
10892 1.38629 1.38629 1.38629 1.38629 | |
10893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10894 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
10895 1.38629 1.38629 1.38629 1.38629 | |
10896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10897 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
10898 1.38629 1.38629 1.38629 1.38629 | |
10899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10900 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
10901 1.38629 1.38629 1.38629 1.38629 | |
10902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10903 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
10904 1.38629 1.38629 1.38629 1.38629 | |
10905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10906 13 0.23862 2.84929 2.43386 2.70756 13 - - | |
10907 1.38629 1.38629 1.38629 1.38629 | |
10908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10909 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
10910 1.38629 1.38629 1.38629 1.38629 | |
10911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10912 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
10913 1.38629 1.38629 1.38629 1.38629 | |
10914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10915 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
10916 1.38629 1.38629 1.38629 1.38629 | |
10917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10918 17 2.53331 3.02441 0.20344 2.88069 17 - - | |
10919 1.38629 1.38629 1.38629 1.38629 | |
10920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10921 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
10922 1.38629 1.38629 1.38629 1.38629 | |
10923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10924 19 2.57915 2.25909 2.64442 0.28946 19 - - | |
10925 1.38629 1.38629 1.38629 1.38629 | |
10926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10927 20 2.53331 3.02441 0.20344 2.88069 20 - - | |
10928 1.38629 1.38629 1.38629 1.38629 | |
10929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10930 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
10931 1.38629 1.38629 1.38629 1.38629 | |
10932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10933 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
10934 1.38629 1.38629 1.38629 1.38629 | |
10935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10936 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
10937 1.38629 1.38629 1.38629 1.38629 | |
10938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10939 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
10940 1.38629 1.38629 1.38629 1.38629 | |
10941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10942 25 2.57915 2.25909 2.64442 0.28946 25 - - | |
10943 1.38629 1.38629 1.38629 1.38629 | |
10944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10945 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
10946 1.38629 1.38629 1.38629 1.38629 | |
10947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10948 27 2.57915 2.25909 2.64442 0.28946 27 - - | |
10949 1.38629 1.38629 1.38629 1.38629 | |
10950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10951 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
10952 1.38629 1.38629 1.38629 1.38629 | |
10953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10954 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
10955 1.38629 1.38629 1.38629 1.38629 | |
10956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10957 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
10958 1.38629 1.38629 1.38629 1.38629 | |
10959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10960 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
10961 1.38629 1.38629 1.38629 1.38629 | |
10962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10963 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
10964 1.38629 1.38629 1.38629 1.38629 | |
10965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10966 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
10967 1.38629 1.38629 1.38629 1.38629 | |
10968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10969 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
10970 1.38629 1.38629 1.38629 1.38629 | |
10971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10972 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
10973 1.38629 1.38629 1.38629 1.38629 | |
10974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10975 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
10976 1.38629 1.38629 1.38629 1.38629 | |
10977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10978 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
10979 1.38629 1.38629 1.38629 1.38629 | |
10980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10981 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
10982 1.38629 1.38629 1.38629 1.38629 | |
10983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10984 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
10985 1.38629 1.38629 1.38629 1.38629 | |
10986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10987 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
10988 1.38629 1.38629 1.38629 1.38629 | |
10989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10990 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
10991 1.38629 1.38629 1.38629 1.38629 | |
10992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10993 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
10994 1.38629 1.38629 1.38629 1.38629 | |
10995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10996 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
10997 1.38629 1.38629 1.38629 1.38629 | |
10998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
10999 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
11000 1.38629 1.38629 1.38629 1.38629 | |
11001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11002 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
11003 1.38629 1.38629 1.38629 1.38629 | |
11004 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
11005 // | |
11006 HMMER3/b [3.0 | March 2010] | |
11007 NAME 4_LSU_Alveolata_4_LSU_start_elevend_long | |
11008 LENG 45 | |
11009 ALPH DNA | |
11010 RF no | |
11011 CS no | |
11012 MAP yes | |
11013 DATE Thu Mar 1 14:41:50 2012 | |
11014 NSEQ 6 | |
11015 EFFN 3.483398 | |
11016 CKSUM 493634052 | |
11017 STATS LOCAL MSV -7.4999 0.71933 | |
11018 STATS LOCAL VITERBI -7.8190 0.71933 | |
11019 STATS LOCAL FORWARD -4.2484 0.71933 | |
11020 HMM A C G T | |
11021 m->m m->i m->d i->m i->i d->m d->d | |
11022 COMPO 1.28412 1.78988 1.37130 1.19617 | |
11023 1.38629 1.38629 1.38629 1.38629 | |
11024 0.03582 4.04013 4.04013 1.46634 0.26236 0.00000 * | |
11025 1 3.13947 2.62745 3.18567 0.17069 1 - - | |
11026 1.38629 1.38629 1.38629 1.38629 | |
11027 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11028 2 3.13947 2.62745 3.18567 0.17069 2 - - | |
11029 1.38629 1.38629 1.38629 1.38629 | |
11030 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11031 3 0.38809 2.59438 2.41106 1.84999 3 - - | |
11032 1.38629 1.38629 1.38629 1.38629 | |
11033 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11034 4 3.13947 2.62745 3.18567 0.17069 4 - - | |
11035 1.38629 1.38629 1.38629 1.38629 | |
11036 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11037 5 2.98216 3.63834 0.11177 3.54832 5 - - | |
11038 1.38629 1.38629 1.38629 1.38629 | |
11039 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11040 6 2.98216 3.63834 0.11177 3.54832 6 - - | |
11041 1.38629 1.38629 1.38629 1.38629 | |
11042 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11043 7 3.49075 0.12354 3.53772 2.87077 7 - - | |
11044 1.38629 1.38629 1.38629 1.38629 | |
11045 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11046 8 3.49075 0.12354 3.53772 2.87077 8 - - | |
11047 1.38629 1.38629 1.38629 1.38629 | |
11048 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11049 9 3.13947 2.62745 3.18567 0.17069 9 - - | |
11050 1.38629 1.38629 1.38629 1.38629 | |
11051 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11052 10 2.98216 3.63834 0.11177 3.54832 10 - - | |
11053 1.38629 1.38629 1.38629 1.38629 | |
11054 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11055 11 0.13545 3.43036 2.83437 3.33682 11 - - | |
11056 1.38629 1.38629 1.38629 1.38629 | |
11057 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11058 12 0.13545 3.43036 2.83437 3.33682 12 - - | |
11059 1.38629 1.38629 1.38629 1.38629 | |
11060 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11061 13 0.13545 3.43036 2.83437 3.33682 13 - - | |
11062 1.38629 1.38629 1.38629 1.38629 | |
11063 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11064 14 3.13947 2.62745 3.18567 0.17069 14 - - | |
11065 1.38629 1.38629 1.38629 1.38629 | |
11066 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11067 15 3.13947 2.62745 3.18567 0.17069 15 - - | |
11068 1.38629 1.38629 1.38629 1.38629 | |
11069 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11070 16 2.98216 3.63834 0.11177 3.54832 16 - - | |
11071 1.38629 1.38629 1.38629 1.38629 | |
11072 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11073 17 2.98216 3.63834 0.11177 3.54832 17 - - | |
11074 1.38629 1.38629 1.38629 1.38629 | |
11075 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11076 18 0.13545 3.43036 2.83437 3.33682 18 - - | |
11077 1.38629 1.38629 1.38629 1.38629 | |
11078 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11079 19 3.13947 2.62745 3.18567 0.17069 19 - - | |
11080 1.38629 1.38629 1.38629 1.38629 | |
11081 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11082 20 2.98216 3.63834 0.11177 3.54832 20 - - | |
11083 1.38629 1.38629 1.38629 1.38629 | |
11084 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11085 21 3.13947 2.62745 3.18567 0.17069 21 - - | |
11086 1.38629 1.38629 1.38629 1.38629 | |
11087 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11088 22 2.98216 3.63834 0.11177 3.54832 22 - - | |
11089 1.38629 1.38629 1.38629 1.38629 | |
11090 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11091 23 0.13545 3.43036 2.83437 3.33682 23 - - | |
11092 1.38629 1.38629 1.38629 1.38629 | |
11093 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11094 24 2.76674 1.82415 2.82709 0.33325 24 - - | |
11095 1.38629 1.38629 1.38629 1.38629 | |
11096 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11097 25 2.98216 3.63834 0.11177 3.54832 25 - - | |
11098 1.38629 1.38629 1.38629 1.38629 | |
11099 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11100 26 0.13545 3.43036 2.83437 3.33682 26 - - | |
11101 1.38629 1.38629 1.38629 1.38629 | |
11102 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11103 27 3.13947 2.62745 3.18567 0.17069 27 - - | |
11104 1.38629 1.38629 1.38629 1.38629 | |
11105 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11106 28 3.49075 0.12354 3.53772 2.87077 28 - - | |
11107 1.38629 1.38629 1.38629 1.38629 | |
11108 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11109 29 3.49075 0.12354 3.53772 2.87077 29 - - | |
11110 1.38629 1.38629 1.38629 1.38629 | |
11111 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11112 30 2.98216 3.63834 0.11177 3.54832 30 - - | |
11113 1.38629 1.38629 1.38629 1.38629 | |
11114 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11115 31 3.49075 0.12354 3.53772 2.87077 31 - - | |
11116 1.38629 1.38629 1.38629 1.38629 | |
11117 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11118 32 3.13947 2.62745 3.18567 0.17069 32 - - | |
11119 1.38629 1.38629 1.38629 1.38629 | |
11120 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11121 33 2.98216 3.63834 0.11177 3.54832 33 - - | |
11122 1.38629 1.38629 1.38629 1.38629 | |
11123 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11124 34 0.13545 3.43036 2.83437 3.33682 34 - - | |
11125 1.38629 1.38629 1.38629 1.38629 | |
11126 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11127 35 0.13545 3.43036 2.83437 3.33682 35 - - | |
11128 1.38629 1.38629 1.38629 1.38629 | |
11129 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11130 36 3.13947 2.62745 3.18567 0.17069 36 - - | |
11131 1.38629 1.38629 1.38629 1.38629 | |
11132 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11133 37 3.13947 2.62745 3.18567 0.17069 37 - - | |
11134 1.38629 1.38629 1.38629 1.38629 | |
11135 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11136 38 3.13947 2.62745 3.18567 0.17069 38 - - | |
11137 1.38629 1.38629 1.38629 1.38629 | |
11138 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11139 39 0.13545 3.43036 2.83437 3.33682 39 - - | |
11140 1.38629 1.38629 1.38629 1.38629 | |
11141 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11142 40 0.13545 3.43036 2.83437 3.33682 40 - - | |
11143 1.38629 1.38629 1.38629 1.38629 | |
11144 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11145 41 2.98216 3.63834 0.11177 3.54832 41 - - | |
11146 1.38629 1.38629 1.38629 1.38629 | |
11147 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11148 42 3.49075 0.12354 3.53772 2.87077 42 - - | |
11149 1.38629 1.38629 1.38629 1.38629 | |
11150 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11151 43 0.13545 3.43036 2.83437 3.33682 43 - - | |
11152 1.38629 1.38629 1.38629 1.38629 | |
11153 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11154 44 3.13947 2.62745 3.18567 0.17069 44 - - | |
11155 1.38629 1.38629 1.38629 1.38629 | |
11156 0.03582 4.04013 4.04013 1.46634 0.26236 1.09861 0.40547 | |
11157 45 0.13545 3.43036 2.83437 3.33682 45 - - | |
11158 1.38629 1.38629 1.38629 1.38629 | |
11159 0.01807 4.02238 * 1.46634 0.26236 0.00000 * | |
11160 // | |
11161 HMMER3/b [3.0 | March 2010] | |
11162 NAME 4_LSU_Alveolata_4_LSU_start_five_long | |
11163 LENG 45 | |
11164 ALPH DNA | |
11165 RF no | |
11166 CS no | |
11167 MAP yes | |
11168 DATE Thu Mar 1 14:40:33 2012 | |
11169 NSEQ 4 | |
11170 EFFN 3.371094 | |
11171 CKSUM 2728876017 | |
11172 STATS LOCAL MSV -7.6702 0.71933 | |
11173 STATS LOCAL VITERBI -7.7190 0.71933 | |
11174 STATS LOCAL FORWARD -3.9488 0.71933 | |
11175 HMM A C G T | |
11176 m->m m->i m->d i->m i->i d->m d->d | |
11177 COMPO 1.14299 1.32265 1.60290 1.54461 | |
11178 1.38629 1.38629 1.38629 1.38629 | |
11179 0.03656 4.02018 4.02018 1.46634 0.26236 0.00000 * | |
11180 1 3.10416 2.60503 3.15172 0.17619 1 - - | |
11181 1.38629 1.38629 1.38629 1.38629 | |
11182 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11183 2 3.10416 2.60503 3.15172 0.17619 2 - - | |
11184 1.38629 1.38629 1.38629 1.38629 | |
11185 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11186 3 3.10416 2.60503 3.15172 0.17619 3 - - | |
11187 1.38629 1.38629 1.38629 1.38629 | |
11188 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11189 4 2.95822 3.60333 0.11547 3.50963 4 - - | |
11190 1.38629 1.38629 1.38629 1.38629 | |
11191 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11192 5 3.45082 0.12812 3.49952 2.84187 5 - - | |
11193 1.38629 1.38629 1.38629 1.38629 | |
11194 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11195 6 0.13988 3.39564 2.81190 3.29876 6 - - | |
11196 1.38629 1.38629 1.38629 1.38629 | |
11197 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11198 7 3.45082 0.12812 3.49952 2.84187 7 - - | |
11199 1.38629 1.38629 1.38629 1.38629 | |
11200 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11201 8 3.45082 0.12812 3.49952 2.84187 8 - - | |
11202 1.38629 1.38629 1.38629 1.38629 | |
11203 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11204 9 3.10416 2.60503 3.15172 0.17619 9 - - | |
11205 1.38629 1.38629 1.38629 1.38629 | |
11206 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11207 10 2.95822 3.60333 0.11547 3.50963 10 - - | |
11208 1.38629 1.38629 1.38629 1.38629 | |
11209 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11210 11 0.13988 3.39564 2.81190 3.29876 11 - - | |
11211 1.38629 1.38629 1.38629 1.38629 | |
11212 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11213 12 0.13988 3.39564 2.81190 3.29876 12 - - | |
11214 1.38629 1.38629 1.38629 1.38629 | |
11215 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11216 13 3.45082 0.12812 3.49952 2.84187 13 - - | |
11217 1.38629 1.38629 1.38629 1.38629 | |
11218 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11219 14 0.97314 2.14888 2.16446 0.93987 14 - - | |
11220 1.38629 1.38629 1.38629 1.38629 | |
11221 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11222 15 3.45082 0.12812 3.49952 2.84187 15 - - | |
11223 1.38629 1.38629 1.38629 1.38629 | |
11224 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11225 16 0.13988 3.39564 2.81190 3.29876 16 - - | |
11226 1.38629 1.38629 1.38629 1.38629 | |
11227 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11228 17 0.13988 3.39564 2.81190 3.29876 17 - - | |
11229 1.38629 1.38629 1.38629 1.38629 | |
11230 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11231 18 2.95822 3.60333 0.11547 3.50963 18 - - | |
11232 1.38629 1.38629 1.38629 1.38629 | |
11233 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11234 19 3.45082 0.12812 3.49952 2.84187 19 - - | |
