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comparison ITSx_db/HMMs/T.hmm @ 0:f82c70f54bd7 draft

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author okorol
date Tue, 24 Mar 2015 12:02:48 -0400
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-1:000000000000 0:f82c70f54bd7
1 HMMER3/b [3.0 | March 2010]
2 NAME 3_End_Tracheophyta_58S_end_eight_long
3 LENG 45
4 ALPH DNA
5 RF no
6 CS no
7 MAP yes
8 DATE Sat Feb 18 00:57:06 2012
9 NSEQ 662
10 EFFN 4.649132
11 CKSUM 878970887
12 STATS LOCAL MSV -6.9557 0.71932
13 STATS LOCAL VITERBI -7.5350 0.71932
14 STATS LOCAL FORWARD -3.7755 0.71932
15 HMM A C G T
16 m->m m->i m->d i->m i->i d->m d->d
17 COMPO 1.86570 1.07040 1.08935 1.79633
18 1.38629 1.38629 1.38629 1.38629
19 0.02964 4.22671 4.22671 1.46634 0.26236 0.00000 *
20 1 3.17620 3.92530 0.08600 3.86688 1 - -
21 1.38629 1.38629 1.38629 1.38629
22 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
23 2 3.82361 0.09186 3.85519 3.10671 2 - -
24 1.38629 1.38629 1.38629 1.38629
25 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
26 3 3.82361 0.09186 3.85519 3.10671 3 - -
27 1.38629 1.38629 1.38629 1.38629
28 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
29 4 3.57901 0.14044 3.62229 2.57183 4 - -
30 1.38629 1.38629 1.38629 1.38629
31 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
32 5 1.93587 1.39029 0.83718 1.75004 5 - -
33 1.38629 1.38629 1.38629 1.38629
34 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
35 6 0.10359 3.72520 3.02434 3.66086 6 - -
36 1.38629 1.38629 1.38629 1.38629
37 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
38 7 0.19844 3.34834 2.27973 3.15742 7 - -
39 1.38629 1.38629 1.38629 1.38629
40 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
41 8 3.17620 3.92530 0.08600 3.86688 8 - -
42 1.38629 1.38629 1.38629 1.38629
43 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
44 9 3.82361 0.09186 3.85519 3.10671 9 - -
45 1.38629 1.38629 1.38629 1.38629
46 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
47 10 3.77465 0.10089 3.80859 2.97902 10 - -
48 1.38629 1.38629 1.38629 1.38629
49 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
50 11 0.84316 2.18097 1.68775 1.30274 11 - -
51 1.38629 1.38629 1.38629 1.38629
52 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
53 12 3.24031 2.25577 3.28501 0.20014 12 - -
54 1.38629 1.38629 1.38629 1.38629
55 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
56 13 2.81050 1.42383 2.87304 0.44238 13 - -
57 1.38629 1.38629 1.38629 1.38629
58 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
59 14 1.22032 1.28525 1.91165 1.27137 14 - -
60 1.38629 1.38629 1.38629 1.38629
61 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
62 15 3.17620 3.92530 0.08600 3.86688 15 - -
63 1.38629 1.38629 1.38629 1.38629
64 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
65 16 3.17620 3.92530 0.08600 3.86688 16 - -
66 1.38629 1.38629 1.38629 1.38629
67 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
68 17 3.55653 0.14545 3.60081 2.53166 17 - -
69 1.38629 1.38629 1.38629 1.38629
70 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
71 18 3.35052 0.19783 3.40305 2.19688 18 - -
72 1.38629 1.38629 1.38629 1.38629
73 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
74 19 2.73063 3.76185 0.12042 3.68745 19 - -
75 1.38629 1.38629 1.38629 1.38629
76 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
77 20 0.10359 3.72520 3.02434 3.66086 20 - -
78 1.38629 1.38629 1.38629 1.38629
79 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
80 21 2.82567 3.80301 0.11149 3.73280 21 - -
81 1.38629 1.38629 1.38629 1.38629
82 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
83 22 3.17620 3.92530 0.08600 3.86688 22 - -
84 1.38629 1.38629 1.38629 1.38629
85 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
86 23 3.17620 3.92530 0.08600 3.86688 23 - -
87 1.38629 1.38629 1.38629 1.38629
88 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
89 24 3.82361 0.09186 3.85519 3.10671 24 - -
90 1.38629 1.38629 1.38629 1.38629
91 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
92 25 0.10359 3.72520 3.02434 3.66086 25 - -
93 1.38629 1.38629 1.38629 1.38629
94 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
95 26 3.76501 0.10270 3.79943 2.95555 26 - -
96 1.38629 1.38629 1.38629 1.38629
97 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
98 27 3.06878 3.83900 0.09883 3.64534 27 - -
99 1.38629 1.38629 1.38629 1.38629
100 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
101 28 2.75612 1.31587 2.82056 0.49651 28 - -
102 1.38629 1.38629 1.38629 1.38629
103 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
104 29 3.70999 0.11326 3.74712 2.82995 29 - -
105 1.38629 1.38629 1.38629 1.38629
106 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
107 30 3.45156 2.82621 3.48548 0.12962 30 - -
108 1.38629 1.38629 1.38629 1.38629
109 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
110 31 3.17620 3.92530 0.08600 3.86688 31 - -
111 1.38629 1.38629 1.38629 1.38629
112 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
113 32 3.82361 0.09186 3.85519 3.10671 32 - -
114 1.38629 1.38629 1.38629 1.38629
115 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
116 33 3.82361 0.09186 3.85519 3.10671 33 - -
117 1.38629 1.38629 1.38629 1.38629
118 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
119 34 3.45156 2.82621 3.48548 0.12962 34 - -
120 1.38629 1.38629 1.38629 1.38629
121 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
122 35 3.17620 3.92530 0.08600 3.86688 35 - -
123 1.38629 1.38629 1.38629 1.38629
124 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
125 36 3.14070 3.84248 0.09662 3.59684 36 - -
126 1.38629 1.38629 1.38629 1.38629
127 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
128 37 3.17620 3.92530 0.08600 3.86688 37 - -
129 1.38629 1.38629 1.38629 1.38629
130 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
131 38 2.65366 0.70233 2.72331 0.99826 38 - -
132 1.38629 1.38629 1.38629 1.38629
133 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
134 39 3.17620 3.92530 0.08600 3.86688 39 - -
135 1.38629 1.38629 1.38629 1.38629
136 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
137 40 3.45156 2.82621 3.48548 0.12962 40 - -
138 1.38629 1.38629 1.38629 1.38629
139 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
140 41 3.77814 0.10024 3.81192 2.98765 41 - -
141 1.38629 1.38629 1.38629 1.38629
142 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
143 42 0.12107 3.61002 2.98028 3.31865 42 - -
144 1.38629 1.38629 1.38629 1.38629
145 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
146 43 3.76361 0.10296 3.79809 2.95218 43 - -
147 1.38629 1.38629 1.38629 1.38629
148 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
149 44 2.62684 3.71265 0.13142 3.63335 44 - -
150 1.38629 1.38629 1.38629 1.38629
151 0.02964 4.22671 4.22671 1.46634 0.26236 1.09861 0.40547
152 45 3.21513 0.24087 3.27225 1.99521 45 - -
153 1.38629 1.38629 1.38629 1.38629
154 0.01493 4.21200 * 1.46634 0.26236 0.00000 *
155 //
156 HMMER3/b [3.0 | March 2010]
157 NAME 3_End_Tracheophyta_58S_end_eighteen_long
158 LENG 45
159 ALPH DNA
160 RF no
161 CS no
162 MAP yes
163 DATE Sat Feb 18 01:01:50 2012
164 NSEQ 32
165 EFFN 3.222656
166 CKSUM 2873994334
167 STATS LOCAL MSV -8.1370 0.71932
168 STATS LOCAL VITERBI -7.7175 0.71932
169 STATS LOCAL FORWARD -3.4978 0.71932
170 HMM A C G T
171 m->m m->i m->d i->m i->i d->m d->d
172 COMPO 1.72186 1.05600 1.08934 1.98789
173 1.38629 1.38629 1.38629 1.38629
174 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 *
175 1 2.92467 3.55461 0.12085 3.45586 1 - -
176 1.38629 1.38629 1.38629 1.38629
177 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
178 2 3.39555 0.13478 3.44658 2.80157 2 - -
179 1.38629 1.38629 1.38629 1.38629
180 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
181 3 3.39555 0.13478 3.44658 2.80157 3 - -
182 1.38629 1.38629 1.38629 1.38629
183 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
184 4 3.39555 0.13478 3.44658 2.80157 4 - -
185 1.38629 1.38629 1.38629 1.38629
186 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
187 5 2.92467 3.55461 0.12085 3.45586 5 - -
188 1.38629 1.38629 1.38629 1.38629
189 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
190 6 0.14627 3.34770 2.78072 3.24630 6 - -
191 1.38629 1.38629 1.38629 1.38629
192 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
193 7 2.92467 3.55461 0.12085 3.45586 7 - -
194 1.38629 1.38629 1.38629 1.38629
195 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
196 8 2.92467 3.55461 0.12085 3.45586 8 - -
197 1.38629 1.38629 1.38629 1.38629
198 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
199 9 3.39555 0.13478 3.44658 2.80157 9 - -
200 1.38629 1.38629 1.38629 1.38629
201 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
202 10 3.39555 0.13478 3.44658 2.80157 10 - -
203 1.38629 1.38629 1.38629 1.38629
204 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
205 11 0.14627 3.34770 2.78072 3.24630 11 - -
206 1.38629 1.38629 1.38629 1.38629
207 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
208 12 3.39555 0.13478 3.44658 2.80157 12 - -
209 1.38629 1.38629 1.38629 1.38629
210 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
211 13 3.05586 2.57429 3.10526 0.18405 13 - -
212 1.38629 1.38629 1.38629 1.38629
213 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
214 14 0.14627 3.34770 2.78072 3.24630 14 - -
215 1.38629 1.38629 1.38629 1.38629
216 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
217 15 2.92467 3.55461 0.12085 3.45586 15 - -
218 1.38629 1.38629 1.38629 1.38629
219 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
220 16 2.92467 3.55461 0.12085 3.45586 16 - -
221 1.38629 1.38629 1.38629 1.38629
222 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
223 17 3.02608 0.23379 3.08751 2.16846 17 - -
224 1.38629 1.38629 1.38629 1.38629
225 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
226 18 2.40395 1.10046 2.47543 0.70766 18 - -
227 1.38629 1.38629 1.38629 1.38629
228 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
229 19 2.92467 3.55461 0.12085 3.45586 19 - -
230 1.38629 1.38629 1.38629 1.38629
231 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
232 20 0.14627 3.34770 2.78072 3.24630 20 - -
233 1.38629 1.38629 1.38629 1.38629
234 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
235 21 2.92467 3.55461 0.12085 3.45586 21 - -
236 1.38629 1.38629 1.38629 1.38629
237 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
238 22 2.92467 3.55461 0.12085 3.45586 22 - -
239 1.38629 1.38629 1.38629 1.38629
240 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
241 23 2.92467 3.55461 0.12085 3.45586 23 - -
242 1.38629 1.38629 1.38629 1.38629
243 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
244 24 3.39555 0.13478 3.44658 2.80157 24 - -
245 1.38629 1.38629 1.38629 1.38629
246 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
247 25 0.14627 3.34770 2.78072 3.24630 25 - -
248 1.38629 1.38629 1.38629 1.38629
249 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
250 26 3.39555 0.13478 3.44658 2.80157 26 - -
251 1.38629 1.38629 1.38629 1.38629
252 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
253 27 2.92467 3.55461 0.12085 3.45586 27 - -
254 1.38629 1.38629 1.38629 1.38629
255 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
256 28 2.92668 0.27091 2.99060 2.01381 28 - -
257 1.38629 1.38629 1.38629 1.38629
258 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
259 29 3.39555 0.13478 3.44658 2.80157 29 - -
260 1.38629 1.38629 1.38629 1.38629
261 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
262 30 3.05586 2.57429 3.10526 0.18405 30 - -
263 1.38629 1.38629 1.38629 1.38629
264 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
265 31 2.92467 3.55461 0.12085 3.45586 31 - -
266 1.38629 1.38629 1.38629 1.38629
267 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
268 32 3.39555 0.13478 3.44658 2.80157 32 - -
269 1.38629 1.38629 1.38629 1.38629
270 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
271 33 3.39555 0.13478 3.44658 2.80157 33 - -
272 1.38629 1.38629 1.38629 1.38629
273 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
274 34 3.05586 2.57429 3.10526 0.18405 34 - -
275 1.38629 1.38629 1.38629 1.38629
276 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
277 35 2.92467 3.55461 0.12085 3.45586 35 - -
278 1.38629 1.38629 1.38629 1.38629
279 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
280 36 2.92467 3.55461 0.12085 3.45586 36 - -
281 1.38629 1.38629 1.38629 1.38629
282 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
283 37 2.92467 3.55461 0.12085 3.45586 37 - -
284 1.38629 1.38629 1.38629 1.38629
285 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
286 38 3.39555 0.13478 3.44658 2.80157 38 - -
287 1.38629 1.38629 1.38629 1.38629
288 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
289 39 2.92467 3.55461 0.12085 3.45586 39 - -
290 1.38629 1.38629 1.38629 1.38629
291 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
292 40 3.05586 2.57429 3.10526 0.18405 40 - -
293 1.38629 1.38629 1.38629 1.38629
294 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
295 41 3.39555 0.13478 3.44658 2.80157 41 - -
296 1.38629 1.38629 1.38629 1.38629
297 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
298 42 0.14627 3.34770 2.78072 3.24630 42 - -
299 1.38629 1.38629 1.38629 1.38629
300 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
301 43 3.39555 0.13478 3.44658 2.80157 43 - -
302 1.38629 1.38629 1.38629 1.38629
303 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
304 44 0.14627 3.34770 2.78072 3.24630 44 - -
305 1.38629 1.38629 1.38629 1.38629
306 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547
307 45 3.39555 0.13478 3.44658 2.80157 45 - -
308 1.38629 1.38629 1.38629 1.38629
309 0.01897 3.97456 * 1.46634 0.26236 0.00000 *
310 //
311 HMMER3/b [3.0 | March 2010]
312 NAME 3_End_Tracheophyta_58S_end_eleven_long
313 LENG 45
314 ALPH DNA
315 RF no
316 CS no
317 MAP yes
318 DATE Sat Feb 18 00:57:45 2012
319 NSEQ 17
320 EFFN 3.141846
321 CKSUM 144042220
322 STATS LOCAL MSV -8.0334 0.71931
323 STATS LOCAL VITERBI -7.6576 0.71931
324 STATS LOCAL FORWARD -3.7404 0.71931
325 HMM A C G T
326 m->m m->i m->d i->m i->i d->m d->d
327 COMPO 1.93155 1.06659 1.09552 1.73426
328 1.38629 1.38629 1.38629 1.38629
329 0.03816 3.97816 3.97816 1.46634 0.26236 0.00000 *
330 1 2.90543 3.52685 0.12405 3.42529 1 - -
331 1.38629 1.38629 1.38629 1.38629
332 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
333 2 3.36422 0.13874 3.41654 2.77857 2 - -
334 1.38629 1.38629 1.38629 1.38629
335 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
336 3 3.36422 0.13874 3.41654 2.77857 3 - -
337 1.38629 1.38629 1.38629 1.38629
338 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
339 4 3.36422 0.13874 3.41654 2.77857 4 - -
340 1.38629 1.38629 1.38629 1.38629
341 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
342 5 2.90543 3.52685 0.12405 3.42529 5 - -
343 1.38629 1.38629 1.38629 1.38629
344 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
345 6 0.15004 3.32058 2.76298 3.21666 6 - -
346 1.38629 1.38629 1.38629 1.38629
347 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
348 7 3.36422 0.13874 3.41654 2.77857 7 - -
349 1.38629 1.38629 1.38629 1.38629
350 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
351 8 2.90543 3.52685 0.12405 3.42529 8 - -
352 1.38629 1.38629 1.38629 1.38629
353 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
354 9 3.36422 0.13874 3.41654 2.77857 9 - -
355 1.38629 1.38629 1.38629 1.38629
356 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
357 10 3.36422 0.13874 3.41654 2.77857 10 - -
358 1.38629 1.38629 1.38629 1.38629
359 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
360 11 0.15004 3.32058 2.76298 3.21666 11 - -
361 1.38629 1.38629 1.38629 1.38629
362 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
363 12 3.02876 2.55699 3.07919 0.18863 12 - -
364 1.38629 1.38629 1.38629 1.38629
365 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
366 13 3.02876 2.55699 3.07919 0.18863 13 - -
367 1.38629 1.38629 1.38629 1.38629
368 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
369 14 3.36422 0.13874 3.41654 2.77857 14 - -
370 1.38629 1.38629 1.38629 1.38629
371 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
372 15 2.90543 3.52685 0.12405 3.42529 15 - -
373 1.38629 1.38629 1.38629 1.38629
374 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
375 16 2.90543 3.52685 0.12405 3.42529 16 - -
376 1.38629 1.38629 1.38629 1.38629
377 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
378 17 2.75581 0.34631 2.82349 1.77343 17 - -
379 1.38629 1.38629 1.38629 1.38629
380 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
381 18 3.36422 0.13874 3.41654 2.77857 18 - -
382 1.38629 1.38629 1.38629 1.38629
383 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
384 19 2.90543 3.52685 0.12405 3.42529 19 - -
385 1.38629 1.38629 1.38629 1.38629
386 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
387 20 0.15004 3.32058 2.76298 3.21666 20 - -
388 1.38629 1.38629 1.38629 1.38629
389 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
390 21 2.90543 3.52685 0.12405 3.42529 21 - -
391 1.38629 1.38629 1.38629 1.38629
392 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
393 22 2.90543 3.52685 0.12405 3.42529 22 - -
394 1.38629 1.38629 1.38629 1.38629
395 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
396 23 2.90543 3.52685 0.12405 3.42529 23 - -
397 1.38629 1.38629 1.38629 1.38629
398 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
399 24 3.36422 0.13874 3.41654 2.77857 24 - -
400 1.38629 1.38629 1.38629 1.38629
401 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
402 25 0.15004 3.32058 2.76298 3.21666 25 - -
403 1.38629 1.38629 1.38629 1.38629
404 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
405 26 3.36422 0.13874 3.41654 2.77857 26 - -
406 1.38629 1.38629 1.38629 1.38629
407 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
408 27 2.90543 3.52685 0.12405 3.42529 27 - -
409 1.38629 1.38629 1.38629 1.38629
410 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
411 28 3.02876 2.55699 3.07919 0.18863 28 - -
412 1.38629 1.38629 1.38629 1.38629
413 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
414 29 3.36422 0.13874 3.41654 2.77857 29 - -
415 1.38629 1.38629 1.38629 1.38629
416 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
417 30 3.02876 2.55699 3.07919 0.18863 30 - -
418 1.38629 1.38629 1.38629 1.38629
419 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
420 31 2.90543 3.52685 0.12405 3.42529 31 - -
421 1.38629 1.38629 1.38629 1.38629
422 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
423 32 3.36422 0.13874 3.41654 2.77857 32 - -
424 1.38629 1.38629 1.38629 1.38629
425 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
426 33 3.36422 0.13874 3.41654 2.77857 33 - -
427 1.38629 1.38629 1.38629 1.38629
428 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
429 34 3.02876 2.55699 3.07919 0.18863 34 - -
430 1.38629 1.38629 1.38629 1.38629
431 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
432 35 2.90543 3.52685 0.12405 3.42529 35 - -
433 1.38629 1.38629 1.38629 1.38629
434 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
435 36 2.90543 3.52685 0.12405 3.42529 36 - -
436 1.38629 1.38629 1.38629 1.38629
437 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
438 37 2.90543 3.52685 0.12405 3.42529 37 - -
439 1.38629 1.38629 1.38629 1.38629
440 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
441 38 3.02876 2.55699 3.07919 0.18863 38 - -
442 1.38629 1.38629 1.38629 1.38629
443 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
444 39 2.90543 3.52685 0.12405 3.42529 39 - -
445 1.38629 1.38629 1.38629 1.38629
446 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
447 40 3.02876 2.55699 3.07919 0.18863 40 - -
448 1.38629 1.38629 1.38629 1.38629
449 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
450 41 3.36422 0.13874 3.41654 2.77857 41 - -
451 1.38629 1.38629 1.38629 1.38629
452 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
453 42 0.15004 3.32058 2.76298 3.21666 42 - -
454 1.38629 1.38629 1.38629 1.38629
455 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
456 43 3.36422 0.13874 3.41654 2.77857 43 - -
457 1.38629 1.38629 1.38629 1.38629
458 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
459 44 2.90543 3.52685 0.12405 3.42529 44 - -
460 1.38629 1.38629 1.38629 1.38629
461 0.03816 3.97816 3.97816 1.46634 0.26236 1.09861 0.40547
462 45 3.36422 0.13874 3.41654 2.77857 45 - -
463 1.38629 1.38629 1.38629 1.38629
464 0.01926 3.95926 * 1.46634 0.26236 0.00000 *
465 //
466 HMMER3/b [3.0 | March 2010]
467 NAME 3_End_Tracheophyta_58S_end_fifteena_long
468 LENG 45
469 ALPH DNA
470 RF no
471 CS no
472 MAP yes
473 DATE Sat Feb 18 00:59:06 2012
474 NSEQ 8
475 EFFN 3.105469
476 CKSUM 803603558
477 STATS LOCAL MSV -8.1846 0.71931
478 STATS LOCAL VITERBI -7.7807 0.71931
479 STATS LOCAL FORWARD -4.0577 0.71931
480 HMM A C G T
481 m->m m->i m->d i->m i->i d->m d->d
482 COMPO 1.55243 1.21735 1.14333 1.75159
483 1.38629 1.38629 1.38629 1.38629
484 0.03843 3.97132 3.97132 1.46634 0.26236 0.00000 *
485 1 2.89652 3.51406 0.12555 3.41122 1 - -
486 1.38629 1.38629 1.38629 1.38629
487 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
488 2 3.34983 0.14060 3.40273 2.76795 2 - -
489 1.38629 1.38629 1.38629 1.38629
490 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
491 3 3.34983 0.14060 3.40273 2.76795 3 - -
492 1.38629 1.38629 1.38629 1.38629
493 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
494 4 3.01638 2.54908 3.06726 0.19077 4 - -
495 1.38629 1.38629 1.38629 1.38629
496 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
497 5 2.89652 3.51406 0.12555 3.41122 5 - -
498 1.38629 1.38629 1.38629 1.38629
499 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
500 6 0.15180 3.30814 2.75481 3.20307 6 - -
501 1.38629 1.38629 1.38629 1.38629
502 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
503 7 0.15180 3.30814 2.75481 3.20307 7 - -
504 1.38629 1.38629 1.38629 1.38629
505 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
506 8 2.89652 3.51406 0.12555 3.41122 8 - -
507 1.38629 1.38629 1.38629 1.38629
508 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
509 9 3.34983 0.14060 3.40273 2.76795 9 - -
510 1.38629 1.38629 1.38629 1.38629
511 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
512 10 3.34983 0.14060 3.40273 2.76795 10 - -
513 1.38629 1.38629 1.38629 1.38629
514 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
515 11 0.15180 3.30814 2.75481 3.20307 11 - -
516 1.38629 1.38629 1.38629 1.38629
517 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
518 12 3.01638 2.54908 3.06726 0.19077 12 - -
519 1.38629 1.38629 1.38629 1.38629
520 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
521 13 3.34983 0.14060 3.40273 2.76795 13 - -
522 1.38629 1.38629 1.38629 1.38629
523 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
524 14 0.15180 3.30814 2.75481 3.20307 14 - -
525 1.38629 1.38629 1.38629 1.38629
526 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
527 15 2.89652 3.51406 0.12555 3.41122 15 - -
528 1.38629 1.38629 1.38629 1.38629
529 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
530 16 2.89652 3.51406 0.12555 3.41122 16 - -
531 1.38629 1.38629 1.38629 1.38629
532 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
533 17 3.34983 0.14060 3.40273 2.76795 17 - -
534 1.38629 1.38629 1.38629 1.38629
535 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
536 18 3.01638 2.54908 3.06726 0.19077 18 - -
537 1.38629 1.38629 1.38629 1.38629
538 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
539 19 2.89652 3.51406 0.12555 3.41122 19 - -
540 1.38629 1.38629 1.38629 1.38629
541 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
542 20 0.15180 3.30814 2.75481 3.20307 20 - -
543 1.38629 1.38629 1.38629 1.38629
544 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
545 21 2.89652 3.51406 0.12555 3.41122 21 - -
546 1.38629 1.38629 1.38629 1.38629
547 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
548 22 2.89652 3.51406 0.12555 3.41122 22 - -
549 1.38629 1.38629 1.38629 1.38629
550 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
551 23 2.89652 3.51406 0.12555 3.41122 23 - -
552 1.38629 1.38629 1.38629 1.38629
553 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
554 24 3.34983 0.14060 3.40273 2.76795 24 - -
555 1.38629 1.38629 1.38629 1.38629
556 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
557 25 0.15180 3.30814 2.75481 3.20307 25 - -
558 1.38629 1.38629 1.38629 1.38629
559 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
560 26 3.34983 0.14060 3.40273 2.76795 26 - -
561 1.38629 1.38629 1.38629 1.38629
562 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
563 27 2.89652 3.51406 0.12555 3.41122 27 - -
564 1.38629 1.38629 1.38629 1.38629
565 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
566 28 3.01638 2.54908 3.06726 0.19077 28 - -
567 1.38629 1.38629 1.38629 1.38629
568 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
569 29 3.34983 0.14060 3.40273 2.76795 29 - -
570 1.38629 1.38629 1.38629 1.38629
571 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
572 30 3.01638 2.54908 3.06726 0.19077 30 - -
573 1.38629 1.38629 1.38629 1.38629
574 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
575 31 2.89652 3.51406 0.12555 3.41122 31 - -
576 1.38629 1.38629 1.38629 1.38629
577 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
578 32 3.34983 0.14060 3.40273 2.76795 32 - -
579 1.38629 1.38629 1.38629 1.38629
580 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
581 33 3.34983 0.14060 3.40273 2.76795 33 - -
582 1.38629 1.38629 1.38629 1.38629
583 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
584 34 3.01638 2.54908 3.06726 0.19077 34 - -
585 1.38629 1.38629 1.38629 1.38629
586 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
587 35 2.89652 3.51406 0.12555 3.41122 35 - -
588 1.38629 1.38629 1.38629 1.38629
589 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
590 36 2.89652 3.51406 0.12555 3.41122 36 - -
591 1.38629 1.38629 1.38629 1.38629
592 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
593 37 2.89652 3.51406 0.12555 3.41122 37 - -
594 1.38629 1.38629 1.38629 1.38629
595 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
596 38 3.34983 0.14060 3.40273 2.76795 38 - -
597 1.38629 1.38629 1.38629 1.38629
598 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
599 39 2.89652 3.51406 0.12555 3.41122 39 - -
600 1.38629 1.38629 1.38629 1.38629
601 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
602 40 3.01638 2.54908 3.06726 0.19077 40 - -
603 1.38629 1.38629 1.38629 1.38629
604 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
605 41 3.34983 0.14060 3.40273 2.76795 41 - -
606 1.38629 1.38629 1.38629 1.38629
607 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
608 42 0.15180 3.30814 2.75481 3.20307 42 - -
609 1.38629 1.38629 1.38629 1.38629
610 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
611 43 0.15180 3.30814 2.75481 3.20307 43 - -
612 1.38629 1.38629 1.38629 1.38629
613 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
614 44 0.15180 3.30814 2.75481 3.20307 44 - -
615 1.38629 1.38629 1.38629 1.38629
616 0.03843 3.97132 3.97132 1.46634 0.26236 1.09861 0.40547
617 45 3.34983 0.14060 3.40273 2.76795 45 - -
618 1.38629 1.38629 1.38629 1.38629
619 0.01940 3.95229 * 1.46634 0.26236 0.00000 *
620 //
621 HMMER3/b [3.0 | March 2010]
622 NAME 3_End_Tracheophyta_58S_end_fifteenb_long
623 LENG 45
624 ALPH DNA
625 RF no
626 CS no
627 MAP yes
628 DATE Sat Feb 18 00:59:15 2012
629 NSEQ 5
630 EFFN 3.393555
631 CKSUM 3509542651
632 STATS LOCAL MSV -7.3147 0.71933
633 STATS LOCAL VITERBI -7.6680 0.71933
634 STATS LOCAL FORWARD -3.7818 0.71933
635 HMM A C G T
636 m->m m->i m->d i->m i->i d->m d->d
637 COMPO 1.81544 1.21795 1.12415 1.53030
638 1.38629 1.38629 1.38629 1.38629
639 0.03641 4.02420 4.02420 1.46634 0.26236 0.00000 *
640 1 2.96311 3.61046 0.11471 3.51750 1 - -
641 1.38629 1.38629 1.38629 1.38629
642 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
643 2 3.45893 0.12717 3.50729 2.84776 2 - -
644 1.38629 1.38629 1.38629 1.38629
645 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
646 3 3.45893 0.12717 3.50729 2.84776 3 - -
647 1.38629 1.38629 1.38629 1.38629
648 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
649 4 3.45893 0.12717 3.50729 2.84776 4 - -
650 1.38629 1.38629 1.38629 1.38629
651 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
652 5 0.13897 3.40269 2.81647 3.30648 5 - -
653 1.38629 1.38629 1.38629 1.38629
654 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
655 6 0.13897 3.40269 2.81647 3.30648 6 - -
656 1.38629 1.38629 1.38629 1.38629
657 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
658 7 0.13897 3.40269 2.81647 3.30648 7 - -
659 1.38629 1.38629 1.38629 1.38629
660 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
661 8 2.96311 3.61046 0.11471 3.51750 8 - -
662 1.38629 1.38629 1.38629 1.38629
663 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
664 9 3.45893 0.12717 3.50729 2.84776 9 - -
665 1.38629 1.38629 1.38629 1.38629
666 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
667 10 3.45893 0.12717 3.50729 2.84776 10 - -
668 1.38629 1.38629 1.38629 1.38629
669 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
670 11 3.11130 2.60957 3.15859 0.17506 11 - -
671 1.38629 1.38629 1.38629 1.38629
672 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
673 12 3.11130 2.60957 3.15859 0.17506 12 - -
674 1.38629 1.38629 1.38629 1.38629
675 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
676 13 2.45725 1.18269 2.52749 0.63863 13 - -
677 1.38629 1.38629 1.38629 1.38629
678 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
679 14 2.10374 0.82094 1.19844 1.99275 14 - -
680 1.38629 1.38629 1.38629 1.38629
681 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
682 15 2.96311 3.61046 0.11471 3.51750 15 - -
683 1.38629 1.38629 1.38629 1.38629
684 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
685 16 2.96311 3.61046 0.11471 3.51750 16 - -
686 1.38629 1.38629 1.38629 1.38629
687 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
688 17 3.45893 0.12717 3.50729 2.84776 17 - -
689 1.38629 1.38629 1.38629 1.38629
690 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
691 18 3.45893 0.12717 3.50729 2.84776 18 - -
692 1.38629 1.38629 1.38629 1.38629
693 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
694 19 2.96311 3.61046 0.11471 3.51750 19 - -
695 1.38629 1.38629 1.38629 1.38629
696 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
697 20 0.13897 3.40269 2.81647 3.30648 20 - -
698 1.38629 1.38629 1.38629 1.38629
699 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
700 21 2.96311 3.61046 0.11471 3.51750 21 - -
701 1.38629 1.38629 1.38629 1.38629
702 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
703 22 2.96311 3.61046 0.11471 3.51750 22 - -
704 1.38629 1.38629 1.38629 1.38629
705 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
706 23 2.96311 3.61046 0.11471 3.51750 23 - -
707 1.38629 1.38629 1.38629 1.38629
708 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
709 24 3.45893 0.12717 3.50729 2.84776 24 - -
710 1.38629 1.38629 1.38629 1.38629
711 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
712 25 0.13897 3.40269 2.81647 3.30648 25 - -
713 1.38629 1.38629 1.38629 1.38629
714 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
715 26 3.45893 0.12717 3.50729 2.84776 26 - -
716 1.38629 1.38629 1.38629 1.38629
717 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
718 27 2.96311 3.61046 0.11471 3.51750 27 - -
719 1.38629 1.38629 1.38629 1.38629
720 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
721 28 3.11130 2.60957 3.15859 0.17506 28 - -
722 1.38629 1.38629 1.38629 1.38629
723 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
724 29 3.45893 0.12717 3.50729 2.84776 29 - -
725 1.38629 1.38629 1.38629 1.38629
726 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
727 30 3.11130 2.60957 3.15859 0.17506 30 - -
728 1.38629 1.38629 1.38629 1.38629
729 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
730 31 2.96311 3.61046 0.11471 3.51750 31 - -
731 1.38629 1.38629 1.38629 1.38629
732 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
733 32 3.45893 0.12717 3.50729 2.84776 32 - -
734 1.38629 1.38629 1.38629 1.38629
735 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
736 33 3.45893 0.12717 3.50729 2.84776 33 - -
737 1.38629 1.38629 1.38629 1.38629
738 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
739 34 3.11130 2.60957 3.15859 0.17506 34 - -
740 1.38629 1.38629 1.38629 1.38629
741 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
742 35 2.96311 3.61046 0.11471 3.51750 35 - -
743 1.38629 1.38629 1.38629 1.38629
744 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
745 36 2.96311 3.61046 0.11471 3.51750 36 - -
746 1.38629 1.38629 1.38629 1.38629
747 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
748 37 2.96311 3.61046 0.11471 3.51750 37 - -
749 1.38629 1.38629 1.38629 1.38629
750 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
751 38 3.11130 2.60957 3.15859 0.17506 38 - -
752 1.38629 1.38629 1.38629 1.38629
753 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
754 39 2.96311 3.61046 0.11471 3.51750 39 - -
755 1.38629 1.38629 1.38629 1.38629
756 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
757 40 3.11130 2.60957 3.15859 0.17506 40 - -
758 1.38629 1.38629 1.38629 1.38629
759 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
760 41 3.45893 0.12717 3.50729 2.84776 41 - -
761 1.38629 1.38629 1.38629 1.38629
762 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
763 42 0.13897 3.40269 2.81647 3.30648 42 - -
764 1.38629 1.38629 1.38629 1.38629
765 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
766 43 3.11130 2.60957 3.15859 0.17506 43 - -
767 1.38629 1.38629 1.38629 1.38629
768 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
769 44 2.96311 3.61046 0.11471 3.51750 44 - -
770 1.38629 1.38629 1.38629 1.38629
771 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547
772 45 3.11130 2.60957 3.15859 0.17506 45 - -
773 1.38629 1.38629 1.38629 1.38629
774 0.01837 4.00616 * 1.46634 0.26236 0.00000 *
775 //
776 HMMER3/b [3.0 | March 2010]
777 NAME 3_End_Tracheophyta_58S_end_fifteenc_long
778 LENG 45
779 ALPH DNA
780 RF no
781 CS no
782 MAP yes
783 DATE Sat Feb 18 00:59:22 2012
784 NSEQ 3
785 EFFN 3.000000
786 CKSUM 101589114
787 STATS LOCAL MSV -8.1735 0.71999
788 STATS LOCAL VITERBI -7.8984 0.71999
789 STATS LOCAL FORWARD -4.0579 0.71999
790 HMM A C G T
791 m->m m->i m->d i->m i->i d->m d->d
792 COMPO 1.81067 1.32828 1.09424 1.44083
793 1.38629 1.38629 1.38629 1.38629
794 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
795 1 2.86982 3.47591 0.13017 3.36931 1 - -
796 1.38629 1.38629 1.38629 1.38629
797 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
798 2 3.30705 0.14631 3.36166 2.73626 2 - -
799 1.38629 1.38629 1.38629 1.38629
800 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
801 3 3.30705 0.14631 3.36166 2.73626 3 - -
802 1.38629 1.38629 1.38629 1.38629
803 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
804 4 2.97980 2.52563 3.03204 0.19727 4 - -
805 1.38629 1.38629 1.38629 1.38629
806 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
807 5 2.86982 3.47591 0.13017 3.36931 5 - -
808 1.38629 1.38629 1.38629 1.38629
809 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
810 6 0.15719 3.27118 2.73043 3.16274 6 - -
811 1.38629 1.38629 1.38629 1.38629
812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
813 7 0.15719 3.27118 2.73043 3.16274 7 - -
814 1.38629 1.38629 1.38629 1.38629
815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
816 8 2.86982 3.47591 0.13017 3.36931 8 - -
817 1.38629 1.38629 1.38629 1.38629
818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
819 9 3.30705 0.14631 3.36166 2.73626 9 - -
820 1.38629 1.38629 1.38629 1.38629
821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
822 10 2.97980 2.52563 3.03204 0.19727 10 - -
823 1.38629 1.38629 1.38629 1.38629
824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
825 11 0.15719 3.27118 2.73043 3.16274 11 - -
826 1.38629 1.38629 1.38629 1.38629
827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
828 12 2.97980 2.52563 3.03204 0.19727 12 - -
829 1.38629 1.38629 1.38629 1.38629
830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
831 13 2.97980 2.52563 3.03204 0.19727 13 - -
832 1.38629 1.38629 1.38629 1.38629
833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
834 14 0.15719 3.27118 2.73043 3.16274 14 - -
835 1.38629 1.38629 1.38629 1.38629
836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
837 15 2.86982 3.47591 0.13017 3.36931 15 - -
838 1.38629 1.38629 1.38629 1.38629
839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
840 16 2.86982 3.47591 0.13017 3.36931 16 - -
841 1.38629 1.38629 1.38629 1.38629
842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
843 17 2.97980 2.52563 3.03204 0.19727 17 - -
844 1.38629 1.38629 1.38629 1.38629
845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
846 18 2.97980 2.52563 3.03204 0.19727 18 - -
847 1.38629 1.38629 1.38629 1.38629
848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
849 19 2.86982 3.47591 0.13017 3.36931 19 - -
850 1.38629 1.38629 1.38629 1.38629
851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
852 20 0.15719 3.27118 2.73043 3.16274 20 - -
853 1.38629 1.38629 1.38629 1.38629
854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
855 21 2.86982 3.47591 0.13017 3.36931 21 - -
856 1.38629 1.38629 1.38629 1.38629
857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
858 22 2.86982 3.47591 0.13017 3.36931 22 - -
859 1.38629 1.38629 1.38629 1.38629
860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
861 23 2.86982 3.47591 0.13017 3.36931 23 - -
862 1.38629 1.38629 1.38629 1.38629
863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
864 24 3.30705 0.14631 3.36166 2.73626 24 - -
865 1.38629 1.38629 1.38629 1.38629
866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
867 25 0.15719 3.27118 2.73043 3.16274 25 - -
868 1.38629 1.38629 1.38629 1.38629
869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
870 26 3.30705 0.14631 3.36166 2.73626 26 - -
871 1.38629 1.38629 1.38629 1.38629
872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
873 27 2.86982 3.47591 0.13017 3.36931 27 - -
874 1.38629 1.38629 1.38629 1.38629
875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
876 28 2.97980 2.52563 3.03204 0.19727 28 - -
877 1.38629 1.38629 1.38629 1.38629
878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
879 29 3.30705 0.14631 3.36166 2.73626 29 - -
880 1.38629 1.38629 1.38629 1.38629
881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
882 30 2.97980 2.52563 3.03204 0.19727 30 - -
883 1.38629 1.38629 1.38629 1.38629
884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
885 31 2.86982 3.47591 0.13017 3.36931 31 - -
886 1.38629 1.38629 1.38629 1.38629
887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
888 32 3.30705 0.14631 3.36166 2.73626 32 - -
889 1.38629 1.38629 1.38629 1.38629
890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
891 33 3.30705 0.14631 3.36166 2.73626 33 - -
892 1.38629 1.38629 1.38629 1.38629
893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
894 34 2.97980 2.52563 3.03204 0.19727 34 - -
895 1.38629 1.38629 1.38629 1.38629
896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
897 35 2.86982 3.47591 0.13017 3.36931 35 - -
898 1.38629 1.38629 1.38629 1.38629
899 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
900 36 2.86982 3.47591 0.13017 3.36931 36 - -
901 1.38629 1.38629 1.38629 1.38629
902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
903 37 2.86982 3.47591 0.13017 3.36931 37 - -
904 1.38629 1.38629 1.38629 1.38629
905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
906 38 3.30705 0.14631 3.36166 2.73626 38 - -
907 1.38629 1.38629 1.38629 1.38629
908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
909 39 2.86982 3.47591 0.13017 3.36931 39 - -
910 1.38629 1.38629 1.38629 1.38629
911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
912 40 2.97980 2.52563 3.03204 0.19727 40 - -
913 1.38629 1.38629 1.38629 1.38629
914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
915 41 3.30705 0.14631 3.36166 2.73626 41 - -
916 1.38629 1.38629 1.38629 1.38629
917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
918 42 2.97980 2.52563 3.03204 0.19727 42 - -
919 1.38629 1.38629 1.38629 1.38629
920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
921 43 3.30705 0.14631 3.36166 2.73626 43 - -
922 1.38629 1.38629 1.38629 1.38629
923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
924 44 2.86982 3.47591 0.13017 3.36931 44 - -
925 1.38629 1.38629 1.38629 1.38629
926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
927 45 3.30705 0.14631 3.36166 2.73626 45 - -
928 1.38629 1.38629 1.38629 1.38629
929 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
930 //
931 HMMER3/b [3.0 | March 2010]
932 NAME 3_End_Tracheophyta_58S_end_fifteend_long
933 LENG 45
934 ALPH DNA
935 RF no
936 CS no
937 MAP yes
938 DATE Sat Feb 18 00:59:30 2012
939 NSEQ 131
940 EFFN 4.801361
941 CKSUM 1080313258
942 STATS LOCAL MSV -6.9593 0.71932
943 STATS LOCAL VITERBI -7.6174 0.71932
944 STATS LOCAL FORWARD -3.7137 0.71932
945 HMM A C G T
946 m->m m->i m->d i->m i->i d->m d->d
947 COMPO 1.79265 1.06993 1.10887 1.82936
948 1.38629 1.38629 1.38629 1.38629
949 0.02898 4.24869 4.24869 1.46634 0.26236 0.00000 *
950 1 3.19616 3.95461 0.08375 3.89943 1 - -
951 1.38629 1.38629 1.38629 1.38629
952 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
953 2 3.85798 0.08914 3.88792 3.13085 2 - -
954 1.38629 1.38629 1.38629 1.38629
955 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
956 3 3.85798 0.08914 3.88792 3.13085 3 - -
957 1.38629 1.38629 1.38629 1.38629
958 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
959 4 3.85798 0.08914 3.88792 3.13085 4 - -
960 1.38629 1.38629 1.38629 1.38629
961 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
962 5 2.74199 3.28778 0.19714 2.56201 5 - -
963 1.38629 1.38629 1.38629 1.38629
964 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
965 6 0.10072 3.75644 3.04476 3.69519 6 - -
966 1.38629 1.38629 1.38629 1.38629
967 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
968 7 0.47413 2.89412 1.35031 2.76357 7 - -
969 1.38629 1.38629 1.38629 1.38629
970 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
971 8 3.14065 3.82544 0.10063 3.48448 8 - -
972 1.38629 1.38629 1.38629 1.38629
973 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
974 9 3.85798 0.08914 3.88792 3.13085 9 - -
975 1.38629 1.38629 1.38629 1.38629
976 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
977 10 3.79514 0.10078 3.82825 2.96338 10 - -
978 1.38629 1.38629 1.38629 1.38629
979 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
980 11 0.27431 2.43337 2.65241 2.50495 11 - -
981 1.38629 1.38629 1.38629 1.38629
982 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
983 12 2.81648 1.37717 2.87932 0.45931 12 - -
984 1.38629 1.38629 1.38629 1.38629
985 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
986 13 3.15429 2.00469 3.20368 0.24588 13 - -
987 1.38629 1.38629 1.38629 1.38629
988 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
989 14 0.87326 1.37662 1.80543 1.79832 14 - -
990 1.38629 1.38629 1.38629 1.38629
991 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
992 15 2.40378 2.35707 0.44543 1.74652 15 - -
993 1.38629 1.38629 1.38629 1.38629
994 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
995 16 3.19616 3.95461 0.08375 3.89943 16 - -
996 1.38629 1.38629 1.38629 1.38629
997 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
998 17 2.44960 0.55950 2.17179 1.47750 17 - -
999 1.38629 1.38629 1.38629 1.38629
1000 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1001 18 3.30475 0.21818 3.35916 2.08307 18 - -
1002 1.38629 1.38629 1.38629 1.38629
1003 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1004 19 2.98239 2.83730 0.15414 3.39352 19 - -
1005 1.38629 1.38629 1.38629 1.38629
1006 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1007 20 0.11390 3.70419 2.86929 3.63828 20 - -
1008 1.38629 1.38629 1.38629 1.38629
1009 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1010 21 3.19616 3.95461 0.08375 3.89943 21 - -
1011 1.38629 1.38629 1.38629 1.38629
1012 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1013 22 3.19616 3.95461 0.08375 3.89943 22 - -
1014 1.38629 1.38629 1.38629 1.38629
1015 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1016 23 3.14010 3.52927 0.10104 3.75100 23 - -
1017 1.38629 1.38629 1.38629 1.38629
1018 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1019 24 3.85798 0.08914 3.88792 3.13085 24 - -
1020 1.38629 1.38629 1.38629 1.38629
1021 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1022 25 0.10072 3.75644 3.04476 3.69519 25 - -
1023 1.38629 1.38629 1.38629 1.38629
1024 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1025 26 3.85798 0.08914 3.88792 3.13085 26 - -
1026 1.38629 1.38629 1.38629 1.38629
1027 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1028 27 3.19616 3.95461 0.08375 3.89943 27 - -
1029 1.38629 1.38629 1.38629 1.38629
1030 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1031 28 3.21562 2.13217 3.26215 0.21942 28 - -
1032 1.38629 1.38629 1.38629 1.38629
1033 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1034 29 3.79551 0.10072 3.82859 2.96428 29 - -
1035 1.38629 1.38629 1.38629 1.38629
1036 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1037 30 3.43944 2.69865 3.47444 0.13967 30 - -
1038 1.38629 1.38629 1.38629 1.38629
1039 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1040 31 3.19616 3.95461 0.08375 3.89943 31 - -
1041 1.38629 1.38629 1.38629 1.38629
1042 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1043 32 3.57082 0.14704 3.61478 2.50490 32 - -
1044 1.38629 1.38629 1.38629 1.38629
1045 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1046 33 3.85798 0.08914 3.88792 3.13085 33 - -
1047 1.38629 1.38629 1.38629 1.38629
1048 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1049 34 3.48600 2.84848 3.51857 0.12579 34 - -
1050 1.38629 1.38629 1.38629 1.38629
1051 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1052 35 3.19616 3.95461 0.08375 3.89943 35 - -
1053 1.38629 1.38629 1.38629 1.38629
1054 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1055 36 3.19616 3.95461 0.08375 3.89943 36 - -
1056 1.38629 1.38629 1.38629 1.38629
1057 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1058 37 3.19616 3.95461 0.08375 3.89943 37 - -
1059 1.38629 1.38629 1.38629 1.38629
1060 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1061 38 3.19029 0.13908 3.56005 2.80930 38 - -
1062 1.38629 1.38629 1.38629 1.38629
1063 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1064 39 3.19616 3.95461 0.08375 3.89943 39 - -
1065 1.38629 1.38629 1.38629 1.38629
1066 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1067 40 3.48600 2.84848 3.51857 0.12579 40 - -
1068 1.38629 1.38629 1.38629 1.38629
1069 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1070 41 3.85798 0.08914 3.88792 3.13085 41 - -
1071 1.38629 1.38629 1.38629 1.38629
1072 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1073 42 0.10072 3.75644 3.04476 3.69519 42 - -
1074 1.38629 1.38629 1.38629 1.38629
1075 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1076 43 3.03155 0.13827 3.54533 2.95589 43 - -
1077 1.38629 1.38629 1.38629 1.38629
1078 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1079 44 0.81984 2.48847 1.01425 2.17341 44 - -
1080 1.38629 1.38629 1.38629 1.38629
1081 0.02898 4.24869 4.24869 1.46634 0.26236 1.09861 0.40547
1082 45 3.72146 0.11504 3.75830 2.79450 45 - -
1083 1.38629 1.38629 1.38629 1.38629
1084 0.01460 4.23430 * 1.46634 0.26236 0.00000 *
1085 //
1086 HMMER3/b [3.0 | March 2010]
1087 NAME 3_End_Tracheophyta_58S_end_fivea_long
1088 LENG 45
1089 ALPH DNA
1090 RF no
1091 CS no
1092 MAP yes
1093 DATE Sat Feb 18 00:56:13 2012
1094 NSEQ 4
1095 EFFN 3.261719
1096 CKSUM 831295311
1097 STATS LOCAL MSV -8.3184 0.71932
1098 STATS LOCAL VITERBI -7.8263 0.71932
1099 STATS LOCAL FORWARD -3.4947 0.71932
1100 HMM A C G T
1101 m->m m->i m->d i->m i->i d->m d->d
1102 COMPO 1.92683 1.06762 1.03950 1.85194
1103 1.38629 1.38629 1.38629 1.38629
1104 0.03731 4.00035 4.00035 1.46634 0.26236 0.00000 *
1105 1 2.93372 3.56771 0.11938 3.47031 1 - -
1106 1.38629 1.38629 1.38629 1.38629
1107 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1108 2 3.41037 0.13295 3.46079 2.81242 2 - -
1109 1.38629 1.38629 1.38629 1.38629
1110 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1111 3 3.41037 0.13295 3.46079 2.81242 3 - -
1112 1.38629 1.38629 1.38629 1.38629
1113 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1114 4 3.41037 0.13295 3.46079 2.81242 4 - -
1115 1.38629 1.38629 1.38629 1.38629
1116 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1117 5 2.93372 3.56771 0.11938 3.47031 5 - -
1118 1.38629 1.38629 1.38629 1.38629
1119 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1120 6 0.14453 3.36055 2.78910 3.26035 6 - -
1121 1.38629 1.38629 1.38629 1.38629
1122 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1123 7 0.14453 3.36055 2.78910 3.26035 7 - -
1124 1.38629 1.38629 1.38629 1.38629
1125 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1126 8 2.93372 3.56771 0.11938 3.47031 8 - -
1127 1.38629 1.38629 1.38629 1.38629
1128 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1129 9 3.41037 0.13295 3.46079 2.81242 9 - -
1130 1.38629 1.38629 1.38629 1.38629
1131 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1132 10 3.41037 0.13295 3.46079 2.81242 10 - -
1133 1.38629 1.38629 1.38629 1.38629
1134 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1135 11 3.06875 2.58250 3.11766 0.18191 11 - -
1136 1.38629 1.38629 1.38629 1.38629
1137 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1138 12 3.06875 2.58250 3.11766 0.18191 12 - -
1139 1.38629 1.38629 1.38629 1.38629
1140 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1141 13 3.41037 0.13295 3.46079 2.81242 13 - -
1142 1.38629 1.38629 1.38629 1.38629
1143 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1144 14 2.93372 3.56771 0.11938 3.47031 14 - -
1145 1.38629 1.38629 1.38629 1.38629
1146 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1147 15 2.93372 3.56771 0.11938 3.47031 15 - -
1148 1.38629 1.38629 1.38629 1.38629
1149 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1150 16 2.93372 3.56771 0.11938 3.47031 16 - -
1151 1.38629 1.38629 1.38629 1.38629
1152 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1153 17 2.39444 0.95945 2.46670 0.81914 17 - -
1154 1.38629 1.38629 1.38629 1.38629
1155 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1156 18 2.39444 0.95945 2.46670 0.81914 18 - -
1157 1.38629 1.38629 1.38629 1.38629
1158 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1159 19 2.93372 3.56771 0.11938 3.47031 19 - -
1160 1.38629 1.38629 1.38629 1.38629
1161 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1162 20 0.14453 3.36055 2.78910 3.26035 20 - -
1163 1.38629 1.38629 1.38629 1.38629
1164 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1165 21 2.93372 3.56771 0.11938 3.47031 21 - -
1166 1.38629 1.38629 1.38629 1.38629
1167 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1168 22 2.93372 3.56771 0.11938 3.47031 22 - -
1169 1.38629 1.38629 1.38629 1.38629
1170 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1171 23 2.93372 3.56771 0.11938 3.47031 23 - -
1172 1.38629 1.38629 1.38629 1.38629
1173 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1174 24 3.41037 0.13295 3.46079 2.81242 24 - -
1175 1.38629 1.38629 1.38629 1.38629
1176 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1177 25 0.14453 3.36055 2.78910 3.26035 25 - -
1178 1.38629 1.38629 1.38629 1.38629
1179 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1180 26 3.41037 0.13295 3.46079 2.81242 26 - -
1181 1.38629 1.38629 1.38629 1.38629
1182 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1183 27 2.93372 3.56771 0.11938 3.47031 27 - -
1184 1.38629 1.38629 1.38629 1.38629
1185 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1186 28 3.41037 0.13295 3.46079 2.81242 28 - -
1187 1.38629 1.38629 1.38629 1.38629
1188 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1189 29 3.41037 0.13295 3.46079 2.81242 29 - -
1190 1.38629 1.38629 1.38629 1.38629
1191 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1192 30 3.06875 2.58250 3.11766 0.18191 30 - -
1193 1.38629 1.38629 1.38629 1.38629
1194 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1195 31 2.93372 3.56771 0.11938 3.47031 31 - -
1196 1.38629 1.38629 1.38629 1.38629
1197 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1198 32 3.41037 0.13295 3.46079 2.81242 32 - -
1199 1.38629 1.38629 1.38629 1.38629
1200 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1201 33 3.41037 0.13295 3.46079 2.81242 33 - -
1202 1.38629 1.38629 1.38629 1.38629
1203 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1204 34 3.06875 2.58250 3.11766 0.18191 34 - -
1205 1.38629 1.38629 1.38629 1.38629
1206 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1207 35 2.93372 3.56771 0.11938 3.47031 35 - -
1208 1.38629 1.38629 1.38629 1.38629
1209 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1210 36 2.93372 3.56771 0.11938 3.47031 36 - -
1211 1.38629 1.38629 1.38629 1.38629
1212 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1213 37 2.93372 3.56771 0.11938 3.47031 37 - -
1214 1.38629 1.38629 1.38629 1.38629
1215 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1216 38 3.41037 0.13295 3.46079 2.81242 38 - -
1217 1.38629 1.38629 1.38629 1.38629
1218 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1219 39 2.93372 3.56771 0.11938 3.47031 39 - -
1220 1.38629 1.38629 1.38629 1.38629
1221 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1222 40 3.06875 2.58250 3.11766 0.18191 40 - -
1223 1.38629 1.38629 1.38629 1.38629
1224 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1225 41 3.41037 0.13295 3.46079 2.81242 41 - -
1226 1.38629 1.38629 1.38629 1.38629
1227 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1228 42 0.14453 3.36055 2.78910 3.26035 42 - -
1229 1.38629 1.38629 1.38629 1.38629
1230 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1231 43 3.41037 0.13295 3.46079 2.81242 43 - -
1232 1.38629 1.38629 1.38629 1.38629
1233 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1234 44 2.93372 3.56771 0.11938 3.47031 44 - -
1235 1.38629 1.38629 1.38629 1.38629
1236 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
1237 45 3.41037 0.13295 3.46079 2.81242 45 - -
1238 1.38629 1.38629 1.38629 1.38629
1239 0.01883 3.98187 * 1.46634 0.26236 0.00000 *
1240 //
1241 HMMER3/b [3.0 | March 2010]
1242 NAME 3_End_Tracheophyta_58S_end_fiveb_long
1243 LENG 45
1244 ALPH DNA
1245 RF no
1246 CS no
1247 MAP yes
1248 DATE Sat Feb 18 00:56:22 2012
1249 NSEQ 3
1250 EFFN 3.000000
1251 CKSUM 2338491015
1252 STATS LOCAL MSV -8.2394 0.72008
1253 STATS LOCAL VITERBI -7.8111 0.72008
1254 STATS LOCAL FORWARD -3.6939 0.72008
1255 HMM A C G T
1256 m->m m->i m->d i->m i->i d->m d->d
1257 COMPO 1.69406 1.11036 1.08253 1.91020
1258 1.38629 1.38629 1.38629 1.38629
1259 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
1260 1 2.86982 3.47591 0.13017 3.36931 1 - -
1261 1.38629 1.38629 1.38629 1.38629
1262 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1263 2 3.30705 0.14631 3.36166 2.73626 2 - -
1264 1.38629 1.38629 1.38629 1.38629
1265 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1266 3 3.30705 0.14631 3.36166 2.73626 3 - -
1267 1.38629 1.38629 1.38629 1.38629
1268 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1269 4 3.30705 0.14631 3.36166 2.73626 4 - -
1270 1.38629 1.38629 1.38629 1.38629
1271 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1272 5 2.86982 3.47591 0.13017 3.36931 5 - -
1273 1.38629 1.38629 1.38629 1.38629
1274 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1275 6 0.15719 3.27118 2.73043 3.16274 6 - -
1276 1.38629 1.38629 1.38629 1.38629
1277 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1278 7 0.15719 3.27118 2.73043 3.16274 7 - -
1279 1.38629 1.38629 1.38629 1.38629
1280 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1281 8 2.86982 3.47591 0.13017 3.36931 8 - -
1282 1.38629 1.38629 1.38629 1.38629
1283 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1284 9 3.30705 0.14631 3.36166 2.73626 9 - -
1285 1.38629 1.38629 1.38629 1.38629
1286 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1287 10 3.30705 0.14631 3.36166 2.73626 10 - -
1288 1.38629 1.38629 1.38629 1.38629
1289 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1290 11 1.22293 1.99551 1.27815 1.23396 11 - -
1291 1.38629 1.38629 1.38629 1.38629
1292 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1293 12 2.97980 2.52563 3.03204 0.19727 12 - -
1294 1.38629 1.38629 1.38629 1.38629
1295 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1296 13 2.97980 2.52563 3.03204 0.19727 13 - -
1297 1.38629 1.38629 1.38629 1.38629
1298 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1299 14 0.15719 3.27118 2.73043 3.16274 14 - -
1300 1.38629 1.38629 1.38629 1.38629
1301 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1302 15 2.86982 3.47591 0.13017 3.36931 15 - -
1303 1.38629 1.38629 1.38629 1.38629
1304 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1305 16 2.86982 3.47591 0.13017 3.36931 16 - -
1306 1.38629 1.38629 1.38629 1.38629
1307 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1308 17 0.15719 3.27118 2.73043 3.16274 17 - -
1309 1.38629 1.38629 1.38629 1.38629
1310 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1311 18 3.30705 0.14631 3.36166 2.73626 18 - -
1312 1.38629 1.38629 1.38629 1.38629
1313 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1314 19 2.86982 3.47591 0.13017 3.36931 19 - -
1315 1.38629 1.38629 1.38629 1.38629
1316 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1317 20 0.15719 3.27118 2.73043 3.16274 20 - -
1318 1.38629 1.38629 1.38629 1.38629
1319 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1320 21 2.86982 3.47591 0.13017 3.36931 21 - -
1321 1.38629 1.38629 1.38629 1.38629
1322 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1323 22 2.86982 3.47591 0.13017 3.36931 22 - -
1324 1.38629 1.38629 1.38629 1.38629
1325 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1326 23 2.86982 3.47591 0.13017 3.36931 23 - -
1327 1.38629 1.38629 1.38629 1.38629
1328 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1329 24 3.30705 0.14631 3.36166 2.73626 24 - -
1330 1.38629 1.38629 1.38629 1.38629
1331 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1332 25 0.15719 3.27118 2.73043 3.16274 25 - -
1333 1.38629 1.38629 1.38629 1.38629
1334 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1335 26 3.30705 0.14631 3.36166 2.73626 26 - -
1336 1.38629 1.38629 1.38629 1.38629
1337 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1338 27 2.86982 3.47591 0.13017 3.36931 27 - -
1339 1.38629 1.38629 1.38629 1.38629
1340 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1341 28 3.30705 0.14631 3.36166 2.73626 28 - -
1342 1.38629 1.38629 1.38629 1.38629
1343 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1344 29 3.30705 0.14631 3.36166 2.73626 29 - -
1345 1.38629 1.38629 1.38629 1.38629
1346 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1347 30 2.97980 2.52563 3.03204 0.19727 30 - -
1348 1.38629 1.38629 1.38629 1.38629
1349 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1350 31 2.86982 3.47591 0.13017 3.36931 31 - -
1351 1.38629 1.38629 1.38629 1.38629
1352 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1353 32 3.30705 0.14631 3.36166 2.73626 32 - -
1354 1.38629 1.38629 1.38629 1.38629
1355 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1356 33 3.30705 0.14631 3.36166 2.73626 33 - -
1357 1.38629 1.38629 1.38629 1.38629
1358 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1359 34 2.97980 2.52563 3.03204 0.19727 34 - -
1360 1.38629 1.38629 1.38629 1.38629
1361 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1362 35 2.86982 3.47591 0.13017 3.36931 35 - -
1363 1.38629 1.38629 1.38629 1.38629
1364 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1365 36 2.86982 3.47591 0.13017 3.36931 36 - -
1366 1.38629 1.38629 1.38629 1.38629
1367 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1368 37 2.86982 3.47591 0.13017 3.36931 37 - -
1369 1.38629 1.38629 1.38629 1.38629
1370 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1371 38 3.30705 0.14631 3.36166 2.73626 38 - -
1372 1.38629 1.38629 1.38629 1.38629
1373 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1374 39 2.86982 3.47591 0.13017 3.36931 39 - -
1375 1.38629 1.38629 1.38629 1.38629
1376 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1377 40 2.97980 2.52563 3.03204 0.19727 40 - -
1378 1.38629 1.38629 1.38629 1.38629
1379 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1380 41 3.30705 0.14631 3.36166 2.73626 41 - -
1381 1.38629 1.38629 1.38629 1.38629
1382 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1383 42 0.15719 3.27118 2.73043 3.16274 42 - -
1384 1.38629 1.38629 1.38629 1.38629
1385 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1386 43 3.30705 0.14631 3.36166 2.73626 43 - -
1387 1.38629 1.38629 1.38629 1.38629
1388 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1389 44 2.86982 3.47591 0.13017 3.36931 44 - -
1390 1.38629 1.38629 1.38629 1.38629
1391 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
1392 45 3.30705 0.14631 3.36166 2.73626 45 - -
1393 1.38629 1.38629 1.38629 1.38629
1394 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
1395 //
1396 HMMER3/b [3.0 | March 2010]
1397 NAME 3_End_Tracheophyta_58S_end_fortya_long
1398 LENG 45
1399 ALPH DNA
1400 RF no
1401 CS no
1402 MAP yes
1403 DATE Sat Feb 18 01:12:04 2012
1404 NSEQ 18
1405 EFFN 3.783691
1406 CKSUM 1791042696
1407 STATS LOCAL MSV -6.8741 0.71932
1408 STATS LOCAL VITERBI -7.8612 0.71932
1409 STATS LOCAL FORWARD -3.9250 0.71932
1410 HMM A C G T
1411 m->m m->i m->d i->m i->i d->m d->d
1412 COMPO 2.00396 1.23406 1.19203 1.30753
1413 1.38629 1.38629 1.38629 1.38629
1414 0.03400 4.09162 4.09162 1.46634 0.26236 0.00000 *
1415 1 3.04077 3.72472 0.10321 3.64403 1 - -
1416 1.38629 1.38629 1.38629 1.38629
1417 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1418 2 3.58999 0.11296 3.63254 2.94190 2 - -
1419 1.38629 1.38629 1.38629 1.38629
1420 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1421 3 3.04077 3.72472 0.10321 3.64403 3 - -