11235 1.38629 1.38629 1.38629 1.38629 | |
11236 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11237 20 0.13988 3.39564 2.81190 3.29876 20 - - | |
11238 1.38629 1.38629 1.38629 1.38629 | |
11239 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11240 21 0.13988 3.39564 2.81190 3.29876 21 - - | |
11241 1.38629 1.38629 1.38629 1.38629 | |
11242 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11243 22 2.95822 3.60333 0.11547 3.50963 22 - - | |
11244 1.38629 1.38629 1.38629 1.38629 | |
11245 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11246 23 0.13988 3.39564 2.81190 3.29876 23 - - | |
11247 1.38629 1.38629 1.38629 1.38629 | |
11248 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11249 24 3.10416 2.60503 3.15172 0.17619 24 - - | |
11250 1.38629 1.38629 1.38629 1.38629 | |
11251 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11252 25 2.95822 3.60333 0.11547 3.50963 25 - - | |
11253 1.38629 1.38629 1.38629 1.38629 | |
11254 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11255 26 0.13988 3.39564 2.81190 3.29876 26 - - | |
11256 1.38629 1.38629 1.38629 1.38629 | |
11257 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11258 27 3.45082 0.12812 3.49952 2.84187 27 - - | |
11259 1.38629 1.38629 1.38629 1.38629 | |
11260 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11261 28 3.45082 0.12812 3.49952 2.84187 28 - - | |
11262 1.38629 1.38629 1.38629 1.38629 | |
11263 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11264 29 3.45082 0.12812 3.49952 2.84187 29 - - | |
11265 1.38629 1.38629 1.38629 1.38629 | |
11266 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11267 30 2.95822 3.60333 0.11547 3.50963 30 - - | |
11268 1.38629 1.38629 1.38629 1.38629 | |
11269 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11270 31 3.45082 0.12812 3.49952 2.84187 31 - - | |
11271 1.38629 1.38629 1.38629 1.38629 | |
11272 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11273 32 3.10416 2.60503 3.15172 0.17619 32 - - | |
11274 1.38629 1.38629 1.38629 1.38629 | |
11275 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11276 33 2.95822 3.60333 0.11547 3.50963 33 - - | |
11277 1.38629 1.38629 1.38629 1.38629 | |
11278 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11279 34 0.13988 3.39564 2.81190 3.29876 34 - - | |
11280 1.38629 1.38629 1.38629 1.38629 | |
11281 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11282 35 0.13988 3.39564 2.81190 3.29876 35 - - | |
11283 1.38629 1.38629 1.38629 1.38629 | |
11284 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11285 36 3.45082 0.12812 3.49952 2.84187 36 - - | |
11286 1.38629 1.38629 1.38629 1.38629 | |
11287 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11288 37 3.10416 2.60503 3.15172 0.17619 37 - - | |
11289 1.38629 1.38629 1.38629 1.38629 | |
11290 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11291 38 3.10416 2.60503 3.15172 0.17619 38 - - | |
11292 1.38629 1.38629 1.38629 1.38629 | |
11293 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11294 39 0.13988 3.39564 2.81190 3.29876 39 - - | |
11295 1.38629 1.38629 1.38629 1.38629 | |
11296 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11297 40 0.13988 3.39564 2.81190 3.29876 40 - - | |
11298 1.38629 1.38629 1.38629 1.38629 | |
11299 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11300 41 2.95822 3.60333 0.11547 3.50963 41 - - | |
11301 1.38629 1.38629 1.38629 1.38629 | |
11302 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11303 42 3.45082 0.12812 3.49952 2.84187 42 - - | |
11304 1.38629 1.38629 1.38629 1.38629 | |
11305 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11306 43 0.13988 3.39564 2.81190 3.29876 43 - - | |
11307 1.38629 1.38629 1.38629 1.38629 | |
11308 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11309 44 3.10416 2.60503 3.15172 0.17619 44 - - | |
11310 1.38629 1.38629 1.38629 1.38629 | |
11311 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 | |
11312 45 0.13988 3.39564 2.81190 3.29876 45 - - | |
11313 1.38629 1.38629 1.38629 1.38629 | |
11314 0.01845 4.00206 * 1.46634 0.26236 0.00000 * | |
11315 // | |
11316 HMMER3/b [3.0 | March 2010] | |
11317 NAME 4_LSU_Alveolata_4_LSU_start_four_long | |
11318 LENG 45 | |
11319 ALPH DNA | |
11320 RF no | |
11321 CS no | |
11322 MAP yes | |
11323 DATE Thu Mar 1 14:40:26 2012 | |
11324 NSEQ 2 | |
11325 EFFN 2.000000 | |
11326 CKSUM 998262845 | |
11327 STATS LOCAL MSV -7.6891 0.73003 | |
11328 STATS LOCAL VITERBI -8.4068 0.73003 | |
11329 STATS LOCAL FORWARD -3.2433 0.73003 | |
11330 HMM A C G T | |
11331 m->m m->i m->d i->m i->i d->m d->d | |
11332 COMPO 1.11611 1.39855 1.45506 1.64970 | |
11333 1.38629 1.38629 1.38629 1.38629 | |
11334 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
11335 1 2.15554 1.00938 2.23102 0.88601 1 - - | |
11336 1.38629 1.38629 1.38629 1.38629 | |
11337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11338 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
11339 1.38629 1.38629 1.38629 1.38629 | |
11340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11341 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
11342 1.38629 1.38629 1.38629 1.38629 | |
11343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11344 4 0.23862 2.84929 2.43386 2.70756 4 - - | |
11345 1.38629 1.38629 1.38629 1.38629 | |
11346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11347 5 2.53331 3.02441 0.20344 2.88069 5 - - | |
11348 1.38629 1.38629 1.38629 1.38629 | |
11349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11350 6 0.23862 2.84929 2.43386 2.70756 6 - - | |
11351 1.38629 1.38629 1.38629 1.38629 | |
11352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11353 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
11354 1.38629 1.38629 1.38629 1.38629 | |
11355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11356 8 0.23862 2.84929 2.43386 2.70756 8 - - | |
11357 1.38629 1.38629 1.38629 1.38629 | |
11358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11359 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
11360 1.38629 1.38629 1.38629 1.38629 | |
11361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11362 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
11363 1.38629 1.38629 1.38629 1.38629 | |
11364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11365 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
11366 1.38629 1.38629 1.38629 1.38629 | |
11367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11368 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
11369 1.38629 1.38629 1.38629 1.38629 | |
11370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11371 13 2.53331 3.02441 0.20344 2.88069 13 - - | |
11372 1.38629 1.38629 1.38629 1.38629 | |
11373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11374 14 2.81865 0.23582 2.88868 2.35662 14 - - | |
11375 1.38629 1.38629 1.38629 1.38629 | |
11376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11377 15 2.15554 1.00938 2.23102 0.88601 15 - - | |
11378 1.38629 1.38629 1.38629 1.38629 | |
11379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11380 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
11381 1.38629 1.38629 1.38629 1.38629 | |
11382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11383 17 2.53331 3.02441 0.20344 2.88069 17 - - | |
11384 1.38629 1.38629 1.38629 1.38629 | |
11385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11386 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
11387 1.38629 1.38629 1.38629 1.38629 | |
11388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11389 19 2.15554 1.00938 2.23102 0.88601 19 - - | |
11390 1.38629 1.38629 1.38629 1.38629 | |
11391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11392 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
11393 1.38629 1.38629 1.38629 1.38629 | |
11394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11395 21 0.92825 2.28391 0.95698 2.13014 21 - - | |
11396 1.38629 1.38629 1.38629 1.38629 | |
11397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11398 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
11399 1.38629 1.38629 1.38629 1.38629 | |
11400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11401 23 2.81865 0.23582 2.88868 2.35662 23 - - | |
11402 1.38629 1.38629 1.38629 1.38629 | |
11403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11404 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
11405 1.38629 1.38629 1.38629 1.38629 | |
11406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11407 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
11408 1.38629 1.38629 1.38629 1.38629 | |
11409 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11410 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
11411 1.38629 1.38629 1.38629 1.38629 | |
11412 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11413 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
11414 1.38629 1.38629 1.38629 1.38629 | |
11415 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11416 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
11417 1.38629 1.38629 1.38629 1.38629 | |
11418 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11419 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
11420 1.38629 1.38629 1.38629 1.38629 | |
11421 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11422 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
11423 1.38629 1.38629 1.38629 1.38629 | |
11424 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11425 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
11426 1.38629 1.38629 1.38629 1.38629 | |
11427 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11428 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
11429 1.38629 1.38629 1.38629 1.38629 | |
11430 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11431 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
11432 1.38629 1.38629 1.38629 1.38629 | |
11433 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11434 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
11435 1.38629 1.38629 1.38629 1.38629 | |
11436 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11437 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
11438 1.38629 1.38629 1.38629 1.38629 | |
11439 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11440 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
11441 1.38629 1.38629 1.38629 1.38629 | |
11442 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11443 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
11444 1.38629 1.38629 1.38629 1.38629 | |
11445 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11446 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
11447 1.38629 1.38629 1.38629 1.38629 | |
11448 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11449 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
11450 1.38629 1.38629 1.38629 1.38629 | |
11451 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11452 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
11453 1.38629 1.38629 1.38629 1.38629 | |
11454 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11455 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
11456 1.38629 1.38629 1.38629 1.38629 | |
11457 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11458 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
11459 1.38629 1.38629 1.38629 1.38629 | |
11460 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11461 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
11462 1.38629 1.38629 1.38629 1.38629 | |
11463 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11464 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
11465 1.38629 1.38629 1.38629 1.38629 | |
11466 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11467 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
11468 1.38629 1.38629 1.38629 1.38629 | |
11469 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
11470 // | |
11471 HMMER3/b [3.0 | March 2010] | |
11472 NAME 4_LSU_Alveolata_4_LSU_start_fourteen_long | |
11473 LENG 45 | |
11474 ALPH DNA | |
11475 RF no | |
11476 CS no | |
11477 MAP yes | |
11478 DATE Thu Mar 1 14:42:14 2012 | |
11479 NSEQ 2 | |
11480 EFFN 2.000000 | |
11481 CKSUM 551182428 | |
11482 STATS LOCAL MSV -7.6363 0.72784 | |
11483 STATS LOCAL VITERBI -8.3274 0.72784 | |
11484 STATS LOCAL FORWARD -3.4964 0.72784 | |
11485 HMM A C G T | |
11486 m->m m->i m->d i->m i->i d->m d->d | |
11487 COMPO 1.19067 1.40884 1.42869 1.55148 | |
11488 1.38629 1.38629 1.38629 1.38629 | |
11489 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
11490 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
11491 1.38629 1.38629 1.38629 1.38629 | |
11492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11493 2 2.53331 3.02441 0.20344 2.88069 2 - - | |
11494 1.38629 1.38629 1.38629 1.38629 | |
11495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11496 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
11497 1.38629 1.38629 1.38629 1.38629 | |
11498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11499 4 2.81865 0.23582 2.88868 2.35662 4 - - | |
11500 1.38629 1.38629 1.38629 1.38629 | |
11501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11502 5 2.53331 3.02441 0.20344 2.88069 5 - - | |
11503 1.38629 1.38629 1.38629 1.38629 | |
11504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11505 6 0.23862 2.84929 2.43386 2.70756 6 - - | |
11506 1.38629 1.38629 1.38629 1.38629 | |
11507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11508 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
11509 1.38629 1.38629 1.38629 1.38629 | |
11510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11511 8 0.23862 2.84929 2.43386 2.70756 8 - - | |
11512 1.38629 1.38629 1.38629 1.38629 | |
11513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11514 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
11515 1.38629 1.38629 1.38629 1.38629 | |
11516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11517 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
11518 1.38629 1.38629 1.38629 1.38629 | |
11519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11520 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
11521 1.38629 1.38629 1.38629 1.38629 | |
11522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11523 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
11524 1.38629 1.38629 1.38629 1.38629 | |
11525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11526 13 2.57915 2.25909 2.64442 0.28946 13 - - | |
11527 1.38629 1.38629 1.38629 1.38629 | |
11528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11529 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
11530 1.38629 1.38629 1.38629 1.38629 | |
11531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11532 15 2.81865 0.23582 2.88868 2.35662 15 - - | |
11533 1.38629 1.38629 1.38629 1.38629 | |
11534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11535 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
11536 1.38629 1.38629 1.38629 1.38629 | |
11537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11538 17 2.53331 3.02441 0.20344 2.88069 17 - - | |
11539 1.38629 1.38629 1.38629 1.38629 | |
11540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11541 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
11542 1.38629 1.38629 1.38629 1.38629 | |
11543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11544 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
11545 1.38629 1.38629 1.38629 1.38629 | |
11546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11547 20 2.81865 0.23582 2.88868 2.35662 20 - - | |
11548 1.38629 1.38629 1.38629 1.38629 | |
11549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11550 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
11551 1.38629 1.38629 1.38629 1.38629 | |
11552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11553 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
11554 1.38629 1.38629 1.38629 1.38629 | |
11555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11556 23 2.81865 0.23582 2.88868 2.35662 23 - - | |
11557 1.38629 1.38629 1.38629 1.38629 | |
11558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11559 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
11560 1.38629 1.38629 1.38629 1.38629 | |
11561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11562 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
11563 1.38629 1.38629 1.38629 1.38629 | |
11564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11565 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
11566 1.38629 1.38629 1.38629 1.38629 | |
11567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11568 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
11569 1.38629 1.38629 1.38629 1.38629 | |
11570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11571 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
11572 1.38629 1.38629 1.38629 1.38629 | |
11573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11574 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
11575 1.38629 1.38629 1.38629 1.38629 | |
11576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11577 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
11578 1.38629 1.38629 1.38629 1.38629 | |
11579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11580 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
11581 1.38629 1.38629 1.38629 1.38629 | |
11582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11583 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
11584 1.38629 1.38629 1.38629 1.38629 | |
11585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11586 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
11587 1.38629 1.38629 1.38629 1.38629 | |
11588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11589 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
11590 1.38629 1.38629 1.38629 1.38629 | |
11591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11592 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
11593 1.38629 1.38629 1.38629 1.38629 | |
11594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11595 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
11596 1.38629 1.38629 1.38629 1.38629 | |
11597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11598 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
11599 1.38629 1.38629 1.38629 1.38629 | |
11600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11601 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
11602 1.38629 1.38629 1.38629 1.38629 | |
11603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11604 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
11605 1.38629 1.38629 1.38629 1.38629 | |
11606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11607 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
11608 1.38629 1.38629 1.38629 1.38629 | |
11609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11610 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
11611 1.38629 1.38629 1.38629 1.38629 | |
11612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11613 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
11614 1.38629 1.38629 1.38629 1.38629 | |
11615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11616 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
11617 1.38629 1.38629 1.38629 1.38629 | |
11618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11619 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
11620 1.38629 1.38629 1.38629 1.38629 | |
11621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11622 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
11623 1.38629 1.38629 1.38629 1.38629 | |
11624 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
11625 // | |
11626 HMMER3/b [3.0 | March 2010] | |
11627 NAME 4_LSU_Alveolata_4_LSU_start_ninea_long | |
11628 LENG 45 | |
11629 ALPH DNA | |
11630 RF no | |
11631 CS no | |
11632 MAP yes | |
11633 DATE Thu Mar 1 14:41:00 2012 | |
11634 NSEQ 7 | |
11635 EFFN 3.790527 | |
11636 CKSUM 4206231787 | |
11637 STATS LOCAL MSV -7.2724 0.71933 | |
11638 STATS LOCAL VITERBI -7.6144 0.71933 | |
11639 STATS LOCAL FORWARD -4.2349 0.71933 | |
11640 HMM A C G T | |
11641 m->m m->i m->d i->m i->i d->m d->d | |
11642 COMPO 1.36808 1.51781 1.52107 1.17852 | |
11643 1.38629 1.38629 1.38629 1.38629 | |
11644 0.03396 4.09276 4.09276 1.46634 0.26236 0.00000 * | |
11645 1 0.89002 1.69049 2.09997 1.26421 1 - - | |
11646 1.38629 1.38629 1.38629 1.38629 | |
11647 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11648 2 2.66645 0.48139 2.73592 1.39537 2 - - | |
11649 1.38629 1.38629 1.38629 1.38629 | |
11650 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11651 3 2.88838 1.91919 2.94521 0.29435 3 - - | |
11652 1.38629 1.38629 1.38629 1.38629 | |
11653 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11654 4 2.65817 1.47680 2.72315 0.45273 4 - - | |
11655 1.38629 1.38629 1.38629 1.38629 | |
11656 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11657 5 3.23093 2.68543 3.27356 0.15734 5 - - | |
11658 1.38629 1.38629 1.38629 1.38629 | |
11659 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11660 6 3.23093 2.68543 3.27356 0.15734 6 - - | |
11661 1.38629 1.38629 1.38629 1.38629 | |
11662 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11663 7 3.59213 0.11274 3.63458 2.94342 7 - - | |
11664 1.38629 1.38629 1.38629 1.38629 | |
11665 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11666 8 3.59213 0.11274 3.63458 2.94342 8 - - | |
11667 1.38629 1.38629 1.38629 1.38629 | |
11668 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11669 9 3.23093 2.68543 3.27356 0.15734 9 - - | |
11670 1.38629 1.38629 1.38629 1.38629 | |
11671 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11672 10 3.04202 3.72657 0.10304 3.64608 10 - - | |
11673 1.38629 1.38629 1.38629 1.38629 | |
11674 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11675 11 0.12486 3.51901 2.89141 3.43411 11 - - | |
11676 1.38629 1.38629 1.38629 1.38629 | |
11677 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11678 12 3.04202 3.72657 0.10304 3.64608 12 - - | |
11679 1.38629 1.38629 1.38629 1.38629 | |
11680 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11681 13 0.12486 3.51901 2.89141 3.43411 13 - - | |
11682 1.38629 1.38629 1.38629 1.38629 | |
11683 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11684 14 3.23093 2.68543 3.27356 0.15734 14 - - | |
11685 1.38629 1.38629 1.38629 1.38629 | |
11686 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11687 15 3.04202 3.72657 0.10304 3.64608 15 - - | |
11688 1.38629 1.38629 1.38629 1.38629 | |
11689 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11690 16 3.23093 2.68543 3.27356 0.15734 16 - - | |
11691 1.38629 1.38629 1.38629 1.38629 | |
11692 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11693 17 0.12486 3.51901 2.89141 3.43411 17 - - | |
11694 1.38629 1.38629 1.38629 1.38629 | |
11695 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11696 18 3.59213 0.11274 3.63458 2.94342 18 - - | |
11697 1.38629 1.38629 1.38629 1.38629 | |
11698 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11699 19 3.04202 3.72657 0.10304 3.64608 19 - - | |
11700 1.38629 1.38629 1.38629 1.38629 | |
11701 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11702 20 0.12486 3.51901 2.89141 3.43411 20 - - | |
11703 1.38629 1.38629 1.38629 1.38629 | |
11704 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11705 21 3.04202 3.72657 0.10304 3.64608 21 - - | |
11706 1.38629 1.38629 1.38629 1.38629 | |
11707 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11708 22 3.04202 3.72657 0.10304 3.64608 22 - - | |
11709 1.38629 1.38629 1.38629 1.38629 | |
11710 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11711 23 3.59213 0.11274 3.63458 2.94342 23 - - | |
11712 1.38629 1.38629 1.38629 1.38629 | |
11713 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11714 24 3.23093 2.68543 3.27356 0.15734 24 - - | |
11715 1.38629 1.38629 1.38629 1.38629 | |
11716 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11717 25 0.12486 3.51901 2.89141 3.43411 25 - - | |
11718 1.38629 1.38629 1.38629 1.38629 | |
11719 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11720 26 3.23093 2.68543 3.27356 0.15734 26 - - | |
11721 1.38629 1.38629 1.38629 1.38629 | |
11722 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11723 27 3.59213 0.11274 3.63458 2.94342 27 - - | |
11724 1.38629 1.38629 1.38629 1.38629 | |
11725 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11726 28 3.59213 0.11274 3.63458 2.94342 28 - - | |
11727 1.38629 1.38629 1.38629 1.38629 | |
11728 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11729 29 3.04202 3.72657 0.10304 3.64608 29 - - | |
11730 1.38629 1.38629 1.38629 1.38629 | |
11731 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11732 30 3.59213 0.11274 3.63458 2.94342 30 - - | |
11733 1.38629 1.38629 1.38629 1.38629 | |
11734 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11735 31 3.23093 2.68543 3.27356 0.15734 31 - - | |
11736 1.38629 1.38629 1.38629 1.38629 | |
11737 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11738 32 3.04202 3.72657 0.10304 3.64608 32 - - | |
11739 1.38629 1.38629 1.38629 1.38629 | |
11740 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11741 33 0.12486 3.51901 2.89141 3.43411 33 - - | |
11742 1.38629 1.38629 1.38629 1.38629 | |
11743 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11744 34 0.12486 3.51901 2.89141 3.43411 34 - - | |
11745 1.38629 1.38629 1.38629 1.38629 | |
11746 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11747 35 3.23093 2.68543 3.27356 0.15734 35 - - | |
11748 1.38629 1.38629 1.38629 1.38629 | |
11749 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11750 36 3.23093 2.68543 3.27356 0.15734 36 - - | |
11751 1.38629 1.38629 1.38629 1.38629 | |
11752 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11753 37 3.23093 2.68543 3.27356 0.15734 37 - - | |
11754 1.38629 1.38629 1.38629 1.38629 | |
11755 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11756 38 0.12486 3.51901 2.89141 3.43411 38 - - | |
11757 1.38629 1.38629 1.38629 1.38629 | |
11758 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11759 39 0.12486 3.51901 2.89141 3.43411 39 - - | |
11760 1.38629 1.38629 1.38629 1.38629 | |
11761 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11762 40 3.04202 3.72657 0.10304 3.64608 40 - - | |
11763 1.38629 1.38629 1.38629 1.38629 | |
11764 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11765 41 3.59213 0.11274 3.63458 2.94342 41 - - | |
11766 1.38629 1.38629 1.38629 1.38629 | |
11767 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11768 42 0.12486 3.51901 2.89141 3.43411 42 - - | |
11769 1.38629 1.38629 1.38629 1.38629 | |
11770 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11771 43 3.23093 2.68543 3.27356 0.15734 43 - - | |
11772 1.38629 1.38629 1.38629 1.38629 | |
11773 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11774 44 0.12486 3.51901 2.89141 3.43411 44 - - | |
11775 1.38629 1.38629 1.38629 1.38629 | |
11776 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 | |
11777 45 3.23093 2.68543 3.27356 0.15734 45 - - | |
11778 1.38629 1.38629 1.38629 1.38629 | |
11779 0.01712 4.07593 * 1.46634 0.26236 0.00000 * | |
11780 // | |
11781 HMMER3/b [3.0 | March 2010] | |
11782 NAME 4_LSU_Alveolata_4_LSU_start_nineb_long | |
11783 LENG 45 | |
11784 ALPH DNA | |
11785 RF no | |
11786 CS no | |
11787 MAP yes | |
11788 DATE Thu Mar 1 14:41:05 2012 | |
11789 NSEQ 3 | |
11790 EFFN 3.000000 | |
11791 CKSUM 3743554959 | |
11792 STATS LOCAL MSV -8.1311 0.72123 | |
11793 STATS LOCAL VITERBI -7.9839 0.72123 | |
11794 STATS LOCAL FORWARD -4.0562 0.72123 | |
11795 HMM A C G T | |
11796 m->m m->i m->d i->m i->i d->m d->d | |
11797 COMPO 1.30454 1.51465 1.59551 1.18413 | |
11798 1.38629 1.38629 1.38629 1.38629 | |
11799 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * | |
11800 1 0.70020 2.19823 2.14894 1.28770 1 - - | |
11801 1.38629 1.38629 1.38629 1.38629 | |
11802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11803 2 2.97980 2.52563 3.03204 0.19727 2 - - | |
11804 1.38629 1.38629 1.38629 1.38629 | |
11805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11806 3 2.97980 2.52563 3.03204 0.19727 3 - - | |
11807 1.38629 1.38629 1.38629 1.38629 | |
11808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11809 4 2.97980 2.52563 3.03204 0.19727 4 - - | |
11810 1.38629 1.38629 1.38629 1.38629 | |
11811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11812 5 2.97980 2.52563 3.03204 0.19727 5 - - | |
11813 1.38629 1.38629 1.38629 1.38629 | |
11814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11815 6 2.97980 2.52563 3.03204 0.19727 6 - - | |
11816 1.38629 1.38629 1.38629 1.38629 | |
11817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11818 7 3.30705 0.14631 3.36166 2.73626 7 - - | |
11819 1.38629 1.38629 1.38629 1.38629 | |
11820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11821 8 3.30705 0.14631 3.36166 2.73626 8 - - | |
11822 1.38629 1.38629 1.38629 1.38629 | |
11823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11824 9 2.97980 2.52563 3.03204 0.19727 9 - - | |
11825 1.38629 1.38629 1.38629 1.38629 | |
11826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11827 10 2.86982 3.47591 0.13017 3.36931 10 - - | |
11828 1.38629 1.38629 1.38629 1.38629 | |
11829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11830 11 0.15719 3.27118 2.73043 3.16274 11 - - | |
11831 1.38629 1.38629 1.38629 1.38629 | |
11832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11833 12 0.15719 3.27118 2.73043 3.16274 12 - - | |
11834 1.38629 1.38629 1.38629 1.38629 | |
11835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11836 13 0.15719 3.27118 2.73043 3.16274 13 - - | |
11837 1.38629 1.38629 1.38629 1.38629 | |
11838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11839 14 2.97980 2.52563 3.03204 0.19727 14 - - | |
11840 1.38629 1.38629 1.38629 1.38629 | |
11841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11842 15 2.97980 2.52563 3.03204 0.19727 15 - - | |
11843 1.38629 1.38629 1.38629 1.38629 | |
11844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11845 16 2.86982 3.47591 0.13017 3.36931 16 - - | |
11846 1.38629 1.38629 1.38629 1.38629 | |
11847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11848 17 0.15719 3.27118 2.73043 3.16274 17 - - | |
11849 1.38629 1.38629 1.38629 1.38629 | |
11850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11851 18 3.30705 0.14631 3.36166 2.73626 18 - - | |
11852 1.38629 1.38629 1.38629 1.38629 | |
11853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11854 19 2.86982 3.47591 0.13017 3.36931 19 - - | |
11855 1.38629 1.38629 1.38629 1.38629 | |
11856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11857 20 0.15719 3.27118 2.73043 3.16274 20 - - | |
11858 1.38629 1.38629 1.38629 1.38629 | |
11859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11860 21 2.86982 3.47591 0.13017 3.36931 21 - - | |
11861 1.38629 1.38629 1.38629 1.38629 | |
11862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11863 22 2.86982 3.47591 0.13017 3.36931 22 - - | |
11864 1.38629 1.38629 1.38629 1.38629 | |
11865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11866 23 3.30705 0.14631 3.36166 2.73626 23 - - | |
11867 1.38629 1.38629 1.38629 1.38629 | |
11868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11869 24 3.30705 0.14631 3.36166 2.73626 24 - - | |
11870 1.38629 1.38629 1.38629 1.38629 | |
11871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11872 25 0.15719 3.27118 2.73043 3.16274 25 - - | |
11873 1.38629 1.38629 1.38629 1.38629 | |
11874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11875 26 2.97980 2.52563 3.03204 0.19727 26 - - | |
11876 1.38629 1.38629 1.38629 1.38629 | |
11877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11878 27 3.30705 0.14631 3.36166 2.73626 27 - - | |
11879 1.38629 1.38629 1.38629 1.38629 | |
11880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11881 28 3.30705 0.14631 3.36166 2.73626 28 - - | |
11882 1.38629 1.38629 1.38629 1.38629 | |
11883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11884 29 2.86982 3.47591 0.13017 3.36931 29 - - | |
11885 1.38629 1.38629 1.38629 1.38629 | |
11886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11887 30 3.30705 0.14631 3.36166 2.73626 30 - - | |
11888 1.38629 1.38629 1.38629 1.38629 | |
11889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11890 31 2.97980 2.52563 3.03204 0.19727 31 - - | |
11891 1.38629 1.38629 1.38629 1.38629 | |
11892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11893 32 2.86982 3.47591 0.13017 3.36931 32 - - | |
11894 1.38629 1.38629 1.38629 1.38629 | |
11895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11896 33 0.15719 3.27118 2.73043 3.16274 33 - - | |
11897 1.38629 1.38629 1.38629 1.38629 | |
11898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11899 34 0.15719 3.27118 2.73043 3.16274 34 - - | |
11900 1.38629 1.38629 1.38629 1.38629 | |
11901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11902 35 2.97980 2.52563 3.03204 0.19727 35 - - | |
11903 1.38629 1.38629 1.38629 1.38629 | |
11904 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11905 36 2.97980 2.52563 3.03204 0.19727 36 - - | |
11906 1.38629 1.38629 1.38629 1.38629 | |
11907 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11908 37 2.97980 2.52563 3.03204 0.19727 37 - - | |
11909 1.38629 1.38629 1.38629 1.38629 | |
11910 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11911 38 0.15719 3.27118 2.73043 3.16274 38 - - | |
11912 1.38629 1.38629 1.38629 1.38629 | |
11913 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11914 39 0.15719 3.27118 2.73043 3.16274 39 - - | |
11915 1.38629 1.38629 1.38629 1.38629 | |
11916 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11917 40 2.86982 3.47591 0.13017 3.36931 40 - - | |