1422 1.38629 1.38629 1.38629 1.38629
1423 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1424 4 3.58999 0.11296 3.63254 2.94190 4 - -
1425 1.38629 1.38629 1.38629 1.38629
1426 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1427 5 3.58999 0.11296 3.63254 2.94190 5 - -
1428 1.38629 1.38629 1.38629 1.38629
1429 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1430 6 3.58999 0.11296 3.63254 2.94190 6 - -
1431 1.38629 1.38629 1.38629 1.38629
1432 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1433 7 3.11499 0.23213 3.17409 2.11243 7 - -
1434 1.38629 1.38629 1.38629 1.38629
1435 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1436 8 2.61323 1.38493 2.67966 0.49795 8 - -
1437 1.38629 1.38629 1.38629 1.38629
1438 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1439 9 3.22897 2.68419 3.27168 0.15761 9 - -
1440 1.38629 1.38629 1.38629 1.38629
1441 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1442 10 3.04077 3.72472 0.10321 3.64403 10 - -
1443 1.38629 1.38629 1.38629 1.38629
1444 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1445 11 3.04077 3.72472 0.10321 3.64403 11 - -
1446 1.38629 1.38629 1.38629 1.38629
1447 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1448 12 3.22897 2.68419 3.27168 0.15761 12 - -
1449 1.38629 1.38629 1.38629 1.38629
1450 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1451 13 0.12508 3.51713 2.89021 3.43205 13 - -
1452 1.38629 1.38629 1.38629 1.38629
1453 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1454 14 3.22897 2.68419 3.27168 0.15761 14 - -
1455 1.38629 1.38629 1.38629 1.38629
1456 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1457 15 3.22897 2.68419 3.27168 0.15761 15 - -
1458 1.38629 1.38629 1.38629 1.38629
1459 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1460 16 3.58999 0.11296 3.63254 2.94190 16 - -
1461 1.38629 1.38629 1.38629 1.38629
1462 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1463 17 3.58999 0.11296 3.63254 2.94190 17 - -
1464 1.38629 1.38629 1.38629 1.38629
1465 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1466 18 1.82319 3.02529 0.30812 2.89828 18 - -
1467 1.38629 1.38629 1.38629 1.38629
1468 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1469 19 1.28550 2.07537 1.18600 1.22916 19 - -
1470 1.38629 1.38629 1.38629 1.38629
1471 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1472 20 2.25442 3.31379 0.20081 3.20344 20 - -
1473 1.38629 1.38629 1.38629 1.38629
1474 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1475 21 3.04077 3.72472 0.10321 3.64403 21 - -
1476 1.38629 1.38629 1.38629 1.38629
1477 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1478 22 3.04077 3.72472 0.10321 3.64403 22 - -
1479 1.38629 1.38629 1.38629 1.38629
1480 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1481 23 3.04077 3.72472 0.10321 3.64403 23 - -
1482 1.38629 1.38629 1.38629 1.38629
1483 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1484 24 3.58999 0.11296 3.63254 2.94190 24 - -
1485 1.38629 1.38629 1.38629 1.38629
1486 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1487 25 0.12508 3.51713 2.89021 3.43205 25 - -
1488 1.38629 1.38629 1.38629 1.38629
1489 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1490 26 3.22897 2.68419 3.27168 0.15761 26 - -
1491 1.38629 1.38629 1.38629 1.38629
1492 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1493 27 3.04077 3.72472 0.10321 3.64403 27 - -
1494 1.38629 1.38629 1.38629 1.38629
1495 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1496 28 3.58999 0.11296 3.63254 2.94190 28 - -
1497 1.38629 1.38629 1.38629 1.38629
1498 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1499 29 3.58999 0.11296 3.63254 2.94190 29 - -
1500 1.38629 1.38629 1.38629 1.38629
1501 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1502 30 3.22897 2.68419 3.27168 0.15761 30 - -
1503 1.38629 1.38629 1.38629 1.38629
1504 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1505 31 3.04077 3.72472 0.10321 3.64403 31 - -
1506 1.38629 1.38629 1.38629 1.38629
1507 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1508 32 3.22897 2.68419 3.27168 0.15761 32 - -
1509 1.38629 1.38629 1.38629 1.38629
1510 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1511 33 3.22897 2.68419 3.27168 0.15761 33 - -
1512 1.38629 1.38629 1.38629 1.38629
1513 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1514 34 3.58999 0.11296 3.63254 2.94190 34 - -
1515 1.38629 1.38629 1.38629 1.38629
1516 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1517 35 3.04077 3.72472 0.10321 3.64403 35 - -
1518 1.38629 1.38629 1.38629 1.38629
1519 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1520 36 0.12508 3.51713 2.89021 3.43205 36 - -
1521 1.38629 1.38629 1.38629 1.38629
1522 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1523 37 3.04077 3.72472 0.10321 3.64403 37 - -
1524 1.38629 1.38629 1.38629 1.38629
1525 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1526 38 3.58999 0.11296 3.63254 2.94190 38 - -
1527 1.38629 1.38629 1.38629 1.38629
1528 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1529 39 3.04077 3.72472 0.10321 3.64403 39 - -
1530 1.38629 1.38629 1.38629 1.38629
1531 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1532 40 3.22897 2.68419 3.27168 0.15761 40 - -
1533 1.38629 1.38629 1.38629 1.38629
1534 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1535 41 3.58999 0.11296 3.63254 2.94190 41 - -
1536 1.38629 1.38629 1.38629 1.38629
1537 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1538 42 0.12508 3.51713 2.89021 3.43205 42 - -
1539 1.38629 1.38629 1.38629 1.38629
1540 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1541 43 3.22897 2.68419 3.27168 0.15761 43 - -
1542 1.38629 1.38629 1.38629 1.38629
1543 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1544 44 3.22897 2.68419 3.27168 0.15761 44 - -
1545 1.38629 1.38629 1.38629 1.38629
1546 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
1547 45 1.83918 2.36226 2.57124 0.39987 45 - -
1548 1.38629 1.38629 1.38629 1.38629
1549 0.01714 4.07477 * 1.46634 0.26236 0.00000 *
1550 //
1551 HMMER3/b [3.0 | March 2010]
1552 NAME 3_End_Tracheophyta_58S_end_fortyb_long
1553 LENG 45
1554 ALPH DNA
1555 RF no
1556 CS no
1557 MAP yes
1558 DATE Sat Feb 18 01:12:10 2012
1559 NSEQ 2
1560 EFFN 2.000000
1561 CKSUM 32026895
1562 STATS LOCAL MSV -7.5235 0.72779
1563 STATS LOCAL VITERBI -8.3648 0.72779
1564 STATS LOCAL FORWARD -3.5398 0.72779
1565 HMM A C G T
1566 m->m m->i m->d i->m i->i d->m d->d
1567 COMPO 1.83079 1.23420 1.21908 1.37379
1568 1.38629 1.38629 1.38629 1.38629
1569 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1570 1 2.53331 3.02441 0.20344 2.88069 1 - -
1571 1.38629 1.38629 1.38629 1.38629
1572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1573 2 2.81865 0.23582 2.88868 2.35662 2 - -
1574 1.38629 1.38629 1.38629 1.38629
1575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1576 3 2.53331 3.02441 0.20344 2.88069 3 - -
1577 1.38629 1.38629 1.38629 1.38629
1578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1579 4 2.81865 0.23582 2.88868 2.35662 4 - -
1580 1.38629 1.38629 1.38629 1.38629
1581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1582 5 2.81865 0.23582 2.88868 2.35662 5 - -
1583 1.38629 1.38629 1.38629 1.38629
1584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1585 6 2.81865 0.23582 2.88868 2.35662 6 - -
1586 1.38629 1.38629 1.38629 1.38629
1587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1588 7 2.53331 3.02441 0.20344 2.88069 7 - -
1589 1.38629 1.38629 1.38629 1.38629
1590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1591 8 2.81865 0.23582 2.88868 2.35662 8 - -
1592 1.38629 1.38629 1.38629 1.38629
1593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1594 9 2.81865 0.23582 2.88868 2.35662 9 - -
1595 1.38629 1.38629 1.38629 1.38629
1596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1597 10 0.23862 2.84929 2.43386 2.70756 10 - -
1598 1.38629 1.38629 1.38629 1.38629
1599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1600 11 2.53331 3.02441 0.20344 2.88069 11 - -
1601 1.38629 1.38629 1.38629 1.38629
1602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1603 12 2.57915 2.25909 2.64442 0.28946 12 - -
1604 1.38629 1.38629 1.38629 1.38629
1605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1606 13 0.23862 2.84929 2.43386 2.70756 13 - -
1607 1.38629 1.38629 1.38629 1.38629
1608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1609 14 2.57915 2.25909 2.64442 0.28946 14 - -
1610 1.38629 1.38629 1.38629 1.38629
1611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1612 15 2.57915 2.25909 2.64442 0.28946 15 - -
1613 1.38629 1.38629 1.38629 1.38629
1614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1615 16 2.81865 0.23582 2.88868 2.35662 16 - -
1616 1.38629 1.38629 1.38629 1.38629
1617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1618 17 2.57915 2.25909 2.64442 0.28946 17 - -
1619 1.38629 1.38629 1.38629 1.38629
1620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1621 18 2.53331 3.02441 0.20344 2.88069 18 - -
1622 1.38629 1.38629 1.38629 1.38629
1623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1624 19 2.53331 3.02441 0.20344 2.88069 19 - -
1625 1.38629 1.38629 1.38629 1.38629
1626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1627 20 2.81865 0.23582 2.88868 2.35662 20 - -
1628 1.38629 1.38629 1.38629 1.38629
1629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1630 21 2.53331 3.02441 0.20344 2.88069 21 - -
1631 1.38629 1.38629 1.38629 1.38629
1632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1633 22 2.53331 3.02441 0.20344 2.88069 22 - -
1634 1.38629 1.38629 1.38629 1.38629
1635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1636 23 2.53331 3.02441 0.20344 2.88069 23 - -
1637 1.38629 1.38629 1.38629 1.38629
1638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1639 24 2.81865 0.23582 2.88868 2.35662 24 - -
1640 1.38629 1.38629 1.38629 1.38629
1641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1642 25 0.23862 2.84929 2.43386 2.70756 25 - -
1643 1.38629 1.38629 1.38629 1.38629
1644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1645 26 2.57915 2.25909 2.64442 0.28946 26 - -
1646 1.38629 1.38629 1.38629 1.38629
1647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1648 27 2.53331 3.02441 0.20344 2.88069 27 - -
1649 1.38629 1.38629 1.38629 1.38629
1650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1651 28 2.81865 0.23582 2.88868 2.35662 28 - -
1652 1.38629 1.38629 1.38629 1.38629
1653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1654 29 2.81865 0.23582 2.88868 2.35662 29 - -
1655 1.38629 1.38629 1.38629 1.38629
1656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1657 30 2.57915 2.25909 2.64442 0.28946 30 - -
1658 1.38629 1.38629 1.38629 1.38629
1659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1660 31 2.53331 3.02441 0.20344 2.88069 31 - -
1661 1.38629 1.38629 1.38629 1.38629
1662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1663 32 2.57915 2.25909 2.64442 0.28946 32 - -
1664 1.38629 1.38629 1.38629 1.38629
1665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1666 33 2.57915 2.25909 2.64442 0.28946 33 - -
1667 1.38629 1.38629 1.38629 1.38629
1668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1669 34 2.81865 0.23582 2.88868 2.35662 34 - -
1670 1.38629 1.38629 1.38629 1.38629
1671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1672 35 2.53331 3.02441 0.20344 2.88069 35 - -
1673 1.38629 1.38629 1.38629 1.38629
1674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1675 36 0.23862 2.84929 2.43386 2.70756 36 - -
1676 1.38629 1.38629 1.38629 1.38629
1677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1678 37 2.53331 3.02441 0.20344 2.88069 37 - -
1679 1.38629 1.38629 1.38629 1.38629
1680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1681 38 2.81865 0.23582 2.88868 2.35662 38 - -
1682 1.38629 1.38629 1.38629 1.38629
1683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1684 39 2.53331 3.02441 0.20344 2.88069 39 - -
1685 1.38629 1.38629 1.38629 1.38629
1686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1687 40 2.57915 2.25909 2.64442 0.28946 40 - -
1688 1.38629 1.38629 1.38629 1.38629
1689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1690 41 2.81865 0.23582 2.88868 2.35662 41 - -
1691 1.38629 1.38629 1.38629 1.38629
1692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1693 42 0.23862 2.84929 2.43386 2.70756 42 - -
1694 1.38629 1.38629 1.38629 1.38629
1695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1696 43 2.57915 2.25909 2.64442 0.28946 43 - -
1697 1.38629 1.38629 1.38629 1.38629
1698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1699 44 2.57915 2.25909 2.64442 0.28946 44 - -
1700 1.38629 1.38629 1.38629 1.38629
1701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1702 45 2.57915 2.25909 2.64442 0.28946 45 - -
1703 1.38629 1.38629 1.38629 1.38629
1704 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1705 //
1706 HMMER3/b [3.0 | March 2010]
1707 NAME 3_End_Tracheophyta_58S_end_fortyc_long
1708 LENG 45
1709 ALPH DNA
1710 RF no
1711 CS no
1712 MAP yes
1713 DATE Sat Feb 18 01:12:17 2012
1714 NSEQ 2
1715 EFFN 2.000000
1716 CKSUM 2184984864
1717 STATS LOCAL MSV -7.4094 0.72832
1718 STATS LOCAL VITERBI -8.3948 0.72832
1719 STATS LOCAL FORWARD -3.4932 0.72832
1720 HMM A C G T
1721 m->m m->i m->d i->m i->i d->m d->d
1722 COMPO 1.66233 1.38558 1.31979 1.22781
1723 1.38629 1.38629 1.38629 1.38629
1724 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1725 1 2.53331 3.02441 0.20344 2.88069 1 - -
1726 1.38629 1.38629 1.38629 1.38629
1727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1728 2 2.81865 0.23582 2.88868 2.35662 2 - -
1729 1.38629 1.38629 1.38629 1.38629
1730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1731 3 2.53331 3.02441 0.20344 2.88069 3 - -
1732 1.38629 1.38629 1.38629 1.38629
1733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1734 4 2.81865 0.23582 2.88868 2.35662 4 - -
1735 1.38629 1.38629 1.38629 1.38629
1736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1737 5 2.81865 0.23582 2.88868 2.35662 5 - -
1738 1.38629 1.38629 1.38629 1.38629
1739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1740 6 2.81865 0.23582 2.88868 2.35662 6 - -
1741 1.38629 1.38629 1.38629 1.38629
1742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1743 7 0.23862 2.84929 2.43386 2.70756 7 - -
1744 1.38629 1.38629 1.38629 1.38629
1745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1746 8 2.57915 2.25909 2.64442 0.28946 8 - -
1747 1.38629 1.38629 1.38629 1.38629
1748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1749 9 2.57915 2.25909 2.64442 0.28946 9 - -
1750 1.38629 1.38629 1.38629 1.38629
1751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1752 10 0.23862 2.84929 2.43386 2.70756 10 - -
1753 1.38629 1.38629 1.38629 1.38629
1754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1755 11 2.53331 3.02441 0.20344 2.88069 11 - -
1756 1.38629 1.38629 1.38629 1.38629
1757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1758 12 2.57915 2.25909 2.64442 0.28946 12 - -
1759 1.38629 1.38629 1.38629 1.38629
1760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1761 13 0.23862 2.84929 2.43386 2.70756 13 - -
1762 1.38629 1.38629 1.38629 1.38629
1763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1764 14 2.57915 2.25909 2.64442 0.28946 14 - -
1765 1.38629 1.38629 1.38629 1.38629
1766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1767 15 2.57915 2.25909 2.64442 0.28946 15 - -
1768 1.38629 1.38629 1.38629 1.38629
1769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1770 16 2.81865 0.23582 2.88868 2.35662 16 - -
1771 1.38629 1.38629 1.38629 1.38629
1772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1773 17 2.57915 2.25909 2.64442 0.28946 17 - -
1774 1.38629 1.38629 1.38629 1.38629
1775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1776 18 0.23862 2.84929 2.43386 2.70756 18 - -
1777 1.38629 1.38629 1.38629 1.38629
1778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1779 19 2.53331 3.02441 0.20344 2.88069 19 - -
1780 1.38629 1.38629 1.38629 1.38629
1781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1782 20 2.57915 2.25909 2.64442 0.28946 20 - -
1783 1.38629 1.38629 1.38629 1.38629
1784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1785 21 2.53331 3.02441 0.20344 2.88069 21 - -
1786 1.38629 1.38629 1.38629 1.38629
1787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1788 22 2.53331 3.02441 0.20344 2.88069 22 - -
1789 1.38629 1.38629 1.38629 1.38629
1790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1791 23 2.53331 3.02441 0.20344 2.88069 23 - -
1792 1.38629 1.38629 1.38629 1.38629
1793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1794 24 2.81865 0.23582 2.88868 2.35662 24 - -
1795 1.38629 1.38629 1.38629 1.38629
1796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1797 25 0.23862 2.84929 2.43386 2.70756 25 - -
1798 1.38629 1.38629 1.38629 1.38629
1799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1800 26 2.57915 2.25909 2.64442 0.28946 26 - -
1801 1.38629 1.38629 1.38629 1.38629
1802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1803 27 2.53331 3.02441 0.20344 2.88069 27 - -
1804 1.38629 1.38629 1.38629 1.38629
1805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1806 28 2.81865 0.23582 2.88868 2.35662 28 - -
1807 1.38629 1.38629 1.38629 1.38629
1808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1809 29 2.81865 0.23582 2.88868 2.35662 29 - -
1810 1.38629 1.38629 1.38629 1.38629
1811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1812 30 2.57915 2.25909 2.64442 0.28946 30 - -
1813 1.38629 1.38629 1.38629 1.38629
1814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1815 31 2.53331 3.02441 0.20344 2.88069 31 - -
1816 1.38629 1.38629 1.38629 1.38629
1817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1818 32 2.57915 2.25909 2.64442 0.28946 32 - -
1819 1.38629 1.38629 1.38629 1.38629
1820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1821 33 2.57915 2.25909 2.64442 0.28946 33 - -
1822 1.38629 1.38629 1.38629 1.38629
1823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1824 34 2.81865 0.23582 2.88868 2.35662 34 - -
1825 1.38629 1.38629 1.38629 1.38629
1826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1827 35 2.53331 3.02441 0.20344 2.88069 35 - -
1828 1.38629 1.38629 1.38629 1.38629
1829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1830 36 0.23862 2.84929 2.43386 2.70756 36 - -
1831 1.38629 1.38629 1.38629 1.38629
1832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1833 37 2.53331 3.02441 0.20344 2.88069 37 - -
1834 1.38629 1.38629 1.38629 1.38629
1835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1836 38 2.81865 0.23582 2.88868 2.35662 38 - -
1837 1.38629 1.38629 1.38629 1.38629
1838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1839 39 2.53331 3.02441 0.20344 2.88069 39 - -
1840 1.38629 1.38629 1.38629 1.38629
1841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1842 40 2.57915 2.25909 2.64442 0.28946 40 - -
1843 1.38629 1.38629 1.38629 1.38629
1844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1845 41 2.81865 0.23582 2.88868 2.35662 41 - -
1846 1.38629 1.38629 1.38629 1.38629
1847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1848 42 0.23862 2.84929 2.43386 2.70756 42 - -
1849 1.38629 1.38629 1.38629 1.38629
1850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1851 43 2.57915 2.25909 2.64442 0.28946 43 - -
1852 1.38629 1.38629 1.38629 1.38629
1853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1854 44 2.57915 2.25909 2.64442 0.28946 44 - -
1855 1.38629 1.38629 1.38629 1.38629
1856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1857 45 2.57915 2.25909 2.64442 0.28946 45 - -
1858 1.38629 1.38629 1.38629 1.38629
1859 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1860 //
1861 HMMER3/b [3.0 | March 2010]
1862 NAME 3_End_Tracheophyta_58S_end_fortyonea_long
1863 LENG 45
1864 ALPH DNA
1865 RF no
1866 CS no
1867 MAP yes
1868 DATE Sat Feb 18 01:12:27 2012
1869 NSEQ 2
1870 EFFN 2.000000
1871 CKSUM 2924481573
1872 STATS LOCAL MSV -7.4101 0.72843
1873 STATS LOCAL VITERBI -8.3691 0.72843
1874 STATS LOCAL FORWARD -3.6455 0.72843
1875 HMM A C G T
1876 m->m m->i m->d i->m i->i d->m d->d
1877 COMPO 1.74074 1.38343 1.32314 1.17898
1878 1.38629 1.38629 1.38629 1.38629
1879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1880 1 2.57915 2.25909 2.64442 0.28946 1 - -
1881 1.38629 1.38629 1.38629 1.38629
1882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1883 2 2.57915 2.25909 2.64442 0.28946 2 - -
1884 1.38629 1.38629 1.38629 1.38629
1885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1886 3 2.53331 3.02441 0.20344 2.88069 3 - -
1887 1.38629 1.38629 1.38629 1.38629
1888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1889 4 2.81865 0.23582 2.88868 2.35662 4 - -
1890 1.38629 1.38629 1.38629 1.38629
1891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1892 5 2.53331 3.02441 0.20344 2.88069 5 - -
1893 1.38629 1.38629 1.38629 1.38629
1894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1895 6 2.81865 0.23582 2.88868 2.35662 6 - -
1896 1.38629 1.38629 1.38629 1.38629
1897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1898 7 2.81865 0.23582 2.88868 2.35662 7 - -
1899 1.38629 1.38629 1.38629 1.38629
1900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1901 8 2.81865 0.23582 2.88868 2.35662 8 - -
1902 1.38629 1.38629 1.38629 1.38629
1903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1904 9 2.57915 2.25909 2.64442 0.28946 9 - -
1905 1.38629 1.38629 1.38629 1.38629
1906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1907 10 0.23862 2.84929 2.43386 2.70756 10 - -
1908 1.38629 1.38629 1.38629 1.38629
1909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1910 11 2.53331 3.02441 0.20344 2.88069 11 - -
1911 1.38629 1.38629 1.38629 1.38629
1912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1913 12 2.57915 2.25909 2.64442 0.28946 12 - -
1914 1.38629 1.38629 1.38629 1.38629
1915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1916 13 0.23862 2.84929 2.43386 2.70756 13 - -
1917 1.38629 1.38629 1.38629 1.38629
1918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1919 14 2.57915 2.25909 2.64442 0.28946 14 - -
1920 1.38629 1.38629 1.38629 1.38629
1921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1922 15 2.57915 2.25909 2.64442 0.28946 15 - -
1923 1.38629 1.38629 1.38629 1.38629
1924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1925 16 2.81865 0.23582 2.88868 2.35662 16 - -
1926 1.38629 1.38629 1.38629 1.38629
1927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1928 17 2.57915 2.25909 2.64442 0.28946 17 - -
1929 1.38629 1.38629 1.38629 1.38629
1930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1931 18 0.23862 2.84929 2.43386 2.70756 18 - -
1932 1.38629 1.38629 1.38629 1.38629
1933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1934 19 2.53331 3.02441 0.20344 2.88069 19 - -
1935 1.38629 1.38629 1.38629 1.38629
1936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1937 20 2.57915 2.25909 2.64442 0.28946 20 - -
1938 1.38629 1.38629 1.38629 1.38629
1939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1940 21 2.53331 3.02441 0.20344 2.88069 21 - -
1941 1.38629 1.38629 1.38629 1.38629
1942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1943 22 2.53331 3.02441 0.20344 2.88069 22 - -
1944 1.38629 1.38629 1.38629 1.38629
1945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1946 23 2.53331 3.02441 0.20344 2.88069 23 - -
1947 1.38629 1.38629 1.38629 1.38629
1948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1949 24 2.81865 0.23582 2.88868 2.35662 24 - -
1950 1.38629 1.38629 1.38629 1.38629
1951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1952 25 0.23862 2.84929 2.43386 2.70756 25 - -
1953 1.38629 1.38629 1.38629 1.38629
1954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1955 26 2.57915 2.25909 2.64442 0.28946 26 - -
1956 1.38629 1.38629 1.38629 1.38629
1957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1958 27 2.53331 3.02441 0.20344 2.88069 27 - -
1959 1.38629 1.38629 1.38629 1.38629
1960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1961 28 2.81865 0.23582 2.88868 2.35662 28 - -
1962 1.38629 1.38629 1.38629 1.38629
1963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1964 29 2.81865 0.23582 2.88868 2.35662 29 - -
1965 1.38629 1.38629 1.38629 1.38629
1966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1967 30 2.57915 2.25909 2.64442 0.28946 30 - -
1968 1.38629 1.38629 1.38629 1.38629
1969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1970 31 2.53331 3.02441 0.20344 2.88069 31 - -
1971 1.38629 1.38629 1.38629 1.38629
1972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1973 32 2.57915 2.25909 2.64442 0.28946 32 - -
1974 1.38629 1.38629 1.38629 1.38629
1975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1976 33 2.57915 2.25909 2.64442 0.28946 33 - -
1977 1.38629 1.38629 1.38629 1.38629
1978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1979 34 2.81865 0.23582 2.88868 2.35662 34 - -
1980 1.38629 1.38629 1.38629 1.38629
1981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1982 35 2.53331 3.02441 0.20344 2.88069 35 - -
1983 1.38629 1.38629 1.38629 1.38629
1984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1985 36 0.23862 2.84929 2.43386 2.70756 36 - -
1986 1.38629 1.38629 1.38629 1.38629
1987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1988 37 2.53331 3.02441 0.20344 2.88069 37 - -
1989 1.38629 1.38629 1.38629 1.38629
1990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1991 38 2.81865 0.23582 2.88868 2.35662 38 - -
1992 1.38629 1.38629 1.38629 1.38629
1993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1994 39 2.53331 3.02441 0.20344 2.88069 39 - -
1995 1.38629 1.38629 1.38629 1.38629
1996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1997 40 2.57915 2.25909 2.64442 0.28946 40 - -
1998 1.38629 1.38629 1.38629 1.38629
1999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2000 41 2.81865 0.23582 2.88868 2.35662 41 - -
2001 1.38629 1.38629 1.38629 1.38629
2002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2003 42 0.23862 2.84929 2.43386 2.70756 42 - -
2004 1.38629 1.38629 1.38629 1.38629
2005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2006 43 2.57915 2.25909 2.64442 0.28946 43 - -
2007 1.38629 1.38629 1.38629 1.38629
2008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2009 44 2.57915 2.25909 2.64442 0.28946 44 - -
2010 1.38629 1.38629 1.38629 1.38629
2011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2012 45 2.57915 2.25909 2.64442 0.28946 45 - -
2013 1.38629 1.38629 1.38629 1.38629
2014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2015 //
2016 HMMER3/b [3.0 | March 2010]
2017 NAME 3_End_Tracheophyta_58S_end_fortyoneb_long
2018 LENG 45
2019 ALPH DNA
2020 RF no
2021 CS no
2022 MAP yes
2023 DATE Sat Feb 18 01:12:38 2012
2024 NSEQ 2
2025 EFFN 2.000000
2026 CKSUM 3468270774
2027 STATS LOCAL MSV -7.4190 0.72801
2028 STATS LOCAL VITERBI -8.4353 0.72801
2029 STATS LOCAL FORWARD -3.5007 0.72801
2030 HMM A C G T
2031 m->m m->i m->d i->m i->i d->m d->d
2032 COMPO 1.92183 1.28078 1.22118 1.26956
2033 1.38629 1.38629 1.38629 1.38629
2034 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2035 1 2.57915 2.25909 2.64442 0.28946 1 - -
2036 1.38629 1.38629 1.38629 1.38629
2037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2038 2 2.57915 2.25909 2.64442 0.28946 2 - -
2039 1.38629 1.38629 1.38629 1.38629
2040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2041 3 2.53331 3.02441 0.20344 2.88069 3 - -
2042 1.38629 1.38629 1.38629 1.38629
2043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2044 4 2.81865 0.23582 2.88868 2.35662 4 - -
2045 1.38629 1.38629 1.38629 1.38629
2046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2047 5 2.53331 3.02441 0.20344 2.88069 5 - -
2048 1.38629 1.38629 1.38629 1.38629
2049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2050 6 2.81865 0.23582 2.88868 2.35662 6 - -
2051 1.38629 1.38629 1.38629 1.38629
2052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2053 7 2.81865 0.23582 2.88868 2.35662 7 - -
2054 1.38629 1.38629 1.38629 1.38629
2055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2056 8 2.81865 0.23582 2.88868 2.35662 8 - -
2057 1.38629 1.38629 1.38629 1.38629
2058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2059 9 2.57915 2.25909 2.64442 0.28946 9 - -
2060 1.38629 1.38629 1.38629 1.38629
2061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2062 10 2.53331 3.02441 0.20344 2.88069 10 - -
2063 1.38629 1.38629 1.38629 1.38629
2064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2065 11 2.53331 3.02441 0.20344 2.88069 11 - -
2066 1.38629 1.38629 1.38629 1.38629
2067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2068 12 2.57915 2.25909 2.64442 0.28946 12 - -
2069 1.38629 1.38629 1.38629 1.38629
2070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2071 13 0.23862 2.84929 2.43386 2.70756 13 - -
2072 1.38629 1.38629 1.38629 1.38629
2073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2074 14 2.57915 2.25909 2.64442 0.28946 14 - -
2075 1.38629 1.38629 1.38629 1.38629
2076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2077 15 2.57915 2.25909 2.64442 0.28946 15 - -
2078 1.38629 1.38629 1.38629 1.38629
2079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2080 16 2.81865 0.23582 2.88868 2.35662 16 - -
2081 1.38629 1.38629 1.38629 1.38629
2082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2083 17 2.81865 0.23582 2.88868 2.35662 17 - -
2084 1.38629 1.38629 1.38629 1.38629
2085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2086 18 2.53331 3.02441 0.20344 2.88069 18 - -
2087 1.38629 1.38629 1.38629 1.38629
2088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2089 19 2.81865 0.23582 2.88868 2.35662 19 - -
2090 1.38629 1.38629 1.38629 1.38629
2091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2092 20 2.53331 3.02441 0.20344 2.88069 20 - -
2093 1.38629 1.38629 1.38629 1.38629
2094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2095 21 2.53331 3.02441 0.20344 2.88069 21 - -
2096 1.38629 1.38629 1.38629 1.38629
2097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2098 22 2.53331 3.02441 0.20344 2.88069 22 - -
2099 1.38629 1.38629 1.38629 1.38629
2100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2101 23 2.53331 3.02441 0.20344 2.88069 23 - -
2102 1.38629 1.38629 1.38629 1.38629
2103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2104 24 2.81865 0.23582 2.88868 2.35662 24 - -
2105 1.38629 1.38629 1.38629 1.38629
2106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2107 25 0.23862 2.84929 2.43386 2.70756 25 - -
2108 1.38629 1.38629 1.38629 1.38629
2109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2110 26 2.57915 2.25909 2.64442 0.28946 26 - -
2111 1.38629 1.38629 1.38629 1.38629
2112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2113 27 2.53331 3.02441 0.20344 2.88069 27 - -
2114 1.38629 1.38629 1.38629 1.38629
2115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2116 28 2.81865 0.23582 2.88868 2.35662 28 - -
2117 1.38629 1.38629 1.38629 1.38629
2118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2119 29 2.81865 0.23582 2.88868 2.35662 29 - -
2120 1.38629 1.38629 1.38629 1.38629
2121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2122 30 2.57915 2.25909 2.64442 0.28946 30 - -
2123 1.38629 1.38629 1.38629 1.38629
2124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2125 31 2.53331 3.02441 0.20344 2.88069 31 - -
2126 1.38629 1.38629 1.38629 1.38629
2127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2128 32 2.57915 2.25909 2.64442 0.28946 32 - -
2129 1.38629 1.38629 1.38629 1.38629
2130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2131 33 2.57915 2.25909 2.64442 0.28946 33 - -
2132 1.38629 1.38629 1.38629 1.38629
2133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2134 34 2.81865 0.23582 2.88868 2.35662 34 - -
2135 1.38629 1.38629 1.38629 1.38629
2136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2137 35 2.53331 3.02441 0.20344 2.88069 35 - -
2138 1.38629 1.38629 1.38629 1.38629
2139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2140 36 0.23862 2.84929 2.43386 2.70756 36 - -
2141 1.38629 1.38629 1.38629 1.38629
2142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2143 37 2.53331 3.02441 0.20344 2.88069 37 - -
2144 1.38629 1.38629 1.38629 1.38629
2145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2146 38 2.81865 0.23582 2.88868 2.35662 38 - -
2147 1.38629 1.38629 1.38629 1.38629
2148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2149 39 2.53331 3.02441 0.20344 2.88069 39 - -
2150 1.38629 1.38629 1.38629 1.38629
2151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2152 40 2.57915 2.25909 2.64442 0.28946 40 - -
2153 1.38629 1.38629 1.38629 1.38629
2154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2155 41 2.81865 0.23582 2.88868 2.35662 41 - -
2156 1.38629 1.38629 1.38629 1.38629
2157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2158 42 0.23862 2.84929 2.43386 2.70756 42 - -
2159 1.38629 1.38629 1.38629 1.38629
2160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2161 43 2.57915 2.25909 2.64442 0.28946 43 - -
2162 1.38629 1.38629 1.38629 1.38629
2163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2164 44 2.57915 2.25909 2.64442 0.28946 44 - -
2165 1.38629 1.38629 1.38629 1.38629
2166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2167 45 2.57915 2.25909 2.64442 0.28946 45 - -
2168 1.38629 1.38629 1.38629 1.38629
2169 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2170 //
2171 HMMER3/b [3.0 | March 2010]
2172 NAME 3_End_Tracheophyta_58S_end_fortyonec_long
2173 LENG 45
2174 ALPH DNA
2175 RF no
2176 CS no
2177 MAP yes
2178 DATE Sat Feb 18 01:12:47 2012
2179 NSEQ 2
2180 EFFN 2.000000
2181 CKSUM 2958063581
2182 STATS LOCAL MSV -7.5700 0.72787
2183 STATS LOCAL VITERBI -8.2073 0.72787
2184 STATS LOCAL FORWARD -3.5550 0.72787
2185 HMM A C G T
2186 m->m m->i m->d i->m i->i d->m d->d
2187 COMPO 1.74595 1.23508 1.27185 1.36886
2188 1.38629 1.38629 1.38629 1.38629
2189 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2190 1 2.57915 2.25909 2.64442 0.28946 1 - -
2191 1.38629 1.38629 1.38629 1.38629
2192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2193 2 2.57915 2.25909 2.64442 0.28946 2 - -
2194 1.38629 1.38629 1.38629 1.38629
2195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2196 3 2.53331 3.02441 0.20344 2.88069 3 - -
2197 1.38629 1.38629 1.38629 1.38629
2198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2199 4 2.81865 0.23582 2.88868 2.35662 4 - -
2200 1.38629 1.38629 1.38629 1.38629
2201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2202 5 2.53331 3.02441 0.20344 2.88069 5 - -
2203 1.38629 1.38629 1.38629 1.38629
2204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2205 6 2.81865 0.23582 2.88868 2.35662 6 - -
2206 1.38629 1.38629 1.38629 1.38629
2207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2208 7 2.81865 0.23582 2.88868 2.35662 7 - -
2209 1.38629 1.38629 1.38629 1.38629
2210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2211 8 2.81865 0.23582 2.88868 2.35662 8 - -
2212 1.38629 1.38629 1.38629 1.38629
2213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2214 9 2.57915 2.25909 2.64442 0.28946 9 - -
2215 1.38629 1.38629 1.38629 1.38629
2216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2217 10 2.53331 3.02441 0.20344 2.88069 10 - -
2218 1.38629 1.38629 1.38629 1.38629
2219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2220 11 2.53331 3.02441 0.20344 2.88069 11 - -
2221 1.38629 1.38629 1.38629 1.38629
2222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2223 12 2.57915 2.25909 2.64442 0.28946 12 - -
2224 1.38629 1.38629 1.38629 1.38629
2225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2226 13 0.23862 2.84929 2.43386 2.70756 13 - -
2227 1.38629 1.38629 1.38629 1.38629
2228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2229 14 2.57915 2.25909 2.64442 0.28946 14 - -
2230 1.38629 1.38629 1.38629 1.38629
2231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2232 15 2.57915 2.25909 2.64442 0.28946 15 - -
2233 1.38629 1.38629 1.38629 1.38629
2234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2235 16 2.81865 0.23582 2.88868 2.35662 16 - -
2236 1.38629 1.38629 1.38629 1.38629
2237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2238 17 2.81865 0.23582 2.88868 2.35662 17 - -
2239 1.38629 1.38629 1.38629 1.38629
2240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2241 18 2.53331 3.02441 0.20344 2.88069 18 - -
2242 1.38629 1.38629 1.38629 1.38629
2243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2244 19 0.23862 2.84929 2.43386 2.70756 19 - -
2245 1.38629 1.38629 1.38629 1.38629
2246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2247 20 0.23862 2.84929 2.43386 2.70756 20 - -
2248 1.38629 1.38629 1.38629 1.38629
2249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2250 21 2.53331 3.02441 0.20344 2.88069 21 - -
2251 1.38629 1.38629 1.38629 1.38629
2252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2253 22 2.53331 3.02441 0.20344 2.88069 22 - -
2254 1.38629 1.38629 1.38629 1.38629
2255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2256 23 2.53331 3.02441 0.20344 2.88069 23 - -
2257 1.38629 1.38629 1.38629 1.38629
2258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2259 24 2.81865 0.23582 2.88868 2.35662 24 - -
2260 1.38629 1.38629 1.38629 1.38629
2261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2262 25 0.23862 2.84929 2.43386 2.70756 25 - -
2263 1.38629 1.38629 1.38629 1.38629
2264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2265 26 2.57915 2.25909 2.64442 0.28946 26 - -
2266 1.38629 1.38629 1.38629 1.38629
2267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2268 27 2.53331 3.02441 0.20344 2.88069 27 - -
2269 1.38629 1.38629 1.38629 1.38629
2270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2271 28 2.81865 0.23582 2.88868 2.35662 28 - -
2272 1.38629 1.38629 1.38629 1.38629
2273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2274 29 2.81865 0.23582 2.88868 2.35662 29 - -
2275 1.38629 1.38629 1.38629 1.38629
2276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2277 30 2.81865 0.23582 2.88868 2.35662 30 - -
2278 1.38629 1.38629 1.38629 1.38629
2279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2280 31 2.53331 3.02441 0.20344 2.88069 31 - -
2281 1.38629 1.38629 1.38629 1.38629
2282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2283 32 2.57915 2.25909 2.64442 0.28946 32 - -
2284 1.38629 1.38629 1.38629 1.38629
2285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2286 33 2.81865 0.23582 2.88868 2.35662 33 - -
2287 1.38629 1.38629 1.38629 1.38629
2288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2289 34 2.81865 0.23582 2.88868 2.35662 34 - -
2290 1.38629 1.38629 1.38629 1.38629
2291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2292 35 2.53331 3.02441 0.20344 2.88069 35 - -
2293 1.38629 1.38629 1.38629 1.38629
2294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2295 36 0.23862 2.84929 2.43386 2.70756 36 - -
2296 1.38629 1.38629 1.38629 1.38629
2297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2298 37 2.53331 3.02441 0.20344 2.88069 37 - -
2299 1.38629 1.38629 1.38629 1.38629
2300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2301 38 2.81865 0.23582 2.88868 2.35662 38 - -
2302 1.38629 1.38629 1.38629 1.38629
2303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2304 39 2.53331 3.02441 0.20344 2.88069 39 - -
2305 1.38629 1.38629 1.38629 1.38629
2306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2307 40 2.57915 2.25909 2.64442 0.28946 40 - -
2308 1.38629 1.38629 1.38629 1.38629
2309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2310 41 2.81865 0.23582 2.88868 2.35662 41 - -
2311 1.38629 1.38629 1.38629 1.38629
2312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2313 42 0.23862 2.84929 2.43386 2.70756 42 - -
2314 1.38629 1.38629 1.38629 1.38629
2315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2316 43 2.57915 2.25909 2.64442 0.28946 43 - -
2317 1.38629 1.38629 1.38629 1.38629
2318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2319 44 2.57915 2.25909 2.64442 0.28946 44 - -
2320 1.38629 1.38629 1.38629 1.38629
2321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2322 45 2.57915 2.25909 2.64442 0.28946 45 - -
2323 1.38629 1.38629 1.38629 1.38629
2324 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2325 //
2326 HMMER3/b [3.0 | March 2010]
2327 NAME 3_End_Tracheophyta_58S_end_fortyoned_long
2328 LENG 45
2329 ALPH DNA
2330 RF no
2331 CS no
2332 MAP yes
2333 DATE Sat Feb 18 01:12:59 2012
2334 NSEQ 3
2335 EFFN 3.000000
2336 CKSUM 2944176339
2337 STATS LOCAL MSV -8.0356 0.72024
2338 STATS LOCAL VITERBI -7.9811 0.72024
2339 STATS LOCAL FORWARD -3.7877 0.72024
2340 HMM A C G T
2341 m->m m->i m->d i->m i->i d->m d->d
2342 COMPO 2.03661 1.31928 1.14956 1.25377
2343 1.38629 1.38629 1.38629 1.38629
2344 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2345 1 2.97980 2.52563 3.03204 0.19727 1 - -
2346 1.38629 1.38629 1.38629 1.38629
2347 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2348 2 2.97980 2.52563 3.03204 0.19727 2 - -
2349 1.38629 1.38629 1.38629 1.38629
2350 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2351 3 2.86982 3.47591 0.13017 3.36931 3 - -
2352 1.38629 1.38629 1.38629 1.38629
2353 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2354 4 3.30705 0.14631 3.36166 2.73626 4 - -
2355 1.38629 1.38629 1.38629 1.38629
2356 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2357 5 2.86982 3.47591 0.13017 3.36931 5 - -
2358 1.38629 1.38629 1.38629 1.38629
2359 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2360 6 3.30705 0.14631 3.36166 2.73626 6 - -
2361 1.38629 1.38629 1.38629 1.38629
2362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2363 7 3.30705 0.14631 3.36166 2.73626 7 - -
2364 1.38629 1.38629 1.38629 1.38629
2365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2366 8 3.30705 0.14631 3.36166 2.73626 8 - -
2367 1.38629 1.38629 1.38629 1.38629
2368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2369 9 2.97980 2.52563 3.03204 0.19727 9 - -
2370 1.38629 1.38629 1.38629 1.38629
2371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2372 10 2.86982 3.47591 0.13017 3.36931 10 - -
2373 1.38629 1.38629 1.38629 1.38629
2374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2375 11 2.86982 3.47591 0.13017 3.36931 11 - -
2376 1.38629 1.38629 1.38629 1.38629
2377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2378 12 2.97980 2.52563 3.03204 0.19727 12 - -
2379 1.38629 1.38629 1.38629 1.38629
2380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2381 13 0.15719 3.27118 2.73043 3.16274 13 - -
2382 1.38629 1.38629 1.38629 1.38629
2383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2384 14 2.97980 2.52563 3.03204 0.19727 14 - -
2385 1.38629 1.38629 1.38629 1.38629
2386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2387 15 2.97980 2.52563 3.03204 0.19727 15 - -
2388 1.38629 1.38629 1.38629 1.38629
2389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2390 16 3.30705 0.14631 3.36166 2.73626 16 - -
2391 1.38629 1.38629 1.38629 1.38629
2392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2393 17 3.30705 0.14631 3.36166 2.73626 17 - -
2394 1.38629 1.38629 1.38629 1.38629
2395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2396 18 2.86982 3.47591 0.13017 3.36931 18 - -
2397 1.38629 1.38629 1.38629 1.38629
2398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2399 19 2.86982 3.47591 0.13017 3.36931 19 - -
2400 1.38629 1.38629 1.38629 1.38629
2401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2402 20 2.86982 3.47591 0.13017 3.36931 20 - -
2403 1.38629 1.38629 1.38629 1.38629
2404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2405 21 2.86982 3.47591 0.13017 3.36931 21 - -
2406 1.38629 1.38629 1.38629 1.38629
2407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2408 22 2.86982 3.47591 0.13017 3.36931 22 - -
2409 1.38629 1.38629 1.38629 1.38629
2410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2411 23 2.86982 3.47591 0.13017 3.36931 23 - -
2412 1.38629 1.38629 1.38629 1.38629
2413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2414 24 3.30705 0.14631 3.36166 2.73626 24 - -
2415 1.38629 1.38629 1.38629 1.38629
2416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2417 25 0.15719 3.27118 2.73043 3.16274 25 - -
2418 1.38629 1.38629 1.38629 1.38629
2419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2420 26 2.97980 2.52563 3.03204 0.19727 26 - -
2421 1.38629 1.38629 1.38629 1.38629
2422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2423 27 2.86982 3.47591 0.13017 3.36931 27 - -
2424 1.38629 1.38629 1.38629 1.38629
2425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2426 28 3.30705 0.14631 3.36166 2.73626 28 - -
2427 1.38629 1.38629 1.38629 1.38629
2428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2429 29 3.30705 0.14631 3.36166 2.73626 29 - -
2430 1.38629 1.38629 1.38629 1.38629
2431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2432 30 2.97980 2.52563 3.03204 0.19727 30 - -
2433 1.38629 1.38629 1.38629 1.38629
2434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2435 31 2.86982 3.47591 0.13017 3.36931 31 - -
2436 1.38629 1.38629 1.38629 1.38629
2437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2438 32 2.97980 2.52563 3.03204 0.19727 32 - -
2439 1.38629 1.38629 1.38629 1.38629
2440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2441 33 2.97980 2.52563 3.03204 0.19727 33 - -
2442 1.38629 1.38629 1.38629 1.38629
2443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2444 34 3.30705 0.14631 3.36166 2.73626 34 - -
2445 1.38629 1.38629 1.38629 1.38629
2446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2447 35 2.86982 3.47591 0.13017 3.36931 35 - -
2448 1.38629 1.38629 1.38629 1.38629
2449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2450 36 0.15719 3.27118 2.73043 3.16274 36 - -
2451 1.38629 1.38629 1.38629 1.38629
2452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2453 37 2.86982 3.47591 0.13017 3.36931 37 - -
2454 1.38629 1.38629 1.38629 1.38629
2455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2456 38 3.30705 0.14631 3.36166 2.73626 38 - -
2457 1.38629 1.38629 1.38629 1.38629
2458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2459 39 2.86982 3.47591 0.13017 3.36931 39 - -
2460 1.38629 1.38629 1.38629 1.38629
2461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2462 40 2.97980 2.52563 3.03204 0.19727 40 - -
2463 1.38629 1.38629 1.38629 1.38629
2464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2465 41 3.30705 0.14631 3.36166 2.73626 41 - -
2466 1.38629 1.38629 1.38629 1.38629
2467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2468 42 0.15719 3.27118 2.73043 3.16274 42 - -
2469 1.38629 1.38629 1.38629 1.38629
2470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2471 43 2.97980 2.52563 3.03204 0.19727 43 - -
2472 1.38629 1.38629 1.38629 1.38629
2473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2474 44 2.97980 2.52563 3.03204 0.19727 44 - -
2475 1.38629 1.38629 1.38629 1.38629
2476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2477 45 2.97980 2.52563 3.03204 0.19727 45 - -
2478 1.38629 1.38629 1.38629 1.38629
2479 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
2480 //
2481 HMMER3/b [3.0 | March 2010]
2482 NAME 3_End_Tracheophyta_58S_end_fortythreea_long
2483 LENG 45
2484 ALPH DNA
2485 RF no
2486 CS no
2487 MAP yes
2488 DATE Sat Feb 18 01:13:31 2012
2489 NSEQ 3
2490 EFFN 3.000000
2491 CKSUM 545963122
2492 STATS LOCAL MSV -8.1058 0.72013
2493 STATS LOCAL VITERBI -7.7231 0.72013
2494 STATS LOCAL FORWARD -3.7699 0.72013
2495 HMM A C G T
2496 m->m m->i m->d i->m i->i d->m d->d
2497 COMPO 1.63845 1.05232 1.46071 1.49377
2498 1.38629 1.38629 1.38629 1.38629
2499 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2500 1 2.97980 2.52563 3.03204 0.19727 1 - -
2501 1.38629 1.38629 1.38629 1.38629
2502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2503 2 2.86982 3.47591 0.13017 3.36931 2 - -
2504 1.38629 1.38629 1.38629 1.38629
2505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2506 3 3.30705 0.14631 3.36166 2.73626 3 - -
2507 1.38629 1.38629 1.38629 1.38629
2508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2509 4 0.15719 3.27118 2.73043 3.16274 4 - -
2510 1.38629 1.38629 1.38629 1.38629
2511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2512 5 3.30705 0.14631 3.36166 2.73626 5 - -
2513 1.38629 1.38629 1.38629 1.38629
2514 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2515 6 3.30705 0.14631 3.36166 2.73626 6 - -
2516 1.38629 1.38629 1.38629 1.38629
2517 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2518 7 3.30705 0.14631 3.36166 2.73626 7 - -
2519 1.38629 1.38629 1.38629 1.38629
2520 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2521 8 0.15719 3.27118 2.73043 3.16274 8 - -
2522 1.38629 1.38629 1.38629 1.38629
2523 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2524 9 2.97980 2.52563 3.03204 0.19727 9 - -
2525 1.38629 1.38629 1.38629 1.38629
2526 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2527 10 2.86982 3.47591 0.13017 3.36931 10 - -
2528 1.38629 1.38629 1.38629 1.38629
2529 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2530 11 2.86982 3.47591 0.13017 3.36931 11 - -
2531 1.38629 1.38629 1.38629 1.38629
2532 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2533 12 3.30705 0.14631 3.36166 2.73626 12 - -
2534 1.38629 1.38629 1.38629 1.38629
2535 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2536 13 2.97980 2.52563 3.03204 0.19727 13 - -
2537 1.38629 1.38629 1.38629 1.38629
2538 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2539 14 3.30705 0.14631 3.36166 2.73626 14 - -
2540 1.38629 1.38629 1.38629 1.38629
2541 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2542 15 2.86982 3.47591 0.13017 3.36931 15 - -
2543 1.38629 1.38629 1.38629 1.38629
2544 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2545 16 2.97980 2.52563 3.03204 0.19727 16 - -
2546 1.38629 1.38629 1.38629 1.38629
2547 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2548 17 2.97980 2.52563 3.03204 0.19727 17 - -
2549 1.38629 1.38629 1.38629 1.38629
2550 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2551 18 3.30705 0.14631 3.36166 2.73626 18 - -
2552 1.38629 1.38629 1.38629 1.38629
2553 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2554 19 0.15719 3.27118 2.73043 3.16274 19 - -
2555 1.38629 1.38629 1.38629 1.38629
2556 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2557 20 0.15719 3.27118 2.73043 3.16274 20 - -
2558 1.38629 1.38629 1.38629 1.38629
2559 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2560 21 2.86982 3.47591 0.13017 3.36931 21 - -
2561 1.38629 1.38629 1.38629 1.38629
2562 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2563 22 2.86982 3.47591 0.13017 3.36931 22 - -
2564 1.38629 1.38629 1.38629 1.38629
2565 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2566 23 2.86982 3.47591 0.13017 3.36931 23 - -
2567 1.38629 1.38629 1.38629 1.38629
2568 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2569 24 3.30705 0.14631 3.36166 2.73626 24 - -
2570 1.38629 1.38629 1.38629 1.38629
2571 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2572 25 0.15719 3.27118 2.73043 3.16274 25 - -
2573 1.38629 1.38629 1.38629 1.38629
2574 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2575 26 2.97980 2.52563 3.03204 0.19727 26 - -
2576 1.38629 1.38629 1.38629 1.38629
2577 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2578 27 2.86982 3.47591 0.13017 3.36931 27 - -
2579 1.38629 1.38629 1.38629 1.38629
2580 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2581 28 3.30705 0.14631 3.36166 2.73626 28 - -
2582 1.38629 1.38629 1.38629 1.38629
2583 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2584 29 3.30705 0.14631 3.36166 2.73626 29 - -
2585 1.38629 1.38629 1.38629 1.38629
2586 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2587 30 2.97980 2.52563 3.03204 0.19727 30 - -
2588 1.38629 1.38629 1.38629 1.38629
2589 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2590 31 2.97980 2.52563 3.03204 0.19727 31 - -
2591 1.38629 1.38629 1.38629 1.38629
2592 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2593 32 3.30705 0.14631 3.36166 2.73626 32 - -
2594 1.38629 1.38629 1.38629 1.38629
2595 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2596 33 3.30705 0.14631 3.36166 2.73626 33 - -
2597 1.38629 1.38629 1.38629 1.38629
2598 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2599 34 2.97980 2.52563 3.03204 0.19727 34 - -
2600 1.38629 1.38629 1.38629 1.38629
2601 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2602 35 0.15719 3.27118 2.73043 3.16274 35 - -
2603 1.38629 1.38629 1.38629 1.38629
2604 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2605 36 0.15719 3.27118 2.73043 3.16274 36 - -
2606 1.38629 1.38629 1.38629 1.38629
2607 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2608 37 2.86982 3.47591 0.13017 3.36931 37 - -
2609 1.38629 1.38629 1.38629 1.38629
2610 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2611 38 3.30705 0.14631 3.36166 2.73626 38 - -
2612 1.38629 1.38629 1.38629 1.38629
2613 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2614 39 0.15719 3.27118 2.73043 3.16274 39 - -
2615 1.38629 1.38629 1.38629 1.38629
2616 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2617 40 2.97980 2.52563 3.03204 0.19727 40 - -
2618 1.38629 1.38629 1.38629 1.38629
2619 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2620 41 3.30705 0.14631 3.36166 2.73626 41 - -
2621 1.38629 1.38629 1.38629 1.38629
2622 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2623 42 3.30705 0.14631 3.36166 2.73626 42 - -
2624 1.38629 1.38629 1.38629 1.38629
2625 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2626 43 3.30705 0.14631 3.36166 2.73626 43 - -
2627 1.38629 1.38629 1.38629 1.38629
2628 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2629 44 3.30705 0.14631 3.36166 2.73626 44 - -
2630 1.38629 1.38629 1.38629 1.38629
2631 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2632 45 2.86982 3.47591 0.13017 3.36931 45 - -
2633 1.38629 1.38629 1.38629 1.38629
2634 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
2635 //
2636 HMMER3/b [3.0 | March 2010]
2637 NAME 3_End_Tracheophyta_58S_end_fortythreec_long
2638 LENG 45
2639 ALPH DNA
2640 RF no
2641 CS no
2642 MAP yes
2643 DATE Sat Feb 18 01:13:42 2012
2644 NSEQ 4
2645 EFFN 3.152344
2646 CKSUM 2383999962
2647 STATS LOCAL MSV -7.9404 0.71933
2648 STATS LOCAL VITERBI -7.6097 0.71933
2649 STATS LOCAL FORWARD -3.9794 0.71933
2650 HMM A C G T
2651 m->m m->i m->d i->m i->i d->m d->d
2652 COMPO 1.92616 1.32798 1.04338 1.43961
2653 1.38629 1.38629 1.38629 1.38629
2654 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 *
2655 1 3.03232 2.55926 3.08260 0.18802 1 - -
2656 1.38629 1.38629 1.38629 1.38629
2657 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2658 2 2.90797 3.53050 0.12362 3.42932 2 - -
2659 1.38629 1.38629 1.38629 1.38629
2660 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2661 3 3.36834 0.13821 3.42049 2.78160 3 - -
2662 1.38629 1.38629 1.38629 1.38629
2663 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2664 4 2.90797 3.53050 0.12362 3.42932 4 - -
2665 1.38629 1.38629 1.38629 1.38629
2666 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2667 5 3.36834 0.13821 3.42049 2.78160 5 - -
2668 1.38629 1.38629 1.38629 1.38629
2669 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2670 6 3.36834 0.13821 3.42049 2.78160 6 - -
2671 1.38629 1.38629 1.38629 1.38629
2672 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2673 7 3.36834 0.13821 3.42049 2.78160 7 - -
2674 1.38629 1.38629 1.38629 1.38629
2675 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2676 8 2.90797 3.53050 0.12362 3.42932 8 - -
2677 1.38629 1.38629 1.38629 1.38629
2678 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2679 9 2.90797 3.53050 0.12362 3.42932 9 - -
2680 1.38629 1.38629 1.38629 1.38629
2681 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2682 10 2.90797 3.53050 0.12362 3.42932 10 - -
2683 1.38629 1.38629 1.38629 1.38629
2684 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2685 11 2.90797 3.53050 0.12362 3.42932 11 - -
2686 1.38629 1.38629 1.38629 1.38629
2687 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2688 12 3.36834 0.13821 3.42049 2.78160 12 - -
2689 1.38629 1.38629 1.38629 1.38629
2690 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2691 13 3.03232 2.55926 3.08260 0.18802 13 - -
2692 1.38629 1.38629 1.38629 1.38629
2693 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2694 14 3.03232 2.55926 3.08260 0.18802 14 - -
2695 1.38629 1.38629 1.38629 1.38629
2696 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2697 15 2.90797 3.53050 0.12362 3.42932 15 - -
2698 1.38629 1.38629 1.38629 1.38629
2699 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2700 16 3.03232 2.55926 3.08260 0.18802 16 - -
2701 1.38629 1.38629 1.38629 1.38629
2702 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2703 17 3.36834 0.13821 3.42049 2.78160 17 - -
2704 1.38629 1.38629 1.38629 1.38629
2705 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2706 18 3.36834 0.13821 3.42049 2.78160 18 - -
2707 1.38629 1.38629 1.38629 1.38629
2708 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2709 19 2.90797 3.53050 0.12362 3.42932 19 - -
2710 1.38629 1.38629 1.38629 1.38629
2711 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2712 20 0.14954 3.32415 2.76532 3.22056 20 - -
2713 1.38629 1.38629 1.38629 1.38629
2714 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2715 21 2.90797 3.53050 0.12362 3.42932 21 - -
2716 1.38629 1.38629 1.38629 1.38629
2717 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2718 22 2.90797 3.53050 0.12362 3.42932 22 - -
2719 1.38629 1.38629 1.38629 1.38629
2720 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2721 23 2.90797 3.53050 0.12362 3.42932 23 - -
2722 1.38629 1.38629 1.38629 1.38629
2723 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2724 24 3.36834 0.13821 3.42049 2.78160 24 - -
2725 1.38629 1.38629 1.38629 1.38629
2726 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2727 25 0.14954 3.32415 2.76532 3.22056 25 - -
2728 1.38629 1.38629 1.38629 1.38629
2729 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2730 26 3.03232 2.55926 3.08260 0.18802 26 - -
2731 1.38629 1.38629 1.38629 1.38629
2732 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2733 27 2.90797 3.53050 0.12362 3.42932 27 - -
2734 1.38629 1.38629 1.38629 1.38629
2735 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2736 28 3.03232 2.55926 3.08260 0.18802 28 - -
2737 1.38629 1.38629 1.38629 1.38629
2738 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2739 29 3.36834 0.13821 3.42049 2.78160 29 - -
2740 1.38629 1.38629 1.38629 1.38629
2741 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2742 30 3.03232 2.55926 3.08260 0.18802 30 - -
2743 1.38629 1.38629 1.38629 1.38629
2744 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2745 31 2.90797 3.53050 0.12362 3.42932 31 - -
2746 1.38629 1.38629 1.38629 1.38629
2747 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2748 32 2.90797 3.53050 0.12362 3.42932 32 - -
2749 1.38629 1.38629 1.38629 1.38629
2750 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2751 33 3.36834 0.13821 3.42049 2.78160 33 - -
2752 1.38629 1.38629 1.38629 1.38629
2753 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2754 34 3.03232 2.55926 3.08260 0.18802 34 - -
2755 1.38629 1.38629 1.38629 1.38629
2756 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2757 35 2.90797 3.53050 0.12362 3.42932 35 - -
2758 1.38629 1.38629 1.38629 1.38629
2759 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2760 36 0.14954 3.32415 2.76532 3.22056 36 - -
2761 1.38629 1.38629 1.38629 1.38629
2762 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2763 37 2.90797 3.53050 0.12362 3.42932 37 - -
2764 1.38629 1.38629 1.38629 1.38629
2765 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2766 38 3.36834 0.13821 3.42049 2.78160 38 - -
2767 1.38629 1.38629 1.38629 1.38629
2768 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2769 39 2.90797 3.53050 0.12362 3.42932 39 - -
2770 1.38629 1.38629 1.38629 1.38629
2771 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2772 40 3.03232 2.55926 3.08260 0.18802 40 - -
2773 1.38629 1.38629 1.38629 1.38629
2774 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2775 41 3.36834 0.13821 3.42049 2.78160 41 - -
2776 1.38629 1.38629 1.38629 1.38629
2777 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2778 42 3.03232 2.55926 3.08260 0.18802 42 - -
2779 1.38629 1.38629 1.38629 1.38629
2780 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2781 43 0.14954 3.32415 2.76532 3.22056 43 - -
2782 1.38629 1.38629 1.38629 1.38629
2783 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2784 44 0.14954 3.32415 2.76532 3.22056 44 - -
2785 1.38629 1.38629 1.38629 1.38629
2786 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
2787 45 3.03232 2.55926 3.08260 0.18802 45 - -
2788 1.38629 1.38629 1.38629 1.38629
2789 0.01922 3.96126 * 1.46634 0.26236 0.00000 *
2790 //
2791 HMMER3/b [3.0 | March 2010]
2792 NAME 3_End_Tracheophyta_58S_end_fortythreed_long
2793 LENG 45
2794 ALPH DNA
2795 RF no
2796 CS no
2797 MAP yes
2798 DATE Sat Feb 18 01:13:51 2012
2799 NSEQ 4
2800 EFFN 3.128906
2801 CKSUM 3164554758
2802 STATS LOCAL MSV -8.3104 0.71931
2803 STATS LOCAL VITERBI -7.6805 0.71931
2804 STATS LOCAL FORWARD -3.6350 0.71931
2805 HMM A C G T
2806 m->m m->i m->d i->m i->i d->m d->d
2807 COMPO 2.06183 1.00496 1.20814 1.57038
2808 1.38629 1.38629 1.38629 1.38629
2809 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
2810 1 3.02437 2.55419 3.07496 0.18939 1 - -
2811 1.38629 1.38629 1.38629 1.38629
2812 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2813 2 2.90228 3.52232 0.12458 3.42031 2 - -
2814 1.38629 1.38629 1.38629 1.38629
2815 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2816 3 3.35912 0.13939 3.41165 2.77481 3 - -
2817 1.38629 1.38629 1.38629 1.38629
2818 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2819 4 2.90228 3.52232 0.12458 3.42031 4 - -
2820 1.38629 1.38629 1.38629 1.38629
2821 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2822 5 3.35912 0.13939 3.41165 2.77481 5 - -
2823 1.38629 1.38629 1.38629 1.38629
2824 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2825 6 3.35912 0.13939 3.41165 2.77481 6 - -
2826 1.38629 1.38629 1.38629 1.38629