11918 1.38629 1.38629 1.38629 1.38629 | |
11919 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11920 41 3.30705 0.14631 3.36166 2.73626 41 - - | |
11921 1.38629 1.38629 1.38629 1.38629 | |
11922 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11923 42 0.15719 3.27118 2.73043 3.16274 42 - - | |
11924 1.38629 1.38629 1.38629 1.38629 | |
11925 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11926 43 2.97980 2.52563 3.03204 0.19727 43 - - | |
11927 1.38629 1.38629 1.38629 1.38629 | |
11928 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11929 44 0.15719 3.27118 2.73043 3.16274 44 - - | |
11930 1.38629 1.38629 1.38629 1.38629 | |
11931 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 | |
11932 45 2.97980 2.52563 3.03204 0.19727 45 - - | |
11933 1.38629 1.38629 1.38629 1.38629 | |
11934 0.01980 3.93183 * 1.46634 0.26236 0.00000 * | |
11935 // | |
11936 HMMER3/b [3.0 | March 2010] | |
11937 NAME 4_LSU_Alveolata_4_LSU_start_onea_long | |
11938 LENG 45 | |
11939 ALPH DNA | |
11940 RF no | |
11941 CS no | |
11942 MAP yes | |
11943 DATE Thu Mar 1 14:39:33 2012 | |
11944 NSEQ 2 | |
11945 EFFN 2.000000 | |
11946 CKSUM 781382756 | |
11947 STATS LOCAL MSV -7.5283 0.72797 | |
11948 STATS LOCAL VITERBI -8.3724 0.72797 | |
11949 STATS LOCAL FORWARD -3.0815 0.72797 | |
11950 HMM A C G T | |
11951 m->m m->i m->d i->m i->i d->m d->d | |
11952 COMPO 1.09830 1.60161 1.42113 1.49812 | |
11953 1.38629 1.38629 1.38629 1.38629 | |
11954 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
11955 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
11956 1.38629 1.38629 1.38629 1.38629 | |
11957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11958 2 2.81865 0.23582 2.88868 2.35662 2 - - | |
11959 1.38629 1.38629 1.38629 1.38629 | |
11960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11961 3 2.57915 2.25909 2.64442 0.28946 3 - - | |
11962 1.38629 1.38629 1.38629 1.38629 | |
11963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11964 4 0.23862 2.84929 2.43386 2.70756 4 - - | |
11965 1.38629 1.38629 1.38629 1.38629 | |
11966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11967 5 0.23862 2.84929 2.43386 2.70756 5 - - | |
11968 1.38629 1.38629 1.38629 1.38629 | |
11969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11970 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
11971 1.38629 1.38629 1.38629 1.38629 | |
11972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11973 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
11974 1.38629 1.38629 1.38629 1.38629 | |
11975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11976 8 2.53331 3.02441 0.20344 2.88069 8 - - | |
11977 1.38629 1.38629 1.38629 1.38629 | |
11978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11979 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
11980 1.38629 1.38629 1.38629 1.38629 | |
11981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11982 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
11983 1.38629 1.38629 1.38629 1.38629 | |
11984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11985 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
11986 1.38629 1.38629 1.38629 1.38629 | |
11987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11988 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
11989 1.38629 1.38629 1.38629 1.38629 | |
11990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11991 13 2.53331 3.02441 0.20344 2.88069 13 - - | |
11992 1.38629 1.38629 1.38629 1.38629 | |
11993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11994 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
11995 1.38629 1.38629 1.38629 1.38629 | |
11996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
11997 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
11998 1.38629 1.38629 1.38629 1.38629 | |
11999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12000 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
12001 1.38629 1.38629 1.38629 1.38629 | |
12002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12003 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
12004 1.38629 1.38629 1.38629 1.38629 | |
12005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12006 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
12007 1.38629 1.38629 1.38629 1.38629 | |
12008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12009 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
12010 1.38629 1.38629 1.38629 1.38629 | |
12011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12012 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
12013 1.38629 1.38629 1.38629 1.38629 | |
12014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12015 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
12016 1.38629 1.38629 1.38629 1.38629 | |
12017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12018 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
12019 1.38629 1.38629 1.38629 1.38629 | |
12020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12021 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
12022 1.38629 1.38629 1.38629 1.38629 | |
12023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12024 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
12025 1.38629 1.38629 1.38629 1.38629 | |
12026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12027 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
12028 1.38629 1.38629 1.38629 1.38629 | |
12029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12030 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
12031 1.38629 1.38629 1.38629 1.38629 | |
12032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12033 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
12034 1.38629 1.38629 1.38629 1.38629 | |
12035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12036 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
12037 1.38629 1.38629 1.38629 1.38629 | |
12038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12039 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
12040 1.38629 1.38629 1.38629 1.38629 | |
12041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12042 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
12043 1.38629 1.38629 1.38629 1.38629 | |
12044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12045 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
12046 1.38629 1.38629 1.38629 1.38629 | |
12047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12048 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
12049 1.38629 1.38629 1.38629 1.38629 | |
12050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12051 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
12052 1.38629 1.38629 1.38629 1.38629 | |
12053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12054 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
12055 1.38629 1.38629 1.38629 1.38629 | |
12056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12057 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
12058 1.38629 1.38629 1.38629 1.38629 | |
12059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12060 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
12061 1.38629 1.38629 1.38629 1.38629 | |
12062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12063 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
12064 1.38629 1.38629 1.38629 1.38629 | |
12065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12066 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
12067 1.38629 1.38629 1.38629 1.38629 | |
12068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12069 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
12070 1.38629 1.38629 1.38629 1.38629 | |
12071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12072 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
12073 1.38629 1.38629 1.38629 1.38629 | |
12074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12075 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
12076 1.38629 1.38629 1.38629 1.38629 | |
12077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12078 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
12079 1.38629 1.38629 1.38629 1.38629 | |
12080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12081 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
12082 1.38629 1.38629 1.38629 1.38629 | |
12083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12084 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
12085 1.38629 1.38629 1.38629 1.38629 | |
12086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12087 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
12088 1.38629 1.38629 1.38629 1.38629 | |
12089 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
12090 // | |
12091 HMMER3/b [3.0 | March 2010] | |
12092 NAME 4_LSU_Alveolata_4_LSU_start_oneb_long | |
12093 LENG 45 | |
12094 ALPH DNA | |
12095 RF no | |
12096 CS no | |
12097 MAP yes | |
12098 DATE Thu Mar 1 14:39:39 2012 | |
12099 NSEQ 2 | |
12100 EFFN 2.000000 | |
12101 CKSUM 1194618091 | |
12102 STATS LOCAL MSV -7.4605 0.72829 | |
12103 STATS LOCAL VITERBI -8.3928 0.72829 | |
12104 STATS LOCAL FORWARD -3.2424 0.72829 | |
12105 HMM A C G T | |
12106 m->m m->i m->d i->m i->i d->m d->d | |
12107 COMPO 1.09633 1.66831 1.48615 1.38192 | |
12108 1.38629 1.38629 1.38629 1.38629 | |
12109 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
12110 1 0.23862 2.84929 2.43386 2.70756 1 - - | |
12111 1.38629 1.38629 1.38629 1.38629 | |
12112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12113 2 2.57915 2.25909 2.64442 0.28946 2 - - | |
12114 1.38629 1.38629 1.38629 1.38629 | |
12115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12116 3 2.57915 2.25909 2.64442 0.28946 3 - - | |
12117 1.38629 1.38629 1.38629 1.38629 | |
12118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12119 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
12120 1.38629 1.38629 1.38629 1.38629 | |
12121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12122 5 2.53331 3.02441 0.20344 2.88069 5 - - | |
12123 1.38629 1.38629 1.38629 1.38629 | |
12124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12125 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
12126 1.38629 1.38629 1.38629 1.38629 | |
12127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12128 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
12129 1.38629 1.38629 1.38629 1.38629 | |
12130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12131 8 0.23862 2.84929 2.43386 2.70756 8 - - | |
12132 1.38629 1.38629 1.38629 1.38629 | |
12133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12134 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
12135 1.38629 1.38629 1.38629 1.38629 | |
12136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12137 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
12138 1.38629 1.38629 1.38629 1.38629 | |
12139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12140 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
12141 1.38629 1.38629 1.38629 1.38629 | |
12142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12143 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
12144 1.38629 1.38629 1.38629 1.38629 | |
12145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12146 13 2.53331 3.02441 0.20344 2.88069 13 - - | |
12147 1.38629 1.38629 1.38629 1.38629 | |
12148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12149 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
12150 1.38629 1.38629 1.38629 1.38629 | |
12151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12152 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
12153 1.38629 1.38629 1.38629 1.38629 | |
12154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12155 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
12156 1.38629 1.38629 1.38629 1.38629 | |
12157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12158 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
12159 1.38629 1.38629 1.38629 1.38629 | |
12160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12161 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
12162 1.38629 1.38629 1.38629 1.38629 | |
12163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12164 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
12165 1.38629 1.38629 1.38629 1.38629 | |
12166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12167 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
12168 1.38629 1.38629 1.38629 1.38629 | |
12169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12170 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
12171 1.38629 1.38629 1.38629 1.38629 | |
12172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12173 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
12174 1.38629 1.38629 1.38629 1.38629 | |
12175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12176 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
12177 1.38629 1.38629 1.38629 1.38629 | |
12178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12179 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
12180 1.38629 1.38629 1.38629 1.38629 | |
12181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12182 25 0.23862 2.84929 2.43386 2.70756 25 - - | |
12183 1.38629 1.38629 1.38629 1.38629 | |
12184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12185 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
12186 1.38629 1.38629 1.38629 1.38629 | |
12187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12188 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
12189 1.38629 1.38629 1.38629 1.38629 | |
12190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12191 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
12192 1.38629 1.38629 1.38629 1.38629 | |
12193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12194 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
12195 1.38629 1.38629 1.38629 1.38629 | |
12196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12197 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
12198 1.38629 1.38629 1.38629 1.38629 | |
12199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12200 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
12201 1.38629 1.38629 1.38629 1.38629 | |
12202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12203 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
12204 1.38629 1.38629 1.38629 1.38629 | |
12205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12206 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
12207 1.38629 1.38629 1.38629 1.38629 | |
12208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12209 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
12210 1.38629 1.38629 1.38629 1.38629 | |
12211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12212 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
12213 1.38629 1.38629 1.38629 1.38629 | |
12214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12215 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
12216 1.38629 1.38629 1.38629 1.38629 | |
12217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12218 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
12219 1.38629 1.38629 1.38629 1.38629 | |
12220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12221 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
12222 1.38629 1.38629 1.38629 1.38629 | |
12223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12224 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
12225 1.38629 1.38629 1.38629 1.38629 | |
12226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12227 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
12228 1.38629 1.38629 1.38629 1.38629 | |
12229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12230 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
12231 1.38629 1.38629 1.38629 1.38629 | |
12232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12233 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
12234 1.38629 1.38629 1.38629 1.38629 | |
12235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12236 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
12237 1.38629 1.38629 1.38629 1.38629 | |
12238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12239 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
12240 1.38629 1.38629 1.38629 1.38629 | |
12241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12242 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
12243 1.38629 1.38629 1.38629 1.38629 | |
12244 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
12245 // | |
12246 HMMER3/b [3.0 | March 2010] | |
12247 NAME 4_LSU_Alveolata_4_LSU_start_onec_long | |
12248 LENG 45 | |
12249 ALPH DNA | |
12250 RF no | |
12251 CS no | |
12252 MAP yes | |
12253 DATE Thu Mar 1 14:39:45 2012 | |
12254 NSEQ 2 | |
12255 EFFN 2.000000 | |
12256 CKSUM 620831756 | |
12257 STATS LOCAL MSV -7.6900 0.72827 | |
12258 STATS LOCAL VITERBI -8.3711 0.72827 | |
12259 STATS LOCAL FORWARD -3.1028 0.72827 | |
12260 HMM A C G T | |
12261 m->m m->i m->d i->m i->i d->m d->d | |
12262 COMPO 1.18992 1.52066 1.49124 1.37796 | |
12263 1.38629 1.38629 1.38629 1.38629 | |
12264 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
12265 1 2.81865 0.23582 2.88868 2.35662 1 - - | |
12266 1.38629 1.38629 1.38629 1.38629 | |
12267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12268 2 2.57915 2.25909 2.64442 0.28946 2 - - | |
12269 1.38629 1.38629 1.38629 1.38629 | |
12270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12271 3 2.53331 3.02441 0.20344 2.88069 3 - - | |
12272 1.38629 1.38629 1.38629 1.38629 | |
12273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12274 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
12275 1.38629 1.38629 1.38629 1.38629 | |
12276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12277 5 2.57915 2.25909 2.64442 0.28946 5 - - | |
12278 1.38629 1.38629 1.38629 1.38629 | |
12279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12280 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
12281 1.38629 1.38629 1.38629 1.38629 | |
12282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12283 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
12284 1.38629 1.38629 1.38629 1.38629 | |
12285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12286 8 0.23862 2.84929 2.43386 2.70756 8 - - | |
12287 1.38629 1.38629 1.38629 1.38629 | |
12288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12289 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
12290 1.38629 1.38629 1.38629 1.38629 | |
12291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12292 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
12293 1.38629 1.38629 1.38629 1.38629 | |
12294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12295 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
12296 1.38629 1.38629 1.38629 1.38629 | |
12297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12298 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
12299 1.38629 1.38629 1.38629 1.38629 | |
12300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12301 13 2.53331 3.02441 0.20344 2.88069 13 - - | |
12302 1.38629 1.38629 1.38629 1.38629 | |
12303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12304 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
12305 1.38629 1.38629 1.38629 1.38629 | |
12306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12307 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
12308 1.38629 1.38629 1.38629 1.38629 | |
12309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12310 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
12311 1.38629 1.38629 1.38629 1.38629 | |
12312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12313 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
12314 1.38629 1.38629 1.38629 1.38629 | |
12315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12316 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
12317 1.38629 1.38629 1.38629 1.38629 | |
12318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12319 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
12320 1.38629 1.38629 1.38629 1.38629 | |
12321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12322 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
12323 1.38629 1.38629 1.38629 1.38629 | |
12324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12325 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
12326 1.38629 1.38629 1.38629 1.38629 | |
12327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12328 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
12329 1.38629 1.38629 1.38629 1.38629 | |
12330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12331 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
12332 1.38629 1.38629 1.38629 1.38629 | |
12333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12334 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
12335 1.38629 1.38629 1.38629 1.38629 | |
12336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12337 25 2.81865 0.23582 2.88868 2.35662 25 - - | |
12338 1.38629 1.38629 1.38629 1.38629 | |
12339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12340 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
12341 1.38629 1.38629 1.38629 1.38629 | |
12342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12343 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
12344 1.38629 1.38629 1.38629 1.38629 | |
12345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12346 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
12347 1.38629 1.38629 1.38629 1.38629 | |
12348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12349 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
12350 1.38629 1.38629 1.38629 1.38629 | |
12351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12352 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
12353 1.38629 1.38629 1.38629 1.38629 | |
12354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12355 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
12356 1.38629 1.38629 1.38629 1.38629 | |
12357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12358 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
12359 1.38629 1.38629 1.38629 1.38629 | |
12360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12361 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
12362 1.38629 1.38629 1.38629 1.38629 | |
12363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12364 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
12365 1.38629 1.38629 1.38629 1.38629 | |
12366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12367 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
12368 1.38629 1.38629 1.38629 1.38629 | |
12369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12370 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
12371 1.38629 1.38629 1.38629 1.38629 | |
12372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12373 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
12374 1.38629 1.38629 1.38629 1.38629 | |
12375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12376 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
12377 1.38629 1.38629 1.38629 1.38629 | |
12378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12379 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
12380 1.38629 1.38629 1.38629 1.38629 | |
12381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12382 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
12383 1.38629 1.38629 1.38629 1.38629 | |
12384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12385 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
12386 1.38629 1.38629 1.38629 1.38629 | |
12387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12388 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
12389 1.38629 1.38629 1.38629 1.38629 | |
12390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12391 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
12392 1.38629 1.38629 1.38629 1.38629 | |
12393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12394 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
12395 1.38629 1.38629 1.38629 1.38629 | |
12396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12397 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
12398 1.38629 1.38629 1.38629 1.38629 | |
12399 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
12400 // | |
12401 HMMER3/b [3.0 | March 2010] | |
12402 NAME 4_LSU_Alveolata_4_LSU_start_oned_long | |
12403 LENG 45 | |
12404 ALPH DNA | |
12405 RF no | |
12406 CS no | |
12407 MAP yes | |
12408 DATE Thu Mar 1 14:39:50 2012 | |
12409 NSEQ 2 | |
12410 EFFN 2.000000 | |
12411 CKSUM 3374549336 | |
12412 STATS LOCAL MSV -7.6531 0.72839 | |
12413 STATS LOCAL VITERBI -8.1622 0.72839 | |
12414 STATS LOCAL FORWARD -3.1511 0.72839 | |
12415 HMM A C G T | |
12416 m->m m->i m->d i->m i->i d->m d->d | |
12417 COMPO 1.18847 1.58865 1.48979 1.32542 | |
12418 1.38629 1.38629 1.38629 1.38629 | |
12419 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
12420 1 2.57915 2.25909 2.64442 0.28946 1 - - | |
12421 1.38629 1.38629 1.38629 1.38629 | |
12422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12423 2 2.57915 2.25909 2.64442 0.28946 2 - - | |
12424 1.38629 1.38629 1.38629 1.38629 | |
12425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12426 3 2.53331 3.02441 0.20344 2.88069 3 - - | |
12427 1.38629 1.38629 1.38629 1.38629 | |
12428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12429 4 2.57915 2.25909 2.64442 0.28946 4 - - | |
12430 1.38629 1.38629 1.38629 1.38629 | |
12431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12432 5 0.23862 2.84929 2.43386 2.70756 5 - - | |
12433 1.38629 1.38629 1.38629 1.38629 | |
12434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12435 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
12436 1.38629 1.38629 1.38629 1.38629 | |
12437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12438 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
12439 1.38629 1.38629 1.38629 1.38629 | |
12440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12441 8 0.23862 2.84929 2.43386 2.70756 8 - - | |
12442 1.38629 1.38629 1.38629 1.38629 | |
12443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12444 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
12445 1.38629 1.38629 1.38629 1.38629 | |
12446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12447 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
12448 1.38629 1.38629 1.38629 1.38629 | |
12449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12450 11 2.81865 0.23582 2.88868 2.35662 11 - - | |
12451 1.38629 1.38629 1.38629 1.38629 | |
12452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12453 12 0.23862 2.84929 2.43386 2.70756 12 - - | |
12454 1.38629 1.38629 1.38629 1.38629 | |
12455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12456 13 2.53331 3.02441 0.20344 2.88069 13 - - | |
12457 1.38629 1.38629 1.38629 1.38629 | |
12458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12459 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
12460 1.38629 1.38629 1.38629 1.38629 | |
12461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12462 15 2.53331 3.02441 0.20344 2.88069 15 - - | |
12463 1.38629 1.38629 1.38629 1.38629 | |
12464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12465 16 0.23862 2.84929 2.43386 2.70756 16 - - | |
12466 1.38629 1.38629 1.38629 1.38629 | |
12467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12468 17 0.23862 2.84929 2.43386 2.70756 17 - - | |
12469 1.38629 1.38629 1.38629 1.38629 | |
12470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12471 18 2.53331 3.02441 0.20344 2.88069 18 - - | |
12472 1.38629 1.38629 1.38629 1.38629 | |
12473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12474 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
12475 1.38629 1.38629 1.38629 1.38629 | |
12476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12477 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
12478 1.38629 1.38629 1.38629 1.38629 | |
12479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12480 21 2.81865 0.23582 2.88868 2.35662 21 - - | |
12481 1.38629 1.38629 1.38629 1.38629 | |
12482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12483 22 0.23862 2.84929 2.43386 2.70756 22 - - | |
12484 1.38629 1.38629 1.38629 1.38629 | |
12485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12486 23 2.57915 2.25909 2.64442 0.28946 23 - - | |
12487 1.38629 1.38629 1.38629 1.38629 | |
12488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12489 24 0.23862 2.84929 2.43386 2.70756 24 - - | |
12490 1.38629 1.38629 1.38629 1.38629 | |
12491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12492 25 2.57915 2.25909 2.64442 0.28946 25 - - | |
12493 1.38629 1.38629 1.38629 1.38629 | |
12494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12495 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
12496 1.38629 1.38629 1.38629 1.38629 | |
12497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12498 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
12499 1.38629 1.38629 1.38629 1.38629 | |
12500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12501 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
12502 1.38629 1.38629 1.38629 1.38629 | |
12503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12504 29 2.57915 2.25909 2.64442 0.28946 29 - - | |
12505 1.38629 1.38629 1.38629 1.38629 | |
12506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12507 30 2.53331 3.02441 0.20344 2.88069 30 - - | |
12508 1.38629 1.38629 1.38629 1.38629 | |
12509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12510 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
12511 1.38629 1.38629 1.38629 1.38629 | |
12512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12513 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
12514 1.38629 1.38629 1.38629 1.38629 | |
12515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12516 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
12517 1.38629 1.38629 1.38629 1.38629 | |
12518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12519 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
12520 1.38629 1.38629 1.38629 1.38629 | |
12521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12522 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
12523 1.38629 1.38629 1.38629 1.38629 | |
12524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12525 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
12526 1.38629 1.38629 1.38629 1.38629 | |
12527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12528 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
12529 1.38629 1.38629 1.38629 1.38629 | |
12530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12531 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
12532 1.38629 1.38629 1.38629 1.38629 | |
12533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12534 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
12535 1.38629 1.38629 1.38629 1.38629 | |
12536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12537 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
12538 1.38629 1.38629 1.38629 1.38629 | |
12539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12540 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
12541 1.38629 1.38629 1.38629 1.38629 | |
12542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12543 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
12544 1.38629 1.38629 1.38629 1.38629 | |
12545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12546 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
12547 1.38629 1.38629 1.38629 1.38629 | |
12548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12549 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
12550 1.38629 1.38629 1.38629 1.38629 | |
12551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12552 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
12553 1.38629 1.38629 1.38629 1.38629 | |
12554 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
12555 // | |
12556 HMMER3/b [3.0 | March 2010] | |
12557 NAME 4_LSU_Alveolata_4_LSU_start_seven_long | |
12558 LENG 45 | |
12559 ALPH DNA | |
12560 RF no | |
12561 CS no | |
12562 MAP yes | |
12563 DATE Thu Mar 1 14:40:49 2012 | |
12564 NSEQ 2 | |
12565 EFFN 2.000000 | |
12566 CKSUM 3028493390 | |
12567 STATS LOCAL MSV -7.5398 0.72776 | |
12568 STATS LOCAL VITERBI -8.1250 0.72776 | |
12569 STATS LOCAL FORWARD -3.1186 0.72776 | |
12570 HMM A C G T | |
12571 m->m m->i m->d i->m i->i d->m d->d | |
12572 COMPO 1.18774 1.47240 1.36573 1.55818 | |
12573 1.38629 1.38629 1.38629 1.38629 | |
12574 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * | |
12575 1 2.53331 3.02441 0.20344 2.88069 1 - - | |
12576 1.38629 1.38629 1.38629 1.38629 | |
12577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12578 2 0.23862 2.84929 2.43386 2.70756 2 - - | |
12579 1.38629 1.38629 1.38629 1.38629 | |
12580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12581 3 0.23862 2.84929 2.43386 2.70756 3 - - | |
12582 1.38629 1.38629 1.38629 1.38629 | |
12583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12584 4 0.23862 2.84929 2.43386 2.70756 4 - - | |
12585 1.38629 1.38629 1.38629 1.38629 | |
12586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12587 5 2.53331 3.02441 0.20344 2.88069 5 - - | |
12588 1.38629 1.38629 1.38629 1.38629 | |
12589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12590 6 2.53331 3.02441 0.20344 2.88069 6 - - | |
12591 1.38629 1.38629 1.38629 1.38629 | |
12592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12593 7 2.81865 0.23582 2.88868 2.35662 7 - - | |
12594 1.38629 1.38629 1.38629 1.38629 | |
12595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12596 8 2.81865 0.23582 2.88868 2.35662 8 - - | |
12597 1.38629 1.38629 1.38629 1.38629 | |
12598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12599 9 2.57915 2.25909 2.64442 0.28946 9 - - | |