2827 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2828 7 3.35912 0.13939 3.41165 2.77481 7 - -
2829 1.38629 1.38629 1.38629 1.38629
2830 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2831 8 2.90228 3.52232 0.12458 3.42031 8 - -
2832 1.38629 1.38629 1.38629 1.38629
2833 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2834 9 3.35912 0.13939 3.41165 2.77481 9 - -
2835 1.38629 1.38629 1.38629 1.38629
2836 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2837 10 2.90228 3.52232 0.12458 3.42031 10 - -
2838 1.38629 1.38629 1.38629 1.38629
2839 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2840 11 2.90228 3.52232 0.12458 3.42031 11 - -
2841 1.38629 1.38629 1.38629 1.38629
2842 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2843 12 3.35912 0.13939 3.41165 2.77481 12 - -
2844 1.38629 1.38629 1.38629 1.38629
2845 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2846 13 3.02437 2.55419 3.07496 0.18939 13 - -
2847 1.38629 1.38629 1.38629 1.38629
2848 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2849 14 3.02437 2.55419 3.07496 0.18939 14 - -
2850 1.38629 1.38629 1.38629 1.38629
2851 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2852 15 2.90228 3.52232 0.12458 3.42031 15 - -
2853 1.38629 1.38629 1.38629 1.38629
2854 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2855 16 3.02437 2.55419 3.07496 0.18939 16 - -
2856 1.38629 1.38629 1.38629 1.38629
2857 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2858 17 3.35912 0.13939 3.41165 2.77481 17 - -
2859 1.38629 1.38629 1.38629 1.38629
2860 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2861 18 3.35912 0.13939 3.41165 2.77481 18 - -
2862 1.38629 1.38629 1.38629 1.38629
2863 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2864 19 0.15066 3.31617 2.76009 3.21184 19 - -
2865 1.38629 1.38629 1.38629 1.38629
2866 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2867 20 0.15066 3.31617 2.76009 3.21184 20 - -
2868 1.38629 1.38629 1.38629 1.38629
2869 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2870 21 2.90228 3.52232 0.12458 3.42031 21 - -
2871 1.38629 1.38629 1.38629 1.38629
2872 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2873 22 2.90228 3.52232 0.12458 3.42031 22 - -
2874 1.38629 1.38629 1.38629 1.38629
2875 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2876 23 2.90228 3.52232 0.12458 3.42031 23 - -
2877 1.38629 1.38629 1.38629 1.38629
2878 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2879 24 3.35912 0.13939 3.41165 2.77481 24 - -
2880 1.38629 1.38629 1.38629 1.38629
2881 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2882 25 0.15066 3.31617 2.76009 3.21184 25 - -
2883 1.38629 1.38629 1.38629 1.38629
2884 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2885 26 3.02437 2.55419 3.07496 0.18939 26 - -
2886 1.38629 1.38629 1.38629 1.38629
2887 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2888 27 2.90228 3.52232 0.12458 3.42031 27 - -
2889 1.38629 1.38629 1.38629 1.38629
2890 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2891 28 3.35912 0.13939 3.41165 2.77481 28 - -
2892 1.38629 1.38629 1.38629 1.38629
2893 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2894 29 3.35912 0.13939 3.41165 2.77481 29 - -
2895 1.38629 1.38629 1.38629 1.38629
2896 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2897 30 3.02437 2.55419 3.07496 0.18939 30 - -
2898 1.38629 1.38629 1.38629 1.38629
2899 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2900 31 3.02437 2.55419 3.07496 0.18939 31 - -
2901 1.38629 1.38629 1.38629 1.38629
2902 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2903 32 3.35912 0.13939 3.41165 2.77481 32 - -
2904 1.38629 1.38629 1.38629 1.38629
2905 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2906 33 3.35912 0.13939 3.41165 2.77481 33 - -
2907 1.38629 1.38629 1.38629 1.38629
2908 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2909 34 3.02437 2.55419 3.07496 0.18939 34 - -
2910 1.38629 1.38629 1.38629 1.38629
2911 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2912 35 2.90228 3.52232 0.12458 3.42031 35 - -
2913 1.38629 1.38629 1.38629 1.38629
2914 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2915 36 0.15066 3.31617 2.76009 3.21184 36 - -
2916 1.38629 1.38629 1.38629 1.38629
2917 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2918 37 2.90228 3.52232 0.12458 3.42031 37 - -
2919 1.38629 1.38629 1.38629 1.38629
2920 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2921 38 3.35912 0.13939 3.41165 2.77481 38 - -
2922 1.38629 1.38629 1.38629 1.38629
2923 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2924 39 2.90228 3.52232 0.12458 3.42031 39 - -
2925 1.38629 1.38629 1.38629 1.38629
2926 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2927 40 3.02437 2.55419 3.07496 0.18939 40 - -
2928 1.38629 1.38629 1.38629 1.38629
2929 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2930 41 3.35912 0.13939 3.41165 2.77481 41 - -
2931 1.38629 1.38629 1.38629 1.38629
2932 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2933 42 3.35912 0.13939 3.41165 2.77481 42 - -
2934 1.38629 1.38629 1.38629 1.38629
2935 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2936 43 3.35912 0.13939 3.41165 2.77481 43 - -
2937 1.38629 1.38629 1.38629 1.38629
2938 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2939 44 3.35912 0.13939 3.41165 2.77481 44 - -
2940 1.38629 1.38629 1.38629 1.38629
2941 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2942 45 2.90228 3.52232 0.12458 3.42031 45 - -
2943 1.38629 1.38629 1.38629 1.38629
2944 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
2945 //
2946 HMMER3/b [3.0 | March 2010]
2947 NAME 3_End_Tracheophyta_58S_end_fortythreee_long
2948 LENG 45
2949 ALPH DNA
2950 RF no
2951 CS no
2952 MAP yes
2953 DATE Sat Feb 18 01:14:00 2012
2954 NSEQ 2
2955 EFFN 2.000000
2956 CKSUM 4293616081
2957 STATS LOCAL MSV -7.4799 0.72798
2958 STATS LOCAL VITERBI -8.1984 0.72798
2959 STATS LOCAL FORWARD -3.3468 0.72798
2960 HMM A C G T
2961 m->m m->i m->d i->m i->i d->m d->d
2962 COMPO 1.83129 1.23142 1.27214 1.31795
2963 1.38629 1.38629 1.38629 1.38629
2964 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2965 1 2.57915 2.25909 2.64442 0.28946 1 - -
2966 1.38629 1.38629 1.38629 1.38629
2967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2968 2 2.53331 3.02441 0.20344 2.88069 2 - -
2969 1.38629 1.38629 1.38629 1.38629
2970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2971 3 2.81865 0.23582 2.88868 2.35662 3 - -
2972 1.38629 1.38629 1.38629 1.38629
2973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2974 4 2.53331 3.02441 0.20344 2.88069 4 - -
2975 1.38629 1.38629 1.38629 1.38629
2976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2977 5 2.81865 0.23582 2.88868 2.35662 5 - -
2978 1.38629 1.38629 1.38629 1.38629
2979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2980 6 2.81865 0.23582 2.88868 2.35662 6 - -
2981 1.38629 1.38629 1.38629 1.38629
2982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2983 7 2.57915 2.25909 2.64442 0.28946 7 - -
2984 1.38629 1.38629 1.38629 1.38629
2985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2986 8 2.53331 3.02441 0.20344 2.88069 8 - -
2987 1.38629 1.38629 1.38629 1.38629
2988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2989 9 2.81865 0.23582 2.88868 2.35662 9 - -
2990 1.38629 1.38629 1.38629 1.38629
2991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2992 10 2.53331 3.02441 0.20344 2.88069 10 - -
2993 1.38629 1.38629 1.38629 1.38629
2994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2995 11 2.53331 3.02441 0.20344 2.88069 11 - -
2996 1.38629 1.38629 1.38629 1.38629
2997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2998 12 2.81865 0.23582 2.88868 2.35662 12 - -
2999 1.38629 1.38629 1.38629 1.38629
3000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3001 13 2.57915 2.25909 2.64442 0.28946 13 - -
3002 1.38629 1.38629 1.38629 1.38629
3003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3004 14 2.81865 0.23582 2.88868 2.35662 14 - -
3005 1.38629 1.38629 1.38629 1.38629
3006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3007 15 2.53331 3.02441 0.20344 2.88069 15 - -
3008 1.38629 1.38629 1.38629 1.38629
3009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3010 16 2.57915 2.25909 2.64442 0.28946 16 - -
3011 1.38629 1.38629 1.38629 1.38629
3012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3013 17 2.81865 0.23582 2.88868 2.35662 17 - -
3014 1.38629 1.38629 1.38629 1.38629
3015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3016 18 2.81865 0.23582 2.88868 2.35662 18 - -
3017 1.38629 1.38629 1.38629 1.38629
3018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3019 19 0.23862 2.84929 2.43386 2.70756 19 - -
3020 1.38629 1.38629 1.38629 1.38629
3021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3022 20 0.23862 2.84929 2.43386 2.70756 20 - -
3023 1.38629 1.38629 1.38629 1.38629
3024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3025 21 2.53331 3.02441 0.20344 2.88069 21 - -
3026 1.38629 1.38629 1.38629 1.38629
3027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3028 22 2.53331 3.02441 0.20344 2.88069 22 - -
3029 1.38629 1.38629 1.38629 1.38629
3030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3031 23 2.57915 2.25909 2.64442 0.28946 23 - -
3032 1.38629 1.38629 1.38629 1.38629
3033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3034 24 2.57915 2.25909 2.64442 0.28946 24 - -
3035 1.38629 1.38629 1.38629 1.38629
3036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3037 25 0.23862 2.84929 2.43386 2.70756 25 - -
3038 1.38629 1.38629 1.38629 1.38629
3039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3040 26 2.57915 2.25909 2.64442 0.28946 26 - -
3041 1.38629 1.38629 1.38629 1.38629
3042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3043 27 2.53331 3.02441 0.20344 2.88069 27 - -
3044 1.38629 1.38629 1.38629 1.38629
3045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3046 28 2.81865 0.23582 2.88868 2.35662 28 - -
3047 1.38629 1.38629 1.38629 1.38629
3048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3049 29 2.81865 0.23582 2.88868 2.35662 29 - -
3050 1.38629 1.38629 1.38629 1.38629
3051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3052 30 2.57915 2.25909 2.64442 0.28946 30 - -
3053 1.38629 1.38629 1.38629 1.38629
3054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3055 31 2.57915 2.25909 2.64442 0.28946 31 - -
3056 1.38629 1.38629 1.38629 1.38629
3057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3058 32 2.81865 0.23582 2.88868 2.35662 32 - -
3059 1.38629 1.38629 1.38629 1.38629
3060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3061 33 2.81865 0.23582 2.88868 2.35662 33 - -
3062 1.38629 1.38629 1.38629 1.38629
3063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3064 34 2.57915 2.25909 2.64442 0.28946 34 - -
3065 1.38629 1.38629 1.38629 1.38629
3066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3067 35 2.53331 3.02441 0.20344 2.88069 35 - -
3068 1.38629 1.38629 1.38629 1.38629
3069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3070 36 0.23862 2.84929 2.43386 2.70756 36 - -
3071 1.38629 1.38629 1.38629 1.38629
3072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3073 37 2.53331 3.02441 0.20344 2.88069 37 - -
3074 1.38629 1.38629 1.38629 1.38629
3075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3076 38 2.57915 2.25909 2.64442 0.28946 38 - -
3077 1.38629 1.38629 1.38629 1.38629
3078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3079 39 2.53331 3.02441 0.20344 2.88069 39 - -
3080 1.38629 1.38629 1.38629 1.38629
3081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3082 40 2.57915 2.25909 2.64442 0.28946 40 - -
3083 1.38629 1.38629 1.38629 1.38629
3084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3085 41 2.81865 0.23582 2.88868 2.35662 41 - -
3086 1.38629 1.38629 1.38629 1.38629
3087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3088 42 2.81865 0.23582 2.88868 2.35662 42 - -
3089 1.38629 1.38629 1.38629 1.38629
3090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3091 43 0.23862 2.84929 2.43386 2.70756 43 - -
3092 1.38629 1.38629 1.38629 1.38629
3093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3094 44 2.57915 2.25909 2.64442 0.28946 44 - -
3095 1.38629 1.38629 1.38629 1.38629
3096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3097 45 2.53331 3.02441 0.20344 2.88069 45 - -
3098 1.38629 1.38629 1.38629 1.38629
3099 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3100 //
3101 HMMER3/b [3.0 | March 2010]
3102 NAME 3_End_Tracheophyta_58S_end_fortythreef_long
3103 LENG 45
3104 ALPH DNA
3105 RF no
3106 CS no
3107 MAP yes
3108 DATE Sat Feb 18 01:14:09 2012
3109 NSEQ 2
3110 EFFN 2.000000
3111 CKSUM 763339787
3112 STATS LOCAL MSV -7.5094 0.72740
3113 STATS LOCAL VITERBI -8.2548 0.72740
3114 STATS LOCAL FORWARD -2.9788 0.72740
3115 HMM A C G T
3116 m->m m->i m->d i->m i->i d->m d->d
3117 COMPO 1.84146 1.01995 1.27767 1.59892
3118 1.38629 1.38629 1.38629 1.38629
3119 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3120 1 2.57915 2.25909 2.64442 0.28946 1 - -
3121 1.38629 1.38629 1.38629 1.38629
3122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3123 2 2.53331 3.02441 0.20344 2.88069 2 - -
3124 1.38629 1.38629 1.38629 1.38629
3125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3126 3 2.81865 0.23582 2.88868 2.35662 3 - -
3127 1.38629 1.38629 1.38629 1.38629
3128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3129 4 2.53331 3.02441 0.20344 2.88069 4 - -
3130 1.38629 1.38629 1.38629 1.38629
3131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3132 5 2.81865 0.23582 2.88868 2.35662 5 - -
3133 1.38629 1.38629 1.38629 1.38629
3134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3135 6 2.81865 0.23582 2.88868 2.35662 6 - -
3136 1.38629 1.38629 1.38629 1.38629
3137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3138 7 2.81865 0.23582 2.88868 2.35662 7 - -
3139 1.38629 1.38629 1.38629 1.38629
3140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3141 8 2.53331 3.02441 0.20344 2.88069 8 - -
3142 1.38629 1.38629 1.38629 1.38629
3143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3144 9 2.81865 0.23582 2.88868 2.35662 9 - -
3145 1.38629 1.38629 1.38629 1.38629
3146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3147 10 2.53331 3.02441 0.20344 2.88069 10 - -
3148 1.38629 1.38629 1.38629 1.38629
3149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3150 11 2.53331 3.02441 0.20344 2.88069 11 - -
3151 1.38629 1.38629 1.38629 1.38629
3152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3153 12 2.81865 0.23582 2.88868 2.35662 12 - -
3154 1.38629 1.38629 1.38629 1.38629
3155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3156 13 2.57915 2.25909 2.64442 0.28946 13 - -
3157 1.38629 1.38629 1.38629 1.38629
3158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3159 14 2.81865 0.23582 2.88868 2.35662 14 - -
3160 1.38629 1.38629 1.38629 1.38629
3161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3162 15 2.53331 3.02441 0.20344 2.88069 15 - -
3163 1.38629 1.38629 1.38629 1.38629
3164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3165 16 2.57915 2.25909 2.64442 0.28946 16 - -
3166 1.38629 1.38629 1.38629 1.38629
3167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3168 17 2.81865 0.23582 2.88868 2.35662 17 - -
3169 1.38629 1.38629 1.38629 1.38629
3170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3171 18 2.81865 0.23582 2.88868 2.35662 18 - -
3172 1.38629 1.38629 1.38629 1.38629
3173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3174 19 0.23862 2.84929 2.43386 2.70756 19 - -
3175 1.38629 1.38629 1.38629 1.38629
3176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3177 20 0.23862 2.84929 2.43386 2.70756 20 - -
3178 1.38629 1.38629 1.38629 1.38629
3179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3180 21 2.53331 3.02441 0.20344 2.88069 21 - -
3181 1.38629 1.38629 1.38629 1.38629
3182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3183 22 2.53331 3.02441 0.20344 2.88069 22 - -
3184 1.38629 1.38629 1.38629 1.38629
3185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3186 23 2.53331 3.02441 0.20344 2.88069 23 - -
3187 1.38629 1.38629 1.38629 1.38629
3188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3189 24 2.81865 0.23582 2.88868 2.35662 24 - -
3190 1.38629 1.38629 1.38629 1.38629
3191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3192 25 0.23862 2.84929 2.43386 2.70756 25 - -
3193 1.38629 1.38629 1.38629 1.38629
3194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3195 26 2.57915 2.25909 2.64442 0.28946 26 - -
3196 1.38629 1.38629 1.38629 1.38629
3197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3198 27 2.53331 3.02441 0.20344 2.88069 27 - -
3199 1.38629 1.38629 1.38629 1.38629
3200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3201 28 2.81865 0.23582 2.88868 2.35662 28 - -
3202 1.38629 1.38629 1.38629 1.38629
3203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3204 29 2.81865 0.23582 2.88868 2.35662 29 - -
3205 1.38629 1.38629 1.38629 1.38629
3206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3207 30 2.57915 2.25909 2.64442 0.28946 30 - -
3208 1.38629 1.38629 1.38629 1.38629
3209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3210 31 2.57915 2.25909 2.64442 0.28946 31 - -
3211 1.38629 1.38629 1.38629 1.38629
3212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3213 32 2.81865 0.23582 2.88868 2.35662 32 - -
3214 1.38629 1.38629 1.38629 1.38629
3215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3216 33 2.81865 0.23582 2.88868 2.35662 33 - -
3217 1.38629 1.38629 1.38629 1.38629
3218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3219 34 2.57915 2.25909 2.64442 0.28946 34 - -
3220 1.38629 1.38629 1.38629 1.38629
3221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3222 35 2.53331 3.02441 0.20344 2.88069 35 - -
3223 1.38629 1.38629 1.38629 1.38629
3224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3225 36 0.23862 2.84929 2.43386 2.70756 36 - -
3226 1.38629 1.38629 1.38629 1.38629
3227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3228 37 2.53331 3.02441 0.20344 2.88069 37 - -
3229 1.38629 1.38629 1.38629 1.38629
3230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3231 38 2.81865 0.23582 2.88868 2.35662 38 - -
3232 1.38629 1.38629 1.38629 1.38629
3233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3234 39 0.23862 2.84929 2.43386 2.70756 39 - -
3235 1.38629 1.38629 1.38629 1.38629
3236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3237 40 2.57915 2.25909 2.64442 0.28946 40 - -
3238 1.38629 1.38629 1.38629 1.38629
3239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3240 41 2.81865 0.23582 2.88868 2.35662 41 - -
3241 1.38629 1.38629 1.38629 1.38629
3242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3243 42 2.81865 0.23582 2.88868 2.35662 42 - -
3244 1.38629 1.38629 1.38629 1.38629
3245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3246 43 2.81865 0.23582 2.88868 2.35662 43 - -
3247 1.38629 1.38629 1.38629 1.38629
3248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3249 44 2.81865 0.23582 2.88868 2.35662 44 - -
3250 1.38629 1.38629 1.38629 1.38629
3251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3252 45 2.53331 3.02441 0.20344 2.88069 45 - -
3253 1.38629 1.38629 1.38629 1.38629
3254 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3255 //
3256 HMMER3/b [3.0 | March 2010]
3257 NAME 3_End_Tracheophyta_58S_end_fortythreeg_long
3258 LENG 45
3259 ALPH DNA
3260 RF no
3261 CS no
3262 MAP yes
3263 DATE Sat Feb 18 01:14:18 2012
3264 NSEQ 2
3265 EFFN 2.000000
3266 CKSUM 908133251
3267 STATS LOCAL MSV -7.6472 0.72756
3268 STATS LOCAL VITERBI -8.1033 0.72756
3269 STATS LOCAL FORWARD -2.9704 0.72756
3270 HMM A C G T
3271 m->m m->i m->d i->m i->i d->m d->d
3272 COMPO 1.67672 1.01892 1.38834 1.59682
3273 1.38629 1.38629 1.38629 1.38629
3274 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3275 1 2.57915 2.25909 2.64442 0.28946 1 - -
3276 1.38629 1.38629 1.38629 1.38629
3277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3278 2 2.53331 3.02441 0.20344 2.88069 2 - -
3279 1.38629 1.38629 1.38629 1.38629
3280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3281 3 2.81865 0.23582 2.88868 2.35662 3 - -
3282 1.38629 1.38629 1.38629 1.38629
3283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3284 4 2.53331 3.02441 0.20344 2.88069 4 - -
3285 1.38629 1.38629 1.38629 1.38629
3286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3287 5 2.81865 0.23582 2.88868 2.35662 5 - -
3288 1.38629 1.38629 1.38629 1.38629
3289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3290 6 2.81865 0.23582 2.88868 2.35662 6 - -
3291 1.38629 1.38629 1.38629 1.38629
3292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3293 7 2.81865 0.23582 2.88868 2.35662 7 - -
3294 1.38629 1.38629 1.38629 1.38629
3295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3296 8 2.53331 3.02441 0.20344 2.88069 8 - -
3297 1.38629 1.38629 1.38629 1.38629
3298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3299 9 2.81865 0.23582 2.88868 2.35662 9 - -
3300 1.38629 1.38629 1.38629 1.38629
3301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3302 10 2.53331 3.02441 0.20344 2.88069 10 - -
3303 1.38629 1.38629 1.38629 1.38629
3304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3305 11 0.23862 2.84929 2.43386 2.70756 11 - -
3306 1.38629 1.38629 1.38629 1.38629
3307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3308 12 2.81865 0.23582 2.88868 2.35662 12 - -
3309 1.38629 1.38629 1.38629 1.38629
3310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3311 13 2.57915 2.25909 2.64442 0.28946 13 - -
3312 1.38629 1.38629 1.38629 1.38629
3313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3314 14 2.81865 0.23582 2.88868 2.35662 14 - -
3315 1.38629 1.38629 1.38629 1.38629
3316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3317 15 0.23862 2.84929 2.43386 2.70756 15 - -
3318 1.38629 1.38629 1.38629 1.38629
3319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3320 16 2.57915 2.25909 2.64442 0.28946 16 - -
3321 1.38629 1.38629 1.38629 1.38629
3322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3323 17 2.81865 0.23582 2.88868 2.35662 17 - -
3324 1.38629 1.38629 1.38629 1.38629
3325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3326 18 2.81865 0.23582 2.88868 2.35662 18 - -
3327 1.38629 1.38629 1.38629 1.38629
3328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3329 19 0.23862 2.84929 2.43386 2.70756 19 - -
3330 1.38629 1.38629 1.38629 1.38629
3331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3332 20 0.23862 2.84929 2.43386 2.70756 20 - -
3333 1.38629 1.38629 1.38629 1.38629
3334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3335 21 2.53331 3.02441 0.20344 2.88069 21 - -
3336 1.38629 1.38629 1.38629 1.38629
3337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3338 22 2.53331 3.02441 0.20344 2.88069 22 - -
3339 1.38629 1.38629 1.38629 1.38629
3340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3341 23 2.53331 3.02441 0.20344 2.88069 23 - -
3342 1.38629 1.38629 1.38629 1.38629
3343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3344 24 2.81865 0.23582 2.88868 2.35662 24 - -
3345 1.38629 1.38629 1.38629 1.38629
3346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3347 25 0.23862 2.84929 2.43386 2.70756 25 - -
3348 1.38629 1.38629 1.38629 1.38629
3349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3350 26 2.57915 2.25909 2.64442 0.28946 26 - -
3351 1.38629 1.38629 1.38629 1.38629
3352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3353 27 2.53331 3.02441 0.20344 2.88069 27 - -
3354 1.38629 1.38629 1.38629 1.38629
3355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3356 28 2.81865 0.23582 2.88868 2.35662 28 - -
3357 1.38629 1.38629 1.38629 1.38629
3358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3359 29 2.81865 0.23582 2.88868 2.35662 29 - -
3360 1.38629 1.38629 1.38629 1.38629
3361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3362 30 2.57915 2.25909 2.64442 0.28946 30 - -
3363 1.38629 1.38629 1.38629 1.38629
3364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3365 31 2.57915 2.25909 2.64442 0.28946 31 - -
3366 1.38629 1.38629 1.38629 1.38629
3367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3368 32 2.81865 0.23582 2.88868 2.35662 32 - -
3369 1.38629 1.38629 1.38629 1.38629
3370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3371 33 2.81865 0.23582 2.88868 2.35662 33 - -
3372 1.38629 1.38629 1.38629 1.38629
3373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3374 34 2.57915 2.25909 2.64442 0.28946 34 - -
3375 1.38629 1.38629 1.38629 1.38629
3376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3377 35 2.53331 3.02441 0.20344 2.88069 35 - -
3378 1.38629 1.38629 1.38629 1.38629
3379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3380 36 0.23862 2.84929 2.43386 2.70756 36 - -
3381 1.38629 1.38629 1.38629 1.38629
3382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3383 37 2.53331 3.02441 0.20344 2.88069 37 - -
3384 1.38629 1.38629 1.38629 1.38629
3385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3386 38 2.81865 0.23582 2.88868 2.35662 38 - -
3387 1.38629 1.38629 1.38629 1.38629
3388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3389 39 2.53331 3.02441 0.20344 2.88069 39 - -
3390 1.38629 1.38629 1.38629 1.38629
3391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3392 40 2.57915 2.25909 2.64442 0.28946 40 - -
3393 1.38629 1.38629 1.38629 1.38629
3394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3395 41 2.81865 0.23582 2.88868 2.35662 41 - -
3396 1.38629 1.38629 1.38629 1.38629
3397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3398 42 2.81865 0.23582 2.88868 2.35662 42 - -
3399 1.38629 1.38629 1.38629 1.38629
3400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3401 43 2.81865 0.23582 2.88868 2.35662 43 - -
3402 1.38629 1.38629 1.38629 1.38629
3403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3404 44 2.81865 0.23582 2.88868 2.35662 44 - -
3405 1.38629 1.38629 1.38629 1.38629
3406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3407 45 0.23862 2.84929 2.43386 2.70756 45 - -
3408 1.38629 1.38629 1.38629 1.38629
3409 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3410 //
3411 HMMER3/b [3.0 | March 2010]
3412 NAME 3_End_Tracheophyta_58S_end_fortytwo_long
3413 LENG 45
3414 ALPH DNA
3415 RF no
3416 CS no
3417 MAP yes
3418 DATE Sat Feb 18 01:13:18 2012
3419 NSEQ 4
3420 EFFN 3.246094
3421 CKSUM 3050631641
3422 STATS LOCAL MSV -7.9920 0.71931
3423 STATS LOCAL VITERBI -7.7116 0.71931
3424 STATS LOCAL FORWARD -3.9001 0.71931
3425 HMM A C G T
3426 m->m m->i m->d i->m i->i d->m d->d
3427 COMPO 1.54804 1.53365 1.19335 1.31533
3428 1.38629 1.38629 1.38629 1.38629
3429 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 *
3430 1 2.93012 3.56249 0.11996 3.46456 1 - -
3431 1.38629 1.38629 1.38629 1.38629
3432 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3433 2 3.40447 0.13368 3.45513 2.80810 2 - -
3434 1.38629 1.38629 1.38629 1.38629
3435 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3436 3 0.14522 3.35543 2.78576 3.25475 3 - -
3437 1.38629 1.38629 1.38629 1.38629
3438 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3439 4 3.40447 0.13368 3.45513 2.80810 4 - -
3440 1.38629 1.38629 1.38629 1.38629
3441 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3442 5 3.06361 2.57923 3.11272 0.18276 5 - -
3443 1.38629 1.38629 1.38629 1.38629
3444 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3445 6 3.06361 2.57923 3.11272 0.18276 6 - -
3446 1.38629 1.38629 1.38629 1.38629
3447 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3448 7 3.40447 0.13368 3.45513 2.80810 7 - -
3449 1.38629 1.38629 1.38629 1.38629
3450 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3451 8 3.06361 2.57923 3.11272 0.18276 8 - -
3452 1.38629 1.38629 1.38629 1.38629
3453 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3454 9 3.06361 2.57923 3.11272 0.18276 9 - -
3455 1.38629 1.38629 1.38629 1.38629
3456 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3457 10 2.93012 3.56249 0.11996 3.46456 10 - -
3458 1.38629 1.38629 1.38629 1.38629
3459 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3460 11 2.93012 3.56249 0.11996 3.46456 11 - -
3461 1.38629 1.38629 1.38629 1.38629
3462 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3463 12 3.06361 2.57923 3.11272 0.18276 12 - -
3464 1.38629 1.38629 1.38629 1.38629
3465 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3466 13 0.14522 3.35543 2.78576 3.25475 13 - -
3467 1.38629 1.38629 1.38629 1.38629
3468 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3469 14 3.06361 2.57923 3.11272 0.18276 14 - -
3470 1.38629 1.38629 1.38629 1.38629
3471 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3472 15 3.06361 2.57923 3.11272 0.18276 15 - -
3473 1.38629 1.38629 1.38629 1.38629
3474 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3475 16 3.40447 0.13368 3.45513 2.80810 16 - -
3476 1.38629 1.38629 1.38629 1.38629
3477 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3478 17 3.40447 0.13368 3.45513 2.80810 17 - -
3479 1.38629 1.38629 1.38629 1.38629
3480 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3481 18 2.93012 3.56249 0.11996 3.46456 18 - -
3482 1.38629 1.38629 1.38629 1.38629
3483 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3484 19 0.14522 3.35543 2.78576 3.25475 19 - -
3485 1.38629 1.38629 1.38629 1.38629
3486 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3487 20 2.93012 3.56249 0.11996 3.46456 20 - -
3488 1.38629 1.38629 1.38629 1.38629
3489 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3490 21 2.93012 3.56249 0.11996 3.46456 21 - -
3491 1.38629 1.38629 1.38629 1.38629
3492 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3493 22 0.14522 3.35543 2.78576 3.25475 22 - -
3494 1.38629 1.38629 1.38629 1.38629
3495 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3496 23 2.93012 3.56249 0.11996 3.46456 23 - -
3497 1.38629 1.38629 1.38629 1.38629
3498 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3499 24 3.06361 2.57923 3.11272 0.18276 24 - -
3500 1.38629 1.38629 1.38629 1.38629
3501 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3502 25 0.14522 3.35543 2.78576 3.25475 25 - -
3503 1.38629 1.38629 1.38629 1.38629
3504 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3505 26 3.40447 0.13368 3.45513 2.80810 26 - -
3506 1.38629 1.38629 1.38629 1.38629
3507 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3508 27 0.14522 3.35543 2.78576 3.25475 27 - -
3509 1.38629 1.38629 1.38629 1.38629
3510 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3511 28 3.40447 0.13368 3.45513 2.80810 28 - -
3512 1.38629 1.38629 1.38629 1.38629
3513 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3514 29 0.14522 3.35543 2.78576 3.25475 29 - -
3515 1.38629 1.38629 1.38629 1.38629
3516 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3517 30 3.06361 2.57923 3.11272 0.18276 30 - -
3518 1.38629 1.38629 1.38629 1.38629
3519 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3520 31 2.93012 3.56249 0.11996 3.46456 31 - -
3521 1.38629 1.38629 1.38629 1.38629
3522 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3523 32 3.40447 0.13368 3.45513 2.80810 32 - -
3524 1.38629 1.38629 1.38629 1.38629
3525 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3526 33 3.06361 2.57923 3.11272 0.18276 33 - -
3527 1.38629 1.38629 1.38629 1.38629
3528 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3529 34 3.06361 2.57923 3.11272 0.18276 34 - -
3530 1.38629 1.38629 1.38629 1.38629
3531 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3532 35 2.93012 3.56249 0.11996 3.46456 35 - -
3533 1.38629 1.38629 1.38629 1.38629
3534 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3535 36 0.14522 3.35543 2.78576 3.25475 36 - -
3536 1.38629 1.38629 1.38629 1.38629
3537 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3538 37 2.93012 3.56249 0.11996 3.46456 37 - -
3539 1.38629 1.38629 1.38629 1.38629
3540 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3541 38 2.93012 3.56249 0.11996 3.46456 38 - -
3542 1.38629 1.38629 1.38629 1.38629
3543 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3544 39 2.93012 3.56249 0.11996 3.46456 39 - -
3545 1.38629 1.38629 1.38629 1.38629
3546 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3547 40 3.06361 2.57923 3.11272 0.18276 40 - -
3548 1.38629 1.38629 1.38629 1.38629
3549 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3550 41 3.40447 0.13368 3.45513 2.80810 41 - -
3551 1.38629 1.38629 1.38629 1.38629
3552 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3553 42 0.14522 3.35543 2.78576 3.25475 42 - -
3554 1.38629 1.38629 1.38629 1.38629
3555 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3556 43 2.93012 3.56249 0.11996 3.46456 43 - -
3557 1.38629 1.38629 1.38629 1.38629
3558 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3559 44 3.06361 2.57923 3.11272 0.18276 44 - -
3560 1.38629 1.38629 1.38629 1.38629
3561 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547
3562 45 2.93012 3.56249 0.11996 3.46456 45 - -
3563 1.38629 1.38629 1.38629 1.38629
3564 0.01888 3.97895 * 1.46634 0.26236 0.00000 *
3565 //
3566 HMMER3/b [3.0 | March 2010]
3567 NAME 3_End_Tracheophyta_58S_end_foura_long
3568 LENG 45
3569 ALPH DNA
3570 RF no
3571 CS no
3572 MAP yes
3573 DATE Sat Feb 18 00:55:55 2012
3574 NSEQ 84
3575 EFFN 3.847778
3576 CKSUM 4048195829
3577 STATS LOCAL MSV -7.0232 0.71933
3578 STATS LOCAL VITERBI -7.5679 0.71933
3579 STATS LOCAL FORWARD -3.6342 0.71933
3580 HMM A C G T
3581 m->m m->i m->d i->m i->i d->m d->d
3582 COMPO 1.83579 1.09209 1.08959 1.77996
3583 1.38629 1.38629 1.38629 1.38629
3584 0.03363 4.10228 4.10228 1.46634 0.26236 0.00000 *
3585 1 3.05237 3.74189 0.10160 3.66308 1 - -
3586 1.38629 1.38629 1.38629 1.38629
3587 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3588 2 3.60983 0.11097 3.65148 2.95601 2 - -
3589 1.38629 1.38629 1.38629 1.38629
3590 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3591 3 3.60983 0.11097 3.65148 2.95601 3 - -
3592 1.38629 1.38629 1.38629 1.38629
3593 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3594 4 3.60983 0.11097 3.65148 2.95601 4 - -
3595 1.38629 1.38629 1.38629 1.38629
3596 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3597 5 0.65354 2.63334 1.12312 2.49258 5 - -
3598 1.38629 1.38629 1.38629 1.38629
3599 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3600 6 0.12310 3.53457 2.90140 3.45121 6 - -
3601 1.38629 1.38629 1.38629 1.38629
3602 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3603 7 0.14875 3.43421 2.64957 3.34423 7 - -
3604 1.38629 1.38629 1.38629 1.38629
3605 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3606 8 0.99864 2.61882 0.74515 2.47612 8 - -
3607 1.38629 1.38629 1.38629 1.38629
3608 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3609 9 3.60983 0.11097 3.65148 2.95601 9 - -
3610 1.38629 1.38629 1.38629 1.38629
3611 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3612 10 3.52435 0.12777 3.56920 2.77588 10 - -
3613 1.38629 1.38629 1.38629 1.38629
3614 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3615 11 2.92049 1.95573 2.97625 0.28283 11 - -
3616 1.38629 1.38629 1.38629 1.38629
3617 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3618 12 3.16088 2.47148 3.20649 0.18314 12 - -
3619 1.38629 1.38629 1.38629 1.38629
3620 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3621 13 3.60983 0.11097 3.65148 2.95601 13 - -
3622 1.38629 1.38629 1.38629 1.38629
3623 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3624 14 2.88034 3.67195 0.11561 3.58856 14 - -
3625 1.38629 1.38629 1.38629 1.38629
3626 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3627 15 3.05237 3.74189 0.10160 3.66308 15 - -
3628 1.38629 1.38629 1.38629 1.38629
3629 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3630 16 3.05237 3.74189 0.10160 3.66308 16 - -
3631 1.38629 1.38629 1.38629 1.38629
3632 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3633 17 2.49739 0.93875 2.56828 0.79870 17 - -
3634 1.38629 1.38629 1.38629 1.38629
3635 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3636 18 3.52522 0.12759 3.57003 2.77761 18 - -
3637 1.38629 1.38629 1.38629 1.38629
3638 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3639 19 2.73085 3.60227 0.13036 3.51344 19 - -
3640 1.38629 1.38629 1.38629 1.38629
3641 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3642 20 0.12310 3.53457 2.90140 3.45121 20 - -
3643 1.38629 1.38629 1.38629 1.38629
3644 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3645 21 3.05237 3.74189 0.10160 3.66308 21 - -
3646 1.38629 1.38629 1.38629 1.38629
3647 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3648 22 3.05237 3.74189 0.10160 3.66308 22 - -
3649 1.38629 1.38629 1.38629 1.38629
3650 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3651 23 3.05237 3.74189 0.10160 3.66308 23 - -
3652 1.38629 1.38629 1.38629 1.38629
3653 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3654 24 3.60983 0.11097 3.65148 2.95601 24 - -
3655 1.38629 1.38629 1.38629 1.38629
3656 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3657 25 0.12310 3.53457 2.90140 3.45121 25 - -
3658 1.38629 1.38629 1.38629 1.38629
3659 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3660 26 3.60983 0.11097 3.65148 2.95601 26 - -
3661 1.38629 1.38629 1.38629 1.38629
3662 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3663 27 3.05237 3.74189 0.10160 3.66308 27 - -
3664 1.38629 1.38629 1.38629 1.38629
3665 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3666 28 2.72644 1.58672 2.78931 0.40274 28 - -
3667 1.38629 1.38629 1.38629 1.38629
3668 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3669 29 3.60983 0.11097 3.65148 2.95601 29 - -
3670 1.38629 1.38629 1.38629 1.38629
3671 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3672 30 3.24719 2.69574 3.28917 0.15509 30 - -
3673 1.38629 1.38629 1.38629 1.38629
3674 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3675 31 3.05237 3.74189 0.10160 3.66308 31 - -
3676 1.38629 1.38629 1.38629 1.38629
3677 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3678 32 3.60983 0.11097 3.65148 2.95601 32 - -
3679 1.38629 1.38629 1.38629 1.38629
3680 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3681 33 3.60983 0.11097 3.65148 2.95601 33 - -
3682 1.38629 1.38629 1.38629 1.38629
3683 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3684 34 3.24719 2.69574 3.28917 0.15509 34 - -
3685 1.38629 1.38629 1.38629 1.38629
3686 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3687 35 3.05237 3.74189 0.10160 3.66308 35 - -
3688 1.38629 1.38629 1.38629 1.38629
3689 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3690 36 3.05237 3.74189 0.10160 3.66308 36 - -
3691 1.38629 1.38629 1.38629 1.38629
3692 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3693 37 3.05237 3.74189 0.10160 3.66308 37 - -
3694 1.38629 1.38629 1.38629 1.38629
3695 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3696 38 2.52147 1.09588 2.59121 0.67239 38 - -
3697 1.38629 1.38629 1.38629 1.38629
3698 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3699 39 3.05237 3.74189 0.10160 3.66308 39 - -
3700 1.38629 1.38629 1.38629 1.38629
3701 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3702 40 3.24719 2.69574 3.28917 0.15509 40 - -
3703 1.38629 1.38629 1.38629 1.38629
3704 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3705 41 3.60983 0.11097 3.65148 2.95601 41 - -
3706 1.38629 1.38629 1.38629 1.38629
3707 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3708 42 0.12310 3.53457 2.90140 3.45121 42 - -
3709 1.38629 1.38629 1.38629 1.38629
3710 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3711 43 3.60983 0.11097 3.65148 2.95601 43 - -
3712 1.38629 1.38629 1.38629 1.38629
3713 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3714 44 3.05237 3.74189 0.10160 3.66308 44 - -
3715 1.38629 1.38629 1.38629 1.38629
3716 0.03363 4.10228 4.10228 1.46634 0.26236 1.09861 0.40547
3717 45 3.40214 0.15437 3.45168 2.55037 45 - -
3718 1.38629 1.38629 1.38629 1.38629
3719 0.01696 4.08560 * 1.46634 0.26236 0.00000 *
3720 //
3721 HMMER3/b [3.0 | March 2010]
3722 NAME 3_End_Tracheophyta_58S_end_fourb_long
3723 LENG 45
3724 ALPH DNA
3725 RF no
3726 CS no
3727 MAP yes
3728 DATE Sat Feb 18 00:56:01 2012
3729 NSEQ 72
3730 EFFN 3.353027
3731 CKSUM 2221390108
3732 STATS LOCAL MSV -8.2307 0.71933
3733 STATS LOCAL VITERBI -7.6868 0.71933
3734 STATS LOCAL FORWARD -3.6608 0.71933
3735 HMM A C G T
3736 m->m m->i m->d i->m i->i d->m d->d
3737 COMPO 1.84517 1.20286 1.08278 1.59447
3738 1.38629 1.38629 1.38629 1.38629
3739 0.03668 4.01693 4.01693 1.46634 0.26236 0.00000 *
3740 1 2.95426 3.59755 0.11609 3.50324 1 - -
3741 1.38629 1.38629 1.38629 1.38629
3742 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3743 2 3.44424 0.12889 3.49323 2.83710 2 - -
3744 1.38629 1.38629 1.38629 1.38629
3745 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3746 3 3.44424 0.12889 3.49323 2.83710 3 - -
3747 1.38629 1.38629 1.38629 1.38629
3748 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3749 4 3.30174 0.16053 3.35503 2.56941 4 - -
3750 1.38629 1.38629 1.38629 1.38629
3751 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3752 5 0.39178 2.77392 1.65838 2.64108 5 - -
3753 1.38629 1.38629 1.38629 1.38629
3754 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3755 6 0.14063 3.38993 2.80820 3.29251 6 - -
3756 1.38629 1.38629 1.38629 1.38629
3757 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3758 7 0.14063 3.38993 2.80820 3.29251 7 - -
3759 1.38629 1.38629 1.38629 1.38629
3760 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3761 8 2.95426 3.59755 0.11609 3.50324 8 - -
3762 1.38629 1.38629 1.38629 1.38629
3763 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3764 9 3.44424 0.12889 3.49323 2.83710 9 - -
3765 1.38629 1.38629 1.38629 1.38629
3766 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3767 10 3.44424 0.12889 3.49323 2.83710 10 - -
3768 1.38629 1.38629 1.38629 1.38629
3769 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3770 11 3.03572 2.44757 3.08564 0.19875 11 - -
3771 1.38629 1.38629 1.38629 1.38629
3772 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3773 12 3.09838 2.60135 3.14616 0.17711 12 - -
3774 1.38629 1.38629 1.38629 1.38629
3775 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3776 13 3.25955 0.17093 3.31416 2.49677 13 - -
3777 1.38629 1.38629 1.38629 1.38629
3778 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3779 14 2.95426 3.59755 0.11609 3.50324 14 - -
3780 1.38629 1.38629 1.38629 1.38629
3781 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3782 15 2.95426 3.59755 0.11609 3.50324 15 - -
3783 1.38629 1.38629 1.38629 1.38629
3784 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3785 16 2.95426 3.59755 0.11609 3.50324 16 - -
3786 1.38629 1.38629 1.38629 1.38629
3787 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3788 17 3.35136 0.14895 3.40309 2.65806 17 - -
3789 1.38629 1.38629 1.38629 1.38629
3790 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3791 18 3.33783 0.15205 3.38998 2.63348 18 - -
3792 1.38629 1.38629 1.38629 1.38629
3793 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3794 19 2.95426 3.59755 0.11609 3.50324 19 - -
3795 1.38629 1.38629 1.38629 1.38629
3796 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3797 20 0.14063 3.38993 2.80820 3.29251 20 - -
3798 1.38629 1.38629 1.38629 1.38629
3799 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3800 21 2.95426 3.59755 0.11609 3.50324 21 - -
3801 1.38629 1.38629 1.38629 1.38629
3802 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3803 22 2.95426 3.59755 0.11609 3.50324 22 - -
3804 1.38629 1.38629 1.38629 1.38629
3805 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3806 23 2.95426 3.59755 0.11609 3.50324 23 - -
3807 1.38629 1.38629 1.38629 1.38629
3808 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3809 24 3.44424 0.12889 3.49323 2.83710 24 - -
3810 1.38629 1.38629 1.38629 1.38629
3811 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3812 25 0.14063 3.38993 2.80820 3.29251 25 - -
3813 1.38629 1.38629 1.38629 1.38629
3814 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3815 26 3.44424 0.12889 3.49323 2.83710 26 - -
3816 1.38629 1.38629 1.38629 1.38629
3817 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3818 27 2.95426 3.59755 0.11609 3.50324 27 - -
3819 1.38629 1.38629 1.38629 1.38629
3820 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3821 28 3.00267 2.37154 3.05383 0.21093 28 - -
3822 1.38629 1.38629 1.38629 1.38629
3823 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3824 29 3.44424 0.12889 3.49323 2.83710 29 - -
3825 1.38629 1.38629 1.38629 1.38629
3826 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3827 30 3.09838 2.60135 3.14616 0.17711 30 - -
3828 1.38629 1.38629 1.38629 1.38629
3829 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3830 31 2.95426 3.59755 0.11609 3.50324 31 - -
3831 1.38629 1.38629 1.38629 1.38629
3832 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3833 32 3.44424 0.12889 3.49323 2.83710 32 - -
3834 1.38629 1.38629 1.38629 1.38629
3835 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3836 33 3.44424 0.12889 3.49323 2.83710 33 - -
3837 1.38629 1.38629 1.38629 1.38629
3838 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3839 34 3.09838 2.60135 3.14616 0.17711 34 - -
3840 1.38629 1.38629 1.38629 1.38629
3841 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3842 35 2.95426 3.59755 0.11609 3.50324 35 - -
3843 1.38629 1.38629 1.38629 1.38629
3844 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3845 36 2.95426 3.59755 0.11609 3.50324 36 - -
3846 1.38629 1.38629 1.38629 1.38629
3847 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3848 37 2.95426 3.59755 0.11609 3.50324 37 - -
3849 1.38629 1.38629 1.38629 1.38629
3850 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3851 38 3.09838 2.60135 3.14616 0.17711 38 - -
3852 1.38629 1.38629 1.38629 1.38629
3853 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3854 39 2.95426 3.59755 0.11609 3.50324 39 - -
3855 1.38629 1.38629 1.38629 1.38629
3856 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3857 40 3.09838 2.60135 3.14616 0.17711 40 - -
3858 1.38629 1.38629 1.38629 1.38629
3859 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3860 41 3.44424 0.12889 3.49323 2.83710 41 - -
3861 1.38629 1.38629 1.38629 1.38629
3862 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3863 42 0.14063 3.38993 2.80820 3.29251 42 - -
3864 1.38629 1.38629 1.38629 1.38629
3865 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3866 43 3.09838 2.60135 3.14616 0.17711 43 - -
3867 1.38629 1.38629 1.38629 1.38629
3868 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3869 44 2.55487 3.39693 0.16062 3.29129 44 - -
3870 1.38629 1.38629 1.38629 1.38629
3871 0.03668 4.01693 4.01693 1.46634 0.26236 1.09861 0.40547
3872 45 2.69179 1.73920 2.75435 0.36683 45 - -
3873 1.38629 1.38629 1.38629 1.38629
3874 0.01851 3.99876 * 1.46634 0.26236 0.00000 *
3875 //
3876 HMMER3/b [3.0 | March 2010]
3877 NAME 3_End_Tracheophyta_58S_end_fourteena_long
3878 LENG 45
3879 ALPH DNA
3880 RF no
3881 CS no
3882 MAP yes
3883 DATE Sat Feb 18 00:58:34 2012
3884 NSEQ 22
3885 EFFN 3.279053
3886 CKSUM 925715289
3887 STATS LOCAL MSV -8.1455 0.71932
3888 STATS LOCAL VITERBI -7.7758 0.71932
3889 STATS LOCAL FORWARD -3.6982 0.71932
3890 HMM A C G T
3891 m->m m->i m->d i->m i->i d->m d->d
3892 COMPO 1.93052 1.08270 1.09008 1.71448
3893 1.38629 1.38629 1.38629 1.38629
3894 0.03719 4.00352 4.00352 1.46634 0.26236 0.00000 *
3895 1 2.93769 3.57346 0.11874 3.47665 1 - -
3896 1.38629 1.38629 1.38629 1.38629
3897 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3898 2 3.41689 0.13216 3.46703 2.81717 2 - -
3899 1.38629 1.38629 1.38629 1.38629
3900 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3901 3 3.41689 0.13216 3.46703 2.81717 3 - -
3902 1.38629 1.38629 1.38629 1.38629
3903 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3904 4 3.41689 0.13216 3.46703 2.81717 4 - -
3905 1.38629 1.38629 1.38629 1.38629
3906 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3907 5 2.93769 3.57346 0.11874 3.47665 5 - -
3908 1.38629 1.38629 1.38629 1.38629
3909 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3910 6 0.14377 3.36619 2.79278 3.26653 6 - -
3911 1.38629 1.38629 1.38629 1.38629
3912 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3913 7 0.14377 3.36619 2.79278 3.26653 7 - -
3914 1.38629 1.38629 1.38629 1.38629
3915 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3916 8 2.93769 3.57346 0.11874 3.47665 8 - -
3917 1.38629 1.38629 1.38629 1.38629
3918 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3919 9 3.41689 0.13216 3.46703 2.81717 9 - -
3920 1.38629 1.38629 1.38629 1.38629
3921 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3922 10 3.41689 0.13216 3.46703 2.81717 10 - -
3923 1.38629 1.38629 1.38629 1.38629
3924 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3925 11 3.07443 2.58612 3.12313 0.18098 11 - -
3926 1.38629 1.38629 1.38629 1.38629
3927 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3928 12 2.94214 2.27790 2.99548 0.22975 12 - -
3929 1.38629 1.38629 1.38629 1.38629
3930 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3931 13 2.67926 0.40755 2.74840 1.59911 13 - -
3932 1.38629 1.38629 1.38629 1.38629
3933 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3934 14 2.51627 0.56322 2.58799 1.29210 14 - -
3935 1.38629 1.38629 1.38629 1.38629
3936 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3937 15 2.93769 3.57346 0.11874 3.47665 15 - -
3938 1.38629 1.38629 1.38629 1.38629
3939 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3940 16 2.93769 3.57346 0.11874 3.47665 16 - -
3941 1.38629 1.38629 1.38629 1.38629
3942 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3943 17 3.41689 0.13216 3.46703 2.81717 17 - -
3944 1.38629 1.38629 1.38629 1.38629
3945 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3946 18 3.41689 0.13216 3.46703 2.81717 18 - -
3947 1.38629 1.38629 1.38629 1.38629
3948 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3949 19 2.93769 3.57346 0.11874 3.47665 19 - -
3950 1.38629 1.38629 1.38629 1.38629
3951 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3952 20 0.14377 3.36619 2.79278 3.26653 20 - -
3953 1.38629 1.38629 1.38629 1.38629
3954 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3955 21 2.93769 3.57346 0.11874 3.47665 21 - -
3956 1.38629 1.38629 1.38629 1.38629
3957 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3958 22 2.93769 3.57346 0.11874 3.47665 22 - -
3959 1.38629 1.38629 1.38629 1.38629
3960 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3961 23 2.93769 3.57346 0.11874 3.47665 23 - -
3962 1.38629 1.38629 1.38629 1.38629
3963 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3964 24 3.41689 0.13216 3.46703 2.81717 24 - -
3965 1.38629 1.38629 1.38629 1.38629
3966 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3967 25 0.14377 3.36619 2.79278 3.26653 25 - -
3968 1.38629 1.38629 1.38629 1.38629
3969 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3970 26 3.41689 0.13216 3.46703 2.81717 26 - -
3971 1.38629 1.38629 1.38629 1.38629
3972 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3973 27 2.93769 3.57346 0.11874 3.47665 27 - -
3974 1.38629 1.38629 1.38629 1.38629
3975 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3976 28 3.41689 0.13216 3.46703 2.81717 28 - -
3977 1.38629 1.38629 1.38629 1.38629
3978 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3979 29 3.41689 0.13216 3.46703 2.81717 29 - -
3980 1.38629 1.38629 1.38629 1.38629
3981 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3982 30 3.07443 2.58612 3.12313 0.18098 30 - -
3983 1.38629 1.38629 1.38629 1.38629
3984 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3985 31 2.93769 3.57346 0.11874 3.47665 31 - -
3986 1.38629 1.38629 1.38629 1.38629
3987 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3988 32 3.41689 0.13216 3.46703 2.81717 32 - -
3989 1.38629 1.38629 1.38629 1.38629
3990 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3991 33 3.41689 0.13216 3.46703 2.81717 33 - -
3992 1.38629 1.38629 1.38629 1.38629
3993 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3994 34 3.07443 2.58612 3.12313 0.18098 34 - -
3995 1.38629 1.38629 1.38629 1.38629
3996 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
3997 35 2.93769 3.57346 0.11874 3.47665 35 - -
3998 1.38629 1.38629 1.38629 1.38629
3999 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4000 36 2.93769 3.57346 0.11874 3.47665 36 - -
4001 1.38629 1.38629 1.38629 1.38629
4002 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4003 37 2.93769 3.57346 0.11874 3.47665 37 - -
4004 1.38629 1.38629 1.38629 1.38629
4005 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4006 38 3.07443 2.58612 3.12313 0.18098 38 - -
4007 1.38629 1.38629 1.38629 1.38629
4008 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4009 39 2.93769 3.57346 0.11874 3.47665 39 - -
4010 1.38629 1.38629 1.38629 1.38629
4011 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4012 40 3.07443 2.58612 3.12313 0.18098 40 - -
4013 1.38629 1.38629 1.38629 1.38629
4014 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4015 41 3.41689 0.13216 3.46703 2.81717 41 - -
4016 1.38629 1.38629 1.38629 1.38629
4017 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4018 42 0.14377 3.36619 2.79278 3.26653 42 - -
4019 1.38629 1.38629 1.38629 1.38629
4020 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4021 43 3.07443 2.58612 3.12313 0.18098 43 - -
4022 1.38629 1.38629 1.38629 1.38629
4023 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4024 44 2.93769 3.57346 0.11874 3.47665 44 - -
4025 1.38629 1.38629 1.38629 1.38629
4026 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547
4027 45 3.41689 0.13216 3.46703 2.81717 45 - -
4028 1.38629 1.38629 1.38629 1.38629
4029 0.01877 3.98510 * 1.46634 0.26236 0.00000 *
4030 //
4031 HMMER3/b [3.0 | March 2010]
4032 NAME 3_End_Tracheophyta_58S_end_fourteenb_long
4033 LENG 45
4034 ALPH DNA
4035 RF no
4036 CS no
4037 MAP yes
4038 DATE Sat Feb 18 00:58:43 2012
4039 NSEQ 70
4040 EFFN 5.088501
4041 CKSUM 3721269259
4042 STATS LOCAL MSV -6.9134 0.71932
4043 STATS LOCAL VITERBI -7.5879 0.71932
4044 STATS LOCAL FORWARD -3.9680 0.71932
4045 HMM A C G T
4046 m->m m->i m->d i->m i->i d->m d->d
4047 COMPO 1.74852 1.17930 1.12647 1.63836
4048 1.38629 1.38629 1.38629 1.38629
4049 0.02782 4.28888 4.28888 1.46634 0.26236 0.00000 *
4050 1 3.23147 4.00602 0.07995 3.95644 1 - -
4051 1.38629 1.38629 1.38629 1.38629
4052 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4053 2 3.91828 0.08456 3.94536 3.17332 2 - -
4054 1.38629 1.38629 1.38629 1.38629
4055 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4056 3 3.91828 0.08456 3.94536 3.17332 3 - -
4057 1.38629 1.38629 1.38629 1.38629
4058 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4059 4 3.91828 0.08456 3.94536 3.17332 4 - -
4060 1.38629 1.38629 1.38629 1.38629
4061 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4062 5 0.79959 2.79109 0.87053 2.65351 5 - -
4063 1.38629 1.38629 1.38629 1.38629
4064 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4065 6 0.09584 3.81176 3.08128 3.75595 6 - -
4066 1.38629 1.38629 1.38629 1.38629
4067 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4068 7 0.15518 3.59484 2.44690 3.51624 7 - -
4069 1.38629 1.38629 1.38629 1.38629
4070 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4071 8 3.23147 4.00602 0.07995 3.95644 8 - -
4072 1.38629 1.38629 1.38629 1.38629
4073 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4074 9 3.91828 0.08456 3.94536 3.17332 9 - -
4075 1.38629 1.38629 1.38629 1.38629
4076 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4077 10 3.68591 0.13033 3.72518 2.61710 10 - -
4078 1.38629 1.38629 1.38629 1.38629
4079 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4080 11 1.02535 2.25303 1.99463 0.91583 11 - -
4081 1.38629 1.38629 1.38629 1.38629
4082 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4083 12 3.54765 2.88869 3.57783 0.11921 12 - -
4084 1.38629 1.38629 1.38629 1.38629
4085 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4086 13 2.86796 1.36880 2.92992 0.45354 13 - -
4087 1.38629 1.38629 1.38629 1.38629
4088 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4089 14 0.92182 2.35489 2.37750 0.88063 14 - -
4090 1.38629 1.38629 1.38629 1.38629
4091 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4092 15 3.00728 3.52277 0.15387 2.75403 15 - -
4093 1.38629 1.38629 1.38629 1.38629
4094 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4095 16 3.23147 4.00602 0.07995 3.95644 16 - -
4096 1.38629 1.38629 1.38629 1.38629
4097 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4098 17 2.70343 0.91545 2.77157 0.75476 17 - -
4099 1.38629 1.38629 1.38629 1.38629
4100 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4101 18 2.70302 0.91159 2.77119 0.75817 18 - -
4102 1.38629 1.38629 1.38629 1.38629
4103 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4104 19 2.57166 3.76703 0.13292 3.69155 19 - -
4105 1.38629 1.38629 1.38629 1.38629
4106 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4107 20 0.09584 3.81176 3.08128 3.75595 20 - -
4108 1.38629 1.38629 1.38629 1.38629
4109 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4110 21 3.23147 4.00602 0.07995 3.95644 21 - -
4111 1.38629 1.38629 1.38629 1.38629
4112 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4113 22 3.23147 4.00602 0.07995 3.95644 22 - -
4114 1.38629 1.38629 1.38629 1.38629
4115 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4116 23 3.23147 4.00602 0.07995 3.95644 23 - -
4117 1.38629 1.38629 1.38629 1.38629
4118 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4119 24 3.91828 0.08456 3.94536 3.17332 24 - -
4120 1.38629 1.38629 1.38629 1.38629
4121 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4122 25 0.09584 3.81176 3.08128 3.75595 25 - -
4123 1.38629 1.38629 1.38629 1.38629
4124 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4125 26 3.91828 0.08456 3.94536 3.17332 26 - -
4126 1.38629 1.38629 1.38629 1.38629
4127 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4128 27 3.23147 4.00602 0.07995 3.95644 27 - -
4129 1.38629 1.38629 1.38629 1.38629
4130 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4131 28 2.90699 1.44095 2.96753 0.41973 28 - -
4132 1.38629 1.38629 1.38629 1.38629
4133 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4134 29 3.91828 0.08456 3.94536 3.17332 29 - -
4135 1.38629 1.38629 1.38629 1.38629
4136 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4137 30 3.54765 2.88869 3.57783 0.11921 30 - -
4138 1.38629 1.38629 1.38629 1.38629
4139 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4140 31 3.23147 4.00602 0.07995 3.95644 31 - -
4141 1.38629 1.38629 1.38629 1.38629
4142 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4143 32 2.92260 0.28356 2.11528 2.62403 32 - -
4144 1.38629 1.38629 1.38629 1.38629
4145 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4146 33 3.91828 0.08456 3.94536 3.17332 33 - -
4147 1.38629 1.38629 1.38629 1.38629
4148 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4149 34 3.54765 2.88869 3.57783 0.11921 34 - -
4150 1.38629 1.38629 1.38629 1.38629
4151 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4152 35 3.23147 4.00602 0.07995 3.95644 35 - -
4153 1.38629 1.38629 1.38629 1.38629
4154 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4155 36 3.23147 4.00602 0.07995 3.95644 36 - -
4156 1.38629 1.38629 1.38629 1.38629
4157 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4158 37 3.23147 4.00602 0.07995 3.95644 37 - -
4159 1.38629 1.38629 1.38629 1.38629
4160 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4161 38 3.25886 2.10105 3.30452 0.21999 38 - -
4162 1.38629 1.38629 1.38629 1.38629
4163 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4164 39 3.23147 4.00602 0.07995 3.95644 39 - -
4165 1.38629 1.38629 1.38629 1.38629
4166 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4167 40 3.54765 2.88869 3.57783 0.11921 40 - -
4168 1.38629 1.38629 1.38629 1.38629
4169 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4170 41 3.91828 0.08456 3.94536 3.17332 41 - -
4171 1.38629 1.38629 1.38629 1.38629
4172 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4173 42 0.16564 3.56007 2.37153 3.47792 42 - -
4174 1.38629 1.38629 1.38629 1.38629
4175 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4176 43 3.91828 0.08456 3.94536 3.17332 43 - -
4177 1.38629 1.38629 1.38629 1.38629
4178 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4179 44 0.45840 2.95212 1.36221 2.82373 44 - -
4180 1.38629 1.38629 1.38629 1.38629
4181 0.02782 4.28888 4.28888 1.46634 0.26236 1.09861 0.40547
4182 45 2.48432 0.20130 3.26267 2.80243 45 - -
4183 1.38629 1.38629 1.38629 1.38629
4184 0.01401 4.27507 * 1.46634 0.26236 0.00000 *
4185 //
4186 HMMER3/b [3.0 | March 2010]
4187 NAME 3_End_Tracheophyta_58S_end_fourteenc_long
4188 LENG 45
4189 ALPH DNA
4190 RF no
4191 CS no
4192 MAP yes
4193 DATE Sat Feb 18 00:58:51 2012
4194 NSEQ 76
4195 EFFN 3.576416
4196 CKSUM 815551676
4197 STATS LOCAL MSV -7.3595 0.71933
4198 STATS LOCAL VITERBI -7.6264 0.71933
4199 STATS LOCAL FORWARD -3.7388 0.71933
4200 HMM A C G T
4201 m->m m->i m->d i->m i->i d->m d->d
4202 COMPO 1.71585 1.10671 1.18523 1.69354
4203 1.38629 1.38629 1.38629 1.38629
4204 0.03524 4.05637 4.05637 1.46634 0.26236 0.00000 *
4205 1 3.00112 3.66619 0.10893 3.57914 1 - -
4206 1.38629 1.38629 1.38629 1.38629
4207 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4208 2 3.52263 0.12002 3.56821 2.89372 2 - -
4209 1.38629 1.38629 1.38629 1.38629
4210 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4211 3 3.52263 0.12002 3.56821 2.89372 3 - -
4212 1.38629 1.38629 1.38629 1.38629
4213 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4214 4 3.33822 0.15991 3.39007 2.54371 4 - -
4215 1.38629 1.38629 1.38629 1.38629
4216 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4217 5 2.76693 0.29348 2.48446 2.22463 5 - -
4218 1.38629 1.38629 1.38629 1.38629
4219 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4220 6 0.13203 3.45816 2.85229 3.36731 6 - -
4221 1.38629 1.38629 1.38629 1.38629
4222 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4223 7 0.13203 3.45816 2.85229 3.36731 7 - -
4224 1.38629 1.38629 1.38629 1.38629
4225 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4226 8 2.79755 3.57585 0.12743 3.48359 8 - -
4227 1.38629 1.38629 1.38629 1.38629
4228 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4229 9 3.52263 0.12002 3.56821 2.89372 9 - -