12600 1.38629 1.38629 1.38629 1.38629 | |
12601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12602 10 2.53331 3.02441 0.20344 2.88069 10 - - | |
12603 1.38629 1.38629 1.38629 1.38629 | |
12604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12605 11 0.23862 2.84929 2.43386 2.70756 11 - - | |
12606 1.38629 1.38629 1.38629 1.38629 | |
12607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12608 12 2.53331 3.02441 0.20344 2.88069 12 - - | |
12609 1.38629 1.38629 1.38629 1.38629 | |
12610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12611 13 2.81865 0.23582 2.88868 2.35662 13 - - | |
12612 1.38629 1.38629 1.38629 1.38629 | |
12613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12614 14 2.57915 2.25909 2.64442 0.28946 14 - - | |
12615 1.38629 1.38629 1.38629 1.38629 | |
12616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12617 15 2.57915 2.25909 2.64442 0.28946 15 - - | |
12618 1.38629 1.38629 1.38629 1.38629 | |
12619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12620 16 2.53331 3.02441 0.20344 2.88069 16 - - | |
12621 1.38629 1.38629 1.38629 1.38629 | |
12622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12623 17 2.53331 3.02441 0.20344 2.88069 17 - - | |
12624 1.38629 1.38629 1.38629 1.38629 | |
12625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12626 18 0.23862 2.84929 2.43386 2.70756 18 - - | |
12627 1.38629 1.38629 1.38629 1.38629 | |
12628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12629 19 2.81865 0.23582 2.88868 2.35662 19 - - | |
12630 1.38629 1.38629 1.38629 1.38629 | |
12631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12632 20 0.23862 2.84929 2.43386 2.70756 20 - - | |
12633 1.38629 1.38629 1.38629 1.38629 | |
12634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12635 21 0.23862 2.84929 2.43386 2.70756 21 - - | |
12636 1.38629 1.38629 1.38629 1.38629 | |
12637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12638 22 2.53331 3.02441 0.20344 2.88069 22 - - | |
12639 1.38629 1.38629 1.38629 1.38629 | |
12640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12641 23 2.53331 3.02441 0.20344 2.88069 23 - - | |
12642 1.38629 1.38629 1.38629 1.38629 | |
12643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12644 24 2.81865 0.23582 2.88868 2.35662 24 - - | |
12645 1.38629 1.38629 1.38629 1.38629 | |
12646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12647 25 2.57915 2.25909 2.64442 0.28946 25 - - | |
12648 1.38629 1.38629 1.38629 1.38629 | |
12649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12650 26 0.23862 2.84929 2.43386 2.70756 26 - - | |
12651 1.38629 1.38629 1.38629 1.38629 | |
12652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12653 27 2.81865 0.23582 2.88868 2.35662 27 - - | |
12654 1.38629 1.38629 1.38629 1.38629 | |
12655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12656 28 2.81865 0.23582 2.88868 2.35662 28 - - | |
12657 1.38629 1.38629 1.38629 1.38629 | |
12658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12659 29 2.81865 0.23582 2.88868 2.35662 29 - - | |
12660 1.38629 1.38629 1.38629 1.38629 | |
12661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12662 30 0.23862 2.84929 2.43386 2.70756 30 - - | |
12663 1.38629 1.38629 1.38629 1.38629 | |
12664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12665 31 2.81865 0.23582 2.88868 2.35662 31 - - | |
12666 1.38629 1.38629 1.38629 1.38629 | |
12667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12668 32 2.57915 2.25909 2.64442 0.28946 32 - - | |
12669 1.38629 1.38629 1.38629 1.38629 | |
12670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12671 33 2.53331 3.02441 0.20344 2.88069 33 - - | |
12672 1.38629 1.38629 1.38629 1.38629 | |
12673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12674 34 0.23862 2.84929 2.43386 2.70756 34 - - | |
12675 1.38629 1.38629 1.38629 1.38629 | |
12676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12677 35 0.23862 2.84929 2.43386 2.70756 35 - - | |
12678 1.38629 1.38629 1.38629 1.38629 | |
12679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12680 36 2.57915 2.25909 2.64442 0.28946 36 - - | |
12681 1.38629 1.38629 1.38629 1.38629 | |
12682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12683 37 2.57915 2.25909 2.64442 0.28946 37 - - | |
12684 1.38629 1.38629 1.38629 1.38629 | |
12685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12686 38 2.57915 2.25909 2.64442 0.28946 38 - - | |
12687 1.38629 1.38629 1.38629 1.38629 | |
12688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12689 39 0.23862 2.84929 2.43386 2.70756 39 - - | |
12690 1.38629 1.38629 1.38629 1.38629 | |
12691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12692 40 0.23862 2.84929 2.43386 2.70756 40 - - | |
12693 1.38629 1.38629 1.38629 1.38629 | |
12694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12695 41 2.53331 3.02441 0.20344 2.88069 41 - - | |
12696 1.38629 1.38629 1.38629 1.38629 | |
12697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12698 42 2.81865 0.23582 2.88868 2.35662 42 - - | |
12699 1.38629 1.38629 1.38629 1.38629 | |
12700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12701 43 0.23862 2.84929 2.43386 2.70756 43 - - | |
12702 1.38629 1.38629 1.38629 1.38629 | |
12703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12704 44 2.57915 2.25909 2.64442 0.28946 44 - - | |
12705 1.38629 1.38629 1.38629 1.38629 | |
12706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 | |
12707 45 0.23862 2.84929 2.43386 2.70756 45 - - | |
12708 1.38629 1.38629 1.38629 1.38629 | |
12709 0.02469 3.71357 * 1.46634 0.26236 0.00000 * | |
12710 // | |
12711 HMMER3/b [3.0 | March 2010] | |
12712 NAME 4_LSU_Alveolata_4_LSU_start_six_long | |
12713 LENG 45 | |
12714 ALPH DNA | |
12715 RF no | |
12716 CS no | |
12717 MAP yes | |
12718 DATE Thu Mar 1 14:40:41 2012 | |
12719 NSEQ 10 | |
12720 EFFN 3.530273 | |
12721 CKSUM 1801102075 | |
12722 STATS LOCAL MSV -7.6787 0.71931 | |
12723 STATS LOCAL VITERBI -7.8111 0.71931 | |
12724 STATS LOCAL FORWARD -3.8984 0.71931 | |
12725 HMM A C G T | |
12726 m->m m->i m->d i->m i->i d->m d->d | |
12727 COMPO 1.05070 1.31736 1.76014 1.55853 | |
12728 1.38629 1.38629 1.38629 1.38629 | |
12729 0.03553 4.04835 4.04835 1.46634 0.26236 0.00000 * | |
12730 1 3.15391 2.63661 3.19954 0.16850 1 - - | |
12731 1.38629 1.38629 1.38629 1.38629 | |
12732 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12733 2 3.15391 2.63661 3.19954 0.16850 2 - - | |
12734 1.38629 1.38629 1.38629 1.38629 | |
12735 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12736 3 1.71207 2.06815 1.14271 0.98314 3 - - | |
12737 1.38629 1.38629 1.38629 1.38629 | |
12738 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12739 4 0.23016 3.12439 2.18555 3.01164 4 - - | |
12740 1.38629 1.38629 1.38629 1.38629 | |
12741 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12742 5 3.50695 0.12174 3.55321 2.88245 5 - - | |
12743 1.38629 1.38629 1.38629 1.38629 | |
12744 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12745 6 0.13370 3.44448 2.84348 3.35230 6 - - | |
12746 1.38629 1.38629 1.38629 1.38629 | |
12747 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12748 7 3.50695 0.12174 3.55321 2.88245 7 - - | |
12749 1.38629 1.38629 1.38629 1.38629 | |
12750 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12751 8 3.50695 0.12174 3.55321 2.88245 8 - - | |
12752 1.38629 1.38629 1.38629 1.38629 | |
12753 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12754 9 3.15391 2.63661 3.19954 0.16850 9 - - | |
12755 1.38629 1.38629 1.38629 1.38629 | |
12756 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12757 10 2.99181 3.65250 0.11032 3.56399 10 - - | |
12758 1.38629 1.38629 1.38629 1.38629 | |
12759 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12760 11 0.13370 3.44448 2.84348 3.35230 11 - - | |
12761 1.38629 1.38629 1.38629 1.38629 | |
12762 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12763 12 0.13370 3.44448 2.84348 3.35230 12 - - | |
12764 1.38629 1.38629 1.38629 1.38629 | |
12765 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12766 13 0.13370 3.44448 2.84348 3.35230 13 - - | |
12767 1.38629 1.38629 1.38629 1.38629 | |
12768 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12769 14 3.15391 2.63661 3.19954 0.16850 14 - - | |
12770 1.38629 1.38629 1.38629 1.38629 | |
12771 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12772 15 3.50695 0.12174 3.55321 2.88245 15 - - | |
12773 1.38629 1.38629 1.38629 1.38629 | |
12774 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12775 16 0.13370 3.44448 2.84348 3.35230 16 - - | |
12776 1.38629 1.38629 1.38629 1.38629 | |
12777 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12778 17 0.13370 3.44448 2.84348 3.35230 17 - - | |
12779 1.38629 1.38629 1.38629 1.38629 | |
12780 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12781 18 2.99181 3.65250 0.11032 3.56399 18 - - | |
12782 1.38629 1.38629 1.38629 1.38629 | |
12783 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12784 19 3.50695 0.12174 3.55321 2.88245 19 - - | |
12785 1.38629 1.38629 1.38629 1.38629 | |
12786 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12787 20 0.13370 3.44448 2.84348 3.35230 20 - - | |
12788 1.38629 1.38629 1.38629 1.38629 | |
12789 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12790 21 0.13370 3.44448 2.84348 3.35230 21 - - | |
12791 1.38629 1.38629 1.38629 1.38629 | |
12792 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12793 22 2.99181 3.65250 0.11032 3.56399 22 - - | |
12794 1.38629 1.38629 1.38629 1.38629 | |
12795 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12796 23 0.13370 3.44448 2.84348 3.35230 23 - - | |
12797 1.38629 1.38629 1.38629 1.38629 | |
12798 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12799 24 2.07180 2.39292 2.65785 0.33886 24 - - | |
12800 1.38629 1.38629 1.38629 1.38629 | |
12801 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12802 25 3.50695 0.12174 3.55321 2.88245 25 - - | |
12803 1.38629 1.38629 1.38629 1.38629 | |
12804 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12805 26 0.13370 3.44448 2.84348 3.35230 26 - - | |
12806 1.38629 1.38629 1.38629 1.38629 | |
12807 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12808 27 3.50695 0.12174 3.55321 2.88245 27 - - | |
12809 1.38629 1.38629 1.38629 1.38629 | |
12810 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12811 28 3.50695 0.12174 3.55321 2.88245 28 - - | |
12812 1.38629 1.38629 1.38629 1.38629 | |
12813 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12814 29 3.50695 0.12174 3.55321 2.88245 29 - - | |
12815 1.38629 1.38629 1.38629 1.38629 | |
12816 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12817 30 2.99181 3.65250 0.11032 3.56399 30 - - | |
12818 1.38629 1.38629 1.38629 1.38629 | |
12819 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12820 31 3.50695 0.12174 3.55321 2.88245 31 - - | |
12821 1.38629 1.38629 1.38629 1.38629 | |
12822 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12823 32 3.15391 2.63661 3.19954 0.16850 32 - - | |
12824 1.38629 1.38629 1.38629 1.38629 | |
12825 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12826 33 2.99181 3.65250 0.11032 3.56399 33 - - | |
12827 1.38629 1.38629 1.38629 1.38629 | |
12828 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12829 34 0.13370 3.44448 2.84348 3.35230 34 - - | |
12830 1.38629 1.38629 1.38629 1.38629 | |
12831 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12832 35 0.13370 3.44448 2.84348 3.35230 35 - - | |
12833 1.38629 1.38629 1.38629 1.38629 | |
12834 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12835 36 3.50695 0.12174 3.55321 2.88245 36 - - | |
12836 1.38629 1.38629 1.38629 1.38629 | |
12837 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12838 37 3.15391 2.63661 3.19954 0.16850 37 - - | |
12839 1.38629 1.38629 1.38629 1.38629 | |
12840 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12841 38 3.15391 2.63661 3.19954 0.16850 38 - - | |
12842 1.38629 1.38629 1.38629 1.38629 | |
12843 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12844 39 0.13370 3.44448 2.84348 3.35230 39 - - | |
12845 1.38629 1.38629 1.38629 1.38629 | |
12846 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12847 40 0.13370 3.44448 2.84348 3.35230 40 - - | |
12848 1.38629 1.38629 1.38629 1.38629 | |
12849 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12850 41 2.99181 3.65250 0.11032 3.56399 41 - - | |
12851 1.38629 1.38629 1.38629 1.38629 | |
12852 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12853 42 3.50695 0.12174 3.55321 2.88245 42 - - | |
12854 1.38629 1.38629 1.38629 1.38629 | |
12855 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12856 43 0.13370 3.44448 2.84348 3.35230 43 - - | |
12857 1.38629 1.38629 1.38629 1.38629 | |
12858 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12859 44 3.15391 2.63661 3.19954 0.16850 44 - - | |
12860 1.38629 1.38629 1.38629 1.38629 | |
12861 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547 | |
12862 45 0.13370 3.44448 2.84348 3.35230 45 - - | |
12863 1.38629 1.38629 1.38629 1.38629 | |
12864 0.01792 4.03074 * 1.46634 0.26236 0.00000 * | |
12865 // | |
12866 HMMER3/b [3.0 | March 2010] | |
12867 NAME 4_LSU_Alveolata_4_LSU_start_ten_long | |
12868 LENG 45 | |
12869 ALPH DNA | |
12870 RF no | |
12871 CS no | |
12872 MAP yes | |
12873 DATE Thu Mar 1 14:41:15 2012 | |
12874 NSEQ 9 | |
12875 EFFN 3.827637 | |
12876 CKSUM 3971025725 | |
12877 STATS LOCAL MSV -7.3204 0.71932 | |
12878 STATS LOCAL VITERBI -7.7155 0.71932 | |
12879 STATS LOCAL FORWARD -4.1318 0.71932 | |
12880 HMM A C G T | |
12881 m->m m->i m->d i->m i->i d->m d->d | |
12882 COMPO 1.23642 1.73329 1.50126 1.17110 | |
12883 1.38629 1.38629 1.38629 1.38629 | |
12884 0.03374 4.09894 4.09894 1.46634 0.26236 0.00000 * | |
12885 1 3.24149 2.69213 3.28371 0.15587 1 - - | |
12886 1.38629 1.38629 1.38629 1.38629 | |
12887 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12888 2 3.24149 2.69213 3.28371 0.15587 2 - - | |
12889 1.38629 1.38629 1.38629 1.38629 | |
12890 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12891 3 0.67762 2.30348 2.25602 1.24654 3 - - | |
12892 1.38629 1.38629 1.38629 1.38629 | |
12893 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12894 4 3.04875 3.73654 0.10210 3.65714 4 - - | |
12895 1.38629 1.38629 1.38629 1.38629 | |
12896 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12897 5 3.24149 2.69213 3.28371 0.15587 5 - - | |
12898 1.38629 1.38629 1.38629 1.38629 | |
12899 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12900 6 3.24149 2.69213 3.28371 0.15587 6 - - | |
12901 1.38629 1.38629 1.38629 1.38629 | |
12902 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12903 7 3.60365 0.11159 3.64557 2.95161 7 - - | |
12904 1.38629 1.38629 1.38629 1.38629 | |
12905 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12906 8 3.16295 0.21850 3.22065 2.17116 8 - - | |
12907 1.38629 1.38629 1.38629 1.38629 | |
12908 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12909 9 3.24149 2.69213 3.28371 0.15587 9 - - | |
12910 1.38629 1.38629 1.38629 1.38629 | |
12911 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12912 10 3.04875 3.73654 0.10210 3.65714 10 - - | |
12913 1.38629 1.38629 1.38629 1.38629 | |
12914 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12915 11 0.12371 3.52912 2.89791 3.44523 11 - - | |
12916 1.38629 1.38629 1.38629 1.38629 | |
12917 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12918 12 3.04875 3.73654 0.10210 3.65714 12 - - | |
12919 1.38629 1.38629 1.38629 1.38629 | |
12920 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12921 13 0.12371 3.52912 2.89791 3.44523 13 - - | |
12922 1.38629 1.38629 1.38629 1.38629 | |
12923 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12924 14 3.24149 2.69213 3.28371 0.15587 14 - - | |
12925 1.38629 1.38629 1.38629 1.38629 | |
12926 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12927 15 3.24149 2.69213 3.28371 0.15587 15 - - | |
12928 1.38629 1.38629 1.38629 1.38629 | |
12929 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12930 16 3.04875 3.73654 0.10210 3.65714 16 - - | |
12931 1.38629 1.38629 1.38629 1.38629 | |
12932 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12933 17 3.04875 3.73654 0.10210 3.65714 17 - - | |
12934 1.38629 1.38629 1.38629 1.38629 | |
12935 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12936 18 3.04875 3.73654 0.10210 3.65714 18 - - | |
12937 1.38629 1.38629 1.38629 1.38629 | |
12938 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12939 19 3.24149 2.69213 3.28371 0.15587 19 - - | |
12940 1.38629 1.38629 1.38629 1.38629 | |
12941 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12942 20 3.04875 3.73654 0.10210 3.65714 20 - - | |
12943 1.38629 1.38629 1.38629 1.38629 | |
12944 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12945 21 0.12371 3.52912 2.89791 3.44523 21 - - | |
12946 1.38629 1.38629 1.38629 1.38629 | |