4230 1.38629 1.38629 1.38629 1.38629
4231 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4232 10 3.52263 0.12002 3.56821 2.89372 10 - -
4233 1.38629 1.38629 1.38629 1.38629
4234 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4235 11 2.35672 2.47836 2.82474 0.27172 11 - -
4236 1.38629 1.38629 1.38629 1.38629
4237 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4238 12 2.35672 2.47836 2.82474 0.27172 12 - -
4239 1.38629 1.38629 1.38629 1.38629
4240 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4241 13 3.04627 0.24542 3.10719 2.07654 13 - -
4242 1.38629 1.38629 1.38629 1.38629
4243 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4244 14 2.03581 2.24688 2.01567 0.46130 14 - -
4245 1.38629 1.38629 1.38629 1.38629
4246 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4247 15 3.00112 3.66619 0.10893 3.57914 15 - -
4248 1.38629 1.38629 1.38629 1.38629
4249 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4250 16 3.00112 3.66619 0.10893 3.57914 16 - -
4251 1.38629 1.38629 1.38629 1.38629
4252 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4253 17 3.35009 0.15709 3.40153 2.56431 17 - -
4254 1.38629 1.38629 1.38629 1.38629
4255 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4256 18 3.33595 0.16045 3.38788 2.53979 18 - -
4257 1.38629 1.38629 1.38629 1.38629
4258 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4259 19 2.83488 3.59354 0.12369 3.50246 19 - -
4260 1.38629 1.38629 1.38629 1.38629
4261 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4262 20 0.13203 3.45816 2.85229 3.36731 20 - -
4263 1.38629 1.38629 1.38629 1.38629
4264 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4265 21 3.00112 3.66619 0.10893 3.57914 21 - -
4266 1.38629 1.38629 1.38629 1.38629
4267 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4268 22 3.00112 3.66619 0.10893 3.57914 22 - -
4269 1.38629 1.38629 1.38629 1.38629
4270 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4271 23 3.00112 3.66619 0.10893 3.57914 23 - -
4272 1.38629 1.38629 1.38629 1.38629
4273 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4274 24 3.52263 0.12002 3.56821 2.89372 24 - -
4275 1.38629 1.38629 1.38629 1.38629
4276 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4277 25 0.13203 3.45816 2.85229 3.36731 25 - -
4278 1.38629 1.38629 1.38629 1.38629
4279 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4280 26 3.52263 0.12002 3.56821 2.89372 26 - -
4281 1.38629 1.38629 1.38629 1.38629
4282 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4283 27 3.00112 3.66619 0.10893 3.57914 27 - -
4284 1.38629 1.38629 1.38629 1.38629
4285 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4286 28 3.16795 2.64551 3.21304 0.16640 28 - -
4287 1.38629 1.38629 1.38629 1.38629
4288 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4289 29 3.52263 0.12002 3.56821 2.89372 29 - -
4290 1.38629 1.38629 1.38629 1.38629
4291 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4292 30 3.16795 2.64551 3.21304 0.16640 30 - -
4293 1.38629 1.38629 1.38629 1.38629
4294 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4295 31 3.00112 3.66619 0.10893 3.57914 31 - -
4296 1.38629 1.38629 1.38629 1.38629
4297 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4298 32 3.52263 0.12002 3.56821 2.89372 32 - -
4299 1.38629 1.38629 1.38629 1.38629
4300 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4301 33 3.52263 0.12002 3.56821 2.89372 33 - -
4302 1.38629 1.38629 1.38629 1.38629
4303 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4304 34 3.16795 2.64551 3.21304 0.16640 34 - -
4305 1.38629 1.38629 1.38629 1.38629
4306 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4307 35 3.00112 3.66619 0.10893 3.57914 35 - -
4308 1.38629 1.38629 1.38629 1.38629
4309 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4310 36 3.00112 3.66619 0.10893 3.57914 36 - -
4311 1.38629 1.38629 1.38629 1.38629
4312 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4313 37 3.00112 3.66619 0.10893 3.57914 37 - -
4314 1.38629 1.38629 1.38629 1.38629
4315 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4316 38 2.95253 2.14756 3.00617 0.24649 38 - -
4317 1.38629 1.38629 1.38629 1.38629
4318 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4319 39 3.00112 3.66619 0.10893 3.57914 39 - -
4320 1.38629 1.38629 1.38629 1.38629
4321 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4322 40 3.16795 2.64551 3.21304 0.16640 40 - -
4323 1.38629 1.38629 1.38629 1.38629
4324 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4325 41 3.52263 0.12002 3.56821 2.89372 41 - -
4326 1.38629 1.38629 1.38629 1.38629
4327 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4328 42 0.13203 3.45816 2.85229 3.36731 42 - -
4329 1.38629 1.38629 1.38629 1.38629
4330 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4331 43 3.52263 0.12002 3.56821 2.89372 43 - -
4332 1.38629 1.38629 1.38629 1.38629
4333 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4334 44 0.13203 3.45816 2.85229 3.36731 44 - -
4335 1.38629 1.38629 1.38629 1.38629
4336 0.03524 4.05637 4.05637 1.46634 0.26236 1.09861 0.40547
4337 45 0.22308 2.59280 2.65587 2.90222 45 - -
4338 1.38629 1.38629 1.38629 1.38629
4339 0.01777 4.03891 * 1.46634 0.26236 0.00000 *
4340 //
4341 HMMER3/b [3.0 | March 2010]
4342 NAME 3_End_Tracheophyta_58S_end_nine_long
4343 LENG 45
4344 ALPH DNA
4345 RF no
4346 CS no
4347 MAP yes
4348 DATE Sat Feb 18 00:57:25 2012
4349 NSEQ 19
4350 EFFN 3.604248
4351 CKSUM 3064978032
4352 STATS LOCAL MSV -7.4838 0.71932
4353 STATS LOCAL VITERBI -7.7664 0.71932
4354 STATS LOCAL FORWARD -4.0255 0.71932
4355 HMM A C G T
4356 m->m m->i m->d i->m i->i d->m d->d
4357 COMPO 1.74205 1.14988 1.13928 1.67071
4358 1.38629 1.38629 1.38629 1.38629
4359 0.03507 4.06117 4.06117 1.46634 0.26236 0.00000 *
4360 1 3.00664 3.67433 0.10811 3.58816 1 - -
4361 1.38629 1.38629 1.38629 1.38629
4362 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4363 2 3.53197 0.11901 3.57713 2.90043 2 - -
4364 1.38629 1.38629 1.38629 1.38629
4365 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4366 3 3.53197 0.11901 3.57713 2.90043 3 - -
4367 1.38629 1.38629 1.38629 1.38629
4368 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4369 4 3.10101 0.22787 3.16041 2.15106 4 - -
4370 1.38629 1.38629 1.38629 1.38629
4371 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4372 5 3.00664 3.67433 0.10811 3.58816 5 - -
4373 1.38629 1.38629 1.38629 1.38629
4374 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4375 6 0.13104 3.46632 2.85754 3.37625 6 - -
4376 1.38629 1.38629 1.38629 1.38629
4377 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4378 7 0.13104 3.46632 2.85754 3.37625 7 - -
4379 1.38629 1.38629 1.38629 1.38629
4380 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4381 8 0.57908 2.63204 1.25561 2.49191 8 - -
4382 1.38629 1.38629 1.38629 1.38629
4383 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4384 9 3.53197 0.11901 3.57713 2.90043 9 - -
4385 1.38629 1.38629 1.38629 1.38629
4386 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4387 10 3.53197 0.11901 3.57713 2.90043 10 - -
4388 1.38629 1.38629 1.38629 1.38629
4389 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4390 11 0.13104 3.46632 2.85754 3.37625 11 - -
4391 1.38629 1.38629 1.38629 1.38629
4392 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4393 12 2.48868 1.14773 2.55863 0.64968 12 - -
4394 1.38629 1.38629 1.38629 1.38629
4395 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4396 13 3.17633 2.65083 3.22110 0.16516 13 - -
4397 1.38629 1.38629 1.38629 1.38629
4398 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4399 14 2.67716 0.44679 2.74640 1.48101 14 - -
4400 1.38629 1.38629 1.38629 1.38629
4401 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4402 15 3.00664 3.67433 0.10811 3.58816 15 - -
4403 1.38629 1.38629 1.38629 1.38629
4404 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4405 16 3.00664 3.67433 0.10811 3.58816 16 - -
4406 1.38629 1.38629 1.38629 1.38629
4407 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4408 17 3.17633 2.65083 3.22110 0.16516 17 - -
4409 1.38629 1.38629 1.38629 1.38629
4410 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4411 18 3.17633 2.65083 3.22110 0.16516 18 - -
4412 1.38629 1.38629 1.38629 1.38629
4413 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4414 19 3.00664 3.67433 0.10811 3.58816 19 - -
4415 1.38629 1.38629 1.38629 1.38629
4416 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4417 20 0.13104 3.46632 2.85754 3.37625 20 - -
4418 1.38629 1.38629 1.38629 1.38629
4419 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4420 21 1.40422 2.73373 0.48649 2.59447 21 - -
4421 1.38629 1.38629 1.38629 1.38629
4422 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4423 22 3.00664 3.67433 0.10811 3.58816 22 - -
4424 1.38629 1.38629 1.38629 1.38629
4425 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4426 23 3.00664 3.67433 0.10811 3.58816 23 - -
4427 1.38629 1.38629 1.38629 1.38629
4428 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4429 24 3.53197 0.11901 3.57713 2.90043 24 - -
4430 1.38629 1.38629 1.38629 1.38629
4431 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4432 25 0.13104 3.46632 2.85754 3.37625 25 - -
4433 1.38629 1.38629 1.38629 1.38629
4434 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4435 26 3.53197 0.11901 3.57713 2.90043 26 - -
4436 1.38629 1.38629 1.38629 1.38629
4437 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4438 27 3.00664 3.67433 0.10811 3.58816 27 - -
4439 1.38629 1.38629 1.38629 1.38629
4440 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4441 28 3.17633 2.65083 3.22110 0.16516 28 - -
4442 1.38629 1.38629 1.38629 1.38629
4443 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4444 29 3.53197 0.11901 3.57713 2.90043 29 - -
4445 1.38629 1.38629 1.38629 1.38629
4446 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4447 30 3.17633 2.65083 3.22110 0.16516 30 - -
4448 1.38629 1.38629 1.38629 1.38629
4449 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4450 31 3.00664 3.67433 0.10811 3.58816 31 - -
4451 1.38629 1.38629 1.38629 1.38629
4452 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4453 32 3.53197 0.11901 3.57713 2.90043 32 - -
4454 1.38629 1.38629 1.38629 1.38629
4455 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4456 33 3.53197 0.11901 3.57713 2.90043 33 - -
4457 1.38629 1.38629 1.38629 1.38629
4458 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4459 34 3.17633 2.65083 3.22110 0.16516 34 - -
4460 1.38629 1.38629 1.38629 1.38629
4461 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4462 35 3.00664 3.67433 0.10811 3.58816 35 - -
4463 1.38629 1.38629 1.38629 1.38629
4464 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4465 36 3.00664 3.67433 0.10811 3.58816 36 - -
4466 1.38629 1.38629 1.38629 1.38629
4467 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4468 37 3.00664 3.67433 0.10811 3.58816 37 - -
4469 1.38629 1.38629 1.38629 1.38629
4470 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4471 38 3.53197 0.11901 3.57713 2.90043 38 - -
4472 1.38629 1.38629 1.38629 1.38629
4473 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4474 39 3.00664 3.67433 0.10811 3.58816 39 - -
4475 1.38629 1.38629 1.38629 1.38629
4476 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4477 40 3.17633 2.65083 3.22110 0.16516 40 - -
4478 1.38629 1.38629 1.38629 1.38629
4479 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4480 41 3.53197 0.11901 3.57713 2.90043 41 - -
4481 1.38629 1.38629 1.38629 1.38629
4482 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4483 42 0.13104 3.46632 2.85754 3.37625 42 - -
4484 1.38629 1.38629 1.38629 1.38629
4485 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4486 43 3.53197 0.11901 3.57713 2.90043 43 - -
4487 1.38629 1.38629 1.38629 1.38629
4488 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4489 44 3.00664 3.67433 0.10811 3.58816 44 - -
4490 1.38629 1.38629 1.38629 1.38629
4491 0.03507 4.06117 4.06117 1.46634 0.26236 1.09861 0.40547
4492 45 3.53197 0.11901 3.57713 2.90043 45 - -
4493 1.38629 1.38629 1.38629 1.38629
4494 0.01769 4.04380 * 1.46634 0.26236 0.00000 *
4495 //
4496 HMMER3/b [3.0 | March 2010]
4497 NAME 3_End_Tracheophyta_58S_end_nineteena_long
4498 LENG 45
4499 ALPH DNA
4500 RF no
4501 CS no
4502 MAP yes
4503 DATE Sat Feb 18 01:02:03 2012
4504 NSEQ 28
4505 EFFN 3.394043
4506 CKSUM 1268754513
4507 STATS LOCAL MSV -7.3768 0.71932
4508 STATS LOCAL VITERBI -7.8823 0.71932
4509 STATS LOCAL FORWARD -3.6277 0.71932
4510 HMM A C G T
4511 m->m m->i m->d i->m i->i d->m d->d
4512 COMPO 1.89704 1.12183 1.05905 1.72866
4513 1.38629 1.38629 1.38629 1.38629
4514 0.03641 4.02429 4.02429 1.46634 0.26236 0.00000 *
4515 1 2.96321 3.61061 0.11469 3.51767 1 - -
4516 1.38629 1.38629 1.38629 1.38629
4517 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4518 2 3.45911 0.12715 3.50746 2.84789 2 - -
4519 1.38629 1.38629 1.38629 1.38629
4520 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4521 3 3.45911 0.12715 3.50746 2.84789 3 - -
4522 1.38629 1.38629 1.38629 1.38629
4523 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4524 4 3.45911 0.12715 3.50746 2.84789 4 - -
4525 1.38629 1.38629 1.38629 1.38629
4526 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4527 5 2.96321 3.61061 0.11469 3.51767 5 - -
4528 1.38629 1.38629 1.38629 1.38629
4529 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4530 6 0.13895 3.40284 2.81657 3.30665 6 - -
4531 1.38629 1.38629 1.38629 1.38629
4532 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4533 7 2.96321 3.61061 0.11469 3.51767 7 - -
4534 1.38629 1.38629 1.38629 1.38629
4535 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4536 8 2.96321 3.61061 0.11469 3.51767 8 - -
4537 1.38629 1.38629 1.38629 1.38629
4538 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4539 9 3.45911 0.12715 3.50746 2.84789 9 - -
4540 1.38629 1.38629 1.38629 1.38629
4541 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4542 10 3.11146 2.60966 3.15874 0.17504 10 - -
4543 1.38629 1.38629 1.38629 1.38629
4544 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4545 11 0.13895 3.40284 2.81657 3.30665 11 - -
4546 1.38629 1.38629 1.38629 1.38629
4547 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4548 12 3.11146 2.60966 3.15874 0.17504 12 - -
4549 1.38629 1.38629 1.38629 1.38629
4550 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4551 13 2.42392 1.02380 2.49546 0.75557 13 - -
4552 1.38629 1.38629 1.38629 1.38629
4553 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4554 14 3.11146 2.60966 3.15874 0.17504 14 - -
4555 1.38629 1.38629 1.38629 1.38629
4556 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4557 15 2.96321 3.61061 0.11469 3.51767 15 - -
4558 1.38629 1.38629 1.38629 1.38629
4559 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4560 16 2.96321 3.61061 0.11469 3.51767 16 - -
4561 1.38629 1.38629 1.38629 1.38629
4562 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4563 17 3.45911 0.12715 3.50746 2.84789 17 - -
4564 1.38629 1.38629 1.38629 1.38629
4565 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4566 18 3.45911 0.12715 3.50746 2.84789 18 - -
4567 1.38629 1.38629 1.38629 1.38629
4568 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4569 19 1.14671 2.58217 0.65511 2.43811 19 - -
4570 1.38629 1.38629 1.38629 1.38629
4571 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4572 20 0.13895 3.40284 2.81657 3.30665 20 - -
4573 1.38629 1.38629 1.38629 1.38629
4574 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4575 21 2.96321 3.61061 0.11469 3.51767 21 - -
4576 1.38629 1.38629 1.38629 1.38629
4577 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4578 22 2.96321 3.61061 0.11469 3.51767 22 - -
4579 1.38629 1.38629 1.38629 1.38629
4580 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4581 23 2.96321 3.61061 0.11469 3.51767 23 - -
4582 1.38629 1.38629 1.38629 1.38629
4583 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4584 24 3.45911 0.12715 3.50746 2.84789 24 - -
4585 1.38629 1.38629 1.38629 1.38629
4586 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4587 25 0.13895 3.40284 2.81657 3.30665 25 - -
4588 1.38629 1.38629 1.38629 1.38629
4589 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4590 26 3.45911 0.12715 3.50746 2.84789 26 - -
4591 1.38629 1.38629 1.38629 1.38629
4592 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4593 27 2.96321 3.61061 0.11469 3.51767 27 - -
4594 1.38629 1.38629 1.38629 1.38629
4595 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4596 28 3.45911 0.12715 3.50746 2.84789 28 - -
4597 1.38629 1.38629 1.38629 1.38629
4598 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4599 29 3.45911 0.12715 3.50746 2.84789 29 - -
4600 1.38629 1.38629 1.38629 1.38629
4601 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4602 30 3.11146 2.60966 3.15874 0.17504 30 - -
4603 1.38629 1.38629 1.38629 1.38629
4604 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4605 31 2.96321 3.61061 0.11469 3.51767 31 - -
4606 1.38629 1.38629 1.38629 1.38629
4607 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4608 32 3.45911 0.12715 3.50746 2.84789 32 - -
4609 1.38629 1.38629 1.38629 1.38629
4610 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4611 33 3.45911 0.12715 3.50746 2.84789 33 - -
4612 1.38629 1.38629 1.38629 1.38629
4613 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4614 34 3.11146 2.60966 3.15874 0.17504 34 - -
4615 1.38629 1.38629 1.38629 1.38629
4616 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4617 35 2.96321 3.61061 0.11469 3.51767 35 - -
4618 1.38629 1.38629 1.38629 1.38629
4619 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4620 36 2.96321 3.61061 0.11469 3.51767 36 - -
4621 1.38629 1.38629 1.38629 1.38629
4622 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4623 37 2.96321 3.61061 0.11469 3.51767 37 - -
4624 1.38629 1.38629 1.38629 1.38629
4625 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4626 38 3.45911 0.12715 3.50746 2.84789 38 - -
4627 1.38629 1.38629 1.38629 1.38629
4628 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4629 39 2.96321 3.61061 0.11469 3.51767 39 - -
4630 1.38629 1.38629 1.38629 1.38629
4631 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4632 40 3.11146 2.60966 3.15874 0.17504 40 - -
4633 1.38629 1.38629 1.38629 1.38629
4634 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4635 41 3.45911 0.12715 3.50746 2.84789 41 - -
4636 1.38629 1.38629 1.38629 1.38629
4637 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4638 42 0.13895 3.40284 2.81657 3.30665 42 - -
4639 1.38629 1.38629 1.38629 1.38629
4640 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4641 43 2.56629 1.46611 2.63304 0.47723 43 - -
4642 1.38629 1.38629 1.38629 1.38629
4643 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4644 44 2.96321 3.61061 0.11469 3.51767 44 - -
4645 1.38629 1.38629 1.38629 1.38629
4646 0.03641 4.02429 4.02429 1.46634 0.26236 1.09861 0.40547
4647 45 3.45911 0.12715 3.50746 2.84789 45 - -
4648 1.38629 1.38629 1.38629 1.38629
4649 0.01837 4.00625 * 1.46634 0.26236 0.00000 *
4650 //
4651 HMMER3/b [3.0 | March 2010]
4652 NAME 3_End_Tracheophyta_58S_end_nineteenb_long
4653 LENG 45
4654 ALPH DNA
4655 RF no
4656 CS no
4657 MAP yes
4658 DATE Sat Feb 18 01:02:11 2012
4659 NSEQ 23
4660 EFFN 3.433716
4661 CKSUM 1681062768
4662 STATS LOCAL MSV -7.2331 0.71933
4663 STATS LOCAL VITERBI -7.7346 0.71933
4664 STATS LOCAL FORWARD -3.7798 0.71933
4665 HMM A C G T
4666 m->m m->i m->d i->m i->i d->m d->d
4667 COMPO 1.81746 1.11882 1.08211 1.76016
4668 1.38629 1.38629 1.38629 1.38629
4669 0.03615 4.03135 4.03135 1.46634 0.26236 0.00000 *
4670 1 2.97172 3.62305 0.11337 3.53141 1 - -
4671 1.38629 1.38629 1.38629 1.38629
4672 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4673 2 3.47328 0.12552 3.52102 2.85815 2 - -
4674 1.38629 1.38629 1.38629 1.38629
4675 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4676 3 3.47328 0.12552 3.52102 2.85815 3 - -
4677 1.38629 1.38629 1.38629 1.38629
4678 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4679 4 3.47328 0.12552 3.52102 2.85815 4 - -
4680 1.38629 1.38629 1.38629 1.38629
4681 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4682 5 2.43175 0.82289 2.50402 0.93853 5 - -
4683 1.38629 1.38629 1.38629 1.38629
4684 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4685 6 0.13737 3.41516 2.82454 3.32015 6 - -
4686 1.38629 1.38629 1.38629 1.38629
4687 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4688 7 0.13737 3.41516 2.82454 3.32015 7 - -
4689 1.38629 1.38629 1.38629 1.38629
4690 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4691 8 2.97172 3.62305 0.11337 3.53141 8 - -
4692 1.38629 1.38629 1.38629 1.38629
4693 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4694 9 3.47328 0.12552 3.52102 2.85815 9 - -
4695 1.38629 1.38629 1.38629 1.38629
4696 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4697 10 3.47328 0.12552 3.52102 2.85815 10 - -
4698 1.38629 1.38629 1.38629 1.38629
4699 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4700 11 2.97172 3.62305 0.11337 3.53141 11 - -
4701 1.38629 1.38629 1.38629 1.38629
4702 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4703 12 3.12398 2.61761 3.17077 0.17308 12 - -
4704 1.38629 1.38629 1.38629 1.38629
4705 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4706 13 3.07935 0.19490 2.81068 2.64608 13 - -
4707 1.38629 1.38629 1.38629 1.38629
4708 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4709 14 0.13737 3.41516 2.82454 3.32015 14 - -
4710 1.38629 1.38629 1.38629 1.38629
4711 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4712 15 2.97172 3.62305 0.11337 3.53141 15 - -
4713 1.38629 1.38629 1.38629 1.38629
4714 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4715 16 2.97172 3.62305 0.11337 3.53141 16 - -
4716 1.38629 1.38629 1.38629 1.38629
4717 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4718 17 2.54959 0.55101 2.62082 1.29912 17 - -
4719 1.38629 1.38629 1.38629 1.38629
4720 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4721 18 2.56939 0.52704 2.64034 1.34043 18 - -
4722 1.38629 1.38629 1.38629 1.38629
4723 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4724 19 2.97172 3.62305 0.11337 3.53141 19 - -
4725 1.38629 1.38629 1.38629 1.38629
4726 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4727 20 0.13737 3.41516 2.82454 3.32015 20 - -
4728 1.38629 1.38629 1.38629 1.38629
4729 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4730 21 2.97172 3.62305 0.11337 3.53141 21 - -
4731 1.38629 1.38629 1.38629 1.38629
4732 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4733 22 2.97172 3.62305 0.11337 3.53141 22 - -
4734 1.38629 1.38629 1.38629 1.38629
4735 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4736 23 2.97172 3.62305 0.11337 3.53141 23 - -
4737 1.38629 1.38629 1.38629 1.38629
4738 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4739 24 3.47328 0.12552 3.52102 2.85815 24 - -
4740 1.38629 1.38629 1.38629 1.38629
4741 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4742 25 0.13737 3.41516 2.82454 3.32015 25 - -
4743 1.38629 1.38629 1.38629 1.38629
4744 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4745 26 3.47328 0.12552 3.52102 2.85815 26 - -
4746 1.38629 1.38629 1.38629 1.38629
4747 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4748 27 2.97172 3.62305 0.11337 3.53141 27 - -
4749 1.38629 1.38629 1.38629 1.38629
4750 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4751 28 3.47328 0.12552 3.52102 2.85815 28 - -
4752 1.38629 1.38629 1.38629 1.38629
4753 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4754 29 3.12398 2.61761 3.17077 0.17308 29 - -
4755 1.38629 1.38629 1.38629 1.38629
4756 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4757 30 3.12398 2.61761 3.17077 0.17308 30 - -
4758 1.38629 1.38629 1.38629 1.38629
4759 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4760 31 2.97172 3.62305 0.11337 3.53141 31 - -
4761 1.38629 1.38629 1.38629 1.38629
4762 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4763 32 3.47328 0.12552 3.52102 2.85815 32 - -
4764 1.38629 1.38629 1.38629 1.38629
4765 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4766 33 3.47328 0.12552 3.52102 2.85815 33 - -
4767 1.38629 1.38629 1.38629 1.38629
4768 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4769 34 3.12398 2.61761 3.17077 0.17308 34 - -
4770 1.38629 1.38629 1.38629 1.38629
4771 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4772 35 2.97172 3.62305 0.11337 3.53141 35 - -
4773 1.38629 1.38629 1.38629 1.38629
4774 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4775 36 2.97172 3.62305 0.11337 3.53141 36 - -
4776 1.38629 1.38629 1.38629 1.38629
4777 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4778 37 2.97172 3.62305 0.11337 3.53141 37 - -
4779 1.38629 1.38629 1.38629 1.38629
4780 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4781 38 3.12398 2.61761 3.17077 0.17308 38 - -
4782 1.38629 1.38629 1.38629 1.38629
4783 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4784 39 2.97172 3.62305 0.11337 3.53141 39 - -
4785 1.38629 1.38629 1.38629 1.38629
4786 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4787 40 3.12398 2.61761 3.17077 0.17308 40 - -
4788 1.38629 1.38629 1.38629 1.38629
4789 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4790 41 3.47328 0.12552 3.52102 2.85815 41 - -
4791 1.38629 1.38629 1.38629 1.38629
4792 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4793 42 0.13737 3.41516 2.82454 3.32015 42 - -
4794 1.38629 1.38629 1.38629 1.38629
4795 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4796 43 3.47328 0.12552 3.52102 2.85815 43 - -
4797 1.38629 1.38629 1.38629 1.38629
4798 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4799 44 2.97172 3.62305 0.11337 3.53141 44 - -
4800 1.38629 1.38629 1.38629 1.38629
4801 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547
4802 45 3.47328 0.12552 3.52102 2.85815 45 - -
4803 1.38629 1.38629 1.38629 1.38629
4804 0.01824 4.01344 * 1.46634 0.26236 0.00000 *
4805 //
4806 HMMER3/b [3.0 | March 2010]
4807 NAME 3_End_Tracheophyta_58S_end_nineteenc_long
4808 LENG 45
4809 ALPH DNA
4810 RF no
4811 CS no
4812 MAP yes
4813 DATE Sat Feb 18 01:02:26 2012
4814 NSEQ 7
4815 EFFN 3.052246
4816 CKSUM 1936706614
4817 STATS LOCAL MSV -8.1766 0.71933
4818 STATS LOCAL VITERBI -7.8521 0.71933
4819 STATS LOCAL FORWARD -3.2521 0.71933
4820 HMM A C G T
4821 m->m m->i m->d i->m i->i d->m d->d
4822 COMPO 1.93182 1.01394 1.09971 1.83657
4823 1.38629 1.38629 1.38629 1.38629
4824 0.03882 3.96124 3.96124 1.46634 0.26236 0.00000 *
4825 1 2.88322 3.49501 0.12784 3.39028 1 - -
4826 1.38629 1.38629 1.38629 1.38629
4827 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4828 2 3.32843 0.14342 3.38220 2.75214 2 - -
4829 1.38629 1.38629 1.38629 1.38629
4830 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4831 3 3.32843 0.14342 3.38220 2.75214 3 - -
4832 1.38629 1.38629 1.38629 1.38629
4833 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4834 4 3.32843 0.14342 3.38220 2.75214 4 - -
4835 1.38629 1.38629 1.38629 1.38629
4836 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4837 5 3.32843 0.14342 3.38220 2.75214 5 - -
4838 1.38629 1.38629 1.38629 1.38629
4839 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4840 6 0.15447 3.28965 2.74264 3.18289 6 - -
4841 1.38629 1.38629 1.38629 1.38629
4842 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4843 7 0.15447 3.28965 2.74264 3.18289 7 - -
4844 1.38629 1.38629 1.38629 1.38629
4845 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4846 8 2.88322 3.49501 0.12784 3.39028 8 - -
4847 1.38629 1.38629 1.38629 1.38629
4848 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4849 9 3.32843 0.14342 3.38220 2.75214 9 - -
4850 1.38629 1.38629 1.38629 1.38629
4851 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4852 10 3.32843 0.14342 3.38220 2.75214 10 - -
4853 1.38629 1.38629 1.38629 1.38629
4854 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4855 11 2.99804 2.53734 3.04961 0.19400 11 - -
4856 1.38629 1.38629 1.38629 1.38629
4857 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4858 12 2.99804 2.53734 3.04961 0.19400 12 - -
4859 1.38629 1.38629 1.38629 1.38629
4860 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4861 13 3.32843 0.14342 3.38220 2.75214 13 - -
4862 1.38629 1.38629 1.38629 1.38629
4863 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4864 14 2.88322 3.49501 0.12784 3.39028 14 - -
4865 1.38629 1.38629 1.38629 1.38629
4866 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4867 15 2.88322 3.49501 0.12784 3.39028 15 - -
4868 1.38629 1.38629 1.38629 1.38629
4869 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4870 16 2.88322 3.49501 0.12784 3.39028 16 - -
4871 1.38629 1.38629 1.38629 1.38629
4872 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4873 17 3.32843 0.14342 3.38220 2.75214 17 - -
4874 1.38629 1.38629 1.38629 1.38629
4875 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4876 18 3.32843 0.14342 3.38220 2.75214 18 - -
4877 1.38629 1.38629 1.38629 1.38629
4878 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4879 19 2.88322 3.49501 0.12784 3.39028 19 - -
4880 1.38629 1.38629 1.38629 1.38629
4881 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4882 20 0.15447 3.28965 2.74264 3.18289 20 - -
4883 1.38629 1.38629 1.38629 1.38629
4884 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4885 21 2.88322 3.49501 0.12784 3.39028 21 - -
4886 1.38629 1.38629 1.38629 1.38629
4887 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4888 22 2.88322 3.49501 0.12784 3.39028 22 - -
4889 1.38629 1.38629 1.38629 1.38629
4890 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4891 23 2.88322 3.49501 0.12784 3.39028 23 - -
4892 1.38629 1.38629 1.38629 1.38629
4893 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4894 24 3.32843 0.14342 3.38220 2.75214 24 - -
4895 1.38629 1.38629 1.38629 1.38629
4896 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4897 25 0.15447 3.28965 2.74264 3.18289 25 - -
4898 1.38629 1.38629 1.38629 1.38629
4899 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4900 26 3.32843 0.14342 3.38220 2.75214 26 - -
4901 1.38629 1.38629 1.38629 1.38629
4902 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4903 27 2.88322 3.49501 0.12784 3.39028 27 - -
4904 1.38629 1.38629 1.38629 1.38629
4905 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4906 28 3.32843 0.14342 3.38220 2.75214 28 - -
4907 1.38629 1.38629 1.38629 1.38629
4908 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4909 29 2.99804 2.53734 3.04961 0.19400 29 - -
4910 1.38629 1.38629 1.38629 1.38629
4911 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4912 30 2.99804 2.53734 3.04961 0.19400 30 - -
4913 1.38629 1.38629 1.38629 1.38629
4914 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4915 31 2.88322 3.49501 0.12784 3.39028 31 - -
4916 1.38629 1.38629 1.38629 1.38629
4917 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4918 32 3.32843 0.14342 3.38220 2.75214 32 - -
4919 1.38629 1.38629 1.38629 1.38629
4920 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4921 33 3.32843 0.14342 3.38220 2.75214 33 - -
4922 1.38629 1.38629 1.38629 1.38629
4923 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4924 34 2.99804 2.53734 3.04961 0.19400 34 - -
4925 1.38629 1.38629 1.38629 1.38629
4926 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4927 35 2.88322 3.49501 0.12784 3.39028 35 - -
4928 1.38629 1.38629 1.38629 1.38629
4929 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4930 36 2.88322 3.49501 0.12784 3.39028 36 - -
4931 1.38629 1.38629 1.38629 1.38629
4932 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4933 37 2.88322 3.49501 0.12784 3.39028 37 - -
4934 1.38629 1.38629 1.38629 1.38629
4935 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4936 38 3.32843 0.14342 3.38220 2.75214 38 - -
4937 1.38629 1.38629 1.38629 1.38629
4938 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4939 39 2.88322 3.49501 0.12784 3.39028 39 - -
4940 1.38629 1.38629 1.38629 1.38629
4941 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4942 40 2.99804 2.53734 3.04961 0.19400 40 - -
4943 1.38629 1.38629 1.38629 1.38629
4944 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4945 41 3.32843 0.14342 3.38220 2.75214 41 - -
4946 1.38629 1.38629 1.38629 1.38629
4947 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4948 42 0.15447 3.28965 2.74264 3.18289 42 - -
4949 1.38629 1.38629 1.38629 1.38629
4950 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4951 43 3.32843 0.14342 3.38220 2.75214 43 - -
4952 1.38629 1.38629 1.38629 1.38629
4953 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4954 44 2.88322 3.49501 0.12784 3.39028 44 - -
4955 1.38629 1.38629 1.38629 1.38629
4956 0.03882 3.96124 3.96124 1.46634 0.26236 1.09861 0.40547
4957 45 3.32843 0.14342 3.38220 2.75214 45 - -
4958 1.38629 1.38629 1.38629 1.38629
4959 0.01960 3.94202 * 1.46634 0.26236 0.00000 *
4960 //
4961 HMMER3/b [3.0 | March 2010]
4962 NAME 3_End_Tracheophyta_58S_end_nineteend_long
4963 LENG 45
4964 ALPH DNA
4965 RF no
4966 CS no
4967 MAP yes
4968 DATE Sat Feb 18 01:02:37 2012
4969 NSEQ 856
4970 EFFN 5.554413
4971 CKSUM 733056095
4972 STATS LOCAL MSV -6.6456 0.71932
4973 STATS LOCAL VITERBI -7.5969 0.71932
4974 STATS LOCAL FORWARD -3.9880 0.71932
4975 HMM A C G T
4976 m->m m->i m->d i->m i->i d->m d->d
4977 COMPO 1.74504 1.15587 1.11456 1.70091
4978 1.38629 1.38629 1.38629 1.38629
4979 0.02613 4.35085 4.35085 1.46634 0.26236 0.00000 *
4980 1 3.23345 3.95902 0.09091 3.56135 1 - -
4981 1.38629 1.38629 1.38629 1.38629
4982 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4983 2 4.00514 0.07838 4.02816 3.23494 2 - -
4984 1.38629 1.38629 1.38629 1.38629
4985 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4986 3 3.96337 0.08642 3.98881 3.09507 3 - -
4987 1.38629 1.38629 1.38629 1.38629
4988 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4989 4 3.84642 0.10955 3.87859 2.78499 4 - -
4990 1.38629 1.38629 1.38629 1.38629
4991 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4992 5 1.61944 2.42984 0.45902 2.50057 5 - -
4993 1.38629 1.38629 1.38629 1.38629
4994 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4995 6 0.09745 3.86160 3.00225 3.81028 6 - -
4996 1.38629 1.38629 1.38629 1.38629
4997 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
4998 7 0.29717 2.86598 2.35447 2.25176 7 - -
4999 1.38629 1.38629 1.38629 1.38629
5000 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5001 8 2.97800 3.78889 0.10313 3.71027 8 - -
5002 1.38629 1.38629 1.38629 1.38629
5003 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5004 9 4.00514 0.07838 4.02816 3.23494 9 - -
5005 1.38629 1.38629 1.38629 1.38629
5006 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5007 10 3.95927 0.08721 3.98496 3.08242 10 - -
5008 1.38629 1.38629 1.38629 1.38629
5009 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5010 11 0.47869 2.44590 2.14476 1.73351 11 - -
5011 1.38629 1.38629 1.38629 1.38629
5012 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5013 12 3.53226 2.57566 3.56532 0.14344 12 - -
5014 1.38629 1.38629 1.38629 1.38629
5015 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5016 13 3.17703 2.21298 3.20717 0.21264 13 - -
5017 1.38629 1.38629 1.38629 1.38629
5018 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5019 14 0.48947 2.12807 2.31988 1.77374 14 - -
5020 1.38629 1.38629 1.38629 1.38629
5021 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5022 15 3.23908 3.63645 0.08938 3.91407 15 - -
5023 1.38629 1.38629 1.38629 1.38629
5024 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5025 16 3.28325 4.08014 0.07476 4.03840 16 - -
5026 1.38629 1.38629 1.38629 1.38629
5027 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5028 17 2.61871 0.71582 2.56034 1.01879 17 - -
5029 1.38629 1.38629 1.38629 1.38629
5030 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5031 18 2.79100 0.98435 2.85745 0.67818 18 - -
5032 1.38629 1.38629 1.38629 1.38629
5033 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5034 19 2.88958 3.91627 0.10528 3.71275 19 - -
5035 1.38629 1.38629 1.38629 1.38629
5036 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5037 20 0.10529 3.83285 2.89277 3.77822 20 - -
5038 1.38629 1.38629 1.38629 1.38629
5039 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5040 21 3.13578 4.04625 0.08257 4.00081 21 - -
5041 1.38629 1.38629 1.38629 1.38629
5042 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5043 22 3.28325 4.08014 0.07476 4.03840 22 - -
5044 1.38629 1.38629 1.38629 1.38629
5045 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5046 23 3.14551 4.04868 0.08201 4.00351 23 - -
5047 1.38629 1.38629 1.38629 1.38629
5048 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5049 24 4.00514 0.07838 4.02816 3.23494 24 - -
5050 1.38629 1.38629 1.38629 1.38629
5051 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5052 25 0.10009 3.59942 3.10949 3.75993 25 - -
5053 1.38629 1.38629 1.38629 1.38629
5054 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5055 26 3.91614 0.09562 3.94435 2.95832 26 - -
5056 1.38629 1.38629 1.38629 1.38629
5057 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5058 27 3.25566 3.77958 0.08388 3.95951 27 - -
5059 1.38629 1.38629 1.38629 1.38629
5060 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5061 28 2.83114 0.59636 2.89858 1.09321 28 - -
5062 1.38629 1.38629 1.38629 1.38629
5063 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5064 29 4.00514 0.07838 4.02816 3.23494 29 - -
5065 1.38629 1.38629 1.38629 1.38629
5066 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5067 30 3.27989 2.81282 3.53878 0.13550 30 - -
5068 1.38629 1.38629 1.38629 1.38629
5069 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5070 31 3.28325 4.08014 0.07476 4.03840 31 - -
5071 1.38629 1.38629 1.38629 1.38629
5072 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5073 32 4.00514 0.07838 4.02816 3.23494 32 - -
5074 1.38629 1.38629 1.38629 1.38629
5075 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5076 33 3.92955 0.09299 3.95697 2.99526 33 - -
5077 1.38629 1.38629 1.38629 1.38629
5078 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5079 34 3.60551 2.81966 3.63419 0.12014 34 - -
5080 1.38629 1.38629 1.38629 1.38629
5081 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5082 35 3.14615 4.04883 0.08198 4.00369 35 - -
5083 1.38629 1.38629 1.38629 1.38629
5084 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5085 36 3.28325 4.08014 0.07476 4.03840 36 - -
5086 1.38629 1.38629 1.38629 1.38629
5087 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5088 37 3.28325 4.08014 0.07476 4.03840 37 - -
5089 1.38629 1.38629 1.38629 1.38629
5090 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5091 38 3.12209 1.65978 3.17582 0.32297 38 - -
5092 1.38629 1.38629 1.38629 1.38629
5093 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5094 39 3.28325 4.08014 0.07476 4.03840 39 - -
5095 1.38629 1.38629 1.38629 1.38629
5096 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5097 40 3.63936 2.94947 3.66605 0.11005 40 - -
5098 1.38629 1.38629 1.38629 1.38629
5099 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5100 41 3.91395 0.09096 3.78906 3.11522 41 - -
5101 1.38629 1.38629 1.38629 1.38629
5102 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5103 42 0.11267 3.77567 2.89076 3.57194 42 - -
5104 1.38629 1.38629 1.38629 1.38629
5105 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5106 43 3.71094 0.09575 3.91271 3.06052 43 - -
5107 1.38629 1.38629 1.38629 1.38629
5108 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5109 44 0.69515 2.09592 1.51651 1.84157 44 - -
5110 1.38629 1.38629 1.38629 1.38629
5111 0.02613 4.35085 4.35085 1.46634 0.26236 1.09861 0.40547
5112 45 1.71415 0.62668 2.27327 1.70075 45 - -
5113 1.38629 1.38629 1.38629 1.38629
5114 0.01315 4.33787 * 1.46634 0.26236 0.00000 *
5115 //
5116 HMMER3/b [3.0 | March 2010]
5117 NAME 3_End_Tracheophyta_58S_end_one_long
5118 LENG 45
5119 ALPH DNA
5120 RF no
5121 CS no
5122 MAP yes
5123 DATE Sat Feb 18 00:55:14 2012
5124 NSEQ 587
5125 EFFN 3.891777
5126 CKSUM 1697391222
5127 STATS LOCAL MSV -7.1697 0.71931
5128 STATS LOCAL VITERBI -7.5248 0.71931
5129 STATS LOCAL FORWARD -3.7808 0.71931
5130 HMM A C G T
5131 m->m m->i m->d i->m i->i d->m d->d
5132 COMPO 1.71133 1.10198 1.09475 1.88033
5133 1.38629 1.38629 1.38629 1.38629
5134 0.03338 4.10952 4.10952 1.46634 0.26236 0.00000 *
5135 1 3.06016 3.75344 0.10053 3.67589 1 - -
5136 1.38629 1.38629 1.38629 1.38629
5137 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5138 2 3.62320 0.10965 3.66422 2.96550 2 - -
5139 1.38629 1.38629 1.38629 1.38629
5140 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5141 3 3.56594 0.12071 3.60913 2.84114 3 - -
5142 1.38629 1.38629 1.38629 1.38629
5143 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5144 4 3.36563 0.16464 3.41655 2.47178 4 - -
5145 1.38629 1.38629 1.38629 1.38629
5146 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5147 5 2.81056 3.64966 0.12157 3.56477 5 - -
5148 1.38629 1.38629 1.38629 1.38629
5149 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5150 6 0.12179 3.54633 2.90895 3.46414 6 - -
5151 1.38629 1.38629 1.38629 1.38629
5152 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5153 7 0.17514 3.06396 2.62741 3.17743 7 - -
5154 1.38629 1.38629 1.38629 1.38629
5155 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5156 8 2.91815 3.69722 0.11173 3.61602 8 - -
5157 1.38629 1.38629 1.38629 1.38629
5158 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5159 9 3.56658 0.12058 3.60974 2.84245 9 - -
5160 1.38629 1.38629 1.38629 1.38629
5161 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5162 10 3.62320 0.10965 3.66422 2.96550 10 - -
5163 1.38629 1.38629 1.38629 1.38629
5164 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5165 11 0.20648 3.24919 2.25688 3.14477 11 - -
5166 1.38629 1.38629 1.38629 1.38629
5167 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5168 12 2.93498 1.96420 2.99032 0.27928 12 - -
5169 1.38629 1.38629 1.38629 1.38629
5170 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5171 13 2.57765 1.24737 2.64559 0.56947 13 - -
5172 1.38629 1.38629 1.38629 1.38629
5173 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5174 14 0.12179 3.54633 2.90895 3.46414 14 - -
5175 1.38629 1.38629 1.38629 1.38629
5176 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5177 15 3.06016 3.75344 0.10053 3.67589 15 - -
5178 1.38629 1.38629 1.38629 1.38629
5179 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5180 16 3.06016 3.75344 0.10053 3.67589 16 - -
5181 1.38629 1.38629 1.38629 1.38629
5182 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5183 17 2.85229 0.35474 2.91819 1.67717 17 - -
5184 1.38629 1.38629 1.38629 1.38629
5185 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5186 18 3.17254 0.21846 3.23000 2.16467 18 - -
5187 1.38629 1.38629 1.38629 1.38629
5188 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5189 19 2.62184 3.38064 0.15152 3.38409 19 - -
5190 1.38629 1.38629 1.38629 1.38629
5191 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5192 20 0.12179 3.54633 2.90895 3.46414 20 - -
5193 1.38629 1.38629 1.38629 1.38629
5194 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5195 21 2.92968 3.70206 0.11075 3.62122 21 - -
5196 1.38629 1.38629 1.38629 1.38629
5197 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5198 22 3.06016 3.75344 0.10053 3.67589 22 - -
5199 1.38629 1.38629 1.38629 1.38629
5200 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5201 23 3.06016 3.75344 0.10053 3.67589 23 - -
5202 1.38629 1.38629 1.38629 1.38629
5203 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5204 24 3.62320 0.10965 3.66422 2.96550 24 - -
5205 1.38629 1.38629 1.38629 1.38629
5206 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5207 25 0.12179 3.54633 2.90895 3.46414 25 - -
5208 1.38629 1.38629 1.38629 1.38629
5209 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5210 26 3.62320 0.10965 3.66422 2.96550 26 - -
5211 1.38629 1.38629 1.38629 1.38629
5212 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5213 27 3.06016 3.75344 0.10053 3.67589 27 - -
5214 1.38629 1.38629 1.38629 1.38629
5215 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5216 28 2.85132 1.80401 2.90988 0.32419 28 - -
5217 1.38629 1.38629 1.38629 1.38629
5218 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5219 29 3.62320 0.10965 3.66422 2.96550 29 - -
5220 1.38629 1.38629 1.38629 1.38629
5221 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5222 30 3.25952 2.70356 3.30102 0.15341 30 - -
5223 1.38629 1.38629 1.38629 1.38629
5224 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5225 31 3.06016 3.75344 0.10053 3.67589 31 - -
5226 1.38629 1.38629 1.38629 1.38629
5227 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5228 32 3.62320 0.10965 3.66422 2.96550 32 - -
5229 1.38629 1.38629 1.38629 1.38629
5230 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5231 33 3.51379 0.13127 3.55903 2.73696 33 - -
5232 1.38629 1.38629 1.38629 1.38629
5233 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5234 34 3.25952 2.70356 3.30102 0.15341 34 - -
5235 1.38629 1.38629 1.38629 1.38629
5236 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5237 35 3.06016 3.75344 0.10053 3.67589 35 - -
5238 1.38629 1.38629 1.38629 1.38629
5239 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5240 36 3.06016 3.75344 0.10053 3.67589 36 - -
5241 1.38629 1.38629 1.38629 1.38629
5242 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5243 37 3.06016 3.75344 0.10053 3.67589 37 - -
5244 1.38629 1.38629 1.38629 1.38629
5245 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5246 38 3.13791 0.22977 3.19643 2.11195 38 - -
5247 1.38629 1.38629 1.38629 1.38629
5248 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5249 39 3.06016 3.75344 0.10053 3.67589 39 - -
5250 1.38629 1.38629 1.38629 1.38629
5251 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5252 40 3.25952 2.70356 3.30102 0.15341 40 - -
5253 1.38629 1.38629 1.38629 1.38629
5254 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5255 41 3.62320 0.10965 3.66422 2.96550 41 - -
5256 1.38629 1.38629 1.38629 1.38629
5257 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5258 42 0.15696 3.41095 2.57610 3.31922 42 - -
5259 1.38629 1.38629 1.38629 1.38629
5260 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5261 43 3.27489 0.13187 3.50961 2.88566 43 - -
5262 1.38629 1.38629 1.38629 1.38629
5263 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5264 44 1.30792 2.73853 0.52656 2.59939 44 - -
5265 1.38629 1.38629 1.38629 1.38629
5266 0.03338 4.10952 4.10952 1.46634 0.26236 1.09861 0.40547
5267 45 3.16945 0.21944 3.22700 2.15995 45 - -
5268 1.38629 1.38629 1.38629 1.38629
5269 0.01683 4.09297 * 1.46634 0.26236 0.00000 *
5270 //
5271 HMMER3/b [3.0 | March 2010]
5272 NAME 3_End_Tracheophyta_58S_end_sevena_long
5273 LENG 45
5274 ALPH DNA
5275 RF no
5276 CS no
5277 MAP yes
5278 DATE Sat Feb 18 00:56:45 2012
5279 NSEQ 310
5280 EFFN 3.855133
5281 CKSUM 3216610733
5282 STATS LOCAL MSV -7.0299 0.71931
5283 STATS LOCAL VITERBI -7.7698 0.71931
5284 STATS LOCAL FORWARD -3.9428 0.71931
5285 HMM A C G T
5286 m->m m->i m->d i->m i->i d->m d->d
5287 COMPO 1.67405 1.19795 1.11767 1.69466
5288 1.38629 1.38629 1.38629 1.38629
5289 0.03359 4.10349 4.10349 1.46634 0.26236 0.00000 *
5290 1 3.05368 3.74384 0.10142 3.66524 1 - -
5291 1.38629 1.38629 1.38629 1.38629
5292 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5293 2 3.61208 0.11075 3.65362 2.95761 2 - -
5294 1.38629 1.38629 1.38629 1.38629
5295 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5296 3 3.61208 0.11075 3.65362 2.95761 3 - -
5297 1.38629 1.38629 1.38629 1.38629
5298 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5299 4 2.59107 1.29979 2.65845 0.54057 4 - -
5300 1.38629 1.38629 1.38629 1.38629
5301 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5302 5 3.05368 3.74384 0.10142 3.66524 5 - -
5303 1.38629 1.38629 1.38629 1.38629
5304 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5305 6 0.12288 3.53654 2.90267 3.45338 6 - -
5306 1.38629 1.38629 1.38629 1.38629
5307 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5308 7 0.12288 3.53654 2.90267 3.45338 7 - -
5309 1.38629 1.38629 1.38629 1.38629
5310 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5311 8 2.98957 3.60522 0.12061 3.32062 8 - -
5312 1.38629 1.38629 1.38629 1.38629
5313 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5314 9 3.61208 0.11075 3.65362 2.95761 9 - -
5315 1.38629 1.38629 1.38629 1.38629
5316 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5317 10 3.61208 0.11075 3.65362 2.95761 10 - -
5318 1.38629 1.38629 1.38629 1.38629
5319 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5320 11 0.16647 3.30347 2.72562 2.97421 11 - -
5321 1.38629 1.38629 1.38629 1.38629
5322 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5323 12 3.18560 2.52848 3.23014 0.17517 12 - -
5324 1.38629 1.38629 1.38629 1.38629
5325 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5326 13 2.50599 0.79710 2.57733 0.93702 13 - -
5327 1.38629 1.38629 1.38629 1.38629
5328 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5329 14 0.27114 2.82965 2.52499 2.31874 14 - -
5330 1.38629 1.38629 1.38629 1.38629
5331 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5332 15 3.05368 3.74384 0.10142 3.66524 15 - -
5333 1.38629 1.38629 1.38629 1.38629
5334 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5335 16 3.05368 3.74384 0.10142 3.66524 16 - -
5336 1.38629 1.38629 1.38629 1.38629
5337 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5338 17 2.46692 1.31463 2.58990 0.55940 17 - -
5339 1.38629 1.38629 1.38629 1.38629
5340 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5341 18 2.95659 2.02338 3.01095 0.26585 18 - -
5342 1.38629 1.38629 1.38629 1.38629
5343 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5344 19 2.53330 3.49926 0.15422 3.40229 19 - -
5345 1.38629 1.38629 1.38629 1.38629
5346 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5347 20 0.12288 3.53654 2.90267 3.45338 20 - -
5348 1.38629 1.38629 1.38629 1.38629
5349 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5350 21 0.50829 2.72162 1.35743 2.58515 21 - -
5351 1.38629 1.38629 1.38629 1.38629
5352 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5353 22 3.05368 3.74384 0.10142 3.66524 22 - -
5354 1.38629 1.38629 1.38629 1.38629
5355 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5356 23 3.05368 3.74384 0.10142 3.66524 23 - -
5357 1.38629 1.38629 1.38629 1.38629
5358 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5359 24 3.61208 0.11075 3.65362 2.95761 24 - -
5360 1.38629 1.38629 1.38629 1.38629
5361 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5362 25 0.12288 3.53654 2.90267 3.45338 25 - -
5363 1.38629 1.38629 1.38629 1.38629
5364 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5365 26 3.61208 0.11075 3.65362 2.95761 26 - -
5366 1.38629 1.38629 1.38629 1.38629
5367 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5368 27 3.05368 3.74384 0.10142 3.66524 27 - -
5369 1.38629 1.38629 1.38629 1.38629
5370 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5371 28 3.15074 2.44306 3.19681 0.18706 28 - -
5372 1.38629 1.38629 1.38629 1.38629
5373 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5374 29 3.61208 0.11075 3.65362 2.95761 29 - -
5375 1.38629 1.38629 1.38629 1.38629
5376 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5377 30 3.24926 2.69705 3.29116 0.15480 30 - -
5378 1.38629 1.38629 1.38629 1.38629
5379 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5380 31 3.05368 3.74384 0.10142 3.66524 31 - -
5381 1.38629 1.38629 1.38629 1.38629
5382 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5383 32 3.61208 0.11075 3.65362 2.95761 32 - -
5384 1.38629 1.38629 1.38629 1.38629
5385 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5386 33 3.41158 0.15244 3.46077 2.56405 33 - -
5387 1.38629 1.38629 1.38629 1.38629
5388 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5389 34 3.24926 2.69705 3.29116 0.15480 34 - -
5390 1.38629 1.38629 1.38629 1.38629
5391 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5392 35 3.05368 3.74384 0.10142 3.66524 35 - -
5393 1.38629 1.38629 1.38629 1.38629
5394 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5395 36 3.05368 3.74384 0.10142 3.66524 36 - -
5396 1.38629 1.38629 1.38629 1.38629
5397 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5398 37 3.05368 3.74384 0.10142 3.66524 37 - -
5399 1.38629 1.38629 1.38629 1.38629
5400 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5401 38 3.53725 0.12537 3.58159 2.79845 38 - -
5402 1.38629 1.38629 1.38629 1.38629
5403 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5404 39 3.05368 3.74384 0.10142 3.66524 39 - -
5405 1.38629 1.38629 1.38629 1.38629
5406 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5407 40 3.24926 2.69705 3.29116 0.15480 40 - -
5408 1.38629 1.38629 1.38629 1.38629
5409 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5410 41 3.61208 0.11075 3.65362 2.95761 41 - -
5411 1.38629 1.38629 1.38629 1.38629
5412 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5413 42 0.12288 3.53654 2.90267 3.45338 42 - -
5414 1.38629 1.38629 1.38629 1.38629
5415 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5416 43 3.61208 0.11075 3.65362 2.95761 43 - -
5417 1.38629 1.38629 1.38629 1.38629
5418 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5419 44 2.89872 3.68146 0.11388 3.59882 44 - -
5420 1.38629 1.38629 1.38629 1.38629
5421 0.03359 4.10349 4.10349 1.46634 0.26236 1.09861 0.40547
5422 45 3.55506 0.12180 3.59872 2.83466 45 - -
5423 1.38629 1.38629 1.38629 1.38629
5424 0.01693 4.08684 * 1.46634 0.26236 0.00000 *
5425 //
5426 HMMER3/b [3.0 | March 2010]
5427 NAME 3_End_Tracheophyta_58S_end_sevenb_long
5428 LENG 45
5429 ALPH DNA
5430 RF no
5431 CS no
5432 MAP yes
5433 DATE Sat Feb 18 00:56:54 2012
5434 NSEQ 184
5435 EFFN 4.096313
5436 CKSUM 2897657156
5437 STATS LOCAL MSV -7.4526 0.71932
5438 STATS LOCAL VITERBI -7.5187 0.71932
5439 STATS LOCAL FORWARD -3.9319 0.71932
5440 HMM A C G T
5441 m->m m->i m->d i->m i->i d->m d->d
5442 COMPO 1.73723 1.11401 1.12992 1.75624
5443 1.38629 1.38629 1.38629 1.38629
5444 0.03228 4.14255 4.14255 1.46634 0.26236 0.00000 *
5445 1 3.09467 3.80465 0.09594 3.73279 1 - -
5446 1.38629 1.38629 1.38629 1.38629
5447 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5448 2 3.55672 0.12851 3.60023 2.73722 2 - -
5449 1.38629 1.38629 1.38629 1.38629
5450 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5451 3 3.53201 0.13366 3.57655 2.68978 3 - -
5452 1.38629 1.38629 1.38629 1.38629
5453 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5454 4 3.33147 0.18101 3.38384 2.34426 4 - -
5455 1.38629 1.38629 1.38629 1.38629
5456 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5457 5 2.02324 2.72720 0.29637 2.83260 5 - -
5458 1.38629 1.38629 1.38629 1.38629
5459 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5460 6 0.11611 3.59888 2.94269 3.52192 6 - -
5461 1.38629 1.38629 1.38629 1.38629
5462 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5463 7 0.21327 2.87621 2.62174 2.76401 7 - -
5464 1.38629 1.38629 1.38629 1.38629
5465 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5466 8 3.09467 3.80465 0.09594 3.73279 8 - -
5467 1.38629 1.38629 1.38629 1.38629
5468 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5469 9 3.62514 0.11488 3.66575 2.87711 9 - -
5470 1.38629 1.38629 1.38629 1.38629
5471 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5472 10 3.68265 0.10401 3.72091 3.00757 10 - -
5473 1.38629 1.38629 1.38629 1.38629
5474 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5475 11 0.11611 3.59888 2.94269 3.52192 11 - -
5476 1.38629 1.38629 1.38629 1.38629
5477 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5478 12 3.06832 2.13915 3.11882 0.23378 12 - -
5479 1.38629 1.38629 1.38629 1.38629
5480 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5481 13 3.04696 2.09498 3.09839 0.24296 13 - -
5482 1.38629 1.38629 1.38629 1.38629
5483 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5484 14 0.13047 3.54101 2.78212 3.46007 14 - -
5485 1.38629 1.38629 1.38629 1.38629
5486 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5487 15 3.09467 3.80465 0.09594 3.73279 15 - -
5488 1.38629 1.38629 1.38629 1.38629
5489 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5490 16 3.09467 3.80465 0.09594 3.73279 16 - -
5491 1.38629 1.38629 1.38629 1.38629
5492 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5493 17 3.31413 0.18568 3.36711 2.31667 17 - -
5494 1.38629 1.38629 1.38629 1.38629
5495 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5496 18 2.65424 0.47357 2.66048 1.43988 18 - -
5497 1.38629 1.38629 1.38629 1.38629
5498 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5499 19 2.77225 3.46439 0.13224 3.50459 19 - -
5500 1.38629 1.38629 1.38629 1.38629
5501 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5502 20 0.11611 3.59888 2.94269 3.52192 20 - -
5503 1.38629 1.38629 1.38629 1.38629
5504 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5505 21 2.73642 3.65689 0.12634 3.57310 21 - -
5506 1.38629 1.38629 1.38629 1.38629
5507 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5508 22 3.09467 3.80465 0.09594 3.73279 22 - -
5509 1.38629 1.38629 1.38629 1.38629
5510 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5511 23 3.09467 3.80465 0.09594 3.73279 23 - -
5512 1.38629 1.38629 1.38629 1.38629
5513 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5514 24 3.33501 0.12429 3.57448 2.93312 24 - -
5515 1.38629 1.38629 1.38629 1.38629
5516 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5517 25 0.11611 3.59888 2.94269 3.52192 25 - -
5518 1.38629 1.38629 1.38629 1.38629
5519 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5520 26 3.61888 0.11609 3.65976 2.86371 26 - -
5521 1.38629 1.38629 1.38629 1.38629
5522 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5523 27 3.09467 3.80465 0.09594 3.73279 27 - -
5524 1.38629 1.38629 1.38629 1.38629
5525 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5526 28 3.06936 2.14133 3.11982 0.23334 28 - -
5527 1.38629 1.38629 1.38629 1.38629
5528 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5529 29 3.68265 0.10401 3.72091 3.00757 29 - -
5530 1.38629 1.38629 1.38629 1.38629
5531 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5532 30 3.31505 2.73883 3.35436 0.14608 30 - -
5533 1.38629 1.38629 1.38629 1.38629
5534 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5535 31 3.09467 3.80465 0.09594 3.73279 31 - -
5536 1.38629 1.38629 1.38629 1.38629
5537 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5538 32 3.51746 0.13675 3.56261 2.66251 32 - -
5539 1.38629 1.38629 1.38629 1.38629
5540 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5541 33 3.55003 0.12990 3.59382 2.72424 33 - -
5542 1.38629 1.38629 1.38629 1.38629
5543 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5544 34 3.31505 2.73883 3.35436 0.14608 34 - -
5545 1.38629 1.38629 1.38629 1.38629
5546 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5547 35 3.09467 3.80465 0.09594 3.73279 35 - -
5548 1.38629 1.38629 1.38629 1.38629
5549 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5550 36 3.09467 3.80465 0.09594 3.73279 36 - -
5551 1.38629 1.38629 1.38629 1.38629
5552 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5553 37 3.09467 3.80465 0.09594 3.73279 37 - -
5554 1.38629 1.38629 1.38629 1.38629
5555 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5556 38 3.38555 0.15427 3.27515 2.64099 38 - -
5557 1.38629 1.38629 1.38629 1.38629
5558 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5559 39 2.94006 3.74674 0.10749 3.67066 39 - -
5560 1.38629 1.38629 1.38629 1.38629
5561 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5562 40 3.31505 2.73883 3.35436 0.14608 40 - -
5563 1.38629 1.38629 1.38629 1.38629
5564 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5565 41 2.84891 0.20155 2.98732 2.60085 41 - -
5566 1.38629 1.38629 1.38629 1.38629
5567 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5568 42 1.72403 2.16146 2.48249 0.47327 42 - -
5569 1.38629 1.38629 1.38629 1.38629
5570 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5571 43 3.56741 0.12633 3.61046 2.75818 43 - -
5572 1.38629 1.38629 1.38629 1.38629
5573 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5574 44 0.41750 2.70260 1.70268 2.38509 44 - -
5575 1.38629 1.38629 1.38629 1.38629
5576 0.03228 4.14255 4.14255 1.46634 0.26236 1.09861 0.40547
5577 45 3.52354 0.13546 3.56843 2.67384 45 - -
5578 1.38629 1.38629 1.38629 1.38629
5579 0.01627 4.12654 * 1.46634 0.26236 0.00000 *
5580 //
5581 HMMER3/b [3.0 | March 2010]
5582 NAME 3_End_Tracheophyta_58S_end_seventeen_long
5583 LENG 45
5584 ALPH DNA
5585 RF no
5586 CS no
5587 MAP yes
5588 DATE Sat Feb 18 01:01:38 2012
5589 NSEQ 21
5590 EFFN 3.242798
5591 CKSUM 1804940685
5592 STATS LOCAL MSV -8.0506 0.71931
5593 STATS LOCAL VITERBI -7.8621 0.71931
5594 STATS LOCAL FORWARD -3.9865 0.71931
5595 HMM A C G T
5596 m->m m->i m->d i->m i->i d->m d->d
5597 COMPO 1.54969 1.31844 1.19398 1.52729
5598 1.38629 1.38629 1.38629 1.38629
5599 0.03744 3.99688 3.99688 1.46634 0.26236 0.00000 *
5600 1 2.92936 3.56139 0.12009 3.46334 1 - -
5601 1.38629 1.38629 1.38629 1.38629
5602 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5603 2 3.40322 0.13383 3.45393 2.80719 2 - -
5604 1.38629 1.38629 1.38629 1.38629
5605 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5606 3 3.40322 0.13383 3.45393 2.80719 3 - -
5607 1.38629 1.38629 1.38629 1.38629
5608 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5609 4 3.06252 2.57853 3.11167 0.18294 4 - -
5610 1.38629 1.38629 1.38629 1.38629
5611 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5612 5 2.92936 3.56139 0.12009 3.46334 5 - -
5613 1.38629 1.38629 1.38629 1.38629
5614 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5615 6 0.14537 3.35434 2.78506 3.25357 6 - -
5616 1.38629 1.38629 1.38629 1.38629
5617 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5618 7 0.14537 3.35434 2.78506 3.25357 7 - -
5619 1.38629 1.38629 1.38629 1.38629
5620 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5621 8 0.14537 3.35434 2.78506 3.25357 8 - -
5622 1.38629 1.38629 1.38629 1.38629
5623 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5624 9 3.40322 0.13383 3.45393 2.80719 9 - -
5625 1.38629 1.38629 1.38629 1.38629
5626 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5627 10 3.40322 0.13383 3.45393 2.80719 10 - -
5628 1.38629 1.38629 1.38629 1.38629
5629 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5630 11 0.14537 3.35434 2.78506 3.25357 11 - -
5631 1.38629 1.38629 1.38629 1.38629
5632 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5633 12 3.06252 2.57853 3.11167 0.18294 12 - -
5634 1.38629 1.38629 1.38629 1.38629
5635 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5636 13 3.06252 2.57853 3.11167 0.18294 13 - -
5637 1.38629 1.38629 1.38629 1.38629
5638 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5639 14 0.14537 3.35434 2.78506 3.25357 14 - -
5640 1.38629 1.38629 1.38629 1.38629
5641 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5642 15 2.92936 3.56139 0.12009 3.46334 15 - -
5643 1.38629 1.38629 1.38629 1.38629
5644 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5645 16 2.92936 3.56139 0.12009 3.46334 16 - -
5646 1.38629 1.38629 1.38629 1.38629
5647 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5648 17 3.06252 2.57853 3.11167 0.18294 17 - -
5649 1.38629 1.38629 1.38629 1.38629
5650 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5651 18 3.06252 2.57853 3.11167 0.18294 18 - -
5652 1.38629 1.38629 1.38629 1.38629
5653 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5654 19 2.92936 3.56139 0.12009 3.46334 19 - -
5655 1.38629 1.38629 1.38629 1.38629
5656 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5657 20 0.14537 3.35434 2.78506 3.25357 20 - -
5658 1.38629 1.38629 1.38629 1.38629
5659 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5660 21 2.92936 3.56139 0.12009 3.46334 21 - -
5661 1.38629 1.38629 1.38629 1.38629
5662 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5663 22 2.92936 3.56139 0.12009 3.46334 22 - -
5664 1.38629 1.38629 1.38629 1.38629
5665 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5666 23 2.92936 3.56139 0.12009 3.46334 23 - -
5667 1.38629 1.38629 1.38629 1.38629
5668 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5669 24 3.40322 0.13383 3.45393 2.80719 24 - -
5670 1.38629 1.38629 1.38629 1.38629
5671 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5672 25 0.14537 3.35434 2.78506 3.25357 25 - -
5673 1.38629 1.38629 1.38629 1.38629
5674 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5675 26 3.40322 0.13383 3.45393 2.80719 26 - -
5676 1.38629 1.38629 1.38629 1.38629
5677 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5678 27 2.92936 3.56139 0.12009 3.46334 27 - -
5679 1.38629 1.38629 1.38629 1.38629
5680 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5681 28 2.59442 1.59732 2.65985 0.42631 28 - -
5682 1.38629 1.38629 1.38629 1.38629
5683 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5684 29 3.40322 0.13383 3.45393 2.80719 29 - -
5685 1.38629 1.38629 1.38629 1.38629
5686 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5687 30 3.06252 2.57853 3.11167 0.18294 30 - -
5688 1.38629 1.38629 1.38629 1.38629
5689 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5690 31 2.92936 3.56139 0.12009 3.46334 31 - -
5691 1.38629 1.38629 1.38629 1.38629
5692 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5693 32 3.40322 0.13383 3.45393 2.80719 32 - -
5694 1.38629 1.38629 1.38629 1.38629
5695 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5696 33 3.40322 0.13383 3.45393 2.80719 33 - -
5697 1.38629 1.38629 1.38629 1.38629
5698 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5699 34 3.06252 2.57853 3.11167 0.18294 34 - -
5700 1.38629 1.38629 1.38629 1.38629
5701 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5702 35 2.92936 3.56139 0.12009 3.46334 35 - -
5703 1.38629 1.38629 1.38629 1.38629
5704 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5705 36 2.92936 3.56139 0.12009 3.46334 36 - -
5706 1.38629 1.38629 1.38629 1.38629
5707 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5708 37 2.92936 3.56139 0.12009 3.46334 37 - -
5709 1.38629 1.38629 1.38629 1.38629
5710 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5711 38 3.06252 2.57853 3.11167 0.18294 38 - -
5712 1.38629 1.38629 1.38629 1.38629
5713 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5714 39 2.92936 3.56139 0.12009 3.46334 39 - -
5715 1.38629 1.38629 1.38629 1.38629
5716 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5717 40 3.06252 2.57853 3.11167 0.18294 40 - -
5718 1.38629 1.38629 1.38629 1.38629
5719 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5720 41 3.40322 0.13383 3.45393 2.80719 41 - -
5721 1.38629 1.38629 1.38629 1.38629
5722 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5723 42 0.14537 3.35434 2.78506 3.25357 42 - -
5724 1.38629 1.38629 1.38629 1.38629
5725 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5726 43 3.40322 0.13383 3.45393 2.80719 43 - -
5727 1.38629 1.38629 1.38629 1.38629
5728 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5729 44 0.14537 3.35434 2.78506 3.25357 44 - -
5730 1.38629 1.38629 1.38629 1.38629
5731 0.03744 3.99688 3.99688 1.46634 0.26236 1.09861 0.40547
5732 45 3.40322 0.13383 3.45393 2.80719 45 - -
5733 1.38629 1.38629 1.38629 1.38629
5734 0.01889 3.97833 * 1.46634 0.26236 0.00000 *
5735 //
5736 HMMER3/b [3.0 | March 2010]
5737 NAME 3_End_Tracheophyta_58S_end_six_long
5738 LENG 45
5739 ALPH DNA
5740 RF no
5741 CS no
5742 MAP yes
5743 DATE Sat Feb 18 00:56:35 2012
5744 NSEQ 53
5745 EFFN 3.768616
5746 CKSUM 2228915480
5747 STATS LOCAL MSV -7.1018 0.71931
5748 STATS LOCAL VITERBI -7.4669 0.71931
5749 STATS LOCAL FORWARD -3.6610 0.71931
5750 HMM A C G T
5751 m->m m->i m->d i->m i->i d->m d->d
5752 COMPO 1.73514 1.11339 1.10213 1.81389
5753 1.38629 1.38629 1.38629 1.38629
5754 0.03408 4.08910 4.08910 1.46634 0.26236 0.00000 *
5755 1 3.03800 3.72062 0.10360 3.63948 1 - -
5756 1.38629 1.38629 1.38629 1.38629
5757 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5758 2 3.58526 0.11344 3.62802 2.93853 2 - -
5759 1.38629 1.38629 1.38629 1.38629
5760 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5761 3 3.58526 0.11344 3.62802 2.93853 3 - -
5762 1.38629 1.38629 1.38629 1.38629
5763 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5764 4 3.22322 0.19760 3.27897 2.28465 4 - -
5765 1.38629 1.38629 1.38629 1.38629
5766 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5767 5 2.45755 3.43624 0.16660 3.33445 5 - -
5768 1.38629 1.38629 1.38629 1.38629
5769 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5770 6 0.12555 3.51297 2.88754 3.42748 6 - -
5771 1.38629 1.38629 1.38629 1.38629
5772 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5773 7 0.12555 3.51297 2.88754 3.42748 7 - -
5774 1.38629 1.38629 1.38629 1.38629
5775 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5776 8 3.03800 3.72062 0.10360 3.63948 8 - -
5777 1.38629 1.38629 1.38629 1.38629
5778 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5779 9 3.58526 0.11344 3.62802 2.93853 9 - -
5780 1.38629 1.38629 1.38629 1.38629
5781 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5782 10 3.58526 0.11344 3.62802 2.93853 10 - -
5783 1.38629 1.38629 1.38629 1.38629
5784 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5785 11 0.61343 2.31223 2.08242 1.44883 11 - -
5786 1.38629 1.38629 1.38629 1.38629
5787 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5788 12 3.05803 2.27604 3.10788 0.21612 12 - -
5789 1.38629 1.38629 1.38629 1.38629
5790 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5791 13 2.92548 2.00153 2.98079 0.27381 13 - -
5792 1.38629 1.38629 1.38629 1.38629
5793 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5794 14 0.12555 3.51297 2.88754 3.42748 14 - -
5795 1.38629 1.38629 1.38629 1.38629
5796 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5797 15 3.03800 3.72062 0.10360 3.63948 15 - -
5798 1.38629 1.38629 1.38629 1.38629
5799 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5800 16 2.94024 3.23793 0.13365 3.41110 16 - -
5801 1.38629 1.38629 1.38629 1.38629
5802 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5803 17 3.58526 0.11344 3.62802 2.93853 17 - -
5804 1.38629 1.38629 1.38629 1.38629
5805 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5806 18 3.23244 0.16906 2.94715 2.75527 18 - -
5807 1.38629 1.38629 1.38629 1.38629
5808 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5809 19 2.11016 2.43820 0.51231 1.64843 19 - -
5810 1.38629 1.38629 1.38629 1.38629
5811 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5812 20 0.12555 3.51297 2.88754 3.42748 20 - -
5813 1.38629 1.38629 1.38629 1.38629
5814 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5815 21 3.03800 3.72062 0.10360 3.63948 21 - -
5816 1.38629 1.38629 1.38629 1.38629
5817 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5818 22 3.03800 3.72062 0.10360 3.63948 22 - -
5819 1.38629 1.38629 1.38629 1.38629
5820 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5821 23 3.03800 3.72062 0.10360 3.63948 23 - -
5822 1.38629 1.38629 1.38629 1.38629
5823 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5824 24 3.58526 0.11344 3.62802 2.93853 24 - -
5825 1.38629 1.38629 1.38629 1.38629
5826 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5827 25 0.12555 3.51297 2.88754 3.42748 25 - -
5828 1.38629 1.38629 1.38629 1.38629
5829 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5830 26 3.58526 0.11344 3.62802 2.93853 26 - -
5831 1.38629 1.38629 1.38629 1.38629
5832 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5833 27 3.03800 3.72062 0.10360 3.63948 27 - -
5834 1.38629 1.38629 1.38629 1.38629
5835 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5836 28 3.22464 2.68145 3.26752 0.15822 28 - -
5837 1.38629 1.38629 1.38629 1.38629
5838 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5839 29 3.58526 0.11344 3.62802 2.93853 29 - -
5840 1.38629 1.38629 1.38629 1.38629
5841 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5842 30 3.22464 2.68145 3.26752 0.15822 30 - -
5843 1.38629 1.38629 1.38629 1.38629
5844 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5845 31 3.03800 3.72062 0.10360 3.63948 31 - -
5846 1.38629 1.38629 1.38629 1.38629
5847 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5848 32 3.58526 0.11344 3.62802 2.93853 32 - -
5849 1.38629 1.38629 1.38629 1.38629
5850 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5851 33 1.52707 0.55184 2.39442 2.15661 33 - -
5852 1.38629 1.38629 1.38629 1.38629
5853 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5854 34 3.22464 2.68145 3.26752 0.15822 34 - -
5855 1.38629 1.38629 1.38629 1.38629
5856 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5857 35 3.03800 3.72062 0.10360 3.63948 35 - -
5858 1.38629 1.38629 1.38629 1.38629
5859 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5860 36 3.03800 3.72062 0.10360 3.63948 36 - -
5861 1.38629 1.38629 1.38629 1.38629
5862 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5863 37 3.03800 3.72062 0.10360 3.63948 37 - -
5864 1.38629 1.38629 1.38629 1.38629
5865 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5866 38 3.58526 0.11344 3.62802 2.93853 38 - -
5867 1.38629 1.38629 1.38629 1.38629
5868 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5869 39 3.03800 3.72062 0.10360 3.63948 39 - -
5870 1.38629 1.38629 1.38629 1.38629
5871 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5872 40 3.22464 2.68145 3.26752 0.15822 40 - -
5873 1.38629 1.38629 1.38629 1.38629
5874 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5875 41 3.58526 0.11344 3.62802 2.93853 41 - -
5876 1.38629 1.38629 1.38629 1.38629
5877 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5878 42 0.12555 3.51297 2.88754 3.42748 42 - -
5879 1.38629 1.38629 1.38629 1.38629
5880 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5881 43 3.58526 0.11344 3.62802 2.93853 43 - -
5882 1.38629 1.38629 1.38629 1.38629
5883 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5884 44 2.33055 3.35882 0.18721 3.25152 44 - -
5885 1.38629 1.38629 1.38629 1.38629
5886 0.03408 4.08910 4.08910 1.46634 0.26236 1.09861 0.40547
5887 45 3.15566 0.21804 3.21353 2.17963 45 - -
5888 1.38629 1.38629 1.38629 1.38629
5889 0.01719 4.07220 * 1.46634 0.26236 0.00000 *
5890 //
5891 HMMER3/b [3.0 | March 2010]
5892 NAME 3_End_Tracheophyta_58S_end_sixteena_long
5893 LENG 45
5894 ALPH DNA
5895 RF no
5896 CS no
5897 MAP yes
5898 DATE Sat Feb 18 01:00:03 2012
5899 NSEQ 2
5900 EFFN 2.000000
5901 CKSUM 4271773268
5902 STATS LOCAL MSV -7.4881 0.72737
5903 STATS LOCAL VITERBI -8.2452 0.72737
5904 STATS LOCAL FORWARD -3.2511 0.72737
5905 HMM A C G T
5906 m->m m->i m->d i->m i->i d->m d->d
5907 COMPO 1.74640 1.19459 1.17033 1.54879
5908 1.38629 1.38629 1.38629 1.38629
5909 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5910 1 2.53331 3.02441 0.20344 2.88069 1 - -
5911 1.38629 1.38629 1.38629 1.38629
5912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5913 2 2.81865 0.23582 2.88868 2.35662 2 - -
5914 1.38629 1.38629 1.38629 1.38629
5915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5916 3 2.81865 0.23582 2.88868 2.35662 3 - -
5917 1.38629 1.38629 1.38629 1.38629
5918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5919 4 2.81865 0.23582 2.88868 2.35662 4 - -
5920 1.38629 1.38629 1.38629 1.38629
5921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5922 5 2.53331 3.02441 0.20344 2.88069 5 - -
5923 1.38629 1.38629 1.38629 1.38629
5924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5925 6 0.23862 2.84929 2.43386 2.70756 6 - -
5926 1.38629 1.38629 1.38629 1.38629
5927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5928 7 0.23862 2.84929 2.43386 2.70756 7 - -
5929 1.38629 1.38629 1.38629 1.38629
5930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5931 8 2.53331 3.02441 0.20344 2.88069 8 - -
5932 1.38629 1.38629 1.38629 1.38629
5933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5934 9 2.81865 0.23582 2.88868 2.35662 9 - -
5935 1.38629 1.38629 1.38629 1.38629
5936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5937 10 2.81865 0.23582 2.88868 2.35662 10 - -
5938 1.38629 1.38629 1.38629 1.38629
5939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5940 11 2.57915 2.25909 2.64442 0.28946 11 - -
5941 1.38629 1.38629 1.38629 1.38629
5942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5943 12 2.57915 2.25909 2.64442 0.28946 12 - -
5944 1.38629 1.38629 1.38629 1.38629
5945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5946 13 2.81865 0.23582 2.88868 2.35662 13 - -
5947 1.38629 1.38629 1.38629 1.38629
5948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5949 14 2.57915 2.25909 2.64442 0.28946 14 - -
5950 1.38629 1.38629 1.38629 1.38629
5951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5952 15 2.53331 3.02441 0.20344 2.88069 15 - -
5953 1.38629 1.38629 1.38629 1.38629
5954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5955 16 2.53331 3.02441 0.20344 2.88069 16 - -
5956 1.38629 1.38629 1.38629 1.38629
5957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5958 17 2.81865 0.23582 2.88868 2.35662 17 - -
5959 1.38629 1.38629 1.38629 1.38629
5960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5961 18 2.57915 2.25909 2.64442 0.28946 18 - -
5962 1.38629 1.38629 1.38629 1.38629
5963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5964 19 0.23862 2.84929 2.43386 2.70756 19 - -
5965 1.38629 1.38629 1.38629 1.38629
5966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5967 20 0.23862 2.84929 2.43386 2.70756 20 - -
5968 1.38629 1.38629 1.38629 1.38629
5969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5970 21 2.53331 3.02441 0.20344 2.88069 21 - -
5971 1.38629 1.38629 1.38629 1.38629
5972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5973 22 2.53331 3.02441 0.20344 2.88069 22 - -
5974 1.38629 1.38629 1.38629 1.38629
5975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5976 23 2.53331 3.02441 0.20344 2.88069 23 - -
5977 1.38629 1.38629 1.38629 1.38629
5978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5979 24 2.81865 0.23582 2.88868 2.35662 24 - -
5980 1.38629 1.38629 1.38629 1.38629
5981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5982 25 0.23862 2.84929 2.43386 2.70756 25 - -
5983 1.38629 1.38629 1.38629 1.38629
5984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5985 26 2.81865 0.23582 2.88868 2.35662 26 - -
5986 1.38629 1.38629 1.38629 1.38629
5987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5988 27 2.53331 3.02441 0.20344 2.88069 27 - -
5989 1.38629 1.38629 1.38629 1.38629
5990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5991 28 2.81865 0.23582 2.88868 2.35662 28 - -
5992 1.38629 1.38629 1.38629 1.38629
5993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5994 29 2.81865 0.23582 2.88868 2.35662 29 - -
5995 1.38629 1.38629 1.38629 1.38629
5996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5997 30 2.57915 2.25909 2.64442 0.28946 30 - -
5998 1.38629 1.38629 1.38629 1.38629
5999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6000 31 2.53331 3.02441 0.20344 2.88069 31 - -
6001 1.38629 1.38629 1.38629 1.38629
6002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6003 32 2.81865 0.23582 2.88868 2.35662 32 - -
6004 1.38629 1.38629 1.38629 1.38629
6005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6006 33 2.81865 0.23582 2.88868 2.35662 33 - -
6007 1.38629 1.38629 1.38629 1.38629
6008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6009 34 2.57915 2.25909 2.64442 0.28946 34 - -
6010 1.38629 1.38629 1.38629 1.38629
6011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6012 35 2.53331 3.02441 0.20344 2.88069 35 - -
6013 1.38629 1.38629 1.38629 1.38629
6014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6015 36 2.53331 3.02441 0.20344 2.88069 36 - -
6016 1.38629 1.38629 1.38629 1.38629
6017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6018 37 2.53331 3.02441 0.20344 2.88069 37 - -
6019 1.38629 1.38629 1.38629 1.38629
6020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6021 38 2.57915 2.25909 2.64442 0.28946 38 - -
6022 1.38629 1.38629 1.38629 1.38629
6023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6024 39 2.53331 3.02441 0.20344 2.88069 39 - -
6025 1.38629 1.38629 1.38629 1.38629
6026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6027 40 2.57915 2.25909 2.64442 0.28946 40 - -
6028 1.38629 1.38629 1.38629 1.38629
6029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6030 41 2.81865 0.23582 2.88868 2.35662 41 - -
6031 1.38629 1.38629 1.38629 1.38629
6032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6033 42 0.23862 2.84929 2.43386 2.70756 42 - -
6034 1.38629 1.38629 1.38629 1.38629
6035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6036 43 2.57915 2.25909 2.64442 0.28946 43 - -
6037 1.38629 1.38629 1.38629 1.38629
6038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6039 44 2.53331 3.02441 0.20344 2.88069 44 - -
6040 1.38629 1.38629 1.38629 1.38629
6041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6042 45 2.81865 0.23582 2.88868 2.35662 45 - -
6043 1.38629 1.38629 1.38629 1.38629
6044 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6045 //
6046 HMMER3/b [3.0 | March 2010]
6047 NAME 3_End_Tracheophyta_58S_end_sixteenb_long
6048 LENG 45
6049 ALPH DNA
6050 RF no
6051 CS no
6052 MAP yes
6053 DATE Sat Feb 18 01:00:16 2012
6054 NSEQ 2
6055 EFFN 2.000000
6056 CKSUM 3116648824
6057 STATS LOCAL MSV -7.5374 0.72780
6058 STATS LOCAL VITERBI -8.1699 0.72780
6059 STATS LOCAL FORWARD -3.2302 0.72780
6060 HMM A C G T
6061 m->m m->i m->d i->m i->i d->m d->d
6062 COMPO 1.63616 1.14978 1.19874 1.67669
6063 1.38629 1.38629 1.38629 1.38629
6064 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6065 1 2.53331 3.02441 0.20344 2.88069 1 - -
6066 1.38629 1.38629 1.38629 1.38629
6067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6068 2 2.81865 0.23582 2.88868 2.35662 2 - -
6069 1.38629 1.38629 1.38629 1.38629
6070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6071 3 2.81865 0.23582 2.88868 2.35662 3 - -
6072 1.38629 1.38629 1.38629 1.38629
6073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6074 4 2.81865 0.23582 2.88868 2.35662 4 - -
6075 1.38629 1.38629 1.38629 1.38629
6076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6077 5 0.92825 2.28391 0.95698 2.13014 5 - -
6078 1.38629 1.38629 1.38629 1.38629
6079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6080 6 0.23862 2.84929 2.43386 2.70756 6 - -
6081 1.38629 1.38629 1.38629 1.38629
6082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6083 7 0.23862 2.84929 2.43386 2.70756 7 - -
6084 1.38629 1.38629 1.38629 1.38629
6085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6086 8 2.53331 3.02441 0.20344 2.88069 8 - -
6087 1.38629 1.38629 1.38629 1.38629
6088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6089 9 2.81865 0.23582 2.88868 2.35662 9 - -
6090 1.38629 1.38629 1.38629 1.38629
6091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6092 10 2.81865 0.23582 2.88868 2.35662 10 - -
6093 1.38629 1.38629 1.38629 1.38629
6094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6095 11 2.53331 3.02441 0.20344 2.88069 11 - -
6096 1.38629 1.38629 1.38629 1.38629
6097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6098 12 2.57915 2.25909 2.64442 0.28946 12 - -
6099 1.38629 1.38629 1.38629 1.38629
6100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6101 13 2.57915 2.25909 2.64442 0.28946 13 - -
6102 1.38629 1.38629 1.38629 1.38629
6103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6104 14 0.23862 2.84929 2.43386 2.70756 14 - -
6105 1.38629 1.38629 1.38629 1.38629
6106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6107 15 2.53331 3.02441 0.20344 2.88069 15 - -
6108 1.38629 1.38629 1.38629 1.38629
6109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6110 16 2.53331 3.02441 0.20344 2.88069 16 - -
6111 1.38629 1.38629 1.38629 1.38629
6112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6113 17 2.81865 0.23582 2.88868 2.35662 17 - -
6114 1.38629 1.38629 1.38629 1.38629
6115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6116 18 2.81865 0.23582 2.88868 2.35662 18 - -
6117 1.38629 1.38629 1.38629 1.38629
6118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6119 19 2.53331 3.02441 0.20344 2.88069 19 - -
6120 1.38629 1.38629 1.38629 1.38629
6121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6122 20 0.23862 2.84929 2.43386 2.70756 20 - -
6123 1.38629 1.38629 1.38629 1.38629
6124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6125 21 2.53331 3.02441 0.20344 2.88069 21 - -
6126 1.38629 1.38629 1.38629 1.38629
6127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6128 22 2.53331 3.02441 0.20344 2.88069 22 - -
6129 1.38629 1.38629 1.38629 1.38629
6130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6131 23 2.53331 3.02441 0.20344 2.88069 23 - -
6132 1.38629 1.38629 1.38629 1.38629
6133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6134 24 2.81865 0.23582 2.88868 2.35662 24 - -
6135 1.38629 1.38629 1.38629 1.38629
6136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6137 25 0.23862 2.84929 2.43386 2.70756 25 - -
6138 1.38629 1.38629 1.38629 1.38629
6139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6140 26 2.81865 0.23582 2.88868 2.35662 26 - -
6141 1.38629 1.38629 1.38629 1.38629
6142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6143 27 2.53331 3.02441 0.20344 2.88069 27 - -
6144 1.38629 1.38629 1.38629 1.38629
6145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6146 28 2.57915 2.25909 2.64442 0.28946 28 - -
6147 1.38629 1.38629 1.38629 1.38629
6148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6149 29 2.81865 0.23582 2.88868 2.35662 29 - -
6150 1.38629 1.38629 1.38629 1.38629
6151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6152 30 2.57915 2.25909 2.64442 0.28946 30 - -
6153 1.38629 1.38629 1.38629 1.38629
6154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6155 31 2.53331 3.02441 0.20344 2.88069 31 - -
6156 1.38629 1.38629 1.38629 1.38629
6157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6158 32 2.81865 0.23582 2.88868 2.35662 32 - -
6159 1.38629 1.38629 1.38629 1.38629
6160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6161 33 2.81865 0.23582 2.88868 2.35662 33 - -
6162 1.38629 1.38629 1.38629 1.38629
6163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6164 34 2.57915 2.25909 2.64442 0.28946 34 - -
6165 1.38629 1.38629 1.38629 1.38629
6166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6167 35 2.53331 3.02441 0.20344 2.88069 35 - -
6168 1.38629 1.38629 1.38629 1.38629
6169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6170 36 2.53331 3.02441 0.20344 2.88069 36 - -
6171 1.38629 1.38629 1.38629 1.38629
6172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6173 37 2.53331 3.02441 0.20344 2.88069 37 - -
6174 1.38629 1.38629 1.38629 1.38629
6175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6176 38 2.81865 0.23582 2.88868 2.35662 38 - -
6177 1.38629 1.38629 1.38629 1.38629
6178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6179 39 0.23862 2.84929 2.43386 2.70756 39 - -
6180 1.38629 1.38629 1.38629 1.38629
6181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6182 40 2.57915 2.25909 2.64442 0.28946 40 - -
6183 1.38629 1.38629 1.38629 1.38629
6184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6185 41 2.81865 0.23582 2.88868 2.35662 41 - -
6186 1.38629 1.38629 1.38629 1.38629
6187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6188 42 2.57915 2.25909 2.64442 0.28946 42 - -
6189 1.38629 1.38629 1.38629 1.38629
6190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6191 43 2.81865 0.23582 2.88868 2.35662 43 - -
6192 1.38629 1.38629 1.38629 1.38629
6193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6194 44 0.23862 2.84929 2.43386 2.70756 44 - -
6195 1.38629 1.38629 1.38629 1.38629
6196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6197 45 2.81865 0.23582 2.88868 2.35662 45 - -
6198 1.38629 1.38629 1.38629 1.38629
6199 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6200 //
6201 HMMER3/b [3.0 | March 2010]
6202 NAME 3_End_Tracheophyta_58S_end_sixteenc_long
6203 LENG 45
6204 ALPH DNA
6205 RF no
6206 CS no
6207 MAP yes
6208 DATE Sat Feb 18 01:00:32 2012
6209 NSEQ 2
6210 EFFN 2.000000
6211 CKSUM 3328582486
6212 STATS LOCAL MSV -7.5913 0.72754
6213 STATS LOCAL VITERBI -8.2420 0.72754
6214 STATS LOCAL FORWARD -3.2668 0.72754
6215 HMM A C G T
6216 m->m m->i m->d i->m i->i d->m d->d
6217 COMPO 1.58895 1.23335 1.11811 1.72796
6218 1.38629 1.38629 1.38629 1.38629
6219 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6220 1 2.53331 3.02441 0.20344 2.88069 1 - -
6221 1.38629 1.38629 1.38629 1.38629
6222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6223 2 2.81865 0.23582 2.88868 2.35662 2 - -
6224 1.38629 1.38629 1.38629 1.38629
6225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6226 3 2.81865 0.23582 2.88868 2.35662 3 - -
6227 1.38629 1.38629 1.38629 1.38629
6228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6229 4 2.81865 0.23582 2.88868 2.35662 4 - -
6230 1.38629 1.38629 1.38629 1.38629
6231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6232 5 2.53331 3.02441 0.20344 2.88069 5 - -
6233 1.38629 1.38629 1.38629 1.38629
6234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6235 6 0.23862 2.84929 2.43386 2.70756 6 - -
6236 1.38629 1.38629 1.38629 1.38629
6237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6238 7 0.23862 2.84929 2.43386 2.70756 7 - -
6239 1.38629 1.38629 1.38629 1.38629
6240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6241 8 2.53331 3.02441 0.20344 2.88069 8 - -
6242 1.38629 1.38629 1.38629 1.38629
6243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6244 9 2.81865 0.23582 2.88868 2.35662 9 - -
6245 1.38629 1.38629 1.38629 1.38629
6246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6247 10 2.81865 0.23582 2.88868 2.35662 10 - -
6248 1.38629 1.38629 1.38629 1.38629
6249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6250 11 0.23862 2.84929 2.43386 2.70756 11 - -
6251 1.38629 1.38629 1.38629 1.38629
6252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6253 12 2.57915 2.25909 2.64442 0.28946 12 - -
6254 1.38629 1.38629 1.38629 1.38629
6255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6256 13 2.81865 0.23582 2.88868 2.35662 13 - -
6257 1.38629 1.38629 1.38629 1.38629
6258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6259 14 2.15554 1.00938 2.23102 0.88601 14 - -
6260 1.38629 1.38629 1.38629 1.38629
6261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6262 15 2.53331 3.02441 0.20344 2.88069 15 - -
6263 1.38629 1.38629 1.38629 1.38629
6264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6265 16 2.53331 3.02441 0.20344 2.88069 16 - -
6266 1.38629 1.38629 1.38629 1.38629
6267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6268 17 2.81865 0.23582 2.88868 2.35662 17 - -
6269 1.38629 1.38629 1.38629 1.38629
6270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6271 18 2.81865 0.23582 2.88868 2.35662 18 - -
6272 1.38629 1.38629 1.38629 1.38629
6273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6274 19 2.53331 3.02441 0.20344 2.88069 19 - -
6275 1.38629 1.38629 1.38629 1.38629
6276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6277 20 0.23862 2.84929 2.43386 2.70756 20 - -
6278 1.38629 1.38629 1.38629 1.38629
6279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6280 21 2.53331 3.02441 0.20344 2.88069 21 - -
6281 1.38629 1.38629 1.38629 1.38629
6282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6283 22 2.53331 3.02441 0.20344 2.88069 22 - -
6284 1.38629 1.38629 1.38629 1.38629
6285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6286 23 2.53331 3.02441 0.20344 2.88069 23 - -
6287 1.38629 1.38629 1.38629 1.38629
6288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6289 24 2.81865 0.23582 2.88868 2.35662 24 - -
6290 1.38629 1.38629 1.38629 1.38629
6291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6292 25 0.23862 2.84929 2.43386 2.70756 25 - -
6293 1.38629 1.38629 1.38629 1.38629
6294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6295 26 2.81865 0.23582 2.88868 2.35662 26 - -
6296 1.38629 1.38629 1.38629 1.38629
6297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6298 27 2.53331 3.02441 0.20344 2.88069 27 - -
6299 1.38629 1.38629 1.38629 1.38629
6300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6301 28 2.57915 2.25909 2.64442 0.28946 28 - -
6302 1.38629 1.38629 1.38629 1.38629
6303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6304 29 2.81865 0.23582 2.88868 2.35662 29 - -
6305 1.38629 1.38629 1.38629 1.38629
6306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6307 30 2.57915 2.25909 2.64442 0.28946 30 - -
6308 1.38629 1.38629 1.38629 1.38629
6309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6310 31 2.53331 3.02441 0.20344 2.88069 31 - -
6311 1.38629 1.38629 1.38629 1.38629
6312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6313 32 2.81865 0.23582 2.88868 2.35662 32 - -
6314 1.38629 1.38629 1.38629 1.38629
6315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6316 33 2.81865 0.23582 2.88868 2.35662 33 - -
6317 1.38629 1.38629 1.38629 1.38629
6318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6319 34 2.57915 2.25909 2.64442 0.28946 34 - -
6320 1.38629 1.38629 1.38629 1.38629
6321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6322 35 2.53331 3.02441 0.20344 2.88069 35 - -
6323 1.38629 1.38629 1.38629 1.38629
6324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6325 36 2.53331 3.02441 0.20344 2.88069 36 - -
6326 1.38629 1.38629 1.38629 1.38629
6327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6328 37 2.53331 3.02441 0.20344 2.88069 37 - -
6329 1.38629 1.38629 1.38629 1.38629
6330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6331 38 2.57915 2.25909 2.64442 0.28946 38 - -
6332 1.38629 1.38629 1.38629 1.38629
6333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6334 39 2.53331 3.02441 0.20344 2.88069 39 - -
6335 1.38629 1.38629 1.38629 1.38629
6336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6337 40 2.57915 2.25909 2.64442 0.28946 40 - -
6338 1.38629 1.38629 1.38629 1.38629
6339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6340 41 2.81865 0.23582 2.88868 2.35662 41 - -
6341 1.38629 1.38629 1.38629 1.38629
6342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6343 42 0.23862 2.84929 2.43386 2.70756 42 - -
6344 1.38629 1.38629 1.38629 1.38629
6345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6346 43 0.23862 2.84929 2.43386 2.70756 43 - -
6347 1.38629 1.38629 1.38629 1.38629
6348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6349 44 2.53331 3.02441 0.20344 2.88069 44 - -
6350 1.38629 1.38629 1.38629 1.38629
6351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6352 45 0.23862 2.84929 2.43386 2.70756 45 - -
6353 1.38629 1.38629 1.38629 1.38629
6354 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6355 //
6356 HMMER3/b [3.0 | March 2010]
6357 NAME 3_End_Tracheophyta_58S_end_sixteend_long
6358 LENG 45
6359 ALPH DNA
6360 RF no
6361 CS no
6362 MAP yes
6363 DATE Sat Feb 18 01:00:44 2012
6364 NSEQ 2
6365 EFFN 2.000000
6366 CKSUM 2690199688
6367 STATS LOCAL MSV -7.4512 0.72744
6368 STATS LOCAL VITERBI -8.1553 0.72744
6369 STATS LOCAL FORWARD -3.0217 0.72744
6370 HMM A C G T
6371 m->m m->i m->d i->m i->i d->m d->d
6372 COMPO 1.52139 1.23657 1.11708 1.80803
6373 1.38629 1.38629 1.38629 1.38629
6374 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6375 1 2.53331 3.02441 0.20344 2.88069 1 - -
6376 1.38629 1.38629 1.38629 1.38629
6377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6378 2 2.81865 0.23582 2.88868 2.35662 2 - -
6379 1.38629 1.38629 1.38629 1.38629
6380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6381 3 2.81865 0.23582 2.88868 2.35662 3 - -
6382 1.38629 1.38629 1.38629 1.38629
6383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6384 4 2.81865 0.23582 2.88868 2.35662 4 - -
6385 1.38629 1.38629 1.38629 1.38629
6386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6387 5 2.53331 3.02441 0.20344 2.88069 5 - -
6388 1.38629 1.38629 1.38629 1.38629
6389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6390 6 0.23862 2.84929 2.43386 2.70756 6 - -
6391 1.38629 1.38629 1.38629 1.38629
6392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6393 7 0.23862 2.84929 2.43386 2.70756 7 - -
6394 1.38629 1.38629 1.38629 1.38629
6395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6396 8 2.53331 3.02441 0.20344 2.88069 8 - -
6397 1.38629 1.38629 1.38629 1.38629
6398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6399 9 2.81865 0.23582 2.88868 2.35662 9 - -
6400 1.38629 1.38629 1.38629 1.38629
6401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6402 10 2.81865 0.23582 2.88868 2.35662 10 - -
6403 1.38629 1.38629 1.38629 1.38629
6404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6405 11 0.23862 2.84929 2.43386 2.70756 11 - -
6406 1.38629 1.38629 1.38629 1.38629
6407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6408 12 2.57915 2.25909 2.64442 0.28946 12 - -
6409 1.38629 1.38629 1.38629 1.38629
6410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6411 13 2.53331 3.02441 0.20344 2.88069 13 - -
6412 1.38629 1.38629 1.38629 1.38629
6413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6414 14 0.23862 2.84929 2.43386 2.70756 14 - -
6415 1.38629 1.38629 1.38629 1.38629
6416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6417 15 2.53331 3.02441 0.20344 2.88069 15 - -
6418 1.38629 1.38629 1.38629 1.38629
6419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6420 16 2.53331 3.02441 0.20344 2.88069 16 - -
6421 1.38629 1.38629 1.38629 1.38629
6422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6423 17 2.81865 0.23582 2.88868 2.35662 17 - -
6424 1.38629 1.38629 1.38629 1.38629
6425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6426 18 2.81865 0.23582 2.88868 2.35662 18 - -
6427 1.38629 1.38629 1.38629 1.38629
6428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6429 19 2.53331 3.02441 0.20344 2.88069 19 - -
6430 1.38629 1.38629 1.38629 1.38629
6431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6432 20 0.23862 2.84929 2.43386 2.70756 20 - -
6433 1.38629 1.38629 1.38629 1.38629
6434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6435 21 2.53331 3.02441 0.20344 2.88069 21 - -
6436 1.38629 1.38629 1.38629 1.38629
6437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6438 22 2.53331 3.02441 0.20344 2.88069 22 - -
6439 1.38629 1.38629 1.38629 1.38629
6440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6441 23 2.53331 3.02441 0.20344 2.88069 23 - -
6442 1.38629 1.38629 1.38629 1.38629
6443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6444 24 2.81865 0.23582 2.88868 2.35662 24 - -
6445 1.38629 1.38629 1.38629 1.38629
6446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6447 25 0.23862 2.84929 2.43386 2.70756 25 - -
6448 1.38629 1.38629 1.38629 1.38629
6449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6450 26 2.81865 0.23582 2.88868 2.35662 26 - -
6451 1.38629 1.38629 1.38629 1.38629
6452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6453 27 2.53331 3.02441 0.20344 2.88069 27 - -
6454 1.38629 1.38629 1.38629 1.38629
6455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6456 28 2.15554 1.00938 2.23102 0.88601 28 - -
6457 1.38629 1.38629 1.38629 1.38629
6458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6459 29 2.81865 0.23582 2.88868 2.35662 29 - -
6460 1.38629 1.38629 1.38629 1.38629
6461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6462 30 2.57915 2.25909 2.64442 0.28946 30 - -
6463 1.38629 1.38629 1.38629 1.38629
6464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6465 31 2.53331 3.02441 0.20344 2.88069 31 - -
6466 1.38629 1.38629 1.38629 1.38629
6467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6468 32 2.81865 0.23582 2.88868 2.35662 32 - -
6469 1.38629 1.38629 1.38629 1.38629
6470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6471 33 2.81865 0.23582 2.88868 2.35662 33 - -
6472 1.38629 1.38629 1.38629 1.38629
6473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6474 34 2.57915 2.25909 2.64442 0.28946 34 - -
6475 1.38629 1.38629 1.38629 1.38629
6476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6477 35 2.53331 3.02441 0.20344 2.88069 35 - -
6478 1.38629 1.38629 1.38629 1.38629
6479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6480 36 2.53331 3.02441 0.20344 2.88069 36 - -
6481 1.38629 1.38629 1.38629 1.38629
6482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6483 37 2.53331 3.02441 0.20344 2.88069 37 - -
6484 1.38629 1.38629 1.38629 1.38629
6485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6486 38 2.57915 2.25909 2.64442 0.28946 38 - -
6487 1.38629 1.38629 1.38629 1.38629
6488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6489 39 2.53331 3.02441 0.20344 2.88069 39 - -
6490 1.38629 1.38629 1.38629 1.38629
6491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6492 40 2.57915 2.25909 2.64442 0.28946 40 - -
6493 1.38629 1.38629 1.38629 1.38629
6494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6495 41 2.81865 0.23582 2.88868 2.35662 41 - -
6496 1.38629 1.38629 1.38629 1.38629
6497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6498 42 0.23862 2.84929 2.43386 2.70756 42 - -
6499 1.38629 1.38629 1.38629 1.38629
6500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6501 43 2.81865 0.23582 2.88868 2.35662 43 - -
6502 1.38629 1.38629 1.38629 1.38629
6503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6504 44 0.23862 2.84929 2.43386 2.70756 44 - -
6505 1.38629 1.38629 1.38629 1.38629
6506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6507 45 0.23862 2.84929 2.43386 2.70756 45 - -
6508 1.38629 1.38629 1.38629 1.38629
6509 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6510 //
6511 HMMER3/b [3.0 | March 2010]
6512 NAME 3_End_Tracheophyta_58S_end_sixteene_long
6513 LENG 45
6514 ALPH DNA
6515 RF no
6516 CS no
6517 MAP yes
6518 DATE Sat Feb 18 01:00:52 2012
6519 NSEQ 2
6520 EFFN 2.000000
6521 CKSUM 1246193707
6522 STATS LOCAL MSV -7.6594 0.72693
6523 STATS LOCAL VITERBI -8.3817 0.72693
6524 STATS LOCAL FORWARD -3.2424 0.72693
6525 HMM A C G T
6526 m->m m->i m->d i->m i->i d->m d->d
6527 COMPO 1.67229 1.06970 1.17261 1.83562
6528 1.38629 1.38629 1.38629 1.38629
6529 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
6530 1 2.53331 3.02441 0.20344 2.88069 1 - -
6531 1.38629 1.38629 1.38629 1.38629
6532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6533 2 2.81865 0.23582 2.88868 2.35662 2 - -
6534 1.38629 1.38629 1.38629 1.38629
6535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6536 3 2.81865 0.23582 2.88868 2.35662 3 - -
6537 1.38629 1.38629 1.38629 1.38629
6538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6539 4 2.81865 0.23582 2.88868 2.35662 4 - -
6540 1.38629 1.38629 1.38629 1.38629
6541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6542 5 0.23862 2.84929 2.43386 2.70756 5 - -
6543 1.38629 1.38629 1.38629 1.38629
6544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6545 6 0.23862 2.84929 2.43386 2.70756 6 - -
6546 1.38629 1.38629 1.38629 1.38629
6547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6548 7 0.23862 2.84929 2.43386 2.70756 7 - -
6549 1.38629 1.38629 1.38629 1.38629
6550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6551 8 2.53331 3.02441 0.20344 2.88069 8 - -
6552 1.38629 1.38629 1.38629 1.38629
6553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6554 9 2.81865 0.23582 2.88868 2.35662 9 - -
6555 1.38629 1.38629 1.38629 1.38629
6556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6557 10 2.81865 0.23582 2.88868 2.35662 10 - -
6558 1.38629 1.38629 1.38629 1.38629
6559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6560 11 0.23862 2.84929 2.43386 2.70756 11 - -
6561 1.38629 1.38629 1.38629 1.38629
6562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6563 12 2.57915 2.25909 2.64442 0.28946 12 - -
6564 1.38629 1.38629 1.38629 1.38629
6565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6566 13 2.81865 0.23582 2.88868 2.35662 13 - -
6567 1.38629 1.38629 1.38629 1.38629
6568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6569 14 2.81865 0.23582 2.88868 2.35662 14 - -
6570 1.38629 1.38629 1.38629 1.38629
6571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6572 15 2.53331 3.02441 0.20344 2.88069 15 - -
6573 1.38629 1.38629 1.38629 1.38629
6574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6575 16 2.53331 3.02441 0.20344 2.88069 16 - -
6576 1.38629 1.38629 1.38629 1.38629
6577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6578 17 2.81865 0.23582 2.88868 2.35662 17 - -
6579 1.38629 1.38629 1.38629 1.38629
6580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6581 18 2.57915 2.25909 2.64442 0.28946 18 - -
6582 1.38629 1.38629 1.38629 1.38629
6583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6584 19 2.53331 3.02441 0.20344 2.88069 19 - -
6585 1.38629 1.38629 1.38629 1.38629
6586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6587 20 0.23862 2.84929 2.43386 2.70756 20 - -
6588 1.38629 1.38629 1.38629 1.38629
6589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6590 21 2.53331 3.02441 0.20344 2.88069 21 - -
6591 1.38629 1.38629 1.38629 1.38629
6592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6593 22 2.53331 3.02441 0.20344 2.88069 22 - -
6594 1.38629 1.38629 1.38629 1.38629
6595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6596 23 2.53331 3.02441 0.20344 2.88069 23 - -
6597 1.38629 1.38629 1.38629 1.38629
6598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6599 24 2.81865 0.23582 2.88868 2.35662 24 - -
6600 1.38629 1.38629 1.38629 1.38629
6601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6602 25 0.23862 2.84929 2.43386 2.70756 25 - -
6603 1.38629 1.38629 1.38629 1.38629
6604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6605 26 2.81865 0.23582 2.88868 2.35662 26 - -
6606 1.38629 1.38629 1.38629 1.38629
6607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6608 27 2.53331 3.02441 0.20344 2.88069 27 - -
6609 1.38629 1.38629 1.38629 1.38629
6610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6611 28 2.81865 0.23582 2.88868 2.35662 28 - -
6612 1.38629 1.38629 1.38629 1.38629
6613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6614 29 2.81865 0.23582 2.88868 2.35662 29 - -
6615 1.38629 1.38629 1.38629 1.38629
6616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6617 30 2.57915 2.25909 2.64442 0.28946 30 - -
6618 1.38629 1.38629 1.38629 1.38629
6619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6620 31 2.53331 3.02441 0.20344 2.88069 31 - -
6621 1.38629 1.38629 1.38629 1.38629
6622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6623 32 2.81865 0.23582 2.88868 2.35662 32 - -
6624 1.38629 1.38629 1.38629 1.38629
6625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6626 33 2.81865 0.23582 2.88868 2.35662 33 - -
6627 1.38629 1.38629 1.38629 1.38629
6628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6629 34 2.57915 2.25909 2.64442 0.28946 34 - -
6630 1.38629 1.38629 1.38629 1.38629
6631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6632 35 2.53331 3.02441 0.20344 2.88069 35 - -
6633 1.38629 1.38629 1.38629 1.38629
6634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6635 36 2.53331 3.02441 0.20344 2.88069 36 - -
6636 1.38629 1.38629 1.38629 1.38629
6637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6638 37 2.53331 3.02441 0.20344 2.88069 37 - -
6639 1.38629 1.38629 1.38629 1.38629
6640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6641 38 2.81865 0.23582 2.88868 2.35662 38 - -
6642 1.38629 1.38629 1.38629 1.38629
6643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6644 39 2.53331 3.02441 0.20344 2.88069 39 - -
6645 1.38629 1.38629 1.38629 1.38629
6646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6647 40 2.57915 2.25909 2.64442 0.28946 40 - -
6648 1.38629 1.38629 1.38629 1.38629
6649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6650 41 2.81865 0.23582 2.88868 2.35662 41 - -
6651 1.38629 1.38629 1.38629 1.38629
6652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6653 42 0.23862 2.84929 2.43386 2.70756 42 - -
6654 1.38629 1.38629 1.38629 1.38629
6655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6656 43 2.81865 0.23582 2.88868 2.35662 43 - -
6657 1.38629 1.38629 1.38629 1.38629
6658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6659 44 2.53331 3.02441 0.20344 2.88069 44 - -
6660 1.38629 1.38629 1.38629 1.38629
6661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6662 45 2.81865 0.23582 2.88868 2.35662 45 - -
6663 1.38629 1.38629 1.38629 1.38629
6664 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6665 //
6666 HMMER3/b [3.0 | March 2010]
6667 NAME 3_End_Tracheophyta_58S_end_sixteenf_long
6668 LENG 45
6669 ALPH DNA
6670 RF no
6671 CS no
6672 MAP yes
6673 DATE Sat Feb 18 01:00:59 2012
6674 NSEQ 4
6675 EFFN 3.324219
6676 CKSUM 2175191417
6677 STATS LOCAL MSV -8.1113 0.71931
6678 STATS LOCAL VITERBI -7.7973 0.71931
6679 STATS LOCAL FORWARD -4.0579 0.71931
6680 HMM A C G T
6681 m->m m->i m->d i->m i->i d->m d->d
6682 COMPO 1.81924 1.35994 1.13918 1.34288
6683 1.38629 1.38629 1.38629 1.38629
6684 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
6685 1 2.94787 3.58826 0.11710 3.49298 1 - -
6686 1.38629 1.38629 1.38629 1.38629
6687 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6688 2 3.43368 0.13014 3.48311 2.82941 2 - -
6689 1.38629 1.38629 1.38629 1.38629
6690 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6691 3 3.43368 0.13014 3.48311 2.82941 3 - -
6692 1.38629 1.38629 1.38629 1.38629
6693 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6694 4 3.43368 0.13014 3.48311 2.82941 4 - -
6695 1.38629 1.38629 1.38629 1.38629
6696 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6697 5 2.94787 3.58826 0.11710 3.49298 5 - -
6698 1.38629 1.38629 1.38629 1.38629
6699 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6700 6 0.14183 3.38076 2.80224 3.28247 6 - -
6701 1.38629 1.38629 1.38629 1.38629
6702 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6703 7 0.14183 3.38076 2.80224 3.28247 7 - -
6704 1.38629 1.38629 1.38629 1.38629
6705 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6706 8 2.94787 3.58826 0.11710 3.49298 8 - -
6707 1.38629 1.38629 1.38629 1.38629
6708 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6709 9 3.43368 0.13014 3.48311 2.82941 9 - -
6710 1.38629 1.38629 1.38629 1.38629
6711 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6712 10 3.43368 0.13014 3.48311 2.82941 10 - -
6713 1.38629 1.38629 1.38629 1.38629
6714 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6715 11 3.08911 2.59546 3.13724 0.17860 11 - -
6716 1.38629 1.38629 1.38629 1.38629
6717 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6718 12 3.08911 2.59546 3.13724 0.17860 12 - -
6719 1.38629 1.38629 1.38629 1.38629
6720 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6721 13 3.08911 2.59546 3.13724 0.17860 13 - -
6722 1.38629 1.38629 1.38629 1.38629
6723 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6724 14 2.40564 0.95744 2.47775 0.81648 14 - -
6725 1.38629 1.38629 1.38629 1.38629
6726 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6727 15 2.94787 3.58826 0.11710 3.49298 15 - -
6728 1.38629 1.38629 1.38629 1.38629
6729 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6730 16 2.94787 3.58826 0.11710 3.49298 16 - -
6731 1.38629 1.38629 1.38629 1.38629
6732 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6733 17 3.08911 2.59546 3.13724 0.17860 17 - -
6734 1.38629 1.38629 1.38629 1.38629
6735 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6736 18 3.08911 2.59546 3.13724 0.17860 18 - -
6737 1.38629 1.38629 1.38629 1.38629
6738 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6739 19 2.94787 3.58826 0.11710 3.49298 19 - -
6740 1.38629 1.38629 1.38629 1.38629
6741 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6742 20 0.14183 3.38076 2.80224 3.28247 20 - -
6743 1.38629 1.38629 1.38629 1.38629
6744 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6745 21 2.94787 3.58826 0.11710 3.49298 21 - -
6746 1.38629 1.38629 1.38629 1.38629
6747 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6748 22 2.94787 3.58826 0.11710 3.49298 22 - -
6749 1.38629 1.38629 1.38629 1.38629
6750 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6751 23 2.94787 3.58826 0.11710 3.49298 23 - -
6752 1.38629 1.38629 1.38629 1.38629
6753 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6754 24 3.43368 0.13014 3.48311 2.82941 24 - -
6755 1.38629 1.38629 1.38629 1.38629
6756 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6757 25 0.14183 3.38076 2.80224 3.28247 25 - -
6758 1.38629 1.38629 1.38629 1.38629
6759 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6760 26 3.43368 0.13014 3.48311 2.82941 26 - -
6761 1.38629 1.38629 1.38629 1.38629
6762 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6763 27 2.94787 3.58826 0.11710 3.49298 27 - -
6764 1.38629 1.38629 1.38629 1.38629
6765 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6766 28 3.08911 2.59546 3.13724 0.17860 28 - -
6767 1.38629 1.38629 1.38629 1.38629
6768 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6769 29 3.43368 0.13014 3.48311 2.82941 29 - -
6770 1.38629 1.38629 1.38629 1.38629
6771 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6772 30 3.08911 2.59546 3.13724 0.17860 30 - -
6773 1.38629 1.38629 1.38629 1.38629
6774 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6775 31 2.94787 3.58826 0.11710 3.49298 31 - -
6776 1.38629 1.38629 1.38629 1.38629
6777 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6778 32 3.43368 0.13014 3.48311 2.82941 32 - -
6779 1.38629 1.38629 1.38629 1.38629
6780 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6781 33 3.43368 0.13014 3.48311 2.82941 33 - -
6782 1.38629 1.38629 1.38629 1.38629
6783 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6784 34 3.08911 2.59546 3.13724 0.17860 34 - -
6785 1.38629 1.38629 1.38629 1.38629
6786 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6787 35 2.94787 3.58826 0.11710 3.49298 35 - -
6788 1.38629 1.38629 1.38629 1.38629
6789 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6790 36 2.94787 3.58826 0.11710 3.49298 36 - -
6791 1.38629 1.38629 1.38629 1.38629
6792 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6793 37 2.94787 3.58826 0.11710 3.49298 37 - -
6794 1.38629 1.38629 1.38629 1.38629
6795 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6796 38 3.08911 2.59546 3.13724 0.17860 38 - -
6797 1.38629 1.38629 1.38629 1.38629
6798 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6799 39 2.94787 3.58826 0.11710 3.49298 39 - -
6800 1.38629 1.38629 1.38629 1.38629
6801 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6802 40 3.08911 2.59546 3.13724 0.17860 40 - -
6803 1.38629 1.38629 1.38629 1.38629
6804 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6805 41 3.43368 0.13014 3.48311 2.82941 41 - -
6806 1.38629 1.38629 1.38629 1.38629
6807 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6808 42 0.14183 3.38076 2.80224 3.28247 42 - -
6809 1.38629 1.38629 1.38629 1.38629
6810 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6811 43 3.08911 2.59546 3.13724 0.17860 43 - -
6812 1.38629 1.38629 1.38629 1.38629
6813 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6814 44 0.14183 3.38076 2.80224 3.28247 44 - -
6815 1.38629 1.38629 1.38629 1.38629
6816 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
6817 45 3.08911 2.59546 3.13724 0.17860 45 - -
6818 1.38629 1.38629 1.38629 1.38629
6819 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
6820 //
6821 HMMER3/b [3.0 | March 2010]
6822 NAME 3_End_Tracheophyta_58S_end_sixteeng_long
6823 LENG 45
6824 ALPH DNA
6825 RF no
6826 CS no
6827 MAP yes
6828 DATE Sat Feb 18 01:01:05 2012
6829 NSEQ 259
6830 EFFN 5.876663
6831 CKSUM 2080383098
6832 STATS LOCAL MSV -6.8494 0.71932
6833 STATS LOCAL VITERBI -7.5742 0.71932
6834 STATS LOCAL FORWARD -3.8484 0.71932
6835 HMM A C G T
6836 m->m m->i m->d i->m i->i d->m d->d
6837 COMPO 1.87146 1.09869 1.04791 1.81939
6838 1.38629 1.38629 1.38629 1.38629
6839 0.02507 4.39156 4.39156 1.46634 0.26236 0.00000 *
6840 1 3.25652 3.98041 0.09166 3.49372 1 - -
6841 1.38629 1.38629 1.38629 1.38629
6842 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6843 2 4.05846 0.07481 4.07906 3.27320 2 - -
6844 1.38629 1.38629 1.38629 1.38629
6845 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6846 3 4.05846 0.07481 4.07906 3.27320 3 - -
6847 1.38629 1.38629 1.38629 1.38629
6848 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6849 4 3.38016 0.16154 3.62148 2.42607 4 - -
6850 1.38629 1.38629 1.38629 1.38629
6851 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6852 5 2.10689 3.33236 0.21172 3.39658 5 - -
6853 1.38629 1.38629 1.38629 1.38629
6854 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6855 6 0.09953 3.84657 3.13639 3.50842 6 - -
6856 1.38629 1.38629 1.38629 1.38629
6857 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6858 7 0.58852 1.86574 1.96016 1.90225 7 - -
6859 1.38629 1.38629 1.38629 1.38629
6860 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6861 8 3.11584 4.08330 0.08205 4.04115 8 - -
6862 1.38629 1.38629 1.38629 1.38629
6863 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6864 9 3.98375 0.08968 4.00891 3.01571 9 - -
6865 1.38629 1.38629 1.38629 1.38629
6866 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6867 10 4.05846 0.07481 4.07906 3.27320 10 - -
6868 1.38629 1.38629 1.38629 1.38629
6869 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6870 11 1.04282 2.08610 1.36256 1.31913 11 - -
6871 1.38629 1.38629 1.38629 1.38629
6872 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6873 12 3.24936 2.16890 3.03079 0.22487 12 - -
6874 1.38629 1.38629 1.38629 1.38629
6875 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6876 13 2.50608 0.69859 2.71663 1.03556 13 - -
6877 1.38629 1.38629 1.38629 1.38629
6878 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6879 14 0.58777 2.03139 1.77080 1.94430 14 - -
6880 1.38629 1.38629 1.38629 1.38629
6881 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6882 15 3.31584 4.12580 0.07173 4.08866 15 - -
6883 1.38629 1.38629 1.38629 1.38629
6884 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6885 16 3.31584 4.12580 0.07173 4.08866 16 - -
6886 1.38629 1.38629 1.38629 1.38629
6887 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6888 17 3.43429 0.22420 3.48624 1.98066 17 - -
6889 1.38629 1.38629 1.38629 1.38629
6890 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6891 18 2.47272 0.88431 2.68831 0.83322 18 - -
6892 1.38629 1.38629 1.38629 1.38629
6893 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6894 19 2.85814 3.67483 0.12005 3.49358 19 - -
6895 1.38629 1.38629 1.38629 1.38629
6896 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6897 20 0.08513 3.94327 3.17054 3.89984 20 - -
6898 1.38629 1.38629 1.38629 1.38629
6899 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6900 21 3.31584 4.12580 0.07173 4.08866 21 - -
6901 1.38629 1.38629 1.38629 1.38629
6902 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6903 22 3.31584 4.12580 0.07173 4.08866 22 - -
6904 1.38629 1.38629 1.38629 1.38629
6905 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6906 23 3.31584 4.12580 0.07173 4.08866 23 - -
6907 1.38629 1.38629 1.38629 1.38629
6908 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6909 24 4.05846 0.07481 4.07906 3.27320 24 - -
6910 1.38629 1.38629 1.38629 1.38629
6911 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6912 25 0.10856 3.36623 3.11658 3.72778 25 - -
6913 1.38629 1.38629 1.38629 1.38629
6914 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6915 26 4.05846 0.07481 4.07906 3.27320 26 - -
6916 1.38629 1.38629 1.38629 1.38629
6917 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6918 27 3.31584 4.12580 0.07173 4.08866 27 - -
6919 1.38629 1.38629 1.38629 1.38629
6920 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6921 28 2.82645 0.90413 2.89292 0.73299 28 - -
6922 1.38629 1.38629 1.38629 1.38629
6923 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6924 29 4.05846 0.07481 4.07906 3.27320 29 - -
6925 1.38629 1.38629 1.38629 1.38629
6926 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6927 30 3.69746 2.98870 3.72201 0.10461 30 - -
6928 1.38629 1.38629 1.38629 1.38629
6929 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6930 31 3.31584 4.12580 0.07173 4.08866 31 - -
6931 1.38629 1.38629 1.38629 1.38629
6932 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6933 32 4.05846 0.07481 4.07906 3.27320 32 - -
6934 1.38629 1.38629 1.38629 1.38629
6935 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6936 33 3.99165 0.08810 4.01633 3.03977 33 - -
6937 1.38629 1.38629 1.38629 1.38629
6938 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6939 34 3.69746 2.98870 3.72201 0.10461 34 - -
6940 1.38629 1.38629 1.38629 1.38629
6941 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6942 35 3.31584 4.12580 0.07173 4.08866 35 - -
6943 1.38629 1.38629 1.38629 1.38629
6944 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6945 36 3.31584 4.12580 0.07173 4.08866 36 - -
6946 1.38629 1.38629 1.38629 1.38629
6947 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6948 37 3.31584 4.12580 0.07173 4.08866 37 - -
6949 1.38629 1.38629 1.38629 1.38629
6950 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6951 38 2.82444 0.75591 2.89169 0.87805 38 - -
6952 1.38629 1.38629 1.38629 1.38629
6953 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6954 39 3.11214 4.08241 0.08226 4.04015 39 - -
6955 1.38629 1.38629 1.38629 1.38629
6956 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6957 40 3.69746 2.98870 3.72201 0.10461 40 - -
6958 1.38629 1.38629 1.38629 1.38629
6959 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6960 41 4.01227 0.08399 4.03568 3.10564 41 - -
6961 1.38629 1.38629 1.38629 1.38629
6962 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6963 42 0.15862 3.32760 2.98983 2.80508 42 - -
6964 1.38629 1.38629 1.38629 1.38629
6965 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6966 43 3.41107 0.16215 3.37951 2.49351 43 - -
6967 1.38629 1.38629 1.38629 1.38629
6968 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6969 44 2.11068 3.32108 0.21182 3.39258 44 - -
6970 1.38629 1.38629 1.38629 1.38629
6971 0.02507 4.39156 4.39156 1.46634 0.26236 1.09861 0.40547
6972 45 1.65342 0.56510 2.50870 1.83929 45 - -
6973 1.38629 1.38629 1.38629 1.38629
6974 0.01262 4.37911 * 1.46634 0.26236 0.00000 *
6975 //
6976 HMMER3/b [3.0 | March 2010]
6977 NAME 3_End_Tracheophyta_58S_end_ten_long
6978 LENG 45
6979 ALPH DNA
6980 RF no
6981 CS no
6982 MAP yes
6983 DATE Sat Feb 18 00:57:35 2012
6984 NSEQ 5
6985 EFFN 3.413086
6986 CKSUM 238757557
6987 STATS LOCAL MSV -7.3971 0.71933
6988 STATS LOCAL VITERBI -7.6738 0.71933
6989 STATS LOCAL FORWARD -3.6720 0.71933
6990 HMM A C G T
6991 m->m m->i m->d i->m i->i d->m d->d
6992 COMPO 1.81443 1.10894 1.07074 1.80542
6993 1.38629 1.38629 1.38629 1.38629
6994 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 *
6995 1 2.96731 3.61661 0.11405 3.52429 1 - -
6996 1.38629 1.38629 1.38629 1.38629
6997 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
6998 2 3.46593 0.12636 3.51399 2.85283 2 - -
6999 1.38629 1.38629 1.38629 1.38629
7000 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7001 3 3.46593 0.12636 3.51399 2.85283 3 - -
7002 1.38629 1.38629 1.38629 1.38629
7003 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7004 4 3.46593 0.12636 3.51399 2.85283 4 - -
7005 1.38629 1.38629 1.38629 1.38629
7006 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7007 5 2.96731 3.61661 0.11405 3.52429 5 - -
7008 1.38629 1.38629 1.38629 1.38629
7009 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7010 6 0.13819 3.40877 2.82041 3.31315 6 - -
7011 1.38629 1.38629 1.38629 1.38629
7012 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7013 7 0.13819 3.40877 2.82041 3.31315 7 - -
7014 1.38629 1.38629 1.38629 1.38629
7015 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7016 8 2.96731 3.61661 0.11405 3.52429 8 - -
7017 1.38629 1.38629 1.38629 1.38629
7018 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7019 9 3.46593 0.12636 3.51399 2.85283 9 - -
7020 1.38629 1.38629 1.38629 1.38629
7021 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7022 10 3.46593 0.12636 3.51399 2.85283 10 - -
7023 1.38629 1.38629 1.38629 1.38629
7024 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7025 11 3.11748 2.61349 3.16453 0.17409 11 - -
7026 1.38629 1.38629 1.38629 1.38629
7027 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7028 12 3.11748 2.61349 3.16453 0.17409 12 - -
7029 1.38629 1.38629 1.38629 1.38629
7030 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7031 13 0.13819 3.40877 2.82041 3.31315 13 - -
7032 1.38629 1.38629 1.38629 1.38629
7033 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7034 14 2.13860 2.15474 1.21038 0.75894 14 - -