12947 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12948 22 3.04875 3.73654 0.10210 3.65714 22 - - | |
12949 1.38629 1.38629 1.38629 1.38629 | |
12950 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12951 23 0.21841 3.20443 2.20335 3.09683 23 - - | |
12952 1.38629 1.38629 1.38629 1.38629 | |
12953 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12954 24 2.80375 0.37853 2.87066 1.62006 24 - - | |
12955 1.38629 1.38629 1.38629 1.38629 | |
12956 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12957 25 2.39794 2.30920 1.65829 0.47918 25 - - | |
12958 1.38629 1.38629 1.38629 1.38629 | |
12959 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12960 26 0.12371 3.52912 2.89791 3.44523 26 - - | |
12961 1.38629 1.38629 1.38629 1.38629 | |
12962 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12963 27 3.24149 2.69213 3.28371 0.15587 27 - - | |
12964 1.38629 1.38629 1.38629 1.38629 | |
12965 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12966 28 3.60365 0.11159 3.64557 2.95161 28 - - | |
12967 1.38629 1.38629 1.38629 1.38629 | |
12968 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12969 29 3.60365 0.11159 3.64557 2.95161 29 - - | |
12970 1.38629 1.38629 1.38629 1.38629 | |
12971 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12972 30 0.12371 3.52912 2.89791 3.44523 30 - - | |
12973 1.38629 1.38629 1.38629 1.38629 | |
12974 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12975 31 3.60365 0.11159 3.64557 2.95161 31 - - | |
12976 1.38629 1.38629 1.38629 1.38629 | |
12977 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12978 32 3.24149 2.69213 3.28371 0.15587 32 - - | |
12979 1.38629 1.38629 1.38629 1.38629 | |
12980 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12981 33 3.04875 3.73654 0.10210 3.65714 33 - - | |
12982 1.38629 1.38629 1.38629 1.38629 | |
12983 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12984 34 0.12371 3.52912 2.89791 3.44523 34 - - | |
12985 1.38629 1.38629 1.38629 1.38629 | |
12986 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12987 35 0.12371 3.52912 2.89791 3.44523 35 - - | |
12988 1.38629 1.38629 1.38629 1.38629 | |
12989 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12990 36 3.24149 2.69213 3.28371 0.15587 36 - - | |
12991 1.38629 1.38629 1.38629 1.38629 | |
12992 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12993 37 3.24149 2.69213 3.28371 0.15587 37 - - | |
12994 1.38629 1.38629 1.38629 1.38629 | |
12995 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12996 38 3.24149 2.69213 3.28371 0.15587 38 - - | |
12997 1.38629 1.38629 1.38629 1.38629 | |
12998 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
12999 39 0.12371 3.52912 2.89791 3.44523 39 - - | |
13000 1.38629 1.38629 1.38629 1.38629 | |
13001 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13002 40 0.12371 3.52912 2.89791 3.44523 40 - - | |
13003 1.38629 1.38629 1.38629 1.38629 | |
13004 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13005 41 0.12371 3.52912 2.89791 3.44523 41 - - | |
13006 1.38629 1.38629 1.38629 1.38629 | |
13007 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13008 42 3.60365 0.11159 3.64557 2.95161 42 - - | |
13009 1.38629 1.38629 1.38629 1.38629 | |
13010 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13011 43 0.12371 3.52912 2.89791 3.44523 43 - - | |
13012 1.38629 1.38629 1.38629 1.38629 | |
13013 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13014 44 3.24149 2.69213 3.28371 0.15587 44 - - | |
13015 1.38629 1.38629 1.38629 1.38629 | |
13016 0.03374 4.09894 4.09894 1.46634 0.26236 1.09861 0.40547 | |
13017 45 0.12371 3.52912 2.89791 3.44523 45 - - | |
13018 1.38629 1.38629 1.38629 1.38629 | |
13019 0.01701 4.08221 * 1.46634 0.26236 0.00000 * | |
13020 // | |
13021 HMMER3/b [3.0 | March 2010] | |
13022 NAME 4_LSU_Alveolata_4_LSU_start_thirteen_long | |
13023 LENG 45 | |
13024 ALPH DNA | |
13025 RF no | |
13026 CS no | |
13027 MAP yes | |
13028 DATE Thu Mar 1 14:42:05 2012 | |
13029 NSEQ 24 | |
13030 EFFN 3.893555 | |
13031 CKSUM 191642901 | |
13032 STATS LOCAL MSV -7.2444 0.71933 | |
13033 STATS LOCAL VITERBI -7.7058 0.71933 | |
13034 STATS LOCAL FORWARD -4.3034 0.71933 | |
13035 HMM A C G T | |
13036 m->m m->i m->d i->m i->i d->m d->d | |
13037 COMPO 1.16586 1.50746 1.51087 1.40179 | |
13038 1.38629 1.38629 1.38629 1.38629 | |
13039 0.03337 4.10982 4.10982 1.46634 0.26236 0.00000 * | |
13040 1 1.46824 2.04571 2.31358 0.61346 1 - - | |
13041 1.38629 1.38629 1.38629 1.38629 | |
13042 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13043 2 1.05286 2.20903 2.24595 0.83143 2 - - | |
13044 1.38629 1.38629 1.38629 1.38629 | |
13045 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13046 3 2.32070 1.97985 2.68818 0.36284 3 - - | |
13047 1.38629 1.38629 1.38629 1.38629 | |
13048 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13049 4 0.12173 3.54680 2.90925 3.46466 4 - - | |
13050 1.38629 1.38629 1.38629 1.38629 | |
13051 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13052 5 3.06047 3.75390 0.10049 3.67641 5 - - | |
13053 1.38629 1.38629 1.38629 1.38629 | |
13054 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13055 6 0.12173 3.54680 2.90925 3.46466 6 - - | |
13056 1.38629 1.38629 1.38629 1.38629 | |
13057 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13058 7 3.62373 0.10960 3.66473 2.96588 7 - - | |
13059 1.38629 1.38629 1.38629 1.38629 | |
13060 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13061 8 3.62373 0.10960 3.66473 2.96588 8 - - | |
13062 1.38629 1.38629 1.38629 1.38629 | |
13063 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13064 9 3.26001 2.70388 3.30149 0.15334 9 - - | |
13065 1.38629 1.38629 1.38629 1.38629 | |
13066 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13067 10 3.06047 3.75390 0.10049 3.67641 10 - - | |
13068 1.38629 1.38629 1.38629 1.38629 | |
13069 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13070 11 0.12173 3.54680 2.90925 3.46466 11 - - | |
13071 1.38629 1.38629 1.38629 1.38629 | |
13072 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13073 12 0.12173 3.54680 2.90925 3.46466 12 - - | |
13074 1.38629 1.38629 1.38629 1.38629 | |
13075 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13076 13 0.12173 3.54680 2.90925 3.46466 13 - - | |
13077 1.38629 1.38629 1.38629 1.38629 | |
13078 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13079 14 3.26001 2.70388 3.30149 0.15334 14 - - | |
13080 1.38629 1.38629 1.38629 1.38629 | |
13081 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13082 15 3.62373 0.10960 3.66473 2.96588 15 - - | |
13083 1.38629 1.38629 1.38629 1.38629 | |
13084 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13085 16 0.12173 3.54680 2.90925 3.46466 16 - - | |
13086 1.38629 1.38629 1.38629 1.38629 | |
13087 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13088 17 3.06047 3.75390 0.10049 3.67641 17 - - | |
13089 1.38629 1.38629 1.38629 1.38629 | |
13090 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13091 18 2.54857 2.39251 1.90817 0.38264 18 - - | |
13092 1.38629 1.38629 1.38629 1.38629 | |
13093 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13094 19 3.62373 0.10960 3.66473 2.96588 19 - - | |
13095 1.38629 1.38629 1.38629 1.38629 | |
13096 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13097 20 3.06047 3.75390 0.10049 3.67641 20 - - | |
13098 1.38629 1.38629 1.38629 1.38629 | |
13099 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13100 21 0.12173 3.54680 2.90925 3.46466 21 - - | |
13101 1.38629 1.38629 1.38629 1.38629 | |
13102 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13103 22 3.06047 3.75390 0.10049 3.67641 22 - - | |
13104 1.38629 1.38629 1.38629 1.38629 | |
13105 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13106 23 2.39260 3.42516 0.17435 3.32257 23 - - | |
13107 1.38629 1.38629 1.38629 1.38629 | |
13108 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13109 24 3.10643 2.32027 3.15457 0.20538 24 - - | |
13110 1.38629 1.38629 1.38629 1.38629 | |
13111 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13112 25 3.26001 2.70388 3.30149 0.15334 25 - - | |
13113 1.38629 1.38629 1.38629 1.38629 | |
13114 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13115 26 0.12173 3.54680 2.90925 3.46466 26 - - | |
13116 1.38629 1.38629 1.38629 1.38629 | |
13117 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13118 27 3.62373 0.10960 3.66473 2.96588 27 - - | |
13119 1.38629 1.38629 1.38629 1.38629 | |
13120 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13121 28 3.62373 0.10960 3.66473 2.96588 28 - - | |
13122 1.38629 1.38629 1.38629 1.38629 | |
13123 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13124 29 3.62373 0.10960 3.66473 2.96588 29 - - | |
13125 1.38629 1.38629 1.38629 1.38629 | |
13126 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13127 30 3.06047 3.75390 0.10049 3.67641 30 - - | |
13128 1.38629 1.38629 1.38629 1.38629 | |
13129 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13130 31 3.62373 0.10960 3.66473 2.96588 31 - - | |
13131 1.38629 1.38629 1.38629 1.38629 | |
13132 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13133 32 3.26001 2.70388 3.30149 0.15334 32 - - | |
13134 1.38629 1.38629 1.38629 1.38629 | |
13135 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13136 33 3.06047 3.75390 0.10049 3.67641 33 - - | |
13137 1.38629 1.38629 1.38629 1.38629 | |
13138 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13139 34 0.12173 3.54680 2.90925 3.46466 34 - - | |
13140 1.38629 1.38629 1.38629 1.38629 | |
13141 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13142 35 0.12173 3.54680 2.90925 3.46466 35 - - | |
13143 1.38629 1.38629 1.38629 1.38629 | |
13144 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13145 36 2.88119 1.85984 2.93863 0.30748 36 - - | |
13146 1.38629 1.38629 1.38629 1.38629 | |
13147 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13148 37 3.26001 2.70388 3.30149 0.15334 37 - - | |
13149 1.38629 1.38629 1.38629 1.38629 | |
13150 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13151 38 3.26001 2.70388 3.30149 0.15334 38 - - | |
13152 1.38629 1.38629 1.38629 1.38629 | |
13153 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13154 39 0.12173 3.54680 2.90925 3.46466 39 - - | |
13155 1.38629 1.38629 1.38629 1.38629 | |
13156 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13157 40 0.12173 3.54680 2.90925 3.46466 40 - - | |
13158 1.38629 1.38629 1.38629 1.38629 | |
13159 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13160 41 3.06047 3.75390 0.10049 3.67641 41 - - | |
13161 1.38629 1.38629 1.38629 1.38629 | |
13162 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13163 42 3.62373 0.10960 3.66473 2.96588 42 - - | |
13164 1.38629 1.38629 1.38629 1.38629 | |
13165 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13166 43 0.12173 3.54680 2.90925 3.46466 43 - - | |
13167 1.38629 1.38629 1.38629 1.38629 | |
13168 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13169 44 3.26001 2.70388 3.30149 0.15334 44 - - | |
13170 1.38629 1.38629 1.38629 1.38629 | |
13171 0.03337 4.10982 4.10982 1.46634 0.26236 1.09861 0.40547 | |
13172 45 0.12173 3.54680 2.90925 3.46466 45 - - | |
13173 1.38629 1.38629 1.38629 1.38629 | |
13174 0.01683 4.09327 * 1.46634 0.26236 0.00000 * | |
13175 // | |
13176 HMMER3/b [3.0 | March 2010] | |
13177 NAME 4_LSU_Alveolata_4_LSU_start_two_long | |
13178 LENG 45 | |
13179 ALPH DNA | |
13180 RF no | |
13181 CS no | |
13182 MAP yes | |
13183 DATE Thu Mar 1 14:39:59 2012 | |
13184 NSEQ 8 | |
13185 EFFN 3.683594 | |
13186 CKSUM 435453820 | |
13187 STATS LOCAL MSV -7.5820 0.71933 | |
13188 STATS LOCAL VITERBI -7.6593 0.71933 | |
13189 STATS LOCAL FORWARD -3.8838 0.71933 | |
13190 HMM A C G T | |
13191 m->m m->i m->d i->m i->i d->m d->d | |
13192 COMPO 1.11795 1.68208 1.35544 1.47302 | |
13193 1.38629 1.38629 1.38629 1.38629 | |
13194 0.03458 4.07475 4.07475 1.46634 0.26236 0.00000 * | |
13195 1 3.02205 3.69704 0.10587 3.61333 1 - - | |
13196 1.38629 1.38629 1.38629 1.38629 | |
13197 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13198 2 0.98857 1.72053 2.09224 1.12236 2 - - | |
13199 1.38629 1.38629 1.38629 1.38629 | |
13200 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13201 3 3.02205 3.69704 0.10587 3.61333 3 - - | |
13202 1.38629 1.38629 1.38629 1.38629 | |
13203 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13204 4 0.12832 3.48915 2.87223 3.40132 4 - - | |
13205 1.38629 1.38629 1.38629 1.38629 | |
13206 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13207 5 3.02205 3.69704 0.10587 3.61333 5 - - | |
13208 1.38629 1.38629 1.38629 1.38629 | |
13209 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13210 6 0.12832 3.48915 2.87223 3.40132 6 - - | |
13211 1.38629 1.38629 1.38629 1.38629 | |
13212 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13213 7 3.55808 0.11624 3.60208 2.91913 7 - - | |
13214 1.38629 1.38629 1.38629 1.38629 | |
13215 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13216 8 0.12832 3.48915 2.87223 3.40132 8 - - | |
13217 1.38629 1.38629 1.38629 1.38629 | |
13218 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13219 9 3.19991 2.66577 3.24376 0.16173 9 - - | |
13220 1.38629 1.38629 1.38629 1.38629 | |
13221 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13222 10 3.02205 3.69704 0.10587 3.61333 10 - - | |
13223 1.38629 1.38629 1.38629 1.38629 | |
13224 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13225 11 0.12832 3.48915 2.87223 3.40132 11 - - | |
13226 1.38629 1.38629 1.38629 1.38629 | |
13227 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13228 12 0.12832 3.48915 2.87223 3.40132 12 - - | |
13229 1.38629 1.38629 1.38629 1.38629 | |
13230 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13231 13 3.02205 3.69704 0.10587 3.61333 13 - - | |
13232 1.38629 1.38629 1.38629 1.38629 | |
13233 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13234 14 3.19991 2.66577 3.24376 0.16173 14 - - | |
13235 1.38629 1.38629 1.38629 1.38629 | |
13236 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13237 15 3.19991 2.66577 3.24376 0.16173 15 - - | |
13238 1.38629 1.38629 1.38629 1.38629 | |
13239 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13240 16 0.12832 3.48915 2.87223 3.40132 16 - - | |
13241 1.38629 1.38629 1.38629 1.38629 | |
13242 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13243 17 3.02205 3.69704 0.10587 3.61333 17 - - | |
13244 1.38629 1.38629 1.38629 1.38629 | |
13245 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13246 18 3.02205 3.69704 0.10587 3.61333 18 - - | |
13247 1.38629 1.38629 1.38629 1.38629 | |
13248 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13249 19 3.55808 0.11624 3.60208 2.91913 19 - - | |
13250 1.38629 1.38629 1.38629 1.38629 | |
13251 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13252 20 3.19991 2.66577 3.24376 0.16173 20 - - | |
13253 1.38629 1.38629 1.38629 1.38629 | |
13254 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13255 21 0.49923 1.63631 2.32597 2.29642 21 - - | |
13256 1.38629 1.38629 1.38629 1.38629 | |
13257 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13258 22 3.02205 3.69704 0.10587 3.61333 22 - - | |
13259 1.38629 1.38629 1.38629 1.38629 | |
13260 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13261 23 3.55808 0.11624 3.60208 2.91913 23 - - | |
13262 1.38629 1.38629 1.38629 1.38629 | |
13263 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13264 24 0.12832 3.48915 2.87223 3.40132 24 - - | |
13265 1.38629 1.38629 1.38629 1.38629 | |
13266 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13267 25 0.60696 1.83062 2.18714 1.70132 25 - - | |
13268 1.38629 1.38629 1.38629 1.38629 | |
13269 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13270 26 0.12832 3.48915 2.87223 3.40132 26 - - | |
13271 1.38629 1.38629 1.38629 1.38629 | |
13272 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13273 27 3.55808 0.11624 3.60208 2.91913 27 - - | |
13274 1.38629 1.38629 1.38629 1.38629 | |
13275 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13276 28 3.55808 0.11624 3.60208 2.91913 28 - - | |
13277 1.38629 1.38629 1.38629 1.38629 | |
13278 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13279 29 3.19991 2.66577 3.24376 0.16173 29 - - | |
13280 1.38629 1.38629 1.38629 1.38629 | |
13281 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13282 30 3.02205 3.69704 0.10587 3.61333 30 - - | |
13283 1.38629 1.38629 1.38629 1.38629 | |
13284 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13285 31 3.55808 0.11624 3.60208 2.91913 31 - - | |
13286 1.38629 1.38629 1.38629 1.38629 | |
13287 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13288 32 3.19991 2.66577 3.24376 0.16173 32 - - | |
13289 1.38629 1.38629 1.38629 1.38629 | |
13290 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13291 33 3.02205 3.69704 0.10587 3.61333 33 - - | |
13292 1.38629 1.38629 1.38629 1.38629 | |