7035 1.38629 1.38629 1.38629 1.38629
7036 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7037 15 2.96731 3.61661 0.11405 3.52429 15 - -
7038 1.38629 1.38629 1.38629 1.38629
7039 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7040 16 2.96731 3.61661 0.11405 3.52429 16 - -
7041 1.38629 1.38629 1.38629 1.38629
7042 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7043 17 2.45133 0.72657 2.52364 1.04957 17 - -
7044 1.38629 1.38629 1.38629 1.38629
7045 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7046 18 3.46593 0.12636 3.51399 2.85283 18 - -
7047 1.38629 1.38629 1.38629 1.38629
7048 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7049 19 2.96731 3.61661 0.11405 3.52429 19 - -
7050 1.38629 1.38629 1.38629 1.38629
7051 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7052 20 0.13819 3.40877 2.82041 3.31315 20 - -
7053 1.38629 1.38629 1.38629 1.38629
7054 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7055 21 2.96731 3.61661 0.11405 3.52429 21 - -
7056 1.38629 1.38629 1.38629 1.38629
7057 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7058 22 2.96731 3.61661 0.11405 3.52429 22 - -
7059 1.38629 1.38629 1.38629 1.38629
7060 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7061 23 2.96731 3.61661 0.11405 3.52429 23 - -
7062 1.38629 1.38629 1.38629 1.38629
7063 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7064 24 3.46593 0.12636 3.51399 2.85283 24 - -
7065 1.38629 1.38629 1.38629 1.38629
7066 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7067 25 0.13819 3.40877 2.82041 3.31315 25 - -
7068 1.38629 1.38629 1.38629 1.38629
7069 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7070 26 3.46593 0.12636 3.51399 2.85283 26 - -
7071 1.38629 1.38629 1.38629 1.38629
7072 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7073 27 2.96731 3.61661 0.11405 3.52429 27 - -
7074 1.38629 1.38629 1.38629 1.38629
7075 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7076 28 2.46209 1.18607 2.53225 0.63517 28 - -
7077 1.38629 1.38629 1.38629 1.38629
7078 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7079 29 3.46593 0.12636 3.51399 2.85283 29 - -
7080 1.38629 1.38629 1.38629 1.38629
7081 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7082 30 3.11748 2.61349 3.16453 0.17409 30 - -
7083 1.38629 1.38629 1.38629 1.38629
7084 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7085 31 2.96731 3.61661 0.11405 3.52429 31 - -
7086 1.38629 1.38629 1.38629 1.38629
7087 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7088 32 3.46593 0.12636 3.51399 2.85283 32 - -
7089 1.38629 1.38629 1.38629 1.38629
7090 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7091 33 3.46593 0.12636 3.51399 2.85283 33 - -
7092 1.38629 1.38629 1.38629 1.38629
7093 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7094 34 3.11748 2.61349 3.16453 0.17409 34 - -
7095 1.38629 1.38629 1.38629 1.38629
7096 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7097 35 2.96731 3.61661 0.11405 3.52429 35 - -
7098 1.38629 1.38629 1.38629 1.38629
7099 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7100 36 2.96731 3.61661 0.11405 3.52429 36 - -
7101 1.38629 1.38629 1.38629 1.38629
7102 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7103 37 2.96731 3.61661 0.11405 3.52429 37 - -
7104 1.38629 1.38629 1.38629 1.38629
7105 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7106 38 3.46593 0.12636 3.51399 2.85283 38 - -
7107 1.38629 1.38629 1.38629 1.38629
7108 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7109 39 2.96731 3.61661 0.11405 3.52429 39 - -
7110 1.38629 1.38629 1.38629 1.38629
7111 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7112 40 3.11748 2.61349 3.16453 0.17409 40 - -
7113 1.38629 1.38629 1.38629 1.38629
7114 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7115 41 3.46593 0.12636 3.51399 2.85283 41 - -
7116 1.38629 1.38629 1.38629 1.38629
7117 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7118 42 0.13819 3.40877 2.82041 3.31315 42 - -
7119 1.38629 1.38629 1.38629 1.38629
7120 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7121 43 3.46593 0.12636 3.51399 2.85283 43 - -
7122 1.38629 1.38629 1.38629 1.38629
7123 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7124 44 2.96731 3.61661 0.11405 3.52429 44 - -
7125 1.38629 1.38629 1.38629 1.38629
7126 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
7127 45 3.46593 0.12636 3.51399 2.85283 45 - -
7128 1.38629 1.38629 1.38629 1.38629
7129 0.01831 4.00971 * 1.46634 0.26236 0.00000 *
7130 //
7131 HMMER3/b [3.0 | March 2010]
7132 NAME 3_End_Tracheophyta_58S_end_thirteen_long
7133 LENG 45
7134 ALPH DNA
7135 RF no
7136 CS no
7137 MAP yes
7138 DATE Sat Feb 18 00:58:21 2012
7139 NSEQ 14
7140 EFFN 3.250488
7141 CKSUM 2478405586
7142 STATS LOCAL MSV -8.0795 0.71932
7143 STATS LOCAL VITERBI -7.7238 0.71932
7144 STATS LOCAL FORWARD -3.7587 0.71932
7145 HMM A C G T
7146 m->m m->i m->d i->m i->i d->m d->d
7147 COMPO 2.03469 1.11219 1.04046 1.67584
7148 1.38629 1.38629 1.38629 1.38629
7149 0.03738 3.99829 3.99829 1.46634 0.26236 0.00000 *
7150 1 2.93114 3.56396 0.11980 3.46618 1 - -
7151 1.38629 1.38629 1.38629 1.38629
7152 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7153 2 3.40613 0.13347 3.45673 2.80932 2 - -
7154 1.38629 1.38629 1.38629 1.38629
7155 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7156 3 3.40613 0.13347 3.45673 2.80932 3 - -
7157 1.38629 1.38629 1.38629 1.38629
7158 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7159 4 3.40613 0.13347 3.45673 2.80932 4 - -
7160 1.38629 1.38629 1.38629 1.38629
7161 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7162 5 2.93114 3.56396 0.11980 3.46618 5 - -
7163 1.38629 1.38629 1.38629 1.38629
7164 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7165 6 0.14502 3.35687 2.78670 3.25633 6 - -
7166 1.38629 1.38629 1.38629 1.38629
7167 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7168 7 2.93114 3.56396 0.11980 3.46618 7 - -
7169 1.38629 1.38629 1.38629 1.38629
7170 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7171 8 2.93114 3.56396 0.11980 3.46618 8 - -
7172 1.38629 1.38629 1.38629 1.38629
7173 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7174 9 3.40613 0.13347 3.45673 2.80932 9 - -
7175 1.38629 1.38629 1.38629 1.38629
7176 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7177 10 3.40613 0.13347 3.45673 2.80932 10 - -
7178 1.38629 1.38629 1.38629 1.38629
7179 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7180 11 3.06506 2.58015 3.11411 0.18252 11 - -
7181 1.38629 1.38629 1.38629 1.38629
7182 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7183 12 3.40613 0.13347 3.45673 2.80932 12 - -
7184 1.38629 1.38629 1.38629 1.38629
7185 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7186 13 1.67950 0.50222 2.40121 2.13927 13 - -
7187 1.38629 1.38629 1.38629 1.38629
7188 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7189 14 3.06506 2.58015 3.11411 0.18252 14 - -
7190 1.38629 1.38629 1.38629 1.38629
7191 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7192 15 2.93114 3.56396 0.11980 3.46618 15 - -
7193 1.38629 1.38629 1.38629 1.38629
7194 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7195 16 2.93114 3.56396 0.11980 3.46618 16 - -
7196 1.38629 1.38629 1.38629 1.38629
7197 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7198 17 2.62030 1.64607 2.68493 0.40618 17 - -
7199 1.38629 1.38629 1.38629 1.38629
7200 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7201 18 3.40613 0.13347 3.45673 2.80932 18 - -
7202 1.38629 1.38629 1.38629 1.38629
7203 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7204 19 2.93114 3.56396 0.11980 3.46618 19 - -
7205 1.38629 1.38629 1.38629 1.38629
7206 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7207 20 0.14502 3.35687 2.78670 3.25633 20 - -
7208 1.38629 1.38629 1.38629 1.38629
7209 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7210 21 2.93114 3.56396 0.11980 3.46618 21 - -
7211 1.38629 1.38629 1.38629 1.38629
7212 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7213 22 2.93114 3.56396 0.11980 3.46618 22 - -
7214 1.38629 1.38629 1.38629 1.38629
7215 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7216 23 2.93114 3.56396 0.11980 3.46618 23 - -
7217 1.38629 1.38629 1.38629 1.38629
7218 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7219 24 3.40613 0.13347 3.45673 2.80932 24 - -
7220 1.38629 1.38629 1.38629 1.38629
7221 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7222 25 0.14502 3.35687 2.78670 3.25633 25 - -
7223 1.38629 1.38629 1.38629 1.38629
7224 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7225 26 3.40613 0.13347 3.45673 2.80932 26 - -
7226 1.38629 1.38629 1.38629 1.38629
7227 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7228 27 2.93114 3.56396 0.11980 3.46618 27 - -
7229 1.38629 1.38629 1.38629 1.38629
7230 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7231 28 3.06506 2.58015 3.11411 0.18252 28 - -
7232 1.38629 1.38629 1.38629 1.38629
7233 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7234 29 3.40613 0.13347 3.45673 2.80932 29 - -
7235 1.38629 1.38629 1.38629 1.38629
7236 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7237 30 3.06506 2.58015 3.11411 0.18252 30 - -
7238 1.38629 1.38629 1.38629 1.38629
7239 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7240 31 2.93114 3.56396 0.11980 3.46618 31 - -
7241 1.38629 1.38629 1.38629 1.38629
7242 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7243 32 3.40613 0.13347 3.45673 2.80932 32 - -
7244 1.38629 1.38629 1.38629 1.38629
7245 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7246 33 3.40613 0.13347 3.45673 2.80932 33 - -
7247 1.38629 1.38629 1.38629 1.38629
7248 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7249 34 3.06506 2.58015 3.11411 0.18252 34 - -
7250 1.38629 1.38629 1.38629 1.38629
7251 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7252 35 2.93114 3.56396 0.11980 3.46618 35 - -
7253 1.38629 1.38629 1.38629 1.38629
7254 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7255 36 2.93114 3.56396 0.11980 3.46618 36 - -
7256 1.38629 1.38629 1.38629 1.38629
7257 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7258 37 2.93114 3.56396 0.11980 3.46618 37 - -
7259 1.38629 1.38629 1.38629 1.38629
7260 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7261 38 3.06506 2.58015 3.11411 0.18252 38 - -
7262 1.38629 1.38629 1.38629 1.38629
7263 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7264 39 2.93114 3.56396 0.11980 3.46618 39 - -
7265 1.38629 1.38629 1.38629 1.38629
7266 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7267 40 3.06506 2.58015 3.11411 0.18252 40 - -
7268 1.38629 1.38629 1.38629 1.38629
7269 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7270 41 3.40613 0.13347 3.45673 2.80932 41 - -
7271 1.38629 1.38629 1.38629 1.38629
7272 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7273 42 0.14502 3.35687 2.78670 3.25633 42 - -
7274 1.38629 1.38629 1.38629 1.38629
7275 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7276 43 3.40613 0.13347 3.45673 2.80932 43 - -
7277 1.38629 1.38629 1.38629 1.38629
7278 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7279 44 2.93114 3.56396 0.11980 3.46618 44 - -
7280 1.38629 1.38629 1.38629 1.38629
7281 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
7282 45 3.40613 0.13347 3.45673 2.80932 45 - -
7283 1.38629 1.38629 1.38629 1.38629
7284 0.01887 3.97977 * 1.46634 0.26236 0.00000 *
7285 //
7286 HMMER3/b [3.0 | March 2010]
7287 NAME 3_End_Tracheophyta_58S_end_thirty_long
7288 LENG 45
7289 ALPH DNA
7290 RF no
7291 CS no
7292 MAP yes
7293 DATE Sat Feb 18 01:08:56 2012
7294 NSEQ 33
7295 EFFN 3.452271
7296 CKSUM 3012843748
7297 STATS LOCAL MSV -7.5469 0.71933
7298 STATS LOCAL VITERBI -7.9147 0.71933
7299 STATS LOCAL FORWARD -3.6482 0.71933
7300 HMM A C G T
7301 m->m m->i m->d i->m i->i d->m d->d
7302 COMPO 1.70070 1.09199 1.06893 1.97677
7303 1.38629 1.38629 1.38629 1.38629
7304 0.03603 4.03464 4.03464 1.46634 0.26236 0.00000 *
7305 1 3.47984 0.12477 3.52729 2.86289 1 - -
7306 1.38629 1.38629 1.38629 1.38629
7307 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7308 2 2.97564 3.62879 0.11277 3.53776 2 - -
7309 1.38629 1.38629 1.38629 1.38629
7310 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7311 3 3.47984 0.12477 3.52729 2.86289 3 - -
7312 1.38629 1.38629 1.38629 1.38629
7313 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7314 4 3.47984 0.12477 3.52729 2.86289 4 - -
7315 1.38629 1.38629 1.38629 1.38629
7316 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7317 5 3.47984 0.12477 3.52729 2.86289 5 - -
7318 1.38629 1.38629 1.38629 1.38629
7319 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7320 6 2.97564 3.62879 0.11277 3.53776 6 - -
7321 1.38629 1.38629 1.38629 1.38629
7322 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7323 7 0.13665 3.42087 2.82823 3.32641 7 - -
7324 1.38629 1.38629 1.38629 1.38629
7325 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7326 8 2.97564 3.62879 0.11277 3.53776 8 - -
7327 1.38629 1.38629 1.38629 1.38629
7328 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7329 9 2.97564 3.62879 0.11277 3.53776 9 - -
7330 1.38629 1.38629 1.38629 1.38629
7331 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7332 10 2.97564 3.62879 0.11277 3.53776 10 - -
7333 1.38629 1.38629 1.38629 1.38629
7334 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7335 11 0.13665 3.42087 2.82823 3.32641 11 - -
7336 1.38629 1.38629 1.38629 1.38629
7337 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7338 12 2.42773 0.91647 2.49970 0.84461 12 - -
7339 1.38629 1.38629 1.38629 1.38629
7340 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7341 13 3.47984 0.12477 3.52729 2.86289 13 - -
7342 1.38629 1.38629 1.38629 1.38629
7343 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7344 14 1.95486 0.41962 2.53145 2.10723 14 - -
7345 1.38629 1.38629 1.38629 1.38629
7346 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7347 15 2.11863 2.15518 1.09102 0.84852 15 - -
7348 1.38629 1.38629 1.38629 1.38629
7349 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7350 16 3.47984 0.12477 3.52729 2.86289 16 - -
7351 1.38629 1.38629 1.38629 1.38629
7352 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7353 17 3.47984 0.12477 3.52729 2.86289 17 - -
7354 1.38629 1.38629 1.38629 1.38629
7355 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7356 18 3.47984 0.12477 3.52729 2.86289 18 - -
7357 1.38629 1.38629 1.38629 1.38629
7358 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7359 19 2.52351 3.40230 0.16305 3.29746 19 - -
7360 1.38629 1.38629 1.38629 1.38629
7361 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7362 20 0.13665 3.42087 2.82823 3.32641 20 - -
7363 1.38629 1.38629 1.38629 1.38629
7364 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7365 21 2.97564 3.62879 0.11277 3.53776 21 - -
7366 1.38629 1.38629 1.38629 1.38629
7367 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7368 22 2.97564 3.62879 0.11277 3.53776 22 - -
7369 1.38629 1.38629 1.38629 1.38629
7370 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7371 23 2.97564 3.62879 0.11277 3.53776 23 - -
7372 1.38629 1.38629 1.38629 1.38629
7373 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7374 24 3.47984 0.12477 3.52729 2.86289 24 - -
7375 1.38629 1.38629 1.38629 1.38629
7376 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7377 25 0.13665 3.42087 2.82823 3.32641 25 - -
7378 1.38629 1.38629 1.38629 1.38629
7379 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7380 26 3.47984 0.12477 3.52729 2.86289 26 - -
7381 1.38629 1.38629 1.38629 1.38629
7382 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7383 27 2.97564 3.62879 0.11277 3.53776 27 - -
7384 1.38629 1.38629 1.38629 1.38629
7385 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7386 28 3.47984 0.12477 3.52729 2.86289 28 - -
7387 1.38629 1.38629 1.38629 1.38629
7388 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7389 29 3.47984 0.12477 3.52729 2.86289 29 - -
7390 1.38629 1.38629 1.38629 1.38629
7391 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7392 30 3.12979 2.62130 3.17636 0.17218 30 - -
7393 1.38629 1.38629 1.38629 1.38629
7394 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7395 31 2.97564 3.62879 0.11277 3.53776 31 - -
7396 1.38629 1.38629 1.38629 1.38629
7397 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7398 32 3.47984 0.12477 3.52729 2.86289 32 - -
7399 1.38629 1.38629 1.38629 1.38629
7400 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7401 33 3.47984 0.12477 3.52729 2.86289 33 - -
7402 1.38629 1.38629 1.38629 1.38629
7403 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7404 34 3.12979 2.62130 3.17636 0.17218 34 - -
7405 1.38629 1.38629 1.38629 1.38629
7406 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7407 35 2.97564 3.62879 0.11277 3.53776 35 - -
7408 1.38629 1.38629 1.38629 1.38629
7409 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7410 36 2.97564 3.62879 0.11277 3.53776 36 - -
7411 1.38629 1.38629 1.38629 1.38629
7412 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7413 37 2.97564 3.62879 0.11277 3.53776 37 - -
7414 1.38629 1.38629 1.38629 1.38629
7415 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7416 38 3.47984 0.12477 3.52729 2.86289 38 - -
7417 1.38629 1.38629 1.38629 1.38629
7418 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7419 39 2.97564 3.62879 0.11277 3.53776 39 - -
7420 1.38629 1.38629 1.38629 1.38629
7421 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7422 40 3.12979 2.62130 3.17636 0.17218 40 - -
7423 1.38629 1.38629 1.38629 1.38629
7424 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7425 41 2.37199 2.46336 2.81060 0.27261 41 - -
7426 1.38629 1.38629 1.38629 1.38629
7427 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7428 42 0.13665 3.42087 2.82823 3.32641 42 - -
7429 1.38629 1.38629 1.38629 1.38629
7430 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7431 43 2.97564 3.62879 0.11277 3.53776 43 - -
7432 1.38629 1.38629 1.38629 1.38629
7433 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7434 44 0.13665 3.42087 2.82823 3.32641 44 - -
7435 1.38629 1.38629 1.38629 1.38629
7436 0.03603 4.03464 4.03464 1.46634 0.26236 1.09861 0.40547
7437 45 0.13665 3.42087 2.82823 3.32641 45 - -
7438 1.38629 1.38629 1.38629 1.38629
7439 0.01817 4.01679 * 1.46634 0.26236 0.00000 *
7440 //
7441 HMMER3/b [3.0 | March 2010]
7442 NAME 3_End_Tracheophyta_58S_end_thirtyfive_long
7443 LENG 45
7444 ALPH DNA
7445 RF no
7446 CS no
7447 MAP yes
7448 DATE Sat Feb 18 01:11:30 2012
7449 NSEQ 3
7450 EFFN 3.000000
7451 CKSUM 526989836
7452 STATS LOCAL MSV -7.9616 0.72013
7453 STATS LOCAL VITERBI -7.8039 0.72013
7454 STATS LOCAL FORWARD -4.0636 0.72013
7455 HMM A C G T
7456 m->m m->i m->d i->m i->i d->m d->d
7457 COMPO 1.63091 1.26577 1.25759 1.43595
7458 1.38629 1.38629 1.38629 1.38629
7459 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
7460 1 2.86982 3.47591 0.13017 3.36931 1 - -
7461 1.38629 1.38629 1.38629 1.38629
7462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7463 2 2.97980 2.52563 3.03204 0.19727 2 - -
7464 1.38629 1.38629 1.38629 1.38629
7465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7466 3 3.30705 0.14631 3.36166 2.73626 3 - -
7467 1.38629 1.38629 1.38629 1.38629
7468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7469 4 3.30705 0.14631 3.36166 2.73626 4 - -
7470 1.38629 1.38629 1.38629 1.38629
7471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7472 5 2.86982 3.47591 0.13017 3.36931 5 - -
7473 1.38629 1.38629 1.38629 1.38629
7474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7475 6 0.15719 3.27118 2.73043 3.16274 6 - -
7476 1.38629 1.38629 1.38629 1.38629
7477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7478 7 0.15719 3.27118 2.73043 3.16274 7 - -
7479 1.38629 1.38629 1.38629 1.38629
7480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7481 8 0.15719 3.27118 2.73043 3.16274 8 - -
7482 1.38629 1.38629 1.38629 1.38629
7483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7484 9 3.30705 0.14631 3.36166 2.73626 9 - -
7485 1.38629 1.38629 1.38629 1.38629
7486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7487 10 3.30705 0.14631 3.36166 2.73626 10 - -
7488 1.38629 1.38629 1.38629 1.38629
7489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7490 11 2.97980 2.52563 3.03204 0.19727 11 - -
7491 1.38629 1.38629 1.38629 1.38629
7492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7493 12 2.97980 2.52563 3.03204 0.19727 12 - -
7494 1.38629 1.38629 1.38629 1.38629
7495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7496 13 2.97980 2.52563 3.03204 0.19727 13 - -
7497 1.38629 1.38629 1.38629 1.38629
7498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7499 14 2.97980 2.52563 3.03204 0.19727 14 - -
7500 1.38629 1.38629 1.38629 1.38629
7501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7502 15 2.86982 3.47591 0.13017 3.36931 15 - -
7503 1.38629 1.38629 1.38629 1.38629
7504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7505 16 2.86982 3.47591 0.13017 3.36931 16 - -
7506 1.38629 1.38629 1.38629 1.38629
7507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7508 17 2.97980 2.52563 3.03204 0.19727 17 - -
7509 1.38629 1.38629 1.38629 1.38629
7510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7511 18 3.30705 0.14631 3.36166 2.73626 18 - -
7512 1.38629 1.38629 1.38629 1.38629
7513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7514 19 2.86982 3.47591 0.13017 3.36931 19 - -
7515 1.38629 1.38629 1.38629 1.38629
7516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7517 20 0.15719 3.27118 2.73043 3.16274 20 - -
7518 1.38629 1.38629 1.38629 1.38629
7519 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7520 21 2.86982 3.47591 0.13017 3.36931 21 - -
7521 1.38629 1.38629 1.38629 1.38629
7522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7523 22 2.86982 3.47591 0.13017 3.36931 22 - -
7524 1.38629 1.38629 1.38629 1.38629
7525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7526 23 0.15719 3.27118 2.73043 3.16274 23 - -
7527 1.38629 1.38629 1.38629 1.38629
7528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7529 24 3.30705 0.14631 3.36166 2.73626 24 - -
7530 1.38629 1.38629 1.38629 1.38629
7531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7532 25 0.15719 3.27118 2.73043 3.16274 25 - -
7533 1.38629 1.38629 1.38629 1.38629
7534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7535 26 3.30705 0.14631 3.36166 2.73626 26 - -
7536 1.38629 1.38629 1.38629 1.38629
7537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7538 27 2.86982 3.47591 0.13017 3.36931 27 - -
7539 1.38629 1.38629 1.38629 1.38629
7540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7541 28 2.97980 2.52563 3.03204 0.19727 28 - -
7542 1.38629 1.38629 1.38629 1.38629
7543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7544 29 3.30705 0.14631 3.36166 2.73626 29 - -
7545 1.38629 1.38629 1.38629 1.38629
7546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7547 30 2.97980 2.52563 3.03204 0.19727 30 - -
7548 1.38629 1.38629 1.38629 1.38629
7549 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7550 31 2.86982 3.47591 0.13017 3.36931 31 - -
7551 1.38629 1.38629 1.38629 1.38629
7552 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7553 32 3.30705 0.14631 3.36166 2.73626 32 - -
7554 1.38629 1.38629 1.38629 1.38629
7555 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7556 33 3.30705 0.14631 3.36166 2.73626 33 - -
7557 1.38629 1.38629 1.38629 1.38629
7558 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7559 34 2.97980 2.52563 3.03204 0.19727 34 - -
7560 1.38629 1.38629 1.38629 1.38629
7561 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7562 35 2.86982 3.47591 0.13017 3.36931 35 - -
7563 1.38629 1.38629 1.38629 1.38629
7564 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7565 36 2.86982 3.47591 0.13017 3.36931 36 - -
7566 1.38629 1.38629 1.38629 1.38629
7567 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7568 37 2.86982 3.47591 0.13017 3.36931 37 - -
7569 1.38629 1.38629 1.38629 1.38629
7570 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7571 38 3.30705 0.14631 3.36166 2.73626 38 - -
7572 1.38629 1.38629 1.38629 1.38629
7573 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7574 39 2.86982 3.47591 0.13017 3.36931 39 - -
7575 1.38629 1.38629 1.38629 1.38629
7576 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7577 40 2.97980 2.52563 3.03204 0.19727 40 - -
7578 1.38629 1.38629 1.38629 1.38629
7579 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7580 41 3.30705 0.14631 3.36166 2.73626 41 - -
7581 1.38629 1.38629 1.38629 1.38629
7582 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7583 42 0.15719 3.27118 2.73043 3.16274 42 - -
7584 1.38629 1.38629 1.38629 1.38629
7585 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7586 43 3.30705 0.14631 3.36166 2.73626 43 - -
7587 1.38629 1.38629 1.38629 1.38629
7588 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7589 44 0.15719 3.27118 2.73043 3.16274 44 - -
7590 1.38629 1.38629 1.38629 1.38629
7591 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
7592 45 2.97980 2.52563 3.03204 0.19727 45 - -
7593 1.38629 1.38629 1.38629 1.38629
7594 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
7595 //
7596 HMMER3/b [3.0 | March 2010]
7597 NAME 3_End_Tracheophyta_58S_end_thirtyfoura_long
7598 LENG 45
7599 ALPH DNA
7600 RF no
7601 CS no
7602 MAP yes
7603 DATE Sat Feb 18 01:11:05 2012
7604 NSEQ 31
7605 EFFN 3.576050
7606 CKSUM 1110488480
7607 STATS LOCAL MSV -7.3906 0.71932
7608 STATS LOCAL VITERBI -7.7243 0.71932
7609 STATS LOCAL FORWARD -4.1047 0.71932
7610 HMM A C G T
7611 m->m m->i m->d i->m i->i d->m d->d
7612 COMPO 1.73194 1.44969 1.07683 1.39536
7613 1.38629 1.38629 1.38629 1.38629
7614 0.03524 4.05630 4.05630 1.46634 0.26236 0.00000 *
7615 1 3.00104 3.66608 0.10894 3.57903 1 - -
7616 1.38629 1.38629 1.38629 1.38629
7617 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7618 2 3.52251 0.12003 3.56809 2.89364 2 - -
7619 1.38629 1.38629 1.38629 1.38629
7620 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7621 3 0.41720 2.55354 2.39138 1.76141 3 - -
7622 1.38629 1.38629 1.38629 1.38629
7623 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7624 4 3.52251 0.12003 3.56809 2.89364 4 - -
7625 1.38629 1.38629 1.38629 1.38629
7626 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7627 5 3.00104 3.66608 0.10894 3.57903 5 - -
7628 1.38629 1.38629 1.38629 1.38629
7629 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7630 6 0.13204 3.45806 2.85223 3.36719 6 - -
7631 1.38629 1.38629 1.38629 1.38629
7632 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7633 7 3.00104 3.66608 0.10894 3.57903 7 - -
7634 1.38629 1.38629 1.38629 1.38629
7635 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7636 8 3.00104 3.66608 0.10894 3.57903 8 - -
7637 1.38629 1.38629 1.38629 1.38629
7638 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7639 9 3.52251 0.12003 3.56809 2.89364 9 - -
7640 1.38629 1.38629 1.38629 1.38629
7641 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7642 10 3.52251 0.12003 3.56809 2.89364 10 - -
7643 1.38629 1.38629 1.38629 1.38629
7644 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7645 11 0.13204 3.45806 2.85223 3.36719 11 - -
7646 1.38629 1.38629 1.38629 1.38629
7647 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7648 12 3.16784 2.64544 3.21293 0.16642 12 - -
7649 1.38629 1.38629 1.38629 1.38629
7650 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7651 13 3.16784 2.64544 3.21293 0.16642 13 - -
7652 1.38629 1.38629 1.38629 1.38629
7653 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7654 14 0.13204 3.45806 2.85223 3.36719 14 - -
7655 1.38629 1.38629 1.38629 1.38629
7656 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7657 15 3.00104 3.66608 0.10894 3.57903 15 - -
7658 1.38629 1.38629 1.38629 1.38629
7659 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7660 16 3.00104 3.66608 0.10894 3.57903 16 - -
7661 1.38629 1.38629 1.38629 1.38629
7662 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7663 17 3.04861 2.35479 3.09836 0.20759 17 - -
7664 1.38629 1.38629 1.38629 1.38629
7665 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7666 18 3.52251 0.12003 3.56809 2.89364 18 - -
7667 1.38629 1.38629 1.38629 1.38629
7668 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7669 19 2.53822 3.43935 0.15855 3.33746 19 - -
7670 1.38629 1.38629 1.38629 1.38629
7671 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7672 20 0.13204 3.45806 2.85223 3.36719 20 - -
7673 1.38629 1.38629 1.38629 1.38629
7674 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7675 21 3.00104 3.66608 0.10894 3.57903 21 - -
7676 1.38629 1.38629 1.38629 1.38629
7677 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7678 22 1.82346 2.21809 2.09443 0.49992 22 - -
7679 1.38629 1.38629 1.38629 1.38629
7680 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7681 23 3.00104 3.66608 0.10894 3.57903 23 - -
7682 1.38629 1.38629 1.38629 1.38629
7683 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7684 24 3.52251 0.12003 3.56809 2.89364 24 - -
7685 1.38629 1.38629 1.38629 1.38629
7686 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7687 25 0.13204 3.45806 2.85223 3.36719 25 - -
7688 1.38629 1.38629 1.38629 1.38629
7689 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7690 26 3.28078 0.17413 3.33457 2.44665 26 - -
7691 1.38629 1.38629 1.38629 1.38629
7692 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7693 27 3.00104 3.66608 0.10894 3.57903 27 - -
7694 1.38629 1.38629 1.38629 1.38629
7695 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7696 28 3.16784 2.64544 3.21293 0.16642 28 - -
7697 1.38629 1.38629 1.38629 1.38629
7698 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7699 29 3.52251 0.12003 3.56809 2.89364 29 - -
7700 1.38629 1.38629 1.38629 1.38629
7701 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7702 30 3.16784 2.64544 3.21293 0.16642 30 - -
7703 1.38629 1.38629 1.38629 1.38629
7704 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7705 31 3.00104 3.66608 0.10894 3.57903 31 - -
7706 1.38629 1.38629 1.38629 1.38629
7707 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7708 32 3.04861 2.35479 3.09836 0.20759 32 - -
7709 1.38629 1.38629 1.38629 1.38629
7710 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7711 33 3.16784 2.64544 3.21293 0.16642 33 - -
7712 1.38629 1.38629 1.38629 1.38629
7713 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7714 34 3.16784 2.64544 3.21293 0.16642 34 - -
7715 1.38629 1.38629 1.38629 1.38629
7716 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7717 35 3.00104 3.66608 0.10894 3.57903 35 - -
7718 1.38629 1.38629 1.38629 1.38629
7719 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7720 36 3.00104 3.66608 0.10894 3.57903 36 - -
7721 1.38629 1.38629 1.38629 1.38629
7722 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7723 37 3.00104 3.66608 0.10894 3.57903 37 - -
7724 1.38629 1.38629 1.38629 1.38629
7725 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7726 38 3.28078 0.17413 3.33457 2.44665 38 - -
7727 1.38629 1.38629 1.38629 1.38629
7728 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7729 39 3.00104 3.66608 0.10894 3.57903 39 - -
7730 1.38629 1.38629 1.38629 1.38629
7731 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7732 40 3.16784 2.64544 3.21293 0.16642 40 - -
7733 1.38629 1.38629 1.38629 1.38629
7734 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7735 41 3.52251 0.12003 3.56809 2.89364 41 - -
7736 1.38629 1.38629 1.38629 1.38629
7737 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7738 42 0.13204 3.45806 2.85223 3.36719 42 - -
7739 1.38629 1.38629 1.38629 1.38629
7740 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7741 43 3.16784 2.64544 3.21293 0.16642 43 - -
7742 1.38629 1.38629 1.38629 1.38629
7743 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7744 44 3.00104 3.66608 0.10894 3.57903 44 - -
7745 1.38629 1.38629 1.38629 1.38629
7746 0.03524 4.05630 4.05630 1.46634 0.26236 1.09861 0.40547
7747 45 2.75448 1.75873 2.81555 0.35066 45 - -
7748 1.38629 1.38629 1.38629 1.38629
7749 0.01777 4.03884 * 1.46634 0.26236 0.00000 *
7750 //
7751 HMMER3/b [3.0 | March 2010]
7752 NAME 3_End_Tracheophyta_58S_end_thirtyfourb_long
7753 LENG 45
7754 ALPH DNA
7755 RF no
7756 CS no
7757 MAP yes
7758 DATE Sat Feb 18 01:11:12 2012
7759 NSEQ 2
7760 EFFN 2.000000
7761 CKSUM 3980991935
7762 STATS LOCAL MSV -7.5533 0.72716
7763 STATS LOCAL VITERBI -8.1522 0.72716
7764 STATS LOCAL FORWARD -3.3295 0.72716
7765 HMM A C G T
7766 m->m m->i m->d i->m i->i d->m d->d
7767 COMPO 1.59501 1.20164 1.16801 1.68520
7768 1.38629 1.38629 1.38629 1.38629
7769 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7770 1 2.53331 3.02441 0.20344 2.88069 1 - -
7771 1.38629 1.38629 1.38629 1.38629
7772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7773 2 2.81865 0.23582 2.88868 2.35662 2 - -
7774 1.38629 1.38629 1.38629 1.38629
7775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7776 3 2.57915 2.25909 2.64442 0.28946 3 - -
7777 1.38629 1.38629 1.38629 1.38629
7778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7779 4 2.81865 0.23582 2.88868 2.35662 4 - -
7780 1.38629 1.38629 1.38629 1.38629
7781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7782 5 2.53331 3.02441 0.20344 2.88069 5 - -
7783 1.38629 1.38629 1.38629 1.38629
7784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7785 6 0.23862 2.84929 2.43386 2.70756 6 - -
7786 1.38629 1.38629 1.38629 1.38629
7787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7788 7 2.53331 3.02441 0.20344 2.88069 7 - -
7789 1.38629 1.38629 1.38629 1.38629
7790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7791 8 2.53331 3.02441 0.20344 2.88069 8 - -
7792 1.38629 1.38629 1.38629 1.38629
7793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7794 9 2.81865 0.23582 2.88868 2.35662 9 - -
7795 1.38629 1.38629 1.38629 1.38629
7796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7797 10 2.81865 0.23582 2.88868 2.35662 10 - -
7798 1.38629 1.38629 1.38629 1.38629
7799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7800 11 0.23862 2.84929 2.43386 2.70756 11 - -
7801 1.38629 1.38629 1.38629 1.38629
7802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7803 12 2.81865 0.23582 2.88868 2.35662 12 - -
7804 1.38629 1.38629 1.38629 1.38629
7805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7806 13 2.57915 2.25909 2.64442 0.28946 13 - -
7807 1.38629 1.38629 1.38629 1.38629
7808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7809 14 0.23862 2.84929 2.43386 2.70756 14 - -
7810 1.38629 1.38629 1.38629 1.38629
7811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7812 15 0.23862 2.84929 2.43386 2.70756 15 - -
7813 1.38629 1.38629 1.38629 1.38629
7814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7815 16 2.53331 3.02441 0.20344 2.88069 16 - -
7816 1.38629 1.38629 1.38629 1.38629
7817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7818 17 2.57915 2.25909 2.64442 0.28946 17 - -
7819 1.38629 1.38629 1.38629 1.38629
7820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7821 18 2.81865 0.23582 2.88868 2.35662 18 - -
7822 1.38629 1.38629 1.38629 1.38629
7823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7824 19 2.53331 3.02441 0.20344 2.88069 19 - -
7825 1.38629 1.38629 1.38629 1.38629
7826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7827 20 0.23862 2.84929 2.43386 2.70756 20 - -
7828 1.38629 1.38629 1.38629 1.38629
7829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7830 21 2.53331 3.02441 0.20344 2.88069 21 - -
7831 1.38629 1.38629 1.38629 1.38629
7832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7833 22 2.53331 3.02441 0.20344 2.88069 22 - -
7834 1.38629 1.38629 1.38629 1.38629
7835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7836 23 2.53331 3.02441 0.20344 2.88069 23 - -
7837 1.38629 1.38629 1.38629 1.38629
7838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7839 24 2.81865 0.23582 2.88868 2.35662 24 - -
7840 1.38629 1.38629 1.38629 1.38629
7841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7842 25 0.23862 2.84929 2.43386 2.70756 25 - -
7843 1.38629 1.38629 1.38629 1.38629
7844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7845 26 2.81865 0.23582 2.88868 2.35662 26 - -
7846 1.38629 1.38629 1.38629 1.38629
7847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7848 27 2.53331 3.02441 0.20344 2.88069 27 - -
7849 1.38629 1.38629 1.38629 1.38629
7850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7851 28 2.57915 2.25909 2.64442 0.28946 28 - -
7852 1.38629 1.38629 1.38629 1.38629
7853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7854 29 2.81865 0.23582 2.88868 2.35662 29 - -
7855 1.38629 1.38629 1.38629 1.38629
7856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7857 30 2.57915 2.25909 2.64442 0.28946 30 - -
7858 1.38629 1.38629 1.38629 1.38629
7859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7860 31 2.53331 3.02441 0.20344 2.88069 31 - -
7861 1.38629 1.38629 1.38629 1.38629
7862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7863 32 2.81865 0.23582 2.88868 2.35662 32 - -
7864 1.38629 1.38629 1.38629 1.38629
7865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7866 33 2.81865 0.23582 2.88868 2.35662 33 - -
7867 1.38629 1.38629 1.38629 1.38629
7868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7869 34 2.57915 2.25909 2.64442 0.28946 34 - -
7870 1.38629 1.38629 1.38629 1.38629
7871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7872 35 2.53331 3.02441 0.20344 2.88069 35 - -
7873 1.38629 1.38629 1.38629 1.38629
7874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7875 36 2.53331 3.02441 0.20344 2.88069 36 - -
7876 1.38629 1.38629 1.38629 1.38629
7877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7878 37 2.53331 3.02441 0.20344 2.88069 37 - -
7879 1.38629 1.38629 1.38629 1.38629
7880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7881 38 2.81865 0.23582 2.88868 2.35662 38 - -
7882 1.38629 1.38629 1.38629 1.38629
7883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7884 39 2.53331 3.02441 0.20344 2.88069 39 - -
7885 1.38629 1.38629 1.38629 1.38629
7886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7887 40 2.57915 2.25909 2.64442 0.28946 40 - -
7888 1.38629 1.38629 1.38629 1.38629
7889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7890 41 2.81865 0.23582 2.88868 2.35662 41 - -
7891 1.38629 1.38629 1.38629 1.38629
7892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7893 42 0.23862 2.84929 2.43386 2.70756 42 - -
7894 1.38629 1.38629 1.38629 1.38629
7895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7896 43 2.81865 0.23582 2.88868 2.35662 43 - -
7897 1.38629 1.38629 1.38629 1.38629
7898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7899 44 0.23862 2.84929 2.43386 2.70756 44 - -
7900 1.38629 1.38629 1.38629 1.38629
7901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7902 45 2.81865 0.23582 2.88868 2.35662 45 - -
7903 1.38629 1.38629 1.38629 1.38629
7904 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7905 //
7906 HMMER3/b [3.0 | March 2010]
7907 NAME 3_End_Tracheophyta_58S_end_thirtyfourc_long
7908 LENG 45
7909 ALPH DNA
7910 RF no
7911 CS no
7912 MAP yes
7913 DATE Sat Feb 18 01:11:18 2012
7914 NSEQ 2
7915 EFFN 2.000000
7916 CKSUM 2098883129
7917 STATS LOCAL MSV -7.5674 0.72732
7918 STATS LOCAL VITERBI -8.2900 0.72732
7919 STATS LOCAL FORWARD -3.4224 0.72732
7920 HMM A C G T
7921 m->m m->i m->d i->m i->i d->m d->d
7922 COMPO 1.58991 1.35237 1.11830 1.55782
7923 1.38629 1.38629 1.38629 1.38629
7924 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7925 1 2.53331 3.02441 0.20344 2.88069 1 - -
7926 1.38629 1.38629 1.38629 1.38629
7927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7928 2 2.81865 0.23582 2.88868 2.35662 2 - -
7929 1.38629 1.38629 1.38629 1.38629
7930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7931 3 2.81865 0.23582 2.88868 2.35662 3 - -
7932 1.38629 1.38629 1.38629 1.38629
7933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7934 4 2.81865 0.23582 2.88868 2.35662 4 - -
7935 1.38629 1.38629 1.38629 1.38629
7936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7937 5 2.53331 3.02441 0.20344 2.88069 5 - -
7938 1.38629 1.38629 1.38629 1.38629
7939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7940 6 0.23862 2.84929 2.43386 2.70756 6 - -
7941 1.38629 1.38629 1.38629 1.38629
7942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7943 7 2.53331 3.02441 0.20344 2.88069 7 - -
7944 1.38629 1.38629 1.38629 1.38629
7945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7946 8 2.53331 3.02441 0.20344 2.88069 8 - -
7947 1.38629 1.38629 1.38629 1.38629
7948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7949 9 2.81865 0.23582 2.88868 2.35662 9 - -
7950 1.38629 1.38629 1.38629 1.38629
7951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7952 10 2.81865 0.23582 2.88868 2.35662 10 - -
7953 1.38629 1.38629 1.38629 1.38629
7954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7955 11 0.23862 2.84929 2.43386 2.70756 11 - -
7956 1.38629 1.38629 1.38629 1.38629
7957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7958 12 0.23862 2.84929 2.43386 2.70756 12 - -
7959 1.38629 1.38629 1.38629 1.38629
7960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7961 13 2.57915 2.25909 2.64442 0.28946 13 - -
7962 1.38629 1.38629 1.38629 1.38629
7963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7964 14 2.81865 0.23582 2.88868 2.35662 14 - -
7965 1.38629 1.38629 1.38629 1.38629
7966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7967 15 2.53331 3.02441 0.20344 2.88069 15 - -
7968 1.38629 1.38629 1.38629 1.38629
7969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7970 16 2.53331 3.02441 0.20344 2.88069 16 - -
7971 1.38629 1.38629 1.38629 1.38629
7972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7973 17 2.57915 2.25909 2.64442 0.28946 17 - -
7974 1.38629 1.38629 1.38629 1.38629
7975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7976 18 2.57915 2.25909 2.64442 0.28946 18 - -
7977 1.38629 1.38629 1.38629 1.38629
7978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7979 19 2.53331 3.02441 0.20344 2.88069 19 - -
7980 1.38629 1.38629 1.38629 1.38629
7981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7982 20 0.23862 2.84929 2.43386 2.70756 20 - -
7983 1.38629 1.38629 1.38629 1.38629
7984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7985 21 2.53331 3.02441 0.20344 2.88069 21 - -
7986 1.38629 1.38629 1.38629 1.38629
7987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7988 22 2.53331 3.02441 0.20344 2.88069 22 - -
7989 1.38629 1.38629 1.38629 1.38629
7990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7991 23 2.53331 3.02441 0.20344 2.88069 23 - -
7992 1.38629 1.38629 1.38629 1.38629
7993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7994 24 2.81865 0.23582 2.88868 2.35662 24 - -
7995 1.38629 1.38629 1.38629 1.38629
7996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7997 25 0.23862 2.84929 2.43386 2.70756 25 - -
7998 1.38629 1.38629 1.38629 1.38629
7999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8000 26 2.57915 2.25909 2.64442 0.28946 26 - -
8001 1.38629 1.38629 1.38629 1.38629
8002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8003 27 2.53331 3.02441 0.20344 2.88069 27 - -
8004 1.38629 1.38629 1.38629 1.38629
8005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8006 28 2.57915 2.25909 2.64442 0.28946 28 - -
8007 1.38629 1.38629 1.38629 1.38629
8008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8009 29 2.81865 0.23582 2.88868 2.35662 29 - -
8010 1.38629 1.38629 1.38629 1.38629
8011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8012 30 2.57915 2.25909 2.64442 0.28946 30 - -
8013 1.38629 1.38629 1.38629 1.38629
8014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8015 31 2.53331 3.02441 0.20344 2.88069 31 - -
8016 1.38629 1.38629 1.38629 1.38629
8017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8018 32 2.57915 2.25909 2.64442 0.28946 32 - -
8019 1.38629 1.38629 1.38629 1.38629
8020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8021 33 2.81865 0.23582 2.88868 2.35662 33 - -
8022 1.38629 1.38629 1.38629 1.38629
8023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8024 34 2.57915 2.25909 2.64442 0.28946 34 - -
8025 1.38629 1.38629 1.38629 1.38629
8026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8027 35 2.53331 3.02441 0.20344 2.88069 35 - -
8028 1.38629 1.38629 1.38629 1.38629
8029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8030 36 2.53331 3.02441 0.20344 2.88069 36 - -
8031 1.38629 1.38629 1.38629 1.38629
8032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8033 37 2.53331 3.02441 0.20344 2.88069 37 - -
8034 1.38629 1.38629 1.38629 1.38629
8035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8036 38 2.81865 0.23582 2.88868 2.35662 38 - -
8037 1.38629 1.38629 1.38629 1.38629
8038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8039 39 0.23862 2.84929 2.43386 2.70756 39 - -
8040 1.38629 1.38629 1.38629 1.38629
8041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8042 40 2.57915 2.25909 2.64442 0.28946 40 - -
8043 1.38629 1.38629 1.38629 1.38629
8044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8045 41 2.81865 0.23582 2.88868 2.35662 41 - -
8046 1.38629 1.38629 1.38629 1.38629
8047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8048 42 0.23862 2.84929 2.43386 2.70756 42 - -
8049 1.38629 1.38629 1.38629 1.38629
8050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8051 43 0.23862 2.84929 2.43386 2.70756 43 - -
8052 1.38629 1.38629 1.38629 1.38629
8053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8054 44 2.53331 3.02441 0.20344 2.88069 44 - -
8055 1.38629 1.38629 1.38629 1.38629
8056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8057 45 2.81865 0.23582 2.88868 2.35662 45 - -
8058 1.38629 1.38629 1.38629 1.38629
8059 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8060 //
8061 HMMER3/b [3.0 | March 2010]
8062 NAME 3_End_Tracheophyta_58S_end_thirtyone_long
8063 LENG 45
8064 ALPH DNA
8065 RF no
8066 CS no
8067 MAP yes
8068 DATE Sat Feb 18 01:09:07 2012
8069 NSEQ 173
8070 EFFN 3.861984
8071 CKSUM 63343949
8072 STATS LOCAL MSV -7.1647 0.71933
8073 STATS LOCAL VITERBI -7.8521 0.71933
8074 STATS LOCAL FORWARD -3.4105 0.71933
8075 HMM A C G T
8076 m->m m->i m->d i->m i->i d->m d->d
8077 COMPO 1.98184 1.01410 1.02688 1.95663
8078 1.38629 1.38629 1.38629 1.38629
8079 0.03355 4.10462 4.10462 1.46634 0.26236 0.00000 *
8080 1 3.05490 3.74564 0.10125 3.66724 1 - -
8081 1.38629 1.38629 1.38629 1.38629
8082 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8083 2 3.61417 0.11054 3.65561 2.95909 2 - -
8084 1.38629 1.38629 1.38629 1.38629
8085 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8086 3 3.55107 0.12280 3.59487 2.82348 3 - -
8087 1.38629 1.38629 1.38629 1.38629
8088 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8089 4 3.51251 0.13063 3.55781 2.74676 4 - -
8090 1.38629 1.38629 1.38629 1.38629
8091 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8092 5 3.05490 3.74564 0.10125 3.66724 5 - -
8093 1.38629 1.38629 1.38629 1.38629
8094 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8095 6 0.12267 3.53838 2.90385 3.45540 6 - -
8096 1.38629 1.38629 1.38629 1.38629
8097 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8098 7 3.05490 3.74564 0.10125 3.66724 7 - -
8099 1.38629 1.38629 1.38629 1.38629
8100 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8101 8 2.65459 3.36410 0.16732 3.01286 8 - -
8102 1.38629 1.38629 1.38629 1.38629
8103 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8104 9 3.53248 0.12654 3.57701 2.78601 9 - -
8105 1.38629 1.38629 1.38629 1.38629
8106 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8107 10 3.55272 0.12247 3.59646 2.82687 10 - -
8108 1.38629 1.38629 1.38629 1.38629
8109 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8110 11 0.57727 2.28575 2.27808 1.45075 11 - -
8111 1.38629 1.38629 1.38629 1.38629
8112 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8113 12 2.53138 1.12398 2.60080 0.65152 12 - -
8114 1.38629 1.38629 1.38629 1.38629
8115 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8116 13 2.57887 1.26595 2.64667 0.55987 13 - -
8117 1.38629 1.38629 1.38629 1.38629
8118 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8119 14 2.41793 0.66381 2.38111 1.19218 14 - -
8120 1.38629 1.38629 1.38629 1.38629
8121 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8122 15 3.05490 3.74564 0.10125 3.66724 15 - -
8123 1.38629 1.38629 1.38629 1.38629
8124 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8125 16 3.05490 3.74564 0.10125 3.66724 16 - -
8126 1.38629 1.38629 1.38629 1.38629
8127 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8128 17 2.99017 0.28407 3.05277 1.89859 17 - -
8129 1.38629 1.38629 1.38629 1.38629
8130 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8131 18 2.95520 0.29957 3.01868 1.84559 18 - -
8132 1.38629 1.38629 1.38629 1.38629
8133 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8134 19 2.88765 3.67807 0.11477 3.59523 19 - -
8135 1.38629 1.38629 1.38629 1.38629
8136 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8137 20 0.12267 3.53838 2.90385 3.45540 20 - -
8138 1.38629 1.38629 1.38629 1.38629
8139 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8140 21 3.05490 3.74564 0.10125 3.66724 21 - -
8141 1.38629 1.38629 1.38629 1.38629
8142 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8143 22 3.05490 3.74564 0.10125 3.66724 22 - -
8144 1.38629 1.38629 1.38629 1.38629
8145 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8146 23 3.05490 3.74564 0.10125 3.66724 23 - -
8147 1.38629 1.38629 1.38629 1.38629
8148 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8149 24 3.61417 0.11054 3.65561 2.95909 24 - -
8150 1.38629 1.38629 1.38629 1.38629
8151 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8152 25 0.12267 3.53838 2.90385 3.45540 25 - -
8153 1.38629 1.38629 1.38629 1.38629
8154 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8155 26 3.55229 0.12255 3.59605 2.82599 26 - -
8156 1.38629 1.38629 1.38629 1.38629
8157 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8158 27 3.05490 3.74564 0.10125 3.66724 27 - -
8159 1.38629 1.38629 1.38629 1.38629
8160 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8161 28 3.09504 0.24308 3.15479 2.05671 28 - -
8162 1.38629 1.38629 1.38629 1.38629
8163 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8164 29 3.61417 0.11054 3.65561 2.95909 29 - -
8165 1.38629 1.38629 1.38629 1.38629
8166 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8167 30 3.20860 2.58338 3.25216 0.16797 30 - -
8168 1.38629 1.38629 1.38629 1.38629
8169 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8170 31 3.00222 3.63096 0.11692 3.37623 31 - -
8171 1.38629 1.38629 1.38629 1.38629
8172 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8173 32 3.61417 0.11054 3.65561 2.95909 32 - -
8174 1.38629 1.38629 1.38629 1.38629
8175 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8176 33 3.51186 0.13076 3.55719 2.74552 33 - -
8177 1.38629 1.38629 1.38629 1.38629
8178 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8179 34 3.25118 2.69828 3.29301 0.15454 34 - -
8180 1.38629 1.38629 1.38629 1.38629
8181 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8182 35 3.05490 3.74564 0.10125 3.66724 35 - -
8183 1.38629 1.38629 1.38629 1.38629
8184 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8185 36 3.05490 3.74564 0.10125 3.66724 36 - -
8186 1.38629 1.38629 1.38629 1.38629
8187 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8188 37 3.05490 3.74564 0.10125 3.66724 37 - -
8189 1.38629 1.38629 1.38629 1.38629
8190 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8191 38 3.54985 0.12304 3.59370 2.82100 38 - -
8192 1.38629 1.38629 1.38629 1.38629
8193 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8194 39 3.05490 3.74564 0.10125 3.66724 39 - -
8195 1.38629 1.38629 1.38629 1.38629
8196 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8197 40 3.25118 2.69828 3.29301 0.15454 40 - -
8198 1.38629 1.38629 1.38629 1.38629
8199 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8200 41 3.61417 0.11054 3.65561 2.95909 41 - -
8201 1.38629 1.38629 1.38629 1.38629
8202 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8203 42 0.12267 3.53838 2.90385 3.45540 42 - -
8204 1.38629 1.38629 1.38629 1.38629
8205 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8206 43 3.61417 0.11054 3.65561 2.95909 43 - -
8207 1.38629 1.38629 1.38629 1.38629
8208 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8209 44 3.05490 3.74564 0.10125 3.66724 44 - -
8210 1.38629 1.38629 1.38629 1.38629
8211 0.03355 4.10462 4.10462 1.46634 0.26236 1.09861 0.40547
8212 45 3.61417 0.11054 3.65561 2.95909 45 - -
8213 1.38629 1.38629 1.38629 1.38629
8214 0.01692 4.08799 * 1.46634 0.26236 0.00000 *
8215 //
8216 HMMER3/b [3.0 | March 2010]
8217 NAME 3_End_Tracheophyta_58S_end_thirtyseven_long
8218 LENG 45
8219 ALPH DNA
8220 RF no
8221 CS no
8222 MAP yes
8223 DATE Sat Feb 18 01:11:43 2012
8224 NSEQ 2
8225 EFFN 2.000000
8226 CKSUM 52418213
8227 STATS LOCAL MSV -7.4325 0.72761
8228 STATS LOCAL VITERBI -8.1937 0.72761
8229 STATS LOCAL FORWARD -3.7303 0.72761
8230 HMM A C G T
8231 m->m m->i m->d i->m i->i d->m d->d
8232 COMPO 1.66301 1.34714 1.16496 1.43333
8233 1.38629 1.38629 1.38629 1.38629
8234 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8235 1 2.53331 3.02441 0.20344 2.88069 1 - -
8236 1.38629 1.38629 1.38629 1.38629
8237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8238 2 2.57915 2.25909 2.64442 0.28946 2 - -
8239 1.38629 1.38629 1.38629 1.38629
8240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8241 3 2.53331 3.02441 0.20344 2.88069 3 - -
8242 1.38629 1.38629 1.38629 1.38629
8243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8244 4 2.53331 3.02441 0.20344 2.88069 4 - -
8245 1.38629 1.38629 1.38629 1.38629
8246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8247 5 2.81865 0.23582 2.88868 2.35662 5 - -
8248 1.38629 1.38629 1.38629 1.38629
8249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8250 6 2.81865 0.23582 2.88868 2.35662 6 - -
8251 1.38629 1.38629 1.38629 1.38629
8252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8253 7 2.53331 3.02441 0.20344 2.88069 7 - -
8254 1.38629 1.38629 1.38629 1.38629
8255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8256 8 0.23862 2.84929 2.43386 2.70756 8 - -
8257 1.38629 1.38629 1.38629 1.38629
8258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8259 9 2.53331 3.02441 0.20344 2.88069 9 - -
8260 1.38629 1.38629 1.38629 1.38629
8261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8262 10 2.53331 3.02441 0.20344 2.88069 10 - -
8263 1.38629 1.38629 1.38629 1.38629
8264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8265 11 2.81865 0.23582 2.88868 2.35662 11 - -
8266 1.38629 1.38629 1.38629 1.38629
8267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8268 12 2.81865 0.23582 2.88868 2.35662 12 - -
8269 1.38629 1.38629 1.38629 1.38629
8270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8271 13 2.57915 2.25909 2.64442 0.28946 13 - -
8272 1.38629 1.38629 1.38629 1.38629
8273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8274 14 2.81865 0.23582 2.88868 2.35662 14 - -
8275 1.38629 1.38629 1.38629 1.38629
8276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8277 15 2.53331 3.02441 0.20344 2.88069 15 - -
8278 1.38629 1.38629 1.38629 1.38629
8279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8280 16 2.53331 3.02441 0.20344 2.88069 16 - -
8281 1.38629 1.38629 1.38629 1.38629
8282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8283 17 2.81865 0.23582 2.88868 2.35662 17 - -
8284 1.38629 1.38629 1.38629 1.38629
8285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8286 18 2.57915 2.25909 2.64442 0.28946 18 - -
8287 1.38629 1.38629 1.38629 1.38629
8288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8289 19 2.53331 3.02441 0.20344 2.88069 19 - -
8290 1.38629 1.38629 1.38629 1.38629
8291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8292 20 0.23862 2.84929 2.43386 2.70756 20 - -
8293 1.38629 1.38629 1.38629 1.38629
8294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8295 21 2.53331 3.02441 0.20344 2.88069 21 - -
8296 1.38629 1.38629 1.38629 1.38629
8297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8298 22 2.53331 3.02441 0.20344 2.88069 22 - -
8299 1.38629 1.38629 1.38629 1.38629
8300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8301 23 2.53331 3.02441 0.20344 2.88069 23 - -
8302 1.38629 1.38629 1.38629 1.38629
8303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8304 24 2.81865 0.23582 2.88868 2.35662 24 - -
8305 1.38629 1.38629 1.38629 1.38629
8306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8307 25 0.23862 2.84929 2.43386 2.70756 25 - -
8308 1.38629 1.38629 1.38629 1.38629
8309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8310 26 2.81865 0.23582 2.88868 2.35662 26 - -
8311 1.38629 1.38629 1.38629 1.38629
8312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8313 27 0.23862 2.84929 2.43386 2.70756 27 - -
8314 1.38629 1.38629 1.38629 1.38629
8315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8316 28 2.57915 2.25909 2.64442 0.28946 28 - -
8317 1.38629 1.38629 1.38629 1.38629
8318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8319 29 2.81865 0.23582 2.88868 2.35662 29 - -
8320 1.38629 1.38629 1.38629 1.38629
8321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8322 30 2.57915 2.25909 2.64442 0.28946 30 - -
8323 1.38629 1.38629 1.38629 1.38629
8324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8325 31 0.23862 2.84929 2.43386 2.70756 31 - -
8326 1.38629 1.38629 1.38629 1.38629
8327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8328 32 2.81865 0.23582 2.88868 2.35662 32 - -
8329 1.38629 1.38629 1.38629 1.38629
8330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8331 33 2.57915 2.25909 2.64442 0.28946 33 - -
8332 1.38629 1.38629 1.38629 1.38629
8333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8334 34 2.57915 2.25909 2.64442 0.28946 34 - -
8335 1.38629 1.38629 1.38629 1.38629
8336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8337 35 2.57915 2.25909 2.64442 0.28946 35 - -
8338 1.38629 1.38629 1.38629 1.38629
8339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8340 36 2.53331 3.02441 0.20344 2.88069 36 - -
8341 1.38629 1.38629 1.38629 1.38629
8342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8343 37 2.53331 3.02441 0.20344 2.88069 37 - -
8344 1.38629 1.38629 1.38629 1.38629
8345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8346 38 2.81865 0.23582 2.88868 2.35662 38 - -
8347 1.38629 1.38629 1.38629 1.38629
8348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8349 39 0.23862 2.84929 2.43386 2.70756 39 - -
8350 1.38629 1.38629 1.38629 1.38629
8351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8352 40 2.57915 2.25909 2.64442 0.28946 40 - -
8353 1.38629 1.38629 1.38629 1.38629
8354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8355 41 2.57915 2.25909 2.64442 0.28946 41 - -
8356 1.38629 1.38629 1.38629 1.38629
8357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8358 42 2.53331 3.02441 0.20344 2.88069 42 - -
8359 1.38629 1.38629 1.38629 1.38629
8360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8361 43 2.81865 0.23582 2.88868 2.35662 43 - -
8362 1.38629 1.38629 1.38629 1.38629
8363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8364 44 0.23862 2.84929 2.43386 2.70756 44 - -
8365 1.38629 1.38629 1.38629 1.38629
8366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8367 45 2.57915 2.25909 2.64442 0.28946 45 - -
8368 1.38629 1.38629 1.38629 1.38629
8369 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8370 //
8371 HMMER3/b [3.0 | March 2010]
8372 NAME 3_End_Tracheophyta_58S_end_thirtythreea_long
8373 LENG 45
8374 ALPH DNA
8375 RF no
8376 CS no
8377 MAP yes
8378 DATE Sat Feb 18 01:09:29 2012
8379 NSEQ 18
8380 EFFN 3.783691
8381 CKSUM 550039999
8382 STATS LOCAL MSV -6.9143 0.71933
8383 STATS LOCAL VITERBI -7.6760 0.71933
8384 STATS LOCAL FORWARD -3.7559 0.71933
8385 HMM A C G T
8386 m->m m->i m->d i->m i->i d->m d->d
8387 COMPO 2.04129 1.19714 1.03285 1.55075
8388 1.38629 1.38629 1.38629 1.38629
8389 0.03400 4.09162 4.09162 1.46634 0.26236 0.00000 *
8390 1 3.04077 3.72472 0.10321 3.64403 1 - -
8391 1.38629 1.38629 1.38629 1.38629
8392 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8393 2 3.58999 0.11296 3.63254 2.94190 2 - -
8394 1.38629 1.38629 1.38629 1.38629
8395 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8396 3 3.58999 0.11296 3.63254 2.94190 3 - -
8397 1.38629 1.38629 1.38629 1.38629
8398 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8399 4 2.62908 1.41927 2.69499 0.48058 4 - -
8400 1.38629 1.38629 1.38629 1.38629
8401 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8402 5 3.04077 3.72472 0.10321 3.64403 5 - -
8403 1.38629 1.38629 1.38629 1.38629
8404 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8405 6 0.12508 3.51713 2.89021 3.43205 6 - -
8406 1.38629 1.38629 1.38629 1.38629
8407 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8408 7 3.04077 3.72472 0.10321 3.64403 7 - -
8409 1.38629 1.38629 1.38629 1.38629
8410 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8411 8 3.04077 3.72472 0.10321 3.64403 8 - -
8412 1.38629 1.38629 1.38629 1.38629
8413 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8414 9 3.58999 0.11296 3.63254 2.94190 9 - -
8415 1.38629 1.38629 1.38629 1.38629
8416 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8417 10 3.58999 0.11296 3.63254 2.94190 10 - -
8418 1.38629 1.38629 1.38629 1.38629
8419 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8420 11 3.22897 2.68419 3.27168 0.15761 11 - -
8421 1.38629 1.38629 1.38629 1.38629
8422 0.18717 4.09162 1.87089 1.46634 0.26236 1.09861 0.40547
8423 12 2.37027 0.74634 2.44366 1.06246 12 - -
8424 1.38629 1.38629 1.38629 1.38629
8425 0.03951 3.94396 3.94396 1.46634 0.26236 0.19644 1.72402
8426 13 2.90813 1.96059 2.96416 0.28363 13 - -
8427 1.38629 1.38629 1.38629 1.38629
8428 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8429 14 3.22897 2.68419 3.27168 0.15761 14 - -
8430 1.38629 1.38629 1.38629 1.38629
8431 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8432 15 3.04077 3.72472 0.10321 3.64403 15 - -
8433 1.38629 1.38629 1.38629 1.38629
8434 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8435 16 3.04077 3.72472 0.10321 3.64403 16 - -
8436 1.38629 1.38629 1.38629 1.38629
8437 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8438 17 2.90813 1.96059 2.96416 0.28363 17 - -
8439 1.38629 1.38629 1.38629 1.38629
8440 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8441 18 2.48587 0.87739 2.55718 0.85954 18 - -
8442 1.38629 1.38629 1.38629 1.38629
8443 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8444 19 3.04077 3.72472 0.10321 3.64403 19 - -
8445 1.38629 1.38629 1.38629 1.38629
8446 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8447 20 0.12508 3.51713 2.89021 3.43205 20 - -
8448 1.38629 1.38629 1.38629 1.38629
8449 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8450 21 1.83922 3.03603 0.30309 2.90955 21 - -
8451 1.38629 1.38629 1.38629 1.38629
8452 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8453 22 3.04077 3.72472 0.10321 3.64403 22 - -
8454 1.38629 1.38629 1.38629 1.38629
8455 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8456 23 3.04077 3.72472 0.10321 3.64403 23 - -
8457 1.38629 1.38629 1.38629 1.38629
8458 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8459 24 3.58999 0.11296 3.63254 2.94190 24 - -
8460 1.38629 1.38629 1.38629 1.38629
8461 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8462 25 0.12508 3.51713 2.89021 3.43205 25 - -
8463 1.38629 1.38629 1.38629 1.38629
8464 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8465 26 3.58999 0.11296 3.63254 2.94190 26 - -
8466 1.38629 1.38629 1.38629 1.38629
8467 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8468 27 3.04077 3.72472 0.10321 3.64403 27 - -
8469 1.38629 1.38629 1.38629 1.38629
8470 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8471 28 3.22897 2.68419 3.27168 0.15761 28 - -
8472 1.38629 1.38629 1.38629 1.38629
8473 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8474 29 3.58999 0.11296 3.63254 2.94190 29 - -
8475 1.38629 1.38629 1.38629 1.38629
8476 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8477 30 3.22897 2.68419 3.27168 0.15761 30 - -
8478 1.38629 1.38629 1.38629 1.38629
8479 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8480 31 3.04077 3.72472 0.10321 3.64403 31 - -
8481 1.38629 1.38629 1.38629 1.38629
8482 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8483 32 3.58999 0.11296 3.63254 2.94190 32 - -
8484 1.38629 1.38629 1.38629 1.38629
8485 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8486 33 3.07424 0.24642 3.13451 2.05058 33 - -
8487 1.38629 1.38629 1.38629 1.38629
8488 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8489 34 3.22897 2.68419 3.27168 0.15761 34 - -
8490 1.38629 1.38629 1.38629 1.38629
8491 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8492 35 3.04077 3.72472 0.10321 3.64403 35 - -
8493 1.38629 1.38629 1.38629 1.38629
8494 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8495 36 3.04077 3.72472 0.10321 3.64403 36 - -
8496 1.38629 1.38629 1.38629 1.38629
8497 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8498 37 3.04077 3.72472 0.10321 3.64403 37 - -
8499 1.38629 1.38629 1.38629 1.38629
8500 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8501 38 3.58999 0.11296 3.63254 2.94190 38 - -
8502 1.38629 1.38629 1.38629 1.38629
8503 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8504 39 3.04077 3.72472 0.10321 3.64403 39 - -
8505 1.38629 1.38629 1.38629 1.38629
8506 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8507 40 3.22897 2.68419 3.27168 0.15761 40 - -
8508 1.38629 1.38629 1.38629 1.38629
8509 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8510 41 3.58999 0.11296 3.63254 2.94190 41 - -
8511 1.38629 1.38629 1.38629 1.38629
8512 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8513 42 0.12508 3.51713 2.89021 3.43205 42 - -
8514 1.38629 1.38629 1.38629 1.38629
8515 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8516 43 3.58999 0.11296 3.63254 2.94190 43 - -
8517 1.38629 1.38629 1.38629 1.38629
8518 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8519 44 3.04077 3.72472 0.10321 3.64403 44 - -
8520 1.38629 1.38629 1.38629 1.38629
8521 0.03400 4.09162 4.09162 1.46634 0.26236 1.09861 0.40547
8522 45 3.14070 0.22357 3.19904 2.15167 45 - -
8523 1.38629 1.38629 1.38629 1.38629
8524 0.01714 4.07477 * 1.46634 0.26236 0.00000 *
8525 //
8526 HMMER3/b [3.0 | March 2010]
8527 NAME 3_End_Tracheophyta_58S_end_thirtythreeb_long
8528 LENG 45
8529 ALPH DNA
8530 RF no
8531 CS no
8532 MAP yes
8533 DATE Sat Feb 18 01:09:37 2012
8534 NSEQ 11
8535 EFFN 3.112549
8536 CKSUM 3927138524
8537 STATS LOCAL MSV -8.3070 0.71933
8538 STATS LOCAL VITERBI -7.8443 0.71933
8539 STATS LOCAL FORWARD -3.5924 0.71933
8540 HMM A C G T
8541 m->m m->i m->d i->m i->i d->m d->d
8542 COMPO 1.85214 1.06036 1.04445 1.93184
8543 1.38629 1.38629 1.38629 1.38629
8544 0.03837 3.97266 3.97266 1.46634 0.26236 0.00000 *
8545 1 2.89827 3.51656 0.12526 3.41398 1 - -
8546 1.38629 1.38629 1.38629 1.38629
8547 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8548 2 3.35264 0.14023 3.40543 2.77003 2 - -
8549 1.38629 1.38629 1.38629 1.38629
8550 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8551 3 3.35264 0.14023 3.40543 2.77003 3 - -
8552 1.38629 1.38629 1.38629 1.38629
8553 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8554 4 3.35264 0.14023 3.40543 2.77003 4 - -
8555 1.38629 1.38629 1.38629 1.38629
8556 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8557 5 2.89827 3.51656 0.12526 3.41398 5 - -
8558 1.38629 1.38629 1.38629 1.38629
8559 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8560 6 0.15146 3.31057 2.75641 3.20573 6 - -
8561 1.38629 1.38629 1.38629 1.38629
8562 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8563 7 2.89827 3.51656 0.12526 3.41398 7 - -
8564 1.38629 1.38629 1.38629 1.38629
8565 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8566 8 2.89827 3.51656 0.12526 3.41398 8 - -
8567 1.38629 1.38629 1.38629 1.38629
8568 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8569 9 3.35264 0.14023 3.40543 2.77003 9 - -
8570 1.38629 1.38629 1.38629 1.38629
8571 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8572 10 3.35264 0.14023 3.40543 2.77003 10 - -
8573 1.38629 1.38629 1.38629 1.38629
8574 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8575 11 0.43962 2.47168 2.31836 1.75538 11 - -
8576 1.38629 1.38629 1.38629 1.38629
8577 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8578 12 3.35264 0.14023 3.40543 2.77003 12 - -
8579 1.38629 1.38629 1.38629 1.38629
8580 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8581 13 3.01880 2.55062 3.06959 0.19035 13 - -
8582 1.38629 1.38629 1.38629 1.38629
8583 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8584 14 0.15146 3.31057 2.75641 3.20573 14 - -
8585 1.38629 1.38629 1.38629 1.38629
8586 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8587 15 2.89827 3.51656 0.12526 3.41398 15 - -
8588 1.38629 1.38629 1.38629 1.38629
8589 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8590 16 2.89827 3.51656 0.12526 3.41398 16 - -
8591 1.38629 1.38629 1.38629 1.38629
8592 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8593 17 3.01880 2.55062 3.06959 0.19035 17 - -
8594 1.38629 1.38629 1.38629 1.38629
8595 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8596 18 3.35264 0.14023 3.40543 2.77003 18 - -
8597 1.38629 1.38629 1.38629 1.38629
8598 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8599 19 2.89827 3.51656 0.12526 3.41398 19 - -
8600 1.38629 1.38629 1.38629 1.38629
8601 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8602 20 0.15146 3.31057 2.75641 3.20573 20 - -
8603 1.38629 1.38629 1.38629 1.38629
8604 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8605 21 2.89827 3.51656 0.12526 3.41398 21 - -
8606 1.38629 1.38629 1.38629 1.38629
8607 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8608 22 2.89827 3.51656 0.12526 3.41398 22 - -
8609 1.38629 1.38629 1.38629 1.38629
8610 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8611 23 2.89827 3.51656 0.12526 3.41398 23 - -
8612 1.38629 1.38629 1.38629 1.38629
8613 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8614 24 3.35264 0.14023 3.40543 2.77003 24 - -
8615 1.38629 1.38629 1.38629 1.38629
8616 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8617 25 0.15146 3.31057 2.75641 3.20573 25 - -
8618 1.38629 1.38629 1.38629 1.38629
8619 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8620 26 3.35264 0.14023 3.40543 2.77003 26 - -
8621 1.38629 1.38629 1.38629 1.38629
8622 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8623 27 2.89827 3.51656 0.12526 3.41398 27 - -
8624 1.38629 1.38629 1.38629 1.38629
8625 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8626 28 3.35264 0.14023 3.40543 2.77003 28 - -
8627 1.38629 1.38629 1.38629 1.38629
8628 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8629 29 3.35264 0.14023 3.40543 2.77003 29 - -
8630 1.38629 1.38629 1.38629 1.38629
8631 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8632 30 3.01880 2.55062 3.06959 0.19035 30 - -
8633 1.38629 1.38629 1.38629 1.38629
8634 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8635 31 2.89827 3.51656 0.12526 3.41398 31 - -
8636 1.38629 1.38629 1.38629 1.38629
8637 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8638 32 3.35264 0.14023 3.40543 2.77003 32 - -
8639 1.38629 1.38629 1.38629 1.38629
8640 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8641 33 3.35264 0.14023 3.40543 2.77003 33 - -
8642 1.38629 1.38629 1.38629 1.38629
8643 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8644 34 3.01880 2.55062 3.06959 0.19035 34 - -
8645 1.38629 1.38629 1.38629 1.38629
8646 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8647 35 2.89827 3.51656 0.12526 3.41398 35 - -
8648 1.38629 1.38629 1.38629 1.38629
8649 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8650 36 2.89827 3.51656 0.12526 3.41398 36 - -
8651 1.38629 1.38629 1.38629 1.38629
8652 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8653 37 2.89827 3.51656 0.12526 3.41398 37 - -
8654 1.38629 1.38629 1.38629 1.38629
8655 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8656 38 3.35264 0.14023 3.40543 2.77003 38 - -
8657 1.38629 1.38629 1.38629 1.38629
8658 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8659 39 2.89827 3.51656 0.12526 3.41398 39 - -
8660 1.38629 1.38629 1.38629 1.38629
8661 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8662 40 3.01880 2.55062 3.06959 0.19035 40 - -
8663 1.38629 1.38629 1.38629 1.38629
8664 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8665 41 3.35264 0.14023 3.40543 2.77003 41 - -
8666 1.38629 1.38629 1.38629 1.38629
8667 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8668 42 0.15146 3.31057 2.75641 3.20573 42 - -
8669 1.38629 1.38629 1.38629 1.38629
8670 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8671 43 3.35264 0.14023 3.40543 2.77003 43 - -
8672 1.38629 1.38629 1.38629 1.38629
8673 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8674 44 2.89827 3.51656 0.12526 3.41398 44 - -
8675 1.38629 1.38629 1.38629 1.38629
8676 0.03837 3.97266 3.97266 1.46634 0.26236 1.09861 0.40547
8677 45 3.35264 0.14023 3.40543 2.77003 45 - -
8678 1.38629 1.38629 1.38629 1.38629
8679 0.01937 3.95365 * 1.46634 0.26236 0.00000 *
8680 //
8681 HMMER3/b [3.0 | March 2010]
8682 NAME 3_End_Tracheophyta_58S_end_thirtythreec_long
8683 LENG 45
8684 ALPH DNA
8685 RF no
8686 CS no
8687 MAP yes
8688 DATE Sat Feb 18 01:10:01 2012
8689 NSEQ 2
8690 EFFN 2.000000
8691 CKSUM 2397806016
8692 STATS LOCAL MSV -7.4839 0.72750
8693 STATS LOCAL VITERBI -8.2729 0.72750
8694 STATS LOCAL FORWARD -3.2715 0.72750
8695 HMM A C G T
8696 m->m m->i m->d i->m i->i d->m d->d
8697 COMPO 1.66442 1.29311 1.16721 1.49143
8698 1.38629 1.38629 1.38629 1.38629
8699 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8700 1 2.53331 3.02441 0.20344 2.88069 1 - -
8701 1.38629 1.38629 1.38629 1.38629
8702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8703 2 2.81865 0.23582 2.88868 2.35662 2 - -
8704 1.38629 1.38629 1.38629 1.38629
8705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8706 3 2.81865 0.23582 2.88868 2.35662 3 - -
8707 1.38629 1.38629 1.38629 1.38629
8708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8709 4 2.81865 0.23582 2.88868 2.35662 4 - -
8710 1.38629 1.38629 1.38629 1.38629
8711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8712 5 2.53331 3.02441 0.20344 2.88069 5 - -
8713 1.38629 1.38629 1.38629 1.38629
8714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8715 6 0.23862 2.84929 2.43386 2.70756 6 - -
8716 1.38629 1.38629 1.38629 1.38629
8717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8718 7 2.53331 3.02441 0.20344 2.88069 7 - -
8719 1.38629 1.38629 1.38629 1.38629
8720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8721 8 0.23862 2.84929 2.43386 2.70756 8 - -
8722 1.38629 1.38629 1.38629 1.38629
8723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8724 9 2.81865 0.23582 2.88868 2.35662 9 - -
8725 1.38629 1.38629 1.38629 1.38629
8726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8727 10 2.81865 0.23582 2.88868 2.35662 10 - -
8728 1.38629 1.38629 1.38629 1.38629
8729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8730 11 2.57915 2.25909 2.64442 0.28946 11 - -
8731 1.38629 1.38629 1.38629 1.38629
8732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8733 12 2.57915 2.25909 2.64442 0.28946 12 - -
8734 1.38629 1.38629 1.38629 1.38629
8735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8736 13 2.57915 2.25909 2.64442 0.28946 13 - -
8737 1.38629 1.38629 1.38629 1.38629
8738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8739 14 0.23862 2.84929 2.43386 2.70756 14 - -
8740 1.38629 1.38629 1.38629 1.38629
8741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8742 15 2.53331 3.02441 0.20344 2.88069 15 - -
8743 1.38629 1.38629 1.38629 1.38629
8744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8745 16 2.53331 3.02441 0.20344 2.88069 16 - -
8746 1.38629 1.38629 1.38629 1.38629
8747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8748 17 2.57915 2.25909 2.64442 0.28946 17 - -
8749 1.38629 1.38629 1.38629 1.38629
8750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8751 18 2.57915 2.25909 2.64442 0.28946 18 - -
8752 1.38629 1.38629 1.38629 1.38629
8753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8754 19 2.53331 3.02441 0.20344 2.88069 19 - -
8755 1.38629 1.38629 1.38629 1.38629
8756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8757 20 0.23862 2.84929 2.43386 2.70756 20 - -
8758 1.38629 1.38629 1.38629 1.38629
8759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8760 21 2.53331 3.02441 0.20344 2.88069 21 - -
8761 1.38629 1.38629 1.38629 1.38629
8762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8763 22 2.53331 3.02441 0.20344 2.88069 22 - -
8764 1.38629 1.38629 1.38629 1.38629
8765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8766 23 2.53331 3.02441 0.20344 2.88069 23 - -
8767 1.38629 1.38629 1.38629 1.38629
8768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8769 24 2.81865 0.23582 2.88868 2.35662 24 - -
8770 1.38629 1.38629 1.38629 1.38629
8771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8772 25 0.23862 2.84929 2.43386 2.70756 25 - -
8773 1.38629 1.38629 1.38629 1.38629
8774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8775 26 2.81865 0.23582 2.88868 2.35662 26 - -
8776 1.38629 1.38629 1.38629 1.38629
8777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8778 27 0.23862 2.84929 2.43386 2.70756 27 - -
8779 1.38629 1.38629 1.38629 1.38629
8780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8781 28 2.81865 0.23582 2.88868 2.35662 28 - -
8782 1.38629 1.38629 1.38629 1.38629
8783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8784 29 2.81865 0.23582 2.88868 2.35662 29 - -
8785 1.38629 1.38629 1.38629 1.38629
8786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8787 30 2.57915 2.25909 2.64442 0.28946 30 - -
8788 1.38629 1.38629 1.38629 1.38629
8789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8790 31 2.53331 3.02441 0.20344 2.88069 31 - -
8791 1.38629 1.38629 1.38629 1.38629
8792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8793 32 2.81865 0.23582 2.88868 2.35662 32 - -
8794 1.38629 1.38629 1.38629 1.38629
8795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8796 33 2.57915 2.25909 2.64442 0.28946 33 - -
8797 1.38629 1.38629 1.38629 1.38629
8798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8799 34 2.57915 2.25909 2.64442 0.28946 34 - -
8800 1.38629 1.38629 1.38629 1.38629
8801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8802 35 2.53331 3.02441 0.20344 2.88069 35 - -
8803 1.38629 1.38629 1.38629 1.38629
8804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8805 36 2.53331 3.02441 0.20344 2.88069 36 - -
8806 1.38629 1.38629 1.38629 1.38629
8807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8808 37 2.53331 3.02441 0.20344 2.88069 37 - -
8809 1.38629 1.38629 1.38629 1.38629
8810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8811 38 2.81865 0.23582 2.88868 2.35662 38 - -
8812 1.38629 1.38629 1.38629 1.38629
8813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8814 39 2.53331 3.02441 0.20344 2.88069 39 - -
8815 1.38629 1.38629 1.38629 1.38629
8816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8817 40 2.57915 2.25909 2.64442 0.28946 40 - -
8818 1.38629 1.38629 1.38629 1.38629
8819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8820 41 2.81865 0.23582 2.88868 2.35662 41 - -
8821 1.38629 1.38629 1.38629 1.38629
8822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8823 42 0.23862 2.84929 2.43386 2.70756 42 - -
8824 1.38629 1.38629 1.38629 1.38629
8825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8826 43 2.57915 2.25909 2.64442 0.28946 43 - -
8827 1.38629 1.38629 1.38629 1.38629
8828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8829 44 2.53331 3.02441 0.20344 2.88069 44 - -
8830 1.38629 1.38629 1.38629 1.38629
8831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8832 45 2.81865 0.23582 2.88868 2.35662 45 - -
8833 1.38629 1.38629 1.38629 1.38629
8834 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8835 //
8836 HMMER3/b [3.0 | March 2010]
8837 NAME 3_End_Tracheophyta_58S_end_thirtythreed_long
8838 LENG 45
8839 ALPH DNA
8840 RF no
8841 CS no
8842 MAP yes
8843 DATE Sat Feb 18 01:10:10 2012
8844 NSEQ 2
8845 EFFN 2.000000
8846 CKSUM 344474445
8847 STATS LOCAL MSV -7.3987 0.72853
8848 STATS LOCAL VITERBI -8.1953 0.72853
8849 STATS LOCAL FORWARD -3.3486 0.72853
8850 HMM A C G T
8851 m->m m->i m->d i->m i->i d->m d->d
8852 COMPO 1.58413 1.25576 1.21039 1.55149
8853 1.38629 1.38629 1.38629 1.38629
8854 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
8855 1 2.53331 3.02441 0.20344 2.88069 1 - -
8856 1.38629 1.38629 1.38629 1.38629
8857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8858 2 2.81865 0.23582 2.88868 2.35662 2 - -
8859 1.38629 1.38629 1.38629 1.38629
8860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8861 3 2.81865 0.23582 2.88868 2.35662 3 - -
8862 1.38629 1.38629 1.38629 1.38629
8863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8864 4 2.57915 2.25909 2.64442 0.28946 4 - -
8865 1.38629 1.38629 1.38629 1.38629
8866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8867 5 2.53331 3.02441 0.20344 2.88069 5 - -
8868 1.38629 1.38629 1.38629 1.38629
8869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8870 6 0.23862 2.84929 2.43386 2.70756 6 - -
8871 1.38629 1.38629 1.38629 1.38629
8872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8873 7 0.23862 2.84929 2.43386 2.70756 7 - -
8874 1.38629 1.38629 1.38629 1.38629
8875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8876 8 2.53331 3.02441 0.20344 2.88069 8 - -
8877 1.38629 1.38629 1.38629 1.38629
8878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8879 9 2.81865 0.23582 2.88868 2.35662 9 - -
8880 1.38629 1.38629 1.38629 1.38629
8881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8882 10 2.81865 0.23582 2.88868 2.35662 10 - -
8883 1.38629 1.38629 1.38629 1.38629
8884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8885 11 0.23862 2.84929 2.43386 2.70756 11 - -
8886 1.38629 1.38629 1.38629 1.38629
8887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8888 12 2.57915 2.25909 2.64442 0.28946 12 - -
8889 1.38629 1.38629 1.38629 1.38629
8890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8891 13 2.57915 2.25909 2.64442 0.28946 13 - -
8892 1.38629 1.38629 1.38629 1.38629
8893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8894 14 2.81865 0.23582 2.88868 2.35662 14 - -
8895 1.38629 1.38629 1.38629 1.38629
8896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8897 15 2.53331 3.02441 0.20344 2.88069 15 - -
8898 1.38629 1.38629 1.38629 1.38629
8899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8900 16 0.23862 2.84929 2.43386 2.70756 16 - -
8901 1.38629 1.38629 1.38629 1.38629
8902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8903 17 2.15554 1.00938 2.23102 0.88601 17 - -
8904 1.38629 1.38629 1.38629 1.38629
8905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8906 18 2.81865 0.23582 2.88868 2.35662 18 - -
8907 1.38629 1.38629 1.38629 1.38629
8908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8909 19 2.53331 3.02441 0.20344 2.88069 19 - -
8910 1.38629 1.38629 1.38629 1.38629
8911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8912 20 0.23862 2.84929 2.43386 2.70756 20 - -
8913 1.38629 1.38629 1.38629 1.38629
8914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8915 21 2.53331 3.02441 0.20344 2.88069 21 - -
8916 1.38629 1.38629 1.38629 1.38629
8917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8918 22 2.53331 3.02441 0.20344 2.88069 22 - -
8919 1.38629 1.38629 1.38629 1.38629
8920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8921 23 2.53331 3.02441 0.20344 2.88069 23 - -
8922 1.38629 1.38629 1.38629 1.38629
8923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8924 24 2.81865 0.23582 2.88868 2.35662 24 - -
8925 1.38629 1.38629 1.38629 1.38629
8926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8927 25 0.23862 2.84929 2.43386 2.70756 25 - -
8928 1.38629 1.38629 1.38629 1.38629
8929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8930 26 2.81865 0.23582 2.88868 2.35662 26 - -
8931 1.38629 1.38629 1.38629 1.38629
8932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8933 27 2.53331 3.02441 0.20344 2.88069 27 - -
8934 1.38629 1.38629 1.38629 1.38629
8935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8936 28 2.57915 2.25909 2.64442 0.28946 28 - -
8937 1.38629 1.38629 1.38629 1.38629
8938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8939 29 2.81865 0.23582 2.88868 2.35662 29 - -
8940 1.38629 1.38629 1.38629 1.38629
8941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8942 30 2.57915 2.25909 2.64442 0.28946 30 - -
8943 1.38629 1.38629 1.38629 1.38629
8944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8945 31 2.53331 3.02441 0.20344 2.88069 31 - -
8946 1.38629 1.38629 1.38629 1.38629
8947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8948 32 2.81865 0.23582 2.88868 2.35662 32 - -
8949 1.38629 1.38629 1.38629 1.38629
8950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8951 33 2.15554 1.00938 2.23102 0.88601 33 - -
8952 1.38629 1.38629 1.38629 1.38629
8953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8954 34 2.57915 2.25909 2.64442 0.28946 34 - -
8955 1.38629 1.38629 1.38629 1.38629
8956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8957 35 2.53331 3.02441 0.20344 2.88069 35 - -
8958 1.38629 1.38629 1.38629 1.38629
8959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8960 36 2.53331 3.02441 0.20344 2.88069 36 - -
8961 1.38629 1.38629 1.38629 1.38629
8962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8963 37 2.53331 3.02441 0.20344 2.88069 37 - -
8964 1.38629 1.38629 1.38629 1.38629
8965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8966 38 2.57915 2.25909 2.64442 0.28946 38 - -
8967 1.38629 1.38629 1.38629 1.38629
8968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8969 39 2.53331 3.02441 0.20344 2.88069 39 - -
8970 1.38629 1.38629 1.38629 1.38629
8971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8972 40 2.57915 2.25909 2.64442 0.28946 40 - -
8973 1.38629 1.38629 1.38629 1.38629
8974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8975 41 2.81865 0.23582 2.88868 2.35662 41 - -
8976 1.38629 1.38629 1.38629 1.38629
8977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8978 42 0.23862 2.84929 2.43386 2.70756 42 - -
8979 1.38629 1.38629 1.38629 1.38629
8980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8981 43 2.81865 0.23582 2.88868 2.35662 43 - -
8982 1.38629 1.38629 1.38629 1.38629
8983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8984 44 0.23862 2.84929 2.43386 2.70756 44 - -
8985 1.38629 1.38629 1.38629 1.38629
8986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
8987 45 2.81865 0.23582 2.88868 2.35662 45 - -
8988 1.38629 1.38629 1.38629 1.38629
8989 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
8990 //
8991 HMMER3/b [3.0 | March 2010]
8992 NAME 3_End_Tracheophyta_58S_end_thirtythreee_long
8993 LENG 45
8994 ALPH DNA
8995 RF no
8996 CS no
8997 MAP yes
8998 DATE Sat Feb 18 01:10:27 2012
8999 NSEQ 2
9000 EFFN 2.000000
9001 CKSUM 3848995925
9002 STATS LOCAL MSV -7.4459 0.72796
9003 STATS LOCAL VITERBI -8.2472 0.72796
9004 STATS LOCAL FORWARD -3.2509 0.72796
9005 HMM A C G T
9006 m->m m->i m->d i->m i->i d->m d->d
9007 COMPO 1.56353 1.28022 1.16180 1.61092
9008 1.38629 1.38629 1.38629 1.38629
9009 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9010 1 2.53331 3.02441 0.20344 2.88069 1 - -
9011 1.38629 1.38629 1.38629 1.38629
9012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9013 2 2.81865 0.23582 2.88868 2.35662 2 - -
9014 1.38629 1.38629 1.38629 1.38629
9015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9016 3 2.81865 0.23582 2.88868 2.35662 3 - -
9017 1.38629 1.38629 1.38629 1.38629
9018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9019 4 2.81865 0.23582 2.88868 2.35662 4 - -
9020 1.38629 1.38629 1.38629 1.38629
9021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9022 5 0.23862 2.84929 2.43386 2.70756 5 - -
9023 1.38629 1.38629 1.38629 1.38629
9024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9025 6 2.53331 3.02441 0.20344 2.88069 6 - -
9026 1.38629 1.38629 1.38629 1.38629
9027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9028 7 0.23862 2.84929 2.43386 2.70756 7 - -
9029 1.38629 1.38629 1.38629 1.38629
9030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9031 8 2.53331 3.02441 0.20344 2.88069 8 - -
9032 1.38629 1.38629 1.38629 1.38629
9033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9034 9 0.23862 2.84929 2.43386 2.70756 9 - -
9035 1.38629 1.38629 1.38629 1.38629
9036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9037 10 2.81865 0.23582 2.88868 2.35662 10 - -
9038 1.38629 1.38629 1.38629 1.38629
9039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9040 11 0.23862 2.84929 2.43386 2.70756 11 - -
9041 1.38629 1.38629 1.38629 1.38629
9042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9043 12 2.57915 2.25909 2.64442 0.28946 12 - -
9044 1.38629 1.38629 1.38629 1.38629
9045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9046 13 2.57915 2.25909 2.64442 0.28946 13 - -
9047 1.38629 1.38629 1.38629 1.38629
9048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9049 14 2.57915 2.25909 2.64442 0.28946 14 - -
9050 1.38629 1.38629 1.38629 1.38629
9051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9052 15 2.53331 3.02441 0.20344 2.88069 15 - -
9053 1.38629 1.38629 1.38629 1.38629
9054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9055 16 2.53331 3.02441 0.20344 2.88069 16 - -
9056 1.38629 1.38629 1.38629 1.38629
9057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9058 17 2.81865 0.23582 2.88868 2.35662 17 - -
9059 1.38629 1.38629 1.38629 1.38629
9060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9061 18 1.01448 1.11006 1.95471 1.79419 18 - -
9062 1.38629 1.38629 1.38629 1.38629
9063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9064 19 2.53331 3.02441 0.20344 2.88069 19 - -
9065 1.38629 1.38629 1.38629 1.38629
9066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9067 20 0.23862 2.84929 2.43386 2.70756 20 - -
9068 1.38629 1.38629 1.38629 1.38629
9069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9070 21 2.53331 3.02441 0.20344 2.88069 21 - -
9071 1.38629 1.38629 1.38629 1.38629
9072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9073 22 2.53331 3.02441 0.20344 2.88069 22 - -
9074 1.38629 1.38629 1.38629 1.38629
9075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9076 23 2.53331 3.02441 0.20344 2.88069 23 - -
9077 1.38629 1.38629 1.38629 1.38629
9078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9079 24 2.81865 0.23582 2.88868 2.35662 24 - -
9080 1.38629 1.38629 1.38629 1.38629
9081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9082 25 0.23862 2.84929 2.43386 2.70756 25 - -
9083 1.38629 1.38629 1.38629 1.38629
9084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9085 26 2.81865 0.23582 2.88868 2.35662 26 - -
9086 1.38629 1.38629 1.38629 1.38629
9087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9088 27 2.53331 3.02441 0.20344 2.88069 27 - -
9089 1.38629 1.38629 1.38629 1.38629
9090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9091 28 2.57915 2.25909 2.64442 0.28946 28 - -
9092 1.38629 1.38629 1.38629 1.38629
9093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9094 29 2.81865 0.23582 2.88868 2.35662 29 - -
9095 1.38629 1.38629 1.38629 1.38629
9096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9097 30 2.57915 2.25909 2.64442 0.28946 30 - -
9098 1.38629 1.38629 1.38629 1.38629
9099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9100 31 2.53331 3.02441 0.20344 2.88069 31 - -
9101 1.38629 1.38629 1.38629 1.38629
9102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9103 32 2.81865 0.23582 2.88868 2.35662 32 - -
9104 1.38629 1.38629 1.38629 1.38629
9105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9106 33 2.81865 0.23582 2.88868 2.35662 33 - -
9107 1.38629 1.38629 1.38629 1.38629
9108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9109 34 2.57915 2.25909 2.64442 0.28946 34 - -
9110 1.38629 1.38629 1.38629 1.38629
9111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9112 35 2.53331 3.02441 0.20344 2.88069 35 - -
9113 1.38629 1.38629 1.38629 1.38629
9114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9115 36 2.53331 3.02441 0.20344 2.88069 36 - -
9116 1.38629 1.38629 1.38629 1.38629
9117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9118 37 2.53331 3.02441 0.20344 2.88069 37 - -
9119 1.38629 1.38629 1.38629 1.38629
9120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9121 38 2.57915 2.25909 2.64442 0.28946 38 - -
9122 1.38629 1.38629 1.38629 1.38629
9123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9124 39 2.53331 3.02441 0.20344 2.88069 39 - -
9125 1.38629 1.38629 1.38629 1.38629
9126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9127 40 2.57915 2.25909 2.64442 0.28946 40 - -
9128 1.38629 1.38629 1.38629 1.38629
9129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9130 41 2.81865 0.23582 2.88868 2.35662 41 - -
9131 1.38629 1.38629 1.38629 1.38629
9132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9133 42 0.23862 2.84929 2.43386 2.70756 42 - -
9134 1.38629 1.38629 1.38629 1.38629
9135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9136 43 2.81865 0.23582 2.88868 2.35662 43 - -
9137 1.38629 1.38629 1.38629 1.38629
9138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9139 44 0.23862 2.84929 2.43386 2.70756 44 - -
9140 1.38629 1.38629 1.38629 1.38629
9141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9142 45 2.81865 0.23582 2.88868 2.35662 45 - -
9143 1.38629 1.38629 1.38629 1.38629
9144 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9145 //
9146 HMMER3/b [3.0 | March 2010]
9147 NAME 3_End_Tracheophyta_58S_end_thirtythreef_long
9148 LENG 45
9149 ALPH DNA
9150 RF no
9151 CS no
9152 MAP yes
9153 DATE Sat Feb 18 01:10:35 2012
9154 NSEQ 2
9155 EFFN 2.000000
9156 CKSUM 2055483089
9157 STATS LOCAL MSV -7.5686 0.72740
9158 STATS LOCAL VITERBI -8.0498 0.72740
9159 STATS LOCAL FORWARD -3.3915 0.72740
9160 HMM A C G T
9161 m->m m->i m->d i->m i->i d->m d->d
9162 COMPO 1.52192 1.35165 1.16450 1.55678
9163 1.38629 1.38629 1.38629 1.38629
9164 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
9165 1 2.53331 3.02441 0.20344 2.88069 1 - -
9166 1.38629 1.38629 1.38629 1.38629
9167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9168 2 2.81865 0.23582 2.88868 2.35662 2 - -
9169 1.38629 1.38629 1.38629 1.38629
9170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9171 3 2.81865 0.23582 2.88868 2.35662 3 - -
9172 1.38629 1.38629 1.38629 1.38629
9173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9174 4 2.81865 0.23582 2.88868 2.35662 4 - -
9175 1.38629 1.38629 1.38629 1.38629
9176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9177 5 0.23862 2.84929 2.43386 2.70756 5 - -
9178 1.38629 1.38629 1.38629 1.38629
9179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9180 6 0.23862 2.84929 2.43386 2.70756 6 - -
9181 1.38629 1.38629 1.38629 1.38629
9182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9183 7 0.23862 2.84929 2.43386 2.70756 7 - -
9184 1.38629 1.38629 1.38629 1.38629
9185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9186 8 2.53331 3.02441 0.20344 2.88069 8 - -
9187 1.38629 1.38629 1.38629 1.38629
9188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9189 9 2.81865 0.23582 2.88868 2.35662 9 - -
9190 1.38629 1.38629 1.38629 1.38629
9191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9192 10 2.81865 0.23582 2.88868 2.35662 10 - -
9193 1.38629 1.38629 1.38629 1.38629
9194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9195 11 0.23862 2.84929 2.43386 2.70756 11 - -
9196 1.38629 1.38629 1.38629 1.38629
9197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9198 12 2.57915 2.25909 2.64442 0.28946 12 - -
9199 1.38629 1.38629 1.38629 1.38629
9200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9201 13 2.57915 2.25909 2.64442 0.28946 13 - -
9202 1.38629 1.38629 1.38629 1.38629
9203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9204 14 0.23862 2.84929 2.43386 2.70756 14 - -
9205 1.38629 1.38629 1.38629 1.38629
9206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9207 15 2.53331 3.02441 0.20344 2.88069 15 - -
9208 1.38629 1.38629 1.38629 1.38629
9209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9210 16 2.53331 3.02441 0.20344 2.88069 16 - -
9211 1.38629 1.38629 1.38629 1.38629
9212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9213 17 2.81865 0.23582 2.88868 2.35662 17 - -
9214 1.38629 1.38629 1.38629 1.38629
9215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9216 18 2.57915 2.25909 2.64442 0.28946 18 - -
9217 1.38629 1.38629 1.38629 1.38629
9218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9219 19 2.53331 3.02441 0.20344 2.88069 19 - -
9220 1.38629 1.38629 1.38629 1.38629
9221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9222 20 0.23862 2.84929 2.43386 2.70756 20 - -
9223 1.38629 1.38629 1.38629 1.38629
9224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9225 21 2.53331 3.02441 0.20344 2.88069 21 - -
9226 1.38629 1.38629 1.38629 1.38629
9227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9228 22 2.53331 3.02441 0.20344 2.88069 22 - -
9229 1.38629 1.38629 1.38629 1.38629
9230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9231 23 2.53331 3.02441 0.20344 2.88069 23 - -
9232 1.38629 1.38629 1.38629 1.38629
9233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9234 24 2.81865 0.23582 2.88868 2.35662 24 - -
9235 1.38629 1.38629 1.38629 1.38629
9236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9237 25 0.23862 2.84929 2.43386 2.70756 25 - -
9238 1.38629 1.38629 1.38629 1.38629
9239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9240 26 2.57915 2.25909 2.64442 0.28946 26 - -
9241 1.38629 1.38629 1.38629 1.38629
9242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9243 27 2.53331 3.02441 0.20344 2.88069 27 - -
9244 1.38629 1.38629 1.38629 1.38629
9245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9246 28 2.57915 2.25909 2.64442 0.28946 28 - -
9247 1.38629 1.38629 1.38629 1.38629
9248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9249 29 2.81865 0.23582 2.88868 2.35662 29 - -
9250 1.38629 1.38629 1.38629 1.38629
9251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9252 30 2.57915 2.25909 2.64442 0.28946 30 - -
9253 1.38629 1.38629 1.38629 1.38629
9254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9255 31 0.23862 2.84929 2.43386 2.70756 31 - -
9256 1.38629 1.38629 1.38629 1.38629
9257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9258 32 2.53331 3.02441 0.20344 2.88069 32 - -
9259 1.38629 1.38629 1.38629 1.38629
9260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9261 33 2.81865 0.23582 2.88868 2.35662 33 - -
9262 1.38629 1.38629 1.38629 1.38629
9263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9264 34 2.57915 2.25909 2.64442 0.28946 34 - -
9265 1.38629 1.38629 1.38629 1.38629
9266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9267 35 2.53331 3.02441 0.20344 2.88069 35 - -
9268 1.38629 1.38629 1.38629 1.38629
9269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9270 36 2.53331 3.02441 0.20344 2.88069 36 - -
9271 1.38629 1.38629 1.38629 1.38629
9272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9273 37 2.53331 3.02441 0.20344 2.88069 37 - -
9274 1.38629 1.38629 1.38629 1.38629
9275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9276 38 2.57915 2.25909 2.64442 0.28946 38 - -
9277 1.38629 1.38629 1.38629 1.38629
9278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9279 39 2.53331 3.02441 0.20344 2.88069 39 - -
9280 1.38629 1.38629 1.38629 1.38629
9281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9282 40 2.57915 2.25909 2.64442 0.28946 40 - -
9283 1.38629 1.38629 1.38629 1.38629
9284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9285 41 2.81865 0.23582 2.88868 2.35662 41 - -
9286 1.38629 1.38629 1.38629 1.38629
9287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9288 42 0.23862 2.84929 2.43386 2.70756 42 - -
9289 1.38629 1.38629 1.38629 1.38629
9290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9291 43 2.81865 0.23582 2.88868 2.35662 43 - -
9292 1.38629 1.38629 1.38629 1.38629
9293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9294 44 2.53331 3.02441 0.20344 2.88069 44 - -
9295 1.38629 1.38629 1.38629 1.38629
9296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9297 45 2.81865 0.23582 2.88868 2.35662 45 - -
9298 1.38629 1.38629 1.38629 1.38629
9299 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9300 //
9301 HMMER3/b [3.0 | March 2010]
9302 NAME 3_End_Tracheophyta_58S_end_thirtytwo_long
9303 LENG 45
9304 ALPH DNA
9305 RF no
9306 CS no
9307 MAP yes
9308 DATE Sat Feb 18 01:09:18 2012
9309 NSEQ 17
9310 EFFN 3.357666
9311 CKSUM 685826610
9312 STATS LOCAL MSV -8.2223 0.71932
9313 STATS LOCAL VITERBI -7.8316 0.71932
9314 STATS LOCAL FORWARD -4.1028 0.71932
9315 HMM A C G T
9316 m->m m->i m->d i->m i->i d->m d->d
9317 COMPO 1.73227 1.24820 1.13451 1.53936
9318 1.38629 1.38629 1.38629 1.38629
9319 0.03665 4.01776 4.01776 1.46634 0.26236 0.00000 *
9320 1 2.95528 3.59904 0.11593 3.50489 1 - -
9321 1.38629 1.38629 1.38629 1.38629
9322 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9323 2 3.44594 0.12869 3.49485 2.83833 2 - -
9324 1.38629 1.38629 1.38629 1.38629
9325 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9326 3 3.44594 0.12869 3.49485 2.83833 3 - -
9327 1.38629 1.38629 1.38629 1.38629
9328 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9329 4 3.44594 0.12869 3.49485 2.83833 4 - -
9330 1.38629 1.38629 1.38629 1.38629
9331 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9332 5 2.95528 3.59904 0.11593 3.50489 5 - -
9333 1.38629 1.38629 1.38629 1.38629
9334 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9335 6 0.14043 3.39140 2.80915 3.29412 6 - -
9336 1.38629 1.38629 1.38629 1.38629
9337 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9338 7 2.95528 3.59904 0.11593 3.50489 7 - -
9339 1.38629 1.38629 1.38629 1.38629
9340 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9341 8 2.95528 3.59904 0.11593 3.50489 8 - -
9342 1.38629 1.38629 1.38629 1.38629
9343 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9344 9 3.44594 0.12869 3.49485 2.83833 9 - -
9345 1.38629 1.38629 1.38629 1.38629
9346 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9347 10 3.44594 0.12869 3.49485 2.83833 10 - -
9348 1.38629 1.38629 1.38629 1.38629
9349 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9350 11 3.09986 2.60230 3.14759 0.17687 11 - -
9351 1.38629 1.38629 1.38629 1.38629
9352 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9353 12 3.09986 2.60230 3.14759 0.17687 12 - -
9354 1.38629 1.38629 1.38629 1.38629
9355 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9356 13 2.55050 1.44909 2.61765 0.48744 13 - -
9357 1.38629 1.38629 1.38629 1.38629
9358 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9359 14 3.19210 0.18897 3.24878 2.38295 14 - -
9360 1.38629 1.38629 1.38629 1.38629
9361 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9362 15 2.95528 3.59904 0.11593 3.50489 15 - -
9363 1.38629 1.38629 1.38629 1.38629
9364 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9365 16 2.95528 3.59904 0.11593 3.50489 16 - -
9366 1.38629 1.38629 1.38629 1.38629
9367 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9368 17 3.09986 2.60230 3.14759 0.17687 17 - -
9369 1.38629 1.38629 1.38629 1.38629
9370 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9371 18 3.44594 0.12869 3.49485 2.83833 18 - -
9372 1.38629 1.38629 1.38629 1.38629
9373 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9374 19 2.95528 3.59904 0.11593 3.50489 19 - -
9375 1.38629 1.38629 1.38629 1.38629
9376 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9377 20 0.14043 3.39140 2.80915 3.29412 20 - -
9378 1.38629 1.38629 1.38629 1.38629
9379 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9380 21 2.95528 3.59904 0.11593 3.50489 21 - -
9381 1.38629 1.38629 1.38629 1.38629
9382 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9383 22 2.95528 3.59904 0.11593 3.50489 22 - -
9384 1.38629 1.38629 1.38629 1.38629
9385 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9386 23 2.95528 3.59904 0.11593 3.50489 23 - -
9387 1.38629 1.38629 1.38629 1.38629
9388 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9389 24 3.44594 0.12869 3.49485 2.83833 24 - -
9390 1.38629 1.38629 1.38629 1.38629
9391 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9392 25 0.14043 3.39140 2.80915 3.29412 25 - -
9393 1.38629 1.38629 1.38629 1.38629
9394 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9395 26 3.44594 0.12869 3.49485 2.83833 26 - -
9396 1.38629 1.38629 1.38629 1.38629
9397 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9398 27 0.14043 3.39140 2.80915 3.29412 27 - -
9399 1.38629 1.38629 1.38629 1.38629
9400 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9401 28 3.09986 2.60230 3.14759 0.17687 28 - -
9402 1.38629 1.38629 1.38629 1.38629
9403 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9404 29 3.44594 0.12869 3.49485 2.83833 29 - -
9405 1.38629 1.38629 1.38629 1.38629
9406 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9407 30 3.09986 2.60230 3.14759 0.17687 30 - -
9408 1.38629 1.38629 1.38629 1.38629
9409 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9410 31 2.95528 3.59904 0.11593 3.50489 31 - -
9411 1.38629 1.38629 1.38629 1.38629
9412 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9413 32 3.44594 0.12869 3.49485 2.83833 32 - -
9414 1.38629 1.38629 1.38629 1.38629
9415 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9416 33 3.09986 2.60230 3.14759 0.17687 33 - -
9417 1.38629 1.38629 1.38629 1.38629
9418 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9419 34 3.09986 2.60230 3.14759 0.17687 34 - -
9420 1.38629 1.38629 1.38629 1.38629
9421 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9422 35 2.95528 3.59904 0.11593 3.50489 35 - -
9423 1.38629 1.38629 1.38629 1.38629
9424 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9425 36 2.95528 3.59904 0.11593 3.50489 36 - -
9426 1.38629 1.38629 1.38629 1.38629
9427 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9428 37 2.95528 3.59904 0.11593 3.50489 37 - -
9429 1.38629 1.38629 1.38629 1.38629
9430 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9431 38 3.44594 0.12869 3.49485 2.83833 38 - -
9432 1.38629 1.38629 1.38629 1.38629
9433 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9434 39 2.95528 3.59904 0.11593 3.50489 39 - -
9435 1.38629 1.38629 1.38629 1.38629
9436 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9437 40 3.09986 2.60230 3.14759 0.17687 40 - -
9438 1.38629 1.38629 1.38629 1.38629
9439 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9440 41 2.71645 1.78494 2.77818 0.35107 41 - -
9441 1.38629 1.38629 1.38629 1.38629
9442 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9443 42 0.24390 3.06038 2.14653 2.94357 42 - -
9444 1.38629 1.38629 1.38629 1.38629
9445 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9446 43 0.14043 3.39140 2.80915 3.29412 43 - -
9447 1.38629 1.38629 1.38629 1.38629
9448 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9449 44 0.14043 3.39140 2.80915 3.29412 44 - -
9450 1.38629 1.38629 1.38629 1.38629
9451 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
9452 45 3.44594 0.12869 3.49485 2.83833 45 - -
9453 1.38629 1.38629 1.38629 1.38629
9454 0.01849 3.99961 * 1.46634 0.26236 0.00000 *
9455 //
9456 HMMER3/b [3.0 | March 2010]
9457 NAME 3_End_Tracheophyta_58S_end_three_long
9458 LENG 45
9459 ALPH DNA
9460 RF no
9461 CS no
9462 MAP yes
9463 DATE Sat Feb 18 00:55:32 2012
9464 NSEQ 13
9465 EFFN 3.081787
9466 CKSUM 3827031248
9467 STATS LOCAL MSV -8.2836 0.71932
9468 STATS LOCAL VITERBI -7.6501 0.71932
9469 STATS LOCAL FORWARD -3.8247 0.71932
9470 HMM A C G T
9471 m->m m->i m->d i->m i->i d->m d->d
9472 COMPO 1.82182 1.10900 1.09622 1.74728
9473 1.38629 1.38629 1.38629 1.38629
9474 0.03860 3.96685 3.96685 1.46634 0.26236 0.00000 *
9475 1 2.89064 3.50563 0.12656 3.40196 1 - -
9476 1.38629 1.38629 1.38629 1.38629
9477 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9478 2 3.34036 0.14184 3.39364 2.76096 2 - -
9479 1.38629 1.38629 1.38629 1.38629
9480 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9481 3 3.34036 0.14184 3.39364 2.76096 3 - -
9482 1.38629 1.38629 1.38629 1.38629
9483 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9484 4 3.34036 0.14184 3.39364 2.76096 4 - -
9485 1.38629 1.38629 1.38629 1.38629
9486 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9487 5 2.89064 3.50563 0.12656 3.40196 5 - -
9488 1.38629 1.38629 1.38629 1.38629
9489 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9490 6 0.15298 3.29995 2.74942 3.19413 6 - -
9491 1.38629 1.38629 1.38629 1.38629
9492 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9493 7 0.15298 3.29995 2.74942 3.19413 7 - -
9494 1.38629 1.38629 1.38629 1.38629
9495 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9496 8 2.89064 3.50563 0.12656 3.40196 8 - -
9497 1.38629 1.38629 1.38629 1.38629
9498 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9499 9 3.34036 0.14184 3.39364 2.76096 9 - -
9500 1.38629 1.38629 1.38629 1.38629
9501 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9502 10 3.34036 0.14184 3.39364 2.76096 10 - -
9503 1.38629 1.38629 1.38629 1.38629
9504 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9505 11 3.00825 2.54387 3.05944 0.19219 11 - -
9506 1.38629 1.38629 1.38629 1.38629
9507 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9508 12 3.34036 0.14184 3.39364 2.76096 12 - -
9509 1.38629 1.38629 1.38629 1.38629
9510 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9511 13 3.00825 2.54387 3.05944 0.19219 13 - -
9512 1.38629 1.38629 1.38629 1.38629
9513 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9514 14 0.15298 3.29995 2.74942 3.19413 14 - -
9515 1.38629 1.38629 1.38629 1.38629
9516 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9517 15 2.89064 3.50563 0.12656 3.40196 15 - -
9518 1.38629 1.38629 1.38629 1.38629
9519 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9520 16 2.89064 3.50563 0.12656 3.40196 16 - -
9521 1.38629 1.38629 1.38629 1.38629
9522 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9523 17 3.34036 0.14184 3.39364 2.76096 17 - -
9524 1.38629 1.38629 1.38629 1.38629
9525 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9526 18 3.00825 2.54387 3.05944 0.19219 18 - -
9527 1.38629 1.38629 1.38629 1.38629
9528 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9529 19 2.89064 3.50563 0.12656 3.40196 19 - -
9530 1.38629 1.38629 1.38629 1.38629
9531 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9532 20 0.15298 3.29995 2.74942 3.19413 20 - -
9533 1.38629 1.38629 1.38629 1.38629
9534 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9535 21 2.89064 3.50563 0.12656 3.40196 21 - -
9536 1.38629 1.38629 1.38629 1.38629
9537 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9538 22 2.89064 3.50563 0.12656 3.40196 22 - -
9539 1.38629 1.38629 1.38629 1.38629
9540 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9541 23 2.89064 3.50563 0.12656 3.40196 23 - -
9542 1.38629 1.38629 1.38629 1.38629
9543 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9544 24 3.34036 0.14184 3.39364 2.76096 24 - -
9545 1.38629 1.38629 1.38629 1.38629
9546 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9547 25 0.15298 3.29995 2.74942 3.19413 25 - -
9548 1.38629 1.38629 1.38629 1.38629
9549 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9550 26 3.34036 0.14184 3.39364 2.76096 26 - -
9551 1.38629 1.38629 1.38629 1.38629
9552 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9553 27 2.89064 3.50563 0.12656 3.40196 27 - -
9554 1.38629 1.38629 1.38629 1.38629
9555 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9556 28 3.00825 2.54387 3.05944 0.19219 28 - -
9557 1.38629 1.38629 1.38629 1.38629
9558 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9559 29 3.34036 0.14184 3.39364 2.76096 29 - -
9560 1.38629 1.38629 1.38629 1.38629
9561 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9562 30 3.00825 2.54387 3.05944 0.19219 30 - -
9563 1.38629 1.38629 1.38629 1.38629
9564 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9565 31 2.89064 3.50563 0.12656 3.40196 31 - -
9566 1.38629 1.38629 1.38629 1.38629
9567 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9568 32 3.34036 0.14184 3.39364 2.76096 32 - -
9569 1.38629 1.38629 1.38629 1.38629
9570 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9571 33 3.34036 0.14184 3.39364 2.76096 33 - -
9572 1.38629 1.38629 1.38629 1.38629
9573 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9574 34 3.00825 2.54387 3.05944 0.19219 34 - -
9575 1.38629 1.38629 1.38629 1.38629
9576 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9577 35 2.89064 3.50563 0.12656 3.40196 35 - -
9578 1.38629 1.38629 1.38629 1.38629
9579 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9580 36 2.89064 3.50563 0.12656 3.40196 36 - -
9581 1.38629 1.38629 1.38629 1.38629
9582 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9583 37 2.89064 3.50563 0.12656 3.40196 37 - -
9584 1.38629 1.38629 1.38629 1.38629
9585 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9586 38 3.34036 0.14184 3.39364 2.76096 38 - -
9587 1.38629 1.38629 1.38629 1.38629
9588 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9589 39 2.89064 3.50563 0.12656 3.40196 39 - -
9590 1.38629 1.38629 1.38629 1.38629
9591 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9592 40 3.00825 2.54387 3.05944 0.19219 40 - -
9593 1.38629 1.38629 1.38629 1.38629
9594 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9595 41 3.34036 0.14184 3.39364 2.76096 41 - -
9596 1.38629 1.38629 1.38629 1.38629
9597 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9598 42 0.15298 3.29995 2.74942 3.19413 42 - -
9599 1.38629 1.38629 1.38629 1.38629
9600 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9601 43 3.34036 0.14184 3.39364 2.76096 43 - -
9602 1.38629 1.38629 1.38629 1.38629
9603 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9604 44 2.89064 3.50563 0.12656 3.40196 44 - -
9605 1.38629 1.38629 1.38629 1.38629
9606 0.03860 3.96685 3.96685 1.46634 0.26236 1.09861 0.40547
9607 45 3.34036 0.14184 3.39364 2.76096 45 - -
9608 1.38629 1.38629 1.38629 1.38629
9609 0.01949 3.94774 * 1.46634 0.26236 0.00000 *
9610 //
9611 HMMER3/b [3.0 | March 2010]
9612 NAME 3_End_Tracheophyta_58S_end_twelve_long
9613 LENG 45
9614 ALPH DNA
9615 RF no
9616 CS no
9617 MAP yes
9618 DATE Sat Feb 18 00:57:55 2012
9619 NSEQ 23
9620 EFFN 3.697632
9621 CKSUM 3343583042
9622 STATS LOCAL MSV -7.2508 0.71933
9623 STATS LOCAL VITERBI -7.6026 0.71933
9624 STATS LOCAL FORWARD -3.9055 0.71933
9625 HMM A C G T
9626 m->m m->i m->d i->m i->i d->m d->d
9627 COMPO 1.75713 1.13224 1.13965 1.68621
9628 1.38629 1.38629 1.38629 1.38629
9629 0.03450 4.07714 4.07714 1.46634 0.26236 0.00000 *
9630 1 3.02472 3.70099 0.10549 3.61771 1 - -
9631 1.38629 1.38629 1.38629 1.38629
9632 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9633 2 3.56263 0.11577 3.60642 2.92238 2 - -
9634 1.38629 1.38629 1.38629 1.38629
9635 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9636 3 3.56263 0.11577 3.60642 2.92238 3 - -
9637 1.38629 1.38629 1.38629 1.38629
9638 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9639 4 3.56263 0.11577 3.60642 2.92238 4 - -
9640 1.38629 1.38629 1.38629 1.38629
9641 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9642 5 3.02472 3.70099 0.10549 3.61771 5 - -
9643 1.38629 1.38629 1.38629 1.38629
9644 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9645 6 0.12785 3.49313 2.87479 3.40569 6 - -
9646 1.38629 1.38629 1.38629 1.38629
9647 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9648 7 0.12785 3.49313 2.87479 3.40569 7 - -
9649 1.38629 1.38629 1.38629 1.38629
9650 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9651 8 3.02472 3.70099 0.10549 3.61771 8 - -
9652 1.38629 1.38629 1.38629 1.38629
9653 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9654 9 3.56263 0.11577 3.60642 2.92238 9 - -
9655 1.38629 1.38629 1.38629 1.38629
9656 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9657 10 3.56263 0.11577 3.60642 2.92238 10 - -
9658 1.38629 1.38629 1.38629 1.38629
9659 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9660 11 0.65686 2.30315 2.24844 1.28730 11 - -
9661 1.38629 1.38629 1.38629 1.38629
9662 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9663 12 3.20403 2.66838 3.24772 0.16114 12 - -
9664 1.38629 1.38629 1.38629 1.38629
9665 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9666 13 3.02224 0.26115 3.08388 1.99983 13 - -
9667 1.38629 1.38629 1.38629 1.38629
9668 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9669 14 2.89152 0.31846 2.95642 1.80037 14 - -
9670 1.38629 1.38629 1.38629 1.38629
9671 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9672 15 3.02472 3.70099 0.10549 3.61771 15 - -
9673 1.38629 1.38629 1.38629 1.38629
9674 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9675 16 3.02472 3.70099 0.10549 3.61771 16 - -
9676 1.38629 1.38629 1.38629 1.38629
9677 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9678 17 2.58153 1.35406 2.64872 0.51850 17 - -
9679 1.38629 1.38629 1.38629 1.38629
9680 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9681 18 2.95974 2.10353 3.01346 0.25229 18 - -
9682 1.38629 1.38629 1.38629 1.38629
9683 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9684 19 1.88853 3.05068 0.29074 2.92499 19 - -
9685 1.38629 1.38629 1.38629 1.38629
9686 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9687 20 0.12785 3.49313 2.87479 3.40569 20 - -
9688 1.38629 1.38629 1.38629 1.38629
9689 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9690 21 3.02472 3.70099 0.10549 3.61771 21 - -
9691 1.38629 1.38629 1.38629 1.38629
9692 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9693 22 3.02472 3.70099 0.10549 3.61771 22 - -
9694 1.38629 1.38629 1.38629 1.38629
9695 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9696 23 3.02472 3.70099 0.10549 3.61771 23 - -
9697 1.38629 1.38629 1.38629 1.38629
9698 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9699 24 3.56263 0.11577 3.60642 2.92238 24 - -
9700 1.38629 1.38629 1.38629 1.38629
9701 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9702 25 0.12785 3.49313 2.87479 3.40569 25 - -
9703 1.38629 1.38629 1.38629 1.38629
9704 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9705 26 2.58153 1.35406 2.64872 0.51850 26 - -
9706 1.38629 1.38629 1.38629 1.38629
9707 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9708 27 3.02472 3.70099 0.10549 3.61771 27 - -
9709 1.38629 1.38629 1.38629 1.38629
9710 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9711 28 3.20403 2.66838 3.24772 0.16114 28 - -
9712 1.38629 1.38629 1.38629 1.38629
9713 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9714 29 3.56263 0.11577 3.60642 2.92238 29 - -
9715 1.38629 1.38629 1.38629 1.38629
9716 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9717 30 3.20403 2.66838 3.24772 0.16114 30 - -
9718 1.38629 1.38629 1.38629 1.38629
9719 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9720 31 3.02472 3.70099 0.10549 3.61771 31 - -
9721 1.38629 1.38629 1.38629 1.38629
9722 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9723 32 3.56263 0.11577 3.60642 2.92238 32 - -
9724 1.38629 1.38629 1.38629 1.38629
9725 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9726 33 3.56263 0.11577 3.60642 2.92238 33 - -
9727 1.38629 1.38629 1.38629 1.38629
9728 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9729 34 3.20403 2.66838 3.24772 0.16114 34 - -
9730 1.38629 1.38629 1.38629 1.38629
9731 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9732 35 3.02472 3.70099 0.10549 3.61771 35 - -
9733 1.38629 1.38629 1.38629 1.38629
9734 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9735 36 3.02472 3.70099 0.10549 3.61771 36 - -
9736 1.38629 1.38629 1.38629 1.38629
9737 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9738 37 3.02472 3.70099 0.10549 3.61771 37 - -
9739 1.38629 1.38629 1.38629 1.38629
9740 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9741 38 3.56263 0.11577 3.60642 2.92238 38 - -
9742 1.38629 1.38629 1.38629 1.38629
9743 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9744 39 3.02472 3.70099 0.10549 3.61771 39 - -
9745 1.38629 1.38629 1.38629 1.38629
9746 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9747 40 3.20403 2.66838 3.24772 0.16114 40 - -
9748 1.38629 1.38629 1.38629 1.38629
9749 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9750 41 3.56263 0.11577 3.60642 2.92238 41 - -
9751 1.38629 1.38629 1.38629 1.38629
9752 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9753 42 0.12785 3.49313 2.87479 3.40569 42 - -
9754 1.38629 1.38629 1.38629 1.38629
9755 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9756 43 3.56263 0.11577 3.60642 2.92238 43 - -
9757 1.38629 1.38629 1.38629 1.38629
9758 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9759 44 0.12785 3.49313 2.87479 3.40569 44 - -
9760 1.38629 1.38629 1.38629 1.38629
9761 0.03450 4.07714 4.07714 1.46634 0.26236 1.09861 0.40547
9762 45 3.56263 0.11577 3.60642 2.92238 45 - -
9763 1.38629 1.38629 1.38629 1.38629
9764 0.01740 4.06003 * 1.46634 0.26236 0.00000 *
9765 //
9766 HMMER3/b [3.0 | March 2010]
9767 NAME 3_End_Tracheophyta_58S_end_twentya_long
9768 LENG 45
9769 ALPH DNA
9770 RF no
9771 CS no
9772 MAP yes
9773 DATE Sat Feb 18 01:03:14 2012
9774 NSEQ 6
9775 EFFN 3.178711
9776 CKSUM 3928551301
9777 STATS LOCAL MSV -8.3552 0.71933
9778 STATS LOCAL VITERBI -7.9466 0.71933
9779 STATS LOCAL FORWARD -3.4318 0.71933
9780 HMM A C G T
9781 m->m m->i m->d i->m i->i d->m d->d
9782 COMPO 1.92867 1.00410 1.04349 1.99465
9783 1.38629 1.38629 1.38629 1.38629
9784 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 *
9785 1 2.91430 3.53962 0.12257 3.43936 1 - -
9786 1.38629 1.38629 1.38629 1.38629
9787 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9788 2 3.37862 0.13690 3.43035 2.78916 2 - -
9789 1.38629 1.38629 1.38629 1.38629
9790 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9791 3 3.37862 0.13690 3.43035 2.78916 3 - -
9792 1.38629 1.38629 1.38629 1.38629
9793 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9794 4 3.37862 0.13690 3.43035 2.78916 4 - -
9795 1.38629 1.38629 1.38629 1.38629
9796 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9797 5 2.37921 0.95205 2.45172 0.83176 5 - -
9798 1.38629 1.38629 1.38629 1.38629
9799 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9800 6 0.14829 3.33304 2.77114 3.23028 6 - -
9801 1.38629 1.38629 1.38629 1.38629
9802 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9803 7 2.91430 3.53962 0.12257 3.43936 7 - -
9804 1.38629 1.38629 1.38629 1.38629
9805 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9806 8 2.91430 3.53962 0.12257 3.43936 8 - -
9807 1.38629 1.38629 1.38629 1.38629
9808 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9809 9 3.37862 0.13690 3.43035 2.78916 9 - -
9810 1.38629 1.38629 1.38629 1.38629
9811 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9812 10 3.37862 0.13690 3.43035 2.78916 10 - -
9813 1.38629 1.38629 1.38629 1.38629
9814 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9815 11 2.91430 3.53962 0.12257 3.43936 11 - -
9816 1.38629 1.38629 1.38629 1.38629
9817 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9818 12 3.04119 2.56493 3.09115 0.18651 12 - -
9819 1.38629 1.38629 1.38629 1.38629
9820 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9821 13 3.37862 0.13690 3.43035 2.78916 13 - -
9822 1.38629 1.38629 1.38629 1.38629
9823 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9824 14 0.14829 3.33304 2.77114 3.23028 14 - -
9825 1.38629 1.38629 1.38629 1.38629
9826 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9827 15 2.91430 3.53962 0.12257 3.43936 15 - -
9828 1.38629 1.38629 1.38629 1.38629
9829 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9830 16 2.91430 3.53962 0.12257 3.43936 16 - -
9831 1.38629 1.38629 1.38629 1.38629
9832 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9833 17 2.79199 0.32979 2.85893 1.81835 17 - -
9834 1.38629 1.38629 1.38629 1.38629
9835 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9836 18 3.37862 0.13690 3.43035 2.78916 18 - -
9837 1.38629 1.38629 1.38629 1.38629
9838 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9839 19 2.91430 3.53962 0.12257 3.43936 19 - -
9840 1.38629 1.38629 1.38629 1.38629
9841 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9842 20 0.14829 3.33304 2.77114 3.23028 20 - -