13293 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13294 34 0.12832 3.48915 2.87223 3.40132 34 - - | |
13295 1.38629 1.38629 1.38629 1.38629 | |
13296 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13297 35 0.12832 3.48915 2.87223 3.40132 35 - - | |
13298 1.38629 1.38629 1.38629 1.38629 | |
13299 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13300 36 3.19991 2.66577 3.24376 0.16173 36 - - | |
13301 1.38629 1.38629 1.38629 1.38629 | |
13302 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13303 37 3.19991 2.66577 3.24376 0.16173 37 - - | |
13304 1.38629 1.38629 1.38629 1.38629 | |
13305 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13306 38 3.19991 2.66577 3.24376 0.16173 38 - - | |
13307 1.38629 1.38629 1.38629 1.38629 | |
13308 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13309 39 0.12832 3.48915 2.87223 3.40132 39 - - | |
13310 1.38629 1.38629 1.38629 1.38629 | |
13311 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13312 40 0.12832 3.48915 2.87223 3.40132 40 - - | |
13313 1.38629 1.38629 1.38629 1.38629 | |
13314 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13315 41 3.02205 3.69704 0.10587 3.61333 41 - - | |
13316 1.38629 1.38629 1.38629 1.38629 | |
13317 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13318 42 3.55808 0.11624 3.60208 2.91913 42 - - | |
13319 1.38629 1.38629 1.38629 1.38629 | |
13320 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13321 43 0.12832 3.48915 2.87223 3.40132 43 - - | |
13322 1.38629 1.38629 1.38629 1.38629 | |
13323 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13324 44 3.19991 2.66577 3.24376 0.16173 44 - - | |
13325 1.38629 1.38629 1.38629 1.38629 | |
13326 0.03458 4.07475 4.07475 1.46634 0.26236 1.09861 0.40547 | |
13327 45 0.12832 3.48915 2.87223 3.40132 45 - - | |
13328 1.38629 1.38629 1.38629 1.38629 | |
13329 0.01744 4.05761 * 1.46634 0.26236 0.00000 * | |
13330 // | |
13331 HMMER3/b [3.0 | March 2010] | |
13332 NAME 1_SSU_Alveolata_1_SSU_end_one_long | |
13333 LENG 45 | |
13334 ALPH DNA | |
13335 RF no | |
13336 CS no | |
13337 MAP yes | |
13338 DATE Sat Jan 28 01:43:03 2012 | |
13339 NSEQ 69 | |
13340 EFFN 3.642883 | |
13341 CKSUM 3148699463 | |
13342 STATS LOCAL MSV -7.4489 0.71932 | |
13343 STATS LOCAL VITERBI -7.6281 0.71932 | |
13344 STATS LOCAL FORWARD -4.1382 0.71932 | |
13345 HMM A C G T | |
13346 m->m m->i m->d i->m i->i d->m d->d | |
13347 COMPO 1.33776 1.55982 1.24507 1.42932 | |
13348 1.38629 1.38629 1.38629 1.38629 | |
13349 0.03483 4.06781 4.06781 1.46634 0.26236 0.00000 * | |
13350 1 0.12970 3.47751 2.86475 3.38854 1 - - | |
13351 1.38629 1.38629 1.38629 1.38629 | |
13352 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13353 2 2.93148 3.51149 0.13230 3.20034 2 - - | |
13354 1.38629 1.38629 1.38629 1.38629 | |
13355 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13356 3 3.18787 2.65814 3.23219 0.16347 3 - - | |
13357 1.38629 1.38629 1.38629 1.38629 | |
13358 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13359 4 3.54478 0.11764 3.58937 2.90961 4 - - | |
13360 1.38629 1.38629 1.38629 1.38629 | |
13361 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13362 5 3.01421 3.68548 0.10701 3.60051 5 - - | |
13363 1.38629 1.38629 1.38629 1.38629 | |
13364 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13365 6 3.18787 2.65814 3.23219 0.16347 6 - - | |
13366 1.38629 1.38629 1.38629 1.38629 | |
13367 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13368 7 0.12970 3.47751 2.86475 3.38854 7 - - | |
13369 1.38629 1.38629 1.38629 1.38629 | |
13370 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13371 8 0.12970 3.47751 2.86475 3.38854 8 - - | |
13372 1.38629 1.38629 1.38629 1.38629 | |
13373 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13374 9 3.54478 0.11764 3.58937 2.90961 9 - - | |
13375 1.38629 1.38629 1.38629 1.38629 | |
13376 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13377 10 0.12970 3.47751 2.86475 3.38854 10 - - | |
13378 1.38629 1.38629 1.38629 1.38629 | |
13379 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13380 11 0.36931 1.96424 2.44668 2.50172 11 - - | |
13381 1.38629 1.38629 1.38629 1.38629 | |
13382 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13383 12 2.93148 3.51149 0.13230 3.20034 12 - - | |
13384 1.38629 1.38629 1.38629 1.38629 | |
13385 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13386 13 3.01421 3.68548 0.10701 3.60051 13 - - | |
13387 1.38629 1.38629 1.38629 1.38629 | |
13388 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13389 14 3.18787 2.65814 3.23219 0.16347 14 - - | |
13390 1.38629 1.38629 1.38629 1.38629 | |
13391 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13392 15 2.33627 2.48307 2.82552 0.27372 15 - - | |
13393 1.38629 1.38629 1.38629 1.38629 | |
13394 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13395 16 3.18787 2.65814 3.23219 0.16347 16 - - | |
13396 1.38629 1.38629 1.38629 1.38629 | |
13397 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13398 17 3.54478 0.11764 3.58937 2.90961 17 - - | |
13399 1.38629 1.38629 1.38629 1.38629 | |
13400 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13401 18 3.19125 0.20146 3.24795 2.27802 18 - - | |
13402 1.38629 1.38629 1.38629 1.38629 | |
13403 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13404 19 3.01421 3.68548 0.10701 3.60051 19 - - | |
13405 1.38629 1.38629 1.38629 1.38629 | |
13406 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13407 20 3.18787 2.65814 3.23219 0.16347 20 - - | |
13408 1.38629 1.38629 1.38629 1.38629 | |
13409 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13410 21 0.12970 3.47751 2.86475 3.38854 21 - - | |
13411 1.38629 1.38629 1.38629 1.38629 | |
13412 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13413 22 3.01421 3.68548 0.10701 3.60051 22 - - | |
13414 1.38629 1.38629 1.38629 1.38629 | |
13415 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13416 23 3.01421 3.68548 0.10701 3.60051 23 - - | |
13417 1.38629 1.38629 1.38629 1.38629 | |
13418 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13419 24 3.18787 2.65814 3.23219 0.16347 24 - - | |
13420 1.38629 1.38629 1.38629 1.38629 | |
13421 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13422 25 3.01421 3.68548 0.10701 3.60051 25 - - | |
13423 1.38629 1.38629 1.38629 1.38629 | |
13424 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13425 26 0.12970 3.47751 2.86475 3.38854 26 - - | |
13426 1.38629 1.38629 1.38629 1.38629 | |
13427 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13428 27 0.12970 3.47751 2.86475 3.38854 27 - - | |
13429 1.38629 1.38629 1.38629 1.38629 | |
13430 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13431 28 3.54478 0.11764 3.58937 2.90961 28 - - | |
13432 1.38629 1.38629 1.38629 1.38629 | |
13433 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13434 29 3.54478 0.11764 3.58937 2.90961 29 - - | |
13435 1.38629 1.38629 1.38629 1.38629 | |
13436 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13437 30 3.18787 2.65814 3.23219 0.16347 30 - - | |
13438 1.38629 1.38629 1.38629 1.38629 | |
13439 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13440 31 3.01421 3.68548 0.10701 3.60051 31 - - | |
13441 1.38629 1.38629 1.38629 1.38629 | |
13442 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13443 32 3.54478 0.11764 3.58937 2.90961 32 - - | |
13444 1.38629 1.38629 1.38629 1.38629 | |
13445 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13446 33 2.50860 3.43763 0.16147 3.33578 33 - - | |
13447 1.38629 1.38629 1.38629 1.38629 | |
13448 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13449 34 3.01421 3.68548 0.10701 3.60051 34 - - | |
13450 1.38629 1.38629 1.38629 1.38629 | |
13451 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13452 35 0.12970 3.47751 2.86475 3.38854 35 - - | |
13453 1.38629 1.38629 1.38629 1.38629 | |
13454 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13455 36 0.23093 3.00620 2.64834 2.45388 36 - - | |
13456 1.38629 1.38629 1.38629 1.38629 | |
13457 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13458 37 3.01421 3.68548 0.10701 3.60051 37 - - | |
13459 1.38629 1.38629 1.38629 1.38629 | |
13460 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13461 38 3.01421 3.68548 0.10701 3.60051 38 - - | |
13462 1.38629 1.38629 1.38629 1.38629 | |
13463 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13464 39 0.12970 3.47751 2.86475 3.38854 39 - - | |
13465 1.38629 1.38629 1.38629 1.38629 | |
13466 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13467 40 3.18787 2.65814 3.23219 0.16347 40 - - | |
13468 1.38629 1.38629 1.38629 1.38629 | |
13469 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13470 41 3.54478 0.11764 3.58937 2.90961 41 - - | |
13471 1.38629 1.38629 1.38629 1.38629 | |
13472 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13473 42 0.12970 3.47751 2.86475 3.38854 42 - - | |
13474 1.38629 1.38629 1.38629 1.38629 | |
13475 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13476 43 2.81519 2.59339 3.07078 0.19973 43 - - | |
13477 1.38629 1.38629 1.38629 1.38629 | |
13478 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13479 44 3.18787 2.65814 3.23219 0.16347 44 - - | |
13480 1.38629 1.38629 1.38629 1.38629 | |
13481 0.03483 4.06781 4.06781 1.46634 0.26236 1.09861 0.40547 | |
13482 45 2.10397 0.41821 2.56367 1.94643 45 - - | |
13483 1.38629 1.38629 1.38629 1.38629 | |
13484 0.01757 4.05055 * 1.46634 0.26236 0.00000 * | |
13485 // | |
13486 HMMER3/b [3.0 | March 2010] | |
13487 NAME 1_SSU_Alveolata_1_SSU_end_two_long | |
13488 LENG 45 | |
13489 ALPH DNA | |
13490 RF no | |
13491 CS no | |
13492 MAP yes | |
13493 DATE Sat Jan 28 01:43:11 2012 | |
13494 NSEQ 7 | |
13495 EFFN 3.373535 | |
13496 CKSUM 347251863 | |
13497 STATS LOCAL MSV -7.4282 0.71933 | |
13498 STATS LOCAL VITERBI -7.6473 0.71933 | |
13499 STATS LOCAL FORWARD -4.1966 0.71933 | |
13500 HMM A C G T | |
13501 m->m m->i m->d i->m i->i d->m d->d | |
13502 COMPO 1.33048 1.59392 1.30706 1.33977 | |
13503 1.38629 1.38629 1.38629 1.38629 | |
13504 0.03654 4.02061 4.02061 1.46634 0.26236 0.00000 * | |
13505 1 0.13978 3.39641 2.81240 3.29960 1 - - | |
13506 1.38629 1.38629 1.38629 1.38629 | |
13507 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13508 2 2.95876 3.60411 0.11539 3.51048 2 - - | |
13509 1.38629 1.38629 1.38629 1.38629 | |
13510 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13511 3 3.10493 2.60552 3.15246 0.17607 3 - - | |
13512 1.38629 1.38629 1.38629 1.38629 | |
13513 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13514 4 3.45170 0.12801 3.50037 2.84251 4 - - | |
13515 1.38629 1.38629 1.38629 1.38629 | |
13516 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13517 5 2.95876 3.60411 0.11539 3.51048 5 - - | |
13518 1.38629 1.38629 1.38629 1.38629 | |
13519 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13520 6 3.10493 2.60552 3.15246 0.17607 6 - - | |
13521 1.38629 1.38629 1.38629 1.38629 | |
13522 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13523 7 0.13978 3.39641 2.81240 3.29960 7 - - | |
13524 1.38629 1.38629 1.38629 1.38629 | |
13525 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13526 8 0.13978 3.39641 2.81240 3.29960 8 - - | |
13527 1.38629 1.38629 1.38629 1.38629 | |
13528 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13529 9 3.45170 0.12801 3.50037 2.84251 9 - - | |
13530 1.38629 1.38629 1.38629 1.38629 | |
13531 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13532 10 0.13978 3.39641 2.81240 3.29960 10 - - | |
13533 1.38629 1.38629 1.38629 1.38629 | |
13534 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13535 11 2.43739 1.12083 2.50826 0.68281 11 - - | |
13536 1.38629 1.38629 1.38629 1.38629 | |
13537 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13538 12 2.95876 3.60411 0.11539 3.51048 12 - - | |
13539 1.38629 1.38629 1.38629 1.38629 | |
13540 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13541 13 2.95876 3.60411 0.11539 3.51048 13 - - | |
13542 1.38629 1.38629 1.38629 1.38629 | |
13543 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13544 14 3.10493 2.60552 3.15246 0.17607 14 - - | |
13545 1.38629 1.38629 1.38629 1.38629 | |
13546 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13547 15 0.13978 3.39641 2.81240 3.29960 15 - - | |
13548 1.38629 1.38629 1.38629 1.38629 | |
13549 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13550 16 3.10493 2.60552 3.15246 0.17607 16 - - | |
13551 1.38629 1.38629 1.38629 1.38629 | |
13552 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13553 17 3.45170 0.12801 3.50037 2.84251 17 - - | |
13554 1.38629 1.38629 1.38629 1.38629 | |
13555 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13556 18 3.10493 2.60552 3.15246 0.17607 18 - - | |
13557 1.38629 1.38629 1.38629 1.38629 | |
13558 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13559 19 2.95876 3.60411 0.11539 3.51048 19 - - | |
13560 1.38629 1.38629 1.38629 1.38629 | |
13561 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13562 20 3.10493 2.60552 3.15246 0.17607 20 - - | |
13563 1.38629 1.38629 1.38629 1.38629 | |
13564 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13565 21 0.13978 3.39641 2.81240 3.29960 21 - - | |
13566 1.38629 1.38629 1.38629 1.38629 | |
13567 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13568 22 2.95876 3.60411 0.11539 3.51048 22 - - | |
13569 1.38629 1.38629 1.38629 1.38629 | |
13570 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13571 23 2.95876 3.60411 0.11539 3.51048 23 - - | |
13572 1.38629 1.38629 1.38629 1.38629 | |
13573 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13574 24 3.10493 2.60552 3.15246 0.17607 24 - - | |
13575 1.38629 1.38629 1.38629 1.38629 | |
13576 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13577 25 2.95876 3.60411 0.11539 3.51048 25 - - | |
13578 1.38629 1.38629 1.38629 1.38629 | |
13579 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13580 26 0.13978 3.39641 2.81240 3.29960 26 - - | |
13581 1.38629 1.38629 1.38629 1.38629 | |
13582 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13583 27 0.13978 3.39641 2.81240 3.29960 27 - - | |
13584 1.38629 1.38629 1.38629 1.38629 | |
13585 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13586 28 3.45170 0.12801 3.50037 2.84251 28 - - | |
13587 1.38629 1.38629 1.38629 1.38629 | |
13588 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13589 29 3.45170 0.12801 3.50037 2.84251 29 - - | |
13590 1.38629 1.38629 1.38629 1.38629 | |
13591 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13592 30 3.10493 2.60552 3.15246 0.17607 30 - - | |
13593 1.38629 1.38629 1.38629 1.38629 | |
13594 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13595 31 2.95876 3.60411 0.11539 3.51048 31 - - | |
13596 1.38629 1.38629 1.38629 1.38629 | |
13597 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13598 32 3.45170 0.12801 3.50037 2.84251 32 - - | |
13599 1.38629 1.38629 1.38629 1.38629 | |
13600 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13601 33 0.13978 3.39641 2.81240 3.29960 33 - - | |
13602 1.38629 1.38629 1.38629 1.38629 | |
13603 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13604 34 2.95876 3.60411 0.11539 3.51048 34 - - | |
13605 1.38629 1.38629 1.38629 1.38629 | |
13606 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13607 35 0.13978 3.39641 2.81240 3.29960 35 - - | |
13608 1.38629 1.38629 1.38629 1.38629 | |
13609 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13610 36 3.10493 2.60552 3.15246 0.17607 36 - - | |
13611 1.38629 1.38629 1.38629 1.38629 | |
13612 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13613 37 2.95876 3.60411 0.11539 3.51048 37 - - | |
13614 1.38629 1.38629 1.38629 1.38629 | |
13615 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13616 38 2.95876 3.60411 0.11539 3.51048 38 - - | |
13617 1.38629 1.38629 1.38629 1.38629 | |
13618 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13619 39 0.13978 3.39641 2.81240 3.29960 39 - - | |
13620 1.38629 1.38629 1.38629 1.38629 | |
13621 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13622 40 3.10493 2.60552 3.15246 0.17607 40 - - | |
13623 1.38629 1.38629 1.38629 1.38629 | |
13624 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13625 41 3.45170 0.12801 3.50037 2.84251 41 - - | |
13626 1.38629 1.38629 1.38629 1.38629 | |
13627 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13628 42 0.13978 3.39641 2.81240 3.29960 42 - - | |
13629 1.38629 1.38629 1.38629 1.38629 | |
13630 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13631 43 3.10493 2.60552 3.15246 0.17607 43 - - | |
13632 1.38629 1.38629 1.38629 1.38629 | |
13633 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13634 44 3.10493 2.60552 3.15246 0.17607 44 - - | |
13635 1.38629 1.38629 1.38629 1.38629 | |
13636 0.03654 4.02061 4.02061 1.46634 0.26236 1.09861 0.40547 | |
13637 45 3.45170 0.12801 3.50037 2.84251 45 - - | |
13638 1.38629 1.38629 1.38629 1.38629 | |
13639 0.01844 4.00251 * 1.46634 0.26236 0.00000 * | |
13640 // |