9843 1.38629 1.38629 1.38629 1.38629
9844 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9845 21 2.91430 3.53962 0.12257 3.43936 21 - -
9846 1.38629 1.38629 1.38629 1.38629
9847 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9848 22 2.91430 3.53962 0.12257 3.43936 22 - -
9849 1.38629 1.38629 1.38629 1.38629
9850 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9851 23 2.91430 3.53962 0.12257 3.43936 23 - -
9852 1.38629 1.38629 1.38629 1.38629
9853 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9854 24 3.37862 0.13690 3.43035 2.78916 24 - -
9855 1.38629 1.38629 1.38629 1.38629
9856 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9857 25 0.14829 3.33304 2.77114 3.23028 25 - -
9858 1.38629 1.38629 1.38629 1.38629
9859 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9860 26 3.37862 0.13690 3.43035 2.78916 26 - -
9861 1.38629 1.38629 1.38629 1.38629
9862 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9863 27 2.91430 3.53962 0.12257 3.43936 27 - -
9864 1.38629 1.38629 1.38629 1.38629
9865 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9866 28 3.37862 0.13690 3.43035 2.78916 28 - -
9867 1.38629 1.38629 1.38629 1.38629
9868 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9869 29 3.37862 0.13690 3.43035 2.78916 29 - -
9870 1.38629 1.38629 1.38629 1.38629
9871 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9872 30 3.04119 2.56493 3.09115 0.18651 30 - -
9873 1.38629 1.38629 1.38629 1.38629
9874 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9875 31 2.91430 3.53962 0.12257 3.43936 31 - -
9876 1.38629 1.38629 1.38629 1.38629
9877 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9878 32 3.37862 0.13690 3.43035 2.78916 32 - -
9879 1.38629 1.38629 1.38629 1.38629
9880 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9881 33 3.37862 0.13690 3.43035 2.78916 33 - -
9882 1.38629 1.38629 1.38629 1.38629
9883 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9884 34 3.04119 2.56493 3.09115 0.18651 34 - -
9885 1.38629 1.38629 1.38629 1.38629
9886 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9887 35 2.91430 3.53962 0.12257 3.43936 35 - -
9888 1.38629 1.38629 1.38629 1.38629
9889 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9890 36 2.91430 3.53962 0.12257 3.43936 36 - -
9891 1.38629 1.38629 1.38629 1.38629
9892 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9893 37 2.91430 3.53962 0.12257 3.43936 37 - -
9894 1.38629 1.38629 1.38629 1.38629
9895 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9896 38 3.37862 0.13690 3.43035 2.78916 38 - -
9897 1.38629 1.38629 1.38629 1.38629
9898 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9899 39 2.91430 3.53962 0.12257 3.43936 39 - -
9900 1.38629 1.38629 1.38629 1.38629
9901 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9902 40 3.04119 2.56493 3.09115 0.18651 40 - -
9903 1.38629 1.38629 1.38629 1.38629
9904 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9905 41 3.37862 0.13690 3.43035 2.78916 41 - -
9906 1.38629 1.38629 1.38629 1.38629
9907 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9908 42 0.14829 3.33304 2.77114 3.23028 42 - -
9909 1.38629 1.38629 1.38629 1.38629
9910 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9911 43 3.37862 0.13690 3.43035 2.78916 43 - -
9912 1.38629 1.38629 1.38629 1.38629
9913 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9914 44 2.91430 3.53962 0.12257 3.43936 44 - -
9915 1.38629 1.38629 1.38629 1.38629
9916 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547
9917 45 3.37862 0.13690 3.43035 2.78916 45 - -
9918 1.38629 1.38629 1.38629 1.38629
9919 0.01913 3.96627 * 1.46634 0.26236 0.00000 *
9920 //
9921 HMMER3/b [3.0 | March 2010]
9922 NAME 3_End_Tracheophyta_58S_end_twentyb_long
9923 LENG 45
9924 ALPH DNA
9925 RF no
9926 CS no
9927 MAP yes
9928 DATE Sat Feb 18 01:03:24 2012
9929 NSEQ 331
9930 EFFN 4.139015
9931 CKSUM 3119287144
9932 STATS LOCAL MSV -6.8068 0.71933
9933 STATS LOCAL VITERBI -7.6332 0.71933
9934 STATS LOCAL FORWARD -3.8434 0.71933
9935 HMM A C G T
9936 m->m m->i m->d i->m i->i d->m d->d
9937 COMPO 1.88004 1.11445 1.11094 1.66036
9938 1.38629 1.38629 1.38629 1.38629
9939 0.03206 4.14931 4.14931 1.46634 0.26236 0.00000 *
9940 1 2.98484 3.77251 0.10347 3.69876 1 - -
9941 1.38629 1.38629 1.38629 1.38629
9942 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9943 2 3.58373 0.11709 3.47125 2.96333 2 - -
9944 1.38629 1.38629 1.38629 1.38629
9945 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9946 3 3.60558 0.11989 3.64702 2.81772 3 - -
9947 1.38629 1.38629 1.38629 1.38629
9948 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9949 4 3.59530 0.12193 3.63718 2.79664 4 - -
9950 1.38629 1.38629 1.38629 1.38629
9951 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9952 5 2.51204 3.44490 0.16604 3.21952 5 - -
9953 1.38629 1.38629 1.38629 1.38629
9954 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9955 6 0.11500 3.60943 2.94947 3.53352 6 - -
9956 1.38629 1.38629 1.38629 1.38629
9957 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9958 7 0.11500 3.60943 2.94947 3.53352 7 - -
9959 1.38629 1.38629 1.38629 1.38629
9960 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9961 8 2.97178 3.76747 0.10449 3.69331 8 - -
9962 1.38629 1.38629 1.38629 1.38629
9963 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9964 9 3.63724 0.11371 3.67733 2.88474 9 - -
9965 1.38629 1.38629 1.38629 1.38629
9966 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9967 10 3.69453 0.10292 3.73224 3.01595 10 - -
9968 1.38629 1.38629 1.38629 1.38629
9969 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9970 11 1.34835 2.18781 2.05143 0.69391 11 - -
9971 1.38629 1.38629 1.38629 1.38629
9972 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9973 12 3.28125 2.61853 3.32212 0.15849 12 - -
9974 1.38629 1.38629 1.38629 1.38629
9975 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9976 13 2.71505 1.44191 2.77923 0.45376 13 - -
9977 1.38629 1.38629 1.38629 1.38629
9978 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9979 14 2.29898 0.84042 2.15999 1.04191 14 - -
9980 1.38629 1.38629 1.38629 1.38629
9981 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9982 15 3.10155 3.81486 0.09505 3.74413 15 - -
9983 1.38629 1.38629 1.38629 1.38629
9984 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9985 16 3.10155 3.81486 0.09505 3.74413 16 - -
9986 1.38629 1.38629 1.38629 1.38629
9987 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9988 17 3.41770 0.16079 3.46689 2.47072 17 - -
9989 1.38629 1.38629 1.38629 1.38629
9990 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9991 18 2.86277 0.19468 3.07992 2.60603 18 - -
9992 1.38629 1.38629 1.38629 1.38629
9993 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9994 19 1.99349 3.21682 0.25020 3.09992 19 - -
9995 1.38629 1.38629 1.38629 1.38629
9996 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
9997 20 0.11500 3.60943 2.94947 3.53352 20 - -
9998 1.38629 1.38629 1.38629 1.38629
9999 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10000 21 3.10155 3.81486 0.09505 3.74413 21 - -
10001 1.38629 1.38629 1.38629 1.38629
10002 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10003 22 3.10155 3.81486 0.09505 3.74413 22 - -
10004 1.38629 1.38629 1.38629 1.38629
10005 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10006 23 3.10155 3.81486 0.09505 3.74413 23 - -
10007 1.38629 1.38629 1.38629 1.38629
10008 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10009 24 3.69453 0.10292 3.73224 3.01595 24 - -
10010 1.38629 1.38629 1.38629 1.38629
10011 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10012 25 0.11500 3.60943 2.94947 3.53352 25 - -
10013 1.38629 1.38629 1.38629 1.38629
10014 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10015 26 3.69453 0.10292 3.73224 3.01595 26 - -
10016 1.38629 1.38629 1.38629 1.38629
10017 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10018 27 3.10155 3.81486 0.09505 3.74413 27 - -
10019 1.38629 1.38629 1.38629 1.38629
10020 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10021 28 3.15346 2.30352 3.20031 0.20256 28 - -
10022 1.38629 1.38629 1.38629 1.38629
10023 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10024 29 3.06185 0.27103 3.12281 1.92022 29 - -
10025 1.38629 1.38629 1.38629 1.38629
10026 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10027 30 3.32628 2.74598 3.36515 0.14464 30 - -
10028 1.38629 1.38629 1.38629 1.38629
10029 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10030 31 3.10155 3.81486 0.09505 3.74413 31 - -
10031 1.38629 1.38629 1.38629 1.38629
10032 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10033 32 3.69453 0.10292 3.73224 3.01595 32 - -
10034 1.38629 1.38629 1.38629 1.38629
10035 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10036 33 3.69453 0.10292 3.73224 3.01595 33 - -
10037 1.38629 1.38629 1.38629 1.38629
10038 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10039 34 3.32628 2.74598 3.36515 0.14464 34 - -
10040 1.38629 1.38629 1.38629 1.38629
10041 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10042 35 3.10155 3.81486 0.09505 3.74413 35 - -
10043 1.38629 1.38629 1.38629 1.38629
10044 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10045 36 3.10155 3.81486 0.09505 3.74413 36 - -
10046 1.38629 1.38629 1.38629 1.38629
10047 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10048 37 3.10155 3.81486 0.09505 3.74413 37 - -
10049 1.38629 1.38629 1.38629 1.38629
10050 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10051 38 3.28884 2.63924 3.32935 0.15610 38 - -
10052 1.38629 1.38629 1.38629 1.38629
10053 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10054 39 3.10155 3.81486 0.09505 3.74413 39 - -
10055 1.38629 1.38629 1.38629 1.38629
10056 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10057 40 3.32628 2.74598 3.36515 0.14464 40 - -
10058 1.38629 1.38629 1.38629 1.38629
10059 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10060 41 3.69453 0.10292 3.73224 3.01595 41 - -
10061 1.38629 1.38629 1.38629 1.38629
10062 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10063 42 0.11500 3.60943 2.94947 3.53352 42 - -
10064 1.38629 1.38629 1.38629 1.38629
10065 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10066 43 3.55874 0.12936 3.60218 2.72411 43 - -
10067 1.38629 1.38629 1.38629 1.38629
10068 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10069 44 1.65203 2.17464 0.87123 1.28643 44 - -
10070 1.38629 1.38629 1.38629 1.38629
10071 0.03206 4.14931 4.14931 1.46634 0.26236 1.09861 0.40547
10072 45 3.62344 0.11638 3.66411 2.85511 45 - -
10073 1.38629 1.38629 1.38629 1.38629
10074 0.01616 4.13341 * 1.46634 0.26236 0.00000 *
10075 //
10076 HMMER3/b [3.0 | March 2010]
10077 NAME 3_End_Tracheophyta_58S_end_twentyeight_long
10078 LENG 45
10079 ALPH DNA
10080 RF no
10081 CS no
10082 MAP yes
10083 DATE Sat Feb 18 01:08:23 2012
10084 NSEQ 75
10085 EFFN 3.941345
10086 CKSUM 725606151
10087 STATS LOCAL MSV -7.0112 0.71932
10088 STATS LOCAL VITERBI -7.6002 0.71932
10089 STATS LOCAL FORWARD -3.6299 0.71932
10090 HMM A C G T
10091 m->m m->i m->d i->m i->i d->m d->d
10092 COMPO 1.99178 1.05713 1.03677 1.82326
10093 1.38629 1.38629 1.38629 1.38629
10094 0.03311 4.11763 4.11763 1.46634 0.26236 0.00000 *
10095 1 3.06877 3.76621 0.09936 3.69008 1 - -
10096 1.38629 1.38629 1.38629 1.38629
10097 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10098 2 3.63800 0.10822 3.67835 2.97600 2 - -
10099 1.38629 1.38629 1.38629 1.38629
10100 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10101 3 3.63800 0.10822 3.67835 2.97600 3 - -
10102 1.38629 1.38629 1.38629 1.38629
10103 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10104 4 3.63800 0.10822 3.67835 2.97600 4 - -
10105 1.38629 1.38629 1.38629 1.38629
10106 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10107 5 2.74031 3.44624 0.15224 3.10552 5 - -
10108 1.38629 1.38629 1.38629 1.38629
10109 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10110 6 1.96078 3.15215 0.26363 3.03173 6 - -
10111 1.38629 1.38629 1.38629 1.38629
10112 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10113 7 0.13630 3.49554 2.74789 3.41053 7 - -
10114 1.38629 1.38629 1.38629 1.38629
10115 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10116 8 3.06877 3.76621 0.09936 3.69008 8 - -
10117 1.38629 1.38629 1.38629 1.38629
10118 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10119 9 3.63800 0.10822 3.67835 2.97600 9 - -
10120 1.38629 1.38629 1.38629 1.38629
10121 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10122 10 3.63800 0.10822 3.67835 2.97600 10 - -
10123 1.38629 1.38629 1.38629 1.38629
10124 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10125 11 1.38932 2.16314 2.00609 0.69060 11 - -
10126 1.38629 1.38629 1.38629 1.38629
10127 0.10050 4.11763 2.53411 1.46634 0.26236 1.09861 0.40547
10128 12 3.06519 2.40438 3.11421 0.20014 12 - -
10129 1.38629 1.38629 1.38629 1.38629
10130 0.03538 4.05250 4.05250 1.46634 0.26236 0.34394 1.23432
10131 13 2.10122 0.84967 1.59245 1.39955 13 - -
10132 1.38629 1.38629 1.38629 1.38629
10133 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10134 14 1.70851 1.97438 2.39563 0.52950 14 - -
10135 1.38629 1.38629 1.38629 1.38629
10136 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10137 15 3.06877 3.76621 0.09936 3.69008 15 - -
10138 1.38629 1.38629 1.38629 1.38629
10139 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10140 16 2.76288 2.58563 0.20594 3.04372 16 - -
10141 1.38629 1.38629 1.38629 1.38629
10142 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10143 17 3.63800 0.10822 3.67835 2.97600 17 - -
10144 1.38629 1.38629 1.38629 1.38629
10145 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10146 18 3.63800 0.10822 3.67835 2.97600 18 - -
10147 1.38629 1.38629 1.38629 1.38629
10148 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10149 19 3.06877 3.76621 0.09936 3.69008 19 - -
10150 1.38629 1.38629 1.38629 1.38629
10151 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10152 20 0.12035 3.55938 2.91733 3.47849 20 - -
10153 1.38629 1.38629 1.38629 1.38629
10154 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10155 21 2.97532 3.27524 0.12788 3.46721 21 - -
10156 1.38629 1.38629 1.38629 1.38629
10157 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10158 22 3.06877 3.76621 0.09936 3.69008 22 - -
10159 1.38629 1.38629 1.38629 1.38629
10160 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10161 23 3.06877 3.76621 0.09936 3.69008 23 - -
10162 1.38629 1.38629 1.38629 1.38629
10163 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10164 24 3.63800 0.10822 3.67835 2.97600 24 - -
10165 1.38629 1.38629 1.38629 1.38629
10166 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10167 25 0.12035 3.55938 2.91733 3.47849 25 - -
10168 1.38629 1.38629 1.38629 1.38629
10169 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10170 26 3.63800 0.10822 3.67835 2.97600 26 - -
10171 1.38629 1.38629 1.38629 1.38629
10172 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10173 27 3.06877 3.76621 0.09936 3.69008 27 - -
10174 1.38629 1.38629 1.38629 1.38629
10175 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10176 28 2.95522 1.98156 3.00992 0.27341 28 - -
10177 1.38629 1.38629 1.38629 1.38629
10178 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10179 29 3.63800 0.10822 3.67835 2.97600 29 - -
10180 1.38629 1.38629 1.38629 1.38629
10181 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10182 30 3.27324 2.71227 3.31420 0.15156 30 - -
10183 1.38629 1.38629 1.38629 1.38629
10184 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10185 31 3.06877 3.76621 0.09936 3.69008 31 - -
10186 1.38629 1.38629 1.38629 1.38629
10187 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10188 32 3.63800 0.10822 3.67835 2.97600 32 - -
10189 1.38629 1.38629 1.38629 1.38629
10190 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10191 33 3.26436 0.19316 3.31889 2.29033 33 - -
10192 1.38629 1.38629 1.38629 1.38629
10193 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10194 34 3.27324 2.71227 3.31420 0.15156 34 - -
10195 1.38629 1.38629 1.38629 1.38629
10196 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10197 35 3.06877 3.76621 0.09936 3.69008 35 - -
10198 1.38629 1.38629 1.38629 1.38629
10199 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10200 36 3.06877 3.76621 0.09936 3.69008 36 - -
10201 1.38629 1.38629 1.38629 1.38629
10202 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10203 37 3.06877 3.76621 0.09936 3.69008 37 - -
10204 1.38629 1.38629 1.38629 1.38629
10205 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10206 38 2.71123 0.21164 3.12806 2.51972 38 - -
10207 1.38629 1.38629 1.38629 1.38629
10208 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10209 39 3.06877 3.76621 0.09936 3.69008 39 - -
10210 1.38629 1.38629 1.38629 1.38629
10211 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10212 40 3.27324 2.71227 3.31420 0.15156 40 - -
10213 1.38629 1.38629 1.38629 1.38629
10214 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10215 41 3.63800 0.10822 3.67835 2.97600 41 - -
10216 1.38629 1.38629 1.38629 1.38629
10217 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10218 42 0.12035 3.55938 2.91733 3.47849 42 - -
10219 1.38629 1.38629 1.38629 1.38629
10220 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10221 43 3.63800 0.10822 3.67835 2.97600 43 - -
10222 1.38629 1.38629 1.38629 1.38629
10223 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10224 44 2.08904 3.23944 0.23189 3.12420 44 - -
10225 1.38629 1.38629 1.38629 1.38629
10226 0.03311 4.11763 4.11763 1.46634 0.26236 1.09861 0.40547
10227 45 3.63800 0.10822 3.67835 2.97600 45 - -
10228 1.38629 1.38629 1.38629 1.38629
10229 0.01669 4.10121 * 1.46634 0.26236 0.00000 *
10230 //
10231 HMMER3/b [3.0 | March 2010]
10232 NAME 3_End_Tracheophyta_58S_end_twentyfive_long
10233 LENG 45
10234 ALPH DNA
10235 RF no
10236 CS no
10237 MAP yes
10238 DATE Sat Feb 18 01:07:40 2012
10239 NSEQ 2
10240 EFFN 2.000000
10241 CKSUM 3506156002
10242 STATS LOCAL MSV -7.5008 0.72748
10243 STATS LOCAL VITERBI -8.1864 0.72748
10244 STATS LOCAL FORWARD -3.4958 0.72748
10245 HMM A C G T
10246 m->m m->i m->d i->m i->i d->m d->d
10247 COMPO 1.52125 1.29579 1.21643 1.55308
10248 1.38629 1.38629 1.38629 1.38629
10249 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
10250 1 0.23862 2.84929 2.43386 2.70756 1 - -
10251 1.38629 1.38629 1.38629 1.38629
10252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10253 2 2.81865 0.23582 2.88868 2.35662 2 - -
10254 1.38629 1.38629 1.38629 1.38629
10255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10256 3 2.81865 0.23582 2.88868 2.35662 3 - -
10257 1.38629 1.38629 1.38629 1.38629
10258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10259 4 2.81865 0.23582 2.88868 2.35662 4 - -
10260 1.38629 1.38629 1.38629 1.38629
10261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10262 5 2.53331 3.02441 0.20344 2.88069 5 - -
10263 1.38629 1.38629 1.38629 1.38629
10264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10265 6 0.23862 2.84929 2.43386 2.70756 6 - -
10266 1.38629 1.38629 1.38629 1.38629
10267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10268 7 0.23862 2.84929 2.43386 2.70756 7 - -
10269 1.38629 1.38629 1.38629 1.38629
10270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10271 8 2.53331 3.02441 0.20344 2.88069 8 - -
10272 1.38629 1.38629 1.38629 1.38629
10273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10274 9 2.81865 0.23582 2.88868 2.35662 9 - -
10275 1.38629 1.38629 1.38629 1.38629
10276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10277 10 2.81865 0.23582 2.88868 2.35662 10 - -
10278 1.38629 1.38629 1.38629 1.38629
10279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10280 11 0.23862 2.84929 2.43386 2.70756 11 - -
10281 1.38629 1.38629 1.38629 1.38629
10282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10283 12 2.57915 2.25909 2.64442 0.28946 12 - -
10284 1.38629 1.38629 1.38629 1.38629
10285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10286 13 2.81865 0.23582 2.88868 2.35662 13 - -
10287 1.38629 1.38629 1.38629 1.38629
10288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10289 14 0.23862 2.84929 2.43386 2.70756 14 - -
10290 1.38629 1.38629 1.38629 1.38629
10291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10292 15 2.53331 3.02441 0.20344 2.88069 15 - -
10293 1.38629 1.38629 1.38629 1.38629
10294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10295 16 2.53331 3.02441 0.20344 2.88069 16 - -
10296 1.38629 1.38629 1.38629 1.38629
10297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10298 17 2.57915 2.25909 2.64442 0.28946 17 - -
10299 1.38629 1.38629 1.38629 1.38629
10300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10301 18 2.81865 0.23582 2.88868 2.35662 18 - -
10302 1.38629 1.38629 1.38629 1.38629
10303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10304 19 2.53331 3.02441 0.20344 2.88069 19 - -
10305 1.38629 1.38629 1.38629 1.38629
10306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10307 20 0.23862 2.84929 2.43386 2.70756 20 - -
10308 1.38629 1.38629 1.38629 1.38629
10309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10310 21 2.53331 3.02441 0.20344 2.88069 21 - -
10311 1.38629 1.38629 1.38629 1.38629
10312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10313 22 2.53331 3.02441 0.20344 2.88069 22 - -
10314 1.38629 1.38629 1.38629 1.38629
10315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10316 23 2.53331 3.02441 0.20344 2.88069 23 - -
10317 1.38629 1.38629 1.38629 1.38629
10318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10319 24 2.81865 0.23582 2.88868 2.35662 24 - -
10320 1.38629 1.38629 1.38629 1.38629
10321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10322 25 0.23862 2.84929 2.43386 2.70756 25 - -
10323 1.38629 1.38629 1.38629 1.38629
10324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10325 26 2.81865 0.23582 2.88868 2.35662 26 - -
10326 1.38629 1.38629 1.38629 1.38629
10327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10328 27 2.53331 3.02441 0.20344 2.88069 27 - -
10329 1.38629 1.38629 1.38629 1.38629
10330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10331 28 2.57915 2.25909 2.64442 0.28946 28 - -
10332 1.38629 1.38629 1.38629 1.38629
10333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10334 29 2.81865 0.23582 2.88868 2.35662 29 - -
10335 1.38629 1.38629 1.38629 1.38629
10336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10337 30 2.57915 2.25909 2.64442 0.28946 30 - -
10338 1.38629 1.38629 1.38629 1.38629
10339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10340 31 2.53331 3.02441 0.20344 2.88069 31 - -
10341 1.38629 1.38629 1.38629 1.38629
10342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10343 32 2.81865 0.23582 2.88868 2.35662 32 - -
10344 1.38629 1.38629 1.38629 1.38629
10345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10346 33 2.57915 2.25909 2.64442 0.28946 33 - -
10347 1.38629 1.38629 1.38629 1.38629
10348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10349 34 2.57915 2.25909 2.64442 0.28946 34 - -
10350 1.38629 1.38629 1.38629 1.38629
10351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10352 35 2.53331 3.02441 0.20344 2.88069 35 - -
10353 1.38629 1.38629 1.38629 1.38629
10354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10355 36 2.53331 3.02441 0.20344 2.88069 36 - -
10356 1.38629 1.38629 1.38629 1.38629
10357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10358 37 2.53331 3.02441 0.20344 2.88069 37 - -
10359 1.38629 1.38629 1.38629 1.38629
10360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10361 38 2.57915 2.25909 2.64442 0.28946 38 - -
10362 1.38629 1.38629 1.38629 1.38629
10363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10364 39 2.53331 3.02441 0.20344 2.88069 39 - -
10365 1.38629 1.38629 1.38629 1.38629
10366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10367 40 2.57915 2.25909 2.64442 0.28946 40 - -
10368 1.38629 1.38629 1.38629 1.38629
10369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10370 41 2.81865 0.23582 2.88868 2.35662 41 - -
10371 1.38629 1.38629 1.38629 1.38629
10372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10373 42 0.23862 2.84929 2.43386 2.70756 42 - -
10374 1.38629 1.38629 1.38629 1.38629
10375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10376 43 2.81865 0.23582 2.88868 2.35662 43 - -
10377 1.38629 1.38629 1.38629 1.38629
10378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10379 44 0.23862 2.84929 2.43386 2.70756 44 - -
10380 1.38629 1.38629 1.38629 1.38629
10381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
10382 45 2.57915 2.25909 2.64442 0.28946 45 - -
10383 1.38629 1.38629 1.38629 1.38629
10384 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
10385 //
10386 HMMER3/b [3.0 | March 2010]
10387 NAME 3_End_Tracheophyta_58S_end_twentyfour_long
10388 LENG 45
10389 ALPH DNA
10390 RF no
10391 CS no
10392 MAP yes
10393 DATE Sat Feb 18 01:07:23 2012
10394 NSEQ 54
10395 EFFN 4.030884
10396 CKSUM 1457287590
10397 STATS LOCAL MSV -7.1491 0.71932
10398 STATS LOCAL VITERBI -7.6747 0.71932
10399 STATS LOCAL FORWARD -3.4488 0.71932
10400 HMM A C G T
10401 m->m m->i m->d i->m i->i d->m d->d
10402 COMPO 2.04535 1.11942 0.98371 1.77033
10403 1.38629 1.38629 1.38629 1.38629
10404 0.03262 4.13210 4.13210 1.46634 0.26236 0.00000 *
10405 1 3.08392 3.78870 0.09735 3.71506 1 - -
10406 1.38629 1.38629 1.38629 1.38629
10407 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10408 2 3.45031 0.14947 3.49811 2.56596 2 - -
10409 1.38629 1.38629 1.38629 1.38629
10410 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10411 3 3.08392 3.78870 0.09735 3.71506 3 - -
10412 1.38629 1.38629 1.38629 1.38629
10413 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10414 4 3.66410 0.10573 3.70323 2.99446 4 - -
10415 1.38629 1.38629 1.38629 1.38629
10416 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10417 5 3.66410 0.10573 3.70323 2.99446 5 - -
10418 1.38629 1.38629 1.38629 1.38629
10419 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10420 6 3.66410 0.10573 3.70323 2.99446 6 - -
10421 1.38629 1.38629 1.38629 1.38629
10422 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10423 7 3.08392 3.78870 0.09735 3.71506 7 - -
10424 1.38629 1.38629 1.38629 1.38629
10425 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10426 8 0.13796 3.50238 2.71853 3.41818 8 - -
10427 1.38629 1.38629 1.38629 1.38629
10428 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10429 9 3.08392 3.78870 0.09735 3.71506 9 - -
10430 1.38629 1.38629 1.38629 1.38629
10431 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10432 10 3.08392 3.78870 0.09735 3.71506 10 - -
10433 1.38629 1.38629 1.38629 1.38629
10434 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10435 11 3.66410 0.10573 3.70323 2.99446 11 - -
10436 1.38629 1.38629 1.38629 1.38629
10437 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10438 12 2.52879 0.85000 2.59963 0.87101 12 - -
10439 1.38629 1.38629 1.38629 1.38629
10440 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10441 13 3.22583 2.53318 3.26898 0.17099 13 - -
10442 1.38629 1.38629 1.38629 1.38629
10443 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10444 14 2.92148 0.32796 2.98592 1.74147 14 - -
10445 1.38629 1.38629 1.38629 1.38629
10446 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10447 15 3.08392 3.78870 0.09735 3.71506 15 - -
10448 1.38629 1.38629 1.38629 1.38629
10449 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10450 16 3.08392 3.78870 0.09735 3.71506 16 - -
10451 1.38629 1.38629 1.38629 1.38629
10452 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10453 17 3.38134 0.16580 3.43180 2.44814 17 - -
10454 1.38629 1.38629 1.38629 1.38629
10455 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10456 18 3.33523 0.17750 3.38738 2.37261 18 - -
10457 1.38629 1.38629 1.38629 1.38629
10458 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10459 19 1.64990 2.96161 0.36060 2.83134 19 - -
10460 1.38629 1.38629 1.38629 1.38629
10461 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10462 20 0.11785 3.58244 2.93213 3.50384 20 - -
10463 1.38629 1.38629 1.38629 1.38629
10464 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10465 21 3.08392 3.78870 0.09735 3.71506 21 - -
10466 1.38629 1.38629 1.38629 1.38629
10467 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10468 22 3.08392 3.78870 0.09735 3.71506 22 - -
10469 1.38629 1.38629 1.38629 1.38629
10470 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10471 23 3.08392 3.78870 0.09735 3.71506 23 - -
10472 1.38629 1.38629 1.38629 1.38629
10473 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10474 24 3.66410 0.10573 3.70323 2.99446 24 - -
10475 1.38629 1.38629 1.38629 1.38629
10476 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10477 25 0.11785 3.58244 2.93213 3.50384 25 - -
10478 1.38629 1.38629 1.38629 1.38629
10479 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10480 26 3.66410 0.10573 3.70323 2.99446 26 - -
10481 1.38629 1.38629 1.38629 1.38629
10482 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10483 27 2.99000 3.28184 0.12599 3.48914 27 - -
10484 1.38629 1.38629 1.38629 1.38629
10485 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10486 28 3.03317 2.09684 3.08495 0.24429 28 - -
10487 1.38629 1.38629 1.38629 1.38629
10488 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10489 29 3.51507 0.13525 3.56027 2.68353 29 - -
10490 1.38629 1.38629 1.38629 1.38629
10491 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10492 30 3.29760 2.72774 3.33760 0.14834 30 - -
10493 1.38629 1.38629 1.38629 1.38629
10494 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10495 31 3.08392 3.78870 0.09735 3.71506 31 - -
10496 1.38629 1.38629 1.38629 1.38629
10497 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10498 32 3.38134 0.16580 3.43180 2.44814 32 - -
10499 1.38629 1.38629 1.38629 1.38629
10500 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10501 33 2.71137 1.47995 2.77533 0.44071 33 - -
10502 1.38629 1.38629 1.38629 1.38629
10503 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10504 34 3.29760 2.72774 3.33760 0.14834 34 - -
10505 1.38629 1.38629 1.38629 1.38629
10506 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10507 35 3.08392 3.78870 0.09735 3.71506 35 - -
10508 1.38629 1.38629 1.38629 1.38629
10509 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10510 36 3.08392 3.78870 0.09735 3.71506 36 - -
10511 1.38629 1.38629 1.38629 1.38629
10512 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10513 37 3.08392 3.78870 0.09735 3.71506 37 - -
10514 1.38629 1.38629 1.38629 1.38629
10515 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10516 38 3.03328 0.27630 3.09490 1.91071 38 - -
10517 1.38629 1.38629 1.38629 1.38629
10518 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10519 39 3.08392 3.78870 0.09735 3.71506 39 - -
10520 1.38629 1.38629 1.38629 1.38629
10521 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10522 40 3.29760 2.72774 3.33760 0.14834 40 - -
10523 1.38629 1.38629 1.38629 1.38629
10524 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10525 41 3.66410 0.10573 3.70323 2.99446 41 - -
10526 1.38629 1.38629 1.38629 1.38629
10527 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10528 42 3.08392 3.78870 0.09735 3.71506 42 - -
10529 1.38629 1.38629 1.38629 1.38629
10530 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10531 43 2.77698 0.33436 2.64739 1.88956 43 - -
10532 1.38629 1.38629 1.38629 1.38629
10533 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10534 44 0.11785 3.58244 2.93213 3.50384 44 - -
10535 1.38629 1.38629 1.38629 1.38629
10536 0.03262 4.13210 4.13210 1.46634 0.26236 1.09861 0.40547
10537 45 2.61157 0.59203 2.68190 1.18763 45 - -
10538 1.38629 1.38629 1.38629 1.38629
10539 0.01645 4.11592 * 1.46634 0.26236 0.00000 *
10540 //
10541 HMMER3/b [3.0 | March 2010]
10542 NAME 3_End_Tracheophyta_58S_end_twentynine_long
10543 LENG 45
10544 ALPH DNA
10545 RF no
10546 CS no
10547 MAP yes
10548 DATE Sat Feb 18 01:08:34 2012
10549 NSEQ 75
10550 EFFN 3.520203
10551 CKSUM 4214802283
10552 STATS LOCAL MSV -7.3205 0.71933
10553 STATS LOCAL VITERBI -7.8616 0.71933
10554 STATS LOCAL FORWARD -3.4501 0.71933
10555 HMM A C G T
10556 m->m m->i m->d i->m i->i d->m d->d
10557 COMPO 1.61407 1.13672 1.12900 1.85344
10558 1.38629 1.38629 1.38629 1.38629
10559 0.03559 4.04659 4.04659 1.46634 0.26236 0.00000 *
10560 1 3.50349 0.12212 3.54991 2.87996 1 - -
10561 1.38629 1.38629 1.38629 1.38629
10562 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10563 2 3.50349 0.12212 3.54991 2.87996 2 - -
10564 1.38629 1.38629 1.38629 1.38629
10565 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10566 3 2.73573 3.53280 0.13493 3.43720 3 - -
10567 1.38629 1.38629 1.38629 1.38629
10568 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10569 4 0.13407 3.44147 2.84153 3.34899 4 - -
10570 1.38629 1.38629 1.38629 1.38629
10571 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10572 5 2.98975 3.64948 0.11062 3.56065 5 - -
10573 1.38629 1.38629 1.38629 1.38629
10574 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10575 6 2.98975 3.64948 0.11062 3.56065 6 - -
10576 1.38629 1.38629 1.38629 1.38629
10577 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10578 7 2.98975 3.64948 0.11062 3.56065 7 - -
10579 1.38629 1.38629 1.38629 1.38629
10580 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10581 8 0.13407 3.44147 2.84153 3.34899 8 - -
10582 1.38629 1.38629 1.38629 1.38629
10583 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10584 9 2.87305 0.31464 2.93828 1.82969 9 - -
10585 1.38629 1.38629 1.38629 1.38629
10586 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10587 10 3.50349 0.12212 3.54991 2.87996 10 - -
10588 1.38629 1.38629 1.38629 1.38629
10589 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10590 11 1.14532 0.98332 2.08943 1.69252 11 - -
10591 1.38629 1.38629 1.38629 1.38629
10592 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10593 12 2.36639 2.27561 1.70310 0.47590 12 - -
10594 1.38629 1.38629 1.38629 1.38629
10595 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10596 13 3.50349 0.12212 3.54991 2.87996 13 - -
10597 1.38629 1.38629 1.38629 1.38629
10598 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10599 14 3.50349 0.12212 3.54991 2.87996 14 - -
10600 1.38629 1.38629 1.38629 1.38629
10601 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10602 15 3.50349 0.12212 3.54991 2.87996 15 - -
10603 1.38629 1.38629 1.38629 1.38629
10604 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10605 16 2.98975 3.64948 0.11062 3.56065 16 - -
10606 1.38629 1.38629 1.38629 1.38629
10607 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10608 17 0.13407 3.44147 2.84153 3.34899 17 - -
10609 1.38629 1.38629 1.38629 1.38629
10610 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10611 18 2.98975 3.64948 0.11062 3.56065 18 - -
10612 1.38629 1.38629 1.38629 1.38629
10613 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10614 19 2.98975 3.64948 0.11062 3.56065 19 - -
10615 1.38629 1.38629 1.38629 1.38629
10616 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10617 20 2.98975 3.64948 0.11062 3.56065 20 - -
10618 1.38629 1.38629 1.38629 1.38629
10619 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10620 21 3.50349 0.12212 3.54991 2.87996 21 - -
10621 1.38629 1.38629 1.38629 1.38629
10622 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10623 22 0.13407 3.44147 2.84153 3.34899 22 - -
10624 1.38629 1.38629 1.38629 1.38629
10625 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10626 23 3.50349 0.12212 3.54991 2.87996 23 - -
10627 1.38629 1.38629 1.38629 1.38629
10628 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10629 24 2.46147 3.38186 0.17088 3.27586 24 - -
10630 1.38629 1.38629 1.38629 1.38629
10631 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10632 25 3.50349 0.12212 3.54991 2.87996 25 - -
10633 1.38629 1.38629 1.38629 1.38629
10634 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10635 26 3.50349 0.12212 3.54991 2.87996 26 - -
10636 1.38629 1.38629 1.38629 1.38629
10637 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10638 27 3.15082 2.63465 3.19658 0.16897 27 - -
10639 1.38629 1.38629 1.38629 1.38629
10640 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10641 28 2.98975 3.64948 0.11062 3.56065 28 - -
10642 1.38629 1.38629 1.38629 1.38629
10643 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10644 29 3.50349 0.12212 3.54991 2.87996 29 - -
10645 1.38629 1.38629 1.38629 1.38629
10646 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10647 30 3.50349 0.12212 3.54991 2.87996 30 - -
10648 1.38629 1.38629 1.38629 1.38629
10649 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10650 31 3.15082 2.63465 3.19658 0.16897 31 - -
10651 1.38629 1.38629 1.38629 1.38629
10652 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10653 32 3.50349 0.12212 3.54991 2.87996 32 - -
10654 1.38629 1.38629 1.38629 1.38629
10655 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10656 33 0.28595 2.82529 2.54517 2.19872 33 - -
10657 1.38629 1.38629 1.38629 1.38629
10658 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10659 34 3.02876 2.33986 3.07919 0.21160 34 - -
10660 1.38629 1.38629 1.38629 1.38629
10661 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10662 35 2.98975 3.64948 0.11062 3.56065 35 - -
10663 1.38629 1.38629 1.38629 1.38629
10664 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10665 36 2.98975 3.64948 0.11062 3.56065 36 - -
10666 1.38629 1.38629 1.38629 1.38629
10667 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10668 37 2.98975 3.64948 0.11062 3.56065 37 - -
10669 1.38629 1.38629 1.38629 1.38629
10670 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10671 38 3.50349 0.12212 3.54991 2.87996 38 - -
10672 1.38629 1.38629 1.38629 1.38629
10673 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10674 39 2.98975 3.64948 0.11062 3.56065 39 - -
10675 1.38629 1.38629 1.38629 1.38629
10676 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10677 40 3.15082 2.63465 3.19658 0.16897 40 - -
10678 1.38629 1.38629 1.38629 1.38629
10679 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10680 41 3.15082 2.63465 3.19658 0.16897 41 - -
10681 1.38629 1.38629 1.38629 1.38629
10682 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10683 42 0.13407 3.44147 2.84153 3.34899 42 - -
10684 1.38629 1.38629 1.38629 1.38629
10685 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10686 43 2.98975 3.64948 0.11062 3.56065 43 - -
10687 1.38629 1.38629 1.38629 1.38629
10688 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10689 44 0.13407 3.44147 2.84153 3.34899 44 - -
10690 1.38629 1.38629 1.38629 1.38629
10691 0.03559 4.04659 4.04659 1.46634 0.26236 1.09861 0.40547
10692 45 0.13407 3.44147 2.84153 3.34899 45 - -
10693 1.38629 1.38629 1.38629 1.38629
10694 0.01795 4.02895 * 1.46634 0.26236 0.00000 *
10695 //
10696 HMMER3/b [3.0 | March 2010]
10697 NAME 3_End_Tracheophyta_58S_end_twentyone_long
10698 LENG 45
10699 ALPH DNA
10700 RF no
10701 CS no
10702 MAP yes
10703 DATE Sat Feb 18 01:03:41 2012
10704 NSEQ 599
10705 EFFN 5.927299
10706 CKSUM 1282541197
10707 STATS LOCAL MSV -6.8074 0.71932
10708 STATS LOCAL VITERBI -7.4983 0.71932
10709 STATS LOCAL FORWARD -3.9068 0.71932
10710 HMM A C G T
10711 m->m m->i m->d i->m i->i d->m d->d
10712 COMPO 1.84517 1.10322 1.09393 1.74124
10713 1.38629 1.38629 1.38629 1.38629
10714 0.02492 4.39781 4.39781 1.46634 0.26236 0.00000 *
10715 1 3.11256 4.08891 0.08199 4.04723 1 - -
10716 1.38629 1.38629 1.38629 1.38629
10717 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10718 2 3.81774 0.11010 3.52105 2.94300 2 - -
10719 1.38629 1.38629 1.38629 1.38629
10720 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10721 3 3.98691 0.09021 4.01203 3.00368 3 - -
10722 1.38629 1.38629 1.38629 1.38629
10723 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10724 4 3.38589 0.15019 3.66582 2.52544 4 - -
10725 1.38629 1.38629 1.38629 1.38629
10726 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10727 5 2.03947 2.89434 0.32975 2.34900 5 - -
10728 1.38629 1.38629 1.38629 1.38629
10729 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10730 6 0.09766 3.90429 2.96151 3.85617 6 - -
10731 1.38629 1.38629 1.38629 1.38629
10732 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10733 7 0.33071 2.80869 1.87991 2.67802 7 - -
10734 1.38629 1.38629 1.38629 1.38629
10735 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10736 8 3.10925 4.03118 0.08877 3.79183 8 - -
10737 1.38629 1.38629 1.38629 1.38629
10738 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10739 9 3.78449 0.11940 3.58445 2.77939 9 - -
10740 1.38629 1.38629 1.38629 1.38629
10741 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10742 10 3.72335 0.09223 3.96663 3.10079 10 - -
10743 1.38629 1.38629 1.38629 1.38629
10744 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10745 11 0.84822 2.26890 2.03445 1.08576 11 - -
10746 1.38629 1.38629 1.38629 1.38629
10747 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10748 12 2.81992 2.18962 3.09378 0.24450 12 - -
10749 1.38629 1.38629 1.38629 1.38629
10750 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10751 13 2.99698 1.64338 2.86722 0.35685 13 - -
10752 1.38629 1.38629 1.38629 1.38629
10753 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10754 14 1.40865 1.26890 2.10752 1.04172 14 - -
10755 1.38629 1.38629 1.38629 1.38629
10756 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10757 15 3.16915 4.10190 0.07882 4.06186 15 - -
10758 1.38629 1.38629 1.38629 1.38629
10759 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10760 16 3.14358 4.09614 0.08023 4.05537 16 - -
10761 1.38629 1.38629 1.38629 1.38629
10762 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10763 17 2.79155 0.43147 2.79190 1.47923 17 - -
10764 1.38629 1.38629 1.38629 1.38629
10765 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10766 18 2.39051 0.74458 2.65229 1.01338 18 - -
10767 1.38629 1.38629 1.38629 1.38629
10768 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10769 19 2.56871 3.83022 0.13378 3.61632 19 - -
10770 1.38629 1.38629 1.38629 1.38629
10771 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10772 20 0.09594 3.87393 3.14889 3.58261 20 - -
10773 1.38629 1.38629 1.38629 1.38629
10774 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10775 21 3.11814 3.67838 0.09316 3.93998 21 - -
10776 1.38629 1.38629 1.38629 1.38629
10777 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10778 22 3.32075 4.13261 0.07128 4.09614 22 - -
10779 1.38629 1.38629 1.38629 1.38629
10780 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10781 23 3.27757 3.64613 0.08626 3.97203 23 - -
10782 1.38629 1.38629 1.38629 1.38629
10783 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10784 24 4.06640 0.07430 4.08665 3.27894 24 - -
10785 1.38629 1.38629 1.38629 1.38629
10786 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10787 25 0.08455 3.95086 3.17582 3.90811 25 - -
10788 1.38629 1.38629 1.38629 1.38629
10789 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10790 26 3.77969 0.09699 3.80767 3.04909 26 - -
10791 1.38629 1.38629 1.38629 1.38629
10792 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10793 27 3.05181 4.07394 0.08561 4.03033 27 - -
10794 1.38629 1.38629 1.38629 1.38629
10795 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10796 28 3.28089 1.82051 3.32900 0.26836 28 - -
10797 1.38629 1.38629 1.38629 1.38629
10798 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10799 29 4.06640 0.07430 4.08665 3.27894 29 - -
10800 1.38629 1.38629 1.38629 1.38629
10801 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10802 30 3.51518 2.93205 3.11370 0.13635 30 - -
10803 1.38629 1.38629 1.38629 1.38629
10804 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10805 31 3.25461 3.97089 0.09364 3.44412 31 - -
10806 1.38629 1.38629 1.38629 1.38629
10807 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10808 32 3.91257 0.09557 3.67161 3.08517 32 - -
10809 1.38629 1.38629 1.38629 1.38629
10810 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10811 33 3.93957 0.09981 3.96755 2.87147 33 - -
10812 1.38629 1.38629 1.38629 1.38629
10813 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10814 34 3.70623 2.99468 3.73046 0.10381 34 - -
10815 1.38629 1.38629 1.38629 1.38629
10816 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10817 35 3.32075 4.13261 0.07128 4.09614 35 - -
10818 1.38629 1.38629 1.38629 1.38629
10819 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10820 36 3.27358 4.01580 0.08725 3.58801 36 - -
10821 1.38629 1.38629 1.38629 1.38629
10822 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10823 37 3.32075 4.13261 0.07128 4.09614 37 - -
10824 1.38629 1.38629 1.38629 1.38629
10825 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10826 38 3.26724 0.28921 3.32491 1.73127 38 - -
10827 1.38629 1.38629 1.38629 1.38629
10828 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10829 39 3.17845 4.10395 0.07832 4.06416 39 - -
10830 1.38629 1.38629 1.38629 1.38629
10831 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10832 40 3.67419 2.86107 3.70040 0.11349 40 - -
10833 1.38629 1.38629 1.38629 1.38629
10834 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10835 41 4.02320 0.08293 4.04609 3.11914 41 - -
10836 1.38629 1.38629 1.38629 1.38629
10837 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10838 42 0.11990 3.74285 2.95937 3.28474 42 - -
10839 1.38629 1.38629 1.38629 1.38629
10840 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10841 43 3.55391 0.10863 3.86661 2.93008 43 - -
10842 1.38629 1.38629 1.38629 1.38629
10843 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10844 44 0.86136 2.72729 0.84837 2.47808 44 - -
10845 1.38629 1.38629 1.38629 1.38629
10846 0.02492 4.39781 4.39781 1.46634 0.26236 1.09861 0.40547
10847 45 3.37898 0.16398 3.61810 2.40435 45 - -
10848 1.38629 1.38629 1.38629 1.38629
10849 0.01254 4.38543 * 1.46634 0.26236 0.00000 *
10850 //
10851 HMMER3/b [3.0 | March 2010]
10852 NAME 3_End_Tracheophyta_58S_end_twentysevena_long
10853 LENG 45
10854 ALPH DNA
10855 RF no
10856 CS no
10857 MAP yes
10858 DATE Sat Feb 18 01:07:57 2012
10859 NSEQ 16
10860 EFFN 3.308594
10861 CKSUM 3310407156
10862 STATS LOCAL MSV -8.2848 0.71933
10863 STATS LOCAL VITERBI -7.9184 0.71933
10864 STATS LOCAL FORWARD -3.7813 0.71933
10865 HMM A C G T
10866 m->m m->i m->d i->m i->i d->m d->d
10867 COMPO 2.17979 1.20305 1.04053 1.45504
10868 1.38629 1.38629 1.38629 1.38629
10869 0.03698 4.00889 4.00889 1.46634 0.26236 0.00000 *
10870 1 3.42790 0.13083 3.47758 2.82520 1 - -
10871 1.38629 1.38629 1.38629 1.38629
10872 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10873 2 2.94437 3.58317 0.11766 3.48736 2 - -
10874 1.38629 1.38629 1.38629 1.38629
10875 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10876 3 3.42790 0.13083 3.47758 2.82520 3 - -
10877 1.38629 1.38629 1.38629 1.38629
10878 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10879 4 3.08405 2.59224 3.13238 0.17941 4 - -
10880 1.38629 1.38629 1.38629 1.38629
10881 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10882 5 3.42790 0.13083 3.47758 2.82520 5 - -
10883 1.38629 1.38629 1.38629 1.38629
10884 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10885 6 2.94437 3.58317 0.11766 3.48736 6 - -
10886 1.38629 1.38629 1.38629 1.38629
10887 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10888 7 0.14249 3.37574 2.79899 3.27698 7 - -
10889 1.38629 1.38629 1.38629 1.38629
10890 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10891 8 2.94437 3.58317 0.11766 3.48736 8 - -
10892 1.38629 1.38629 1.38629 1.38629
10893 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10894 9 2.94437 3.58317 0.11766 3.48736 9 - -
10895 1.38629 1.38629 1.38629 1.38629
10896 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10897 10 3.42790 0.13083 3.47758 2.82520 10 - -
10898 1.38629 1.38629 1.38629 1.38629
10899 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10900 11 1.89641 2.30749 2.51977 0.40062 11 - -
10901 1.38629 1.38629 1.38629 1.38629
10902 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10903 12 2.94437 3.58317 0.11766 3.48736 12 - -
10904 1.38629 1.38629 1.38629 1.38629
10905 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10906 13 2.90666 2.18699 2.96140 0.24674 13 - -
10907 1.38629 1.38629 1.38629 1.38629
10908 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10909 14 2.90666 2.18699 2.96140 0.24674 14 - -
10910 1.38629 1.38629 1.38629 1.38629
10911 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10912 15 0.14249 3.37574 2.79899 3.27698 15 - -
10913 1.38629 1.38629 1.38629 1.38629
10914 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10915 16 2.94437 3.58317 0.11766 3.48736 16 - -
10916 1.38629 1.38629 1.38629 1.38629
10917 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10918 17 3.42790 0.13083 3.47758 2.82520 17 - -
10919 1.38629 1.38629 1.38629 1.38629
10920 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10921 18 3.42790 0.13083 3.47758 2.82520 18 - -
10922 1.38629 1.38629 1.38629 1.38629
10923 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10924 19 2.94437 3.58317 0.11766 3.48736 19 - -
10925 1.38629 1.38629 1.38629 1.38629
10926 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10927 20 0.14249 3.37574 2.79899 3.27698 20 - -
10928 1.38629 1.38629 1.38629 1.38629
10929 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10930 21 2.94437 3.58317 0.11766 3.48736 21 - -
10931 1.38629 1.38629 1.38629 1.38629
10932 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10933 22 2.94437 3.58317 0.11766 3.48736 22 - -
10934 1.38629 1.38629 1.38629 1.38629
10935 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10936 23 2.94437 3.58317 0.11766 3.48736 23 - -
10937 1.38629 1.38629 1.38629 1.38629
10938 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10939 24 3.42790 0.13083 3.47758 2.82520 24 - -
10940 1.38629 1.38629 1.38629 1.38629
10941 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10942 25 2.94437 3.58317 0.11766 3.48736 25 - -
10943 1.38629 1.38629 1.38629 1.38629
10944 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10945 26 3.08405 2.59224 3.13238 0.17941 26 - -
10946 1.38629 1.38629 1.38629 1.38629
10947 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10948 27 2.94437 3.58317 0.11766 3.48736 27 - -
10949 1.38629 1.38629 1.38629 1.38629
10950 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10951 28 3.42790 0.13083 3.47758 2.82520 28 - -
10952 1.38629 1.38629 1.38629 1.38629
10953 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10954 29 3.42790 0.13083 3.47758 2.82520 29 - -
10955 1.38629 1.38629 1.38629 1.38629
10956 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10957 30 3.08405 2.59224 3.13238 0.17941 30 - -
10958 1.38629 1.38629 1.38629 1.38629
10959 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10960 31 2.94437 3.58317 0.11766 3.48736 31 - -
10961 1.38629 1.38629 1.38629 1.38629
10962 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10963 32 3.42790 0.13083 3.47758 2.82520 32 - -
10964 1.38629 1.38629 1.38629 1.38629
10965 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10966 33 3.42790 0.13083 3.47758 2.82520 33 - -
10967 1.38629 1.38629 1.38629 1.38629
10968 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10969 34 3.08405 2.59224 3.13238 0.17941 34 - -
10970 1.38629 1.38629 1.38629 1.38629
10971 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10972 35 2.94437 3.58317 0.11766 3.48736 35 - -
10973 1.38629 1.38629 1.38629 1.38629
10974 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10975 36 2.94437 3.58317 0.11766 3.48736 36 - -
10976 1.38629 1.38629 1.38629 1.38629
10977 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10978 37 2.94437 3.58317 0.11766 3.48736 37 - -
10979 1.38629 1.38629 1.38629 1.38629
10980 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10981 38 3.42790 0.13083 3.47758 2.82520 38 - -
10982 1.38629 1.38629 1.38629 1.38629
10983 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10984 39 2.94437 3.58317 0.11766 3.48736 39 - -
10985 1.38629 1.38629 1.38629 1.38629
10986 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10987 40 3.08405 2.59224 3.13238 0.17941 40 - -
10988 1.38629 1.38629 1.38629 1.38629
10989 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10990 41 3.42790 0.13083 3.47758 2.82520 41 - -
10991 1.38629 1.38629 1.38629 1.38629
10992 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10993 42 3.08405 2.59224 3.13238 0.17941 42 - -
10994 1.38629 1.38629 1.38629 1.38629
10995 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10996 43 3.08405 2.59224 3.13238 0.17941 43 - -
10997 1.38629 1.38629 1.38629 1.38629
10998 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
10999 44 3.08405 2.59224 3.13238 0.17941 44 - -
11000 1.38629 1.38629 1.38629 1.38629
11001 0.03698 4.00889 4.00889 1.46634 0.26236 1.09861 0.40547
11002 45 2.96271 0.26173 3.02575 2.03961 45 - -
11003 1.38629 1.38629 1.38629 1.38629
11004 0.01866 3.99057 * 1.46634 0.26236 0.00000 *
11005 //
11006 HMMER3/b [3.0 | March 2010]
11007 NAME 3_End_Tracheophyta_58S_end_twentysevenb_long
11008 LENG 45
11009 ALPH DNA
11010 RF no
11011 CS no
11012 MAP yes
11013 DATE Sat Feb 18 01:08:03 2012
11014 NSEQ 5
11015 EFFN 3.071289
11016 CKSUM 2888586029
11017 STATS LOCAL MSV -8.1248 0.71931
11018 STATS LOCAL VITERBI -7.8960 0.71931
11019 STATS LOCAL FORWARD -3.7218 0.71931
11020 HMM A C G T
11021 m->m m->i m->d i->m i->i d->m d->d
11022 COMPO 1.54970 1.27953 1.04201 1.85294
11023 1.38629 1.38629 1.38629 1.38629
11024 0.03868 3.96486 3.96486 1.46634 0.26236 0.00000 *
11025 1 3.33613 0.14240 3.38959 2.75784 1 - -
11026 1.38629 1.38629 1.38629 1.38629
11027 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11028 2 2.88802 3.50187 0.12701 3.39782 2 - -
11029 1.38629 1.38629 1.38629 1.38629
11030 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11031 3 3.33613 0.14240 3.38959 2.75784 3 - -
11032 1.38629 1.38629 1.38629 1.38629
11033 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11034 4 3.33613 0.14240 3.38959 2.75784 4 - -
11035 1.38629 1.38629 1.38629 1.38629
11036 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11037 5 3.33613 0.14240 3.38959 2.75784 5 - -
11038 1.38629 1.38629 1.38629 1.38629
11039 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11040 6 2.88802 3.50187 0.12701 3.39782 6 - -
11041 1.38629 1.38629 1.38629 1.38629
11042 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11043 7 0.15351 3.29630 2.74702 3.19015 7 - -
11044 1.38629 1.38629 1.38629 1.38629
11045 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11046 8 2.88802 3.50187 0.12701 3.39782 8 - -
11047 1.38629 1.38629 1.38629 1.38629
11048 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11049 9 2.88802 3.50187 0.12701 3.39782 9 - -
11050 1.38629 1.38629 1.38629 1.38629
11051 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11052 10 0.15351 3.29630 2.74702 3.19015 10 - -
11053 1.38629 1.38629 1.38629 1.38629
11054 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11055 11 3.00463 2.54156 3.05596 0.19283 11 - -
11056 1.38629 1.38629 1.38629 1.38629
11057 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11058 12 2.88802 3.50187 0.12701 3.39782 12 - -
11059 1.38629 1.38629 1.38629 1.38629
11060 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11061 13 3.33613 0.14240 3.38959 2.75784 13 - -
11062 1.38629 1.38629 1.38629 1.38629
11063 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11064 14 0.15351 3.29630 2.74702 3.19015 14 - -
11065 1.38629 1.38629 1.38629 1.38629
11066 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11067 15 0.15351 3.29630 2.74702 3.19015 15 - -
11068 1.38629 1.38629 1.38629 1.38629
11069 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11070 16 2.88802 3.50187 0.12701 3.39782 16 - -
11071 1.38629 1.38629 1.38629 1.38629
11072 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11073 17 3.33613 0.14240 3.38959 2.75784 17 - -
11074 1.38629 1.38629 1.38629 1.38629
11075 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11076 18 3.33613 0.14240 3.38959 2.75784 18 - -
11077 1.38629 1.38629 1.38629 1.38629
11078 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11079 19 2.88802 3.50187 0.12701 3.39782 19 - -
11080 1.38629 1.38629 1.38629 1.38629
11081 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11082 20 0.15351 3.29630 2.74702 3.19015 20 - -
11083 1.38629 1.38629 1.38629 1.38629
11084 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11085 21 2.88802 3.50187 0.12701 3.39782 21 - -
11086 1.38629 1.38629 1.38629 1.38629
11087 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11088 22 2.88802 3.50187 0.12701 3.39782 22 - -
11089 1.38629 1.38629 1.38629 1.38629
11090 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11091 23 2.88802 3.50187 0.12701 3.39782 23 - -
11092 1.38629 1.38629 1.38629 1.38629
11093 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11094 24 3.33613 0.14240 3.38959 2.75784 24 - -
11095 1.38629 1.38629 1.38629 1.38629
11096 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11097 25 0.15351 3.29630 2.74702 3.19015 25 - -
11098 1.38629 1.38629 1.38629 1.38629
11099 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11100 26 3.33613 0.14240 3.38959 2.75784 26 - -
11101 1.38629 1.38629 1.38629 1.38629
11102 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11103 27 2.88802 3.50187 0.12701 3.39782 27 - -
11104 1.38629 1.38629 1.38629 1.38629
11105 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11106 28 3.33613 0.14240 3.38959 2.75784 28 - -
11107 1.38629 1.38629 1.38629 1.38629
11108 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11109 29 3.33613 0.14240 3.38959 2.75784 29 - -
11110 1.38629 1.38629 1.38629 1.38629
11111 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11112 30 3.00463 2.54156 3.05596 0.19283 30 - -
11113 1.38629 1.38629 1.38629 1.38629
11114 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11115 31 2.88802 3.50187 0.12701 3.39782 31 - -
11116 1.38629 1.38629 1.38629 1.38629
11117 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11118 32 3.33613 0.14240 3.38959 2.75784 32 - -
11119 1.38629 1.38629 1.38629 1.38629
11120 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11121 33 0.15351 3.29630 2.74702 3.19015 33 - -
11122 1.38629 1.38629 1.38629 1.38629
11123 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11124 34 3.00463 2.54156 3.05596 0.19283 34 - -
11125 1.38629 1.38629 1.38629 1.38629
11126 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11127 35 2.88802 3.50187 0.12701 3.39782 35 - -
11128 1.38629 1.38629 1.38629 1.38629
11129 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11130 36 2.88802 3.50187 0.12701 3.39782 36 - -
11131 1.38629 1.38629 1.38629 1.38629
11132 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11133 37 2.88802 3.50187 0.12701 3.39782 37 - -
11134 1.38629 1.38629 1.38629 1.38629
11135 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11136 38 3.00463 2.54156 3.05596 0.19283 38 - -
11137 1.38629 1.38629 1.38629 1.38629
11138 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11139 39 2.88802 3.50187 0.12701 3.39782 39 - -
11140 1.38629 1.38629 1.38629 1.38629
11141 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11142 40 3.00463 2.54156 3.05596 0.19283 40 - -
11143 1.38629 1.38629 1.38629 1.38629
11144 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11145 41 0.15351 3.29630 2.74702 3.19015 41 - -
11146 1.38629 1.38629 1.38629 1.38629
11147 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11148 42 0.15351 3.29630 2.74702 3.19015 42 - -
11149 1.38629 1.38629 1.38629 1.38629
11150 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11151 43 3.00463 2.54156 3.05596 0.19283 43 - -
11152 1.38629 1.38629 1.38629 1.38629
11153 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11154 44 2.88802 3.50187 0.12701 3.39782 44 - -
11155 1.38629 1.38629 1.38629 1.38629
11156 0.03868 3.96486 3.96486 1.46634 0.26236 1.09861 0.40547
11157 45 3.33613 0.14240 3.38959 2.75784 45 - -
11158 1.38629 1.38629 1.38629 1.38629
11159 0.01953 3.94571 * 1.46634 0.26236 0.00000 *
11160 //
11161 HMMER3/b [3.0 | March 2010]
11162 NAME 3_End_Tracheophyta_58S_end_twentysevenc_long
11163 LENG 45
11164 ALPH DNA
11165 RF no
11166 CS no
11167 MAP yes
11168 DATE Sat Feb 18 01:08:11 2012
11169 NSEQ 6
11170 EFFN 3.102539
11171 CKSUM 2734064390
11172 STATS LOCAL MSV -8.2115 0.71931
11173 STATS LOCAL VITERBI -7.8157 0.71931
11174 STATS LOCAL FORWARD -3.5385 0.71931
11175 HMM A C G T
11176 m->m m->i m->d i->m i->i d->m d->d
11177 COMPO 1.71970 1.27293 1.04361 1.66765
11178 1.38629 1.38629 1.38629 1.38629
11179 0.03845 3.97077 3.97077 1.46634 0.26236 0.00000 *
11180 1 3.34866 0.14075 3.40161 2.76709 1 - -
11181 1.38629 1.38629 1.38629 1.38629
11182 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11183 2 2.89580 3.51302 0.12568 3.41008 2 - -
11184 1.38629 1.38629 1.38629 1.38629
11185 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11186 3 3.34866 0.14075 3.40161 2.76709 3 - -
11187 1.38629 1.38629 1.38629 1.38629
11188 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11189 4 3.34866 0.14075 3.40161 2.76709 4 - -
11190 1.38629 1.38629 1.38629 1.38629
11191 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11192 5 3.34866 0.14075 3.40161 2.76709 5 - -
11193 1.38629 1.38629 1.38629 1.38629
11194 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11195 6 0.15195 3.30713 2.75414 3.20197 6 - -
11196 1.38629 1.38629 1.38629 1.38629
11197 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11198 7 0.15195 3.30713 2.75414 3.20197 7 - -
11199 1.38629 1.38629 1.38629 1.38629
11200 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11201 8 2.89580 3.51302 0.12568 3.41008 8 - -
11202 1.38629 1.38629 1.38629 1.38629
11203 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11204 9 2.89580 3.51302 0.12568 3.41008 9 - -
11205 1.38629 1.38629 1.38629 1.38629
11206 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11207 10 3.01538 2.54843 3.06630 0.19095 10 - -
11208 1.38629 1.38629 1.38629 1.38629
11209 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11210 11 3.01538 2.54843 3.06630 0.19095 11 - -
11211 1.38629 1.38629 1.38629 1.38629
11212 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11213 12 2.89580 3.51302 0.12568 3.41008 12 - -
11214 1.38629 1.38629 1.38629 1.38629
11215 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11216 13 3.34866 0.14075 3.40161 2.76709 13 - -
11217 1.38629 1.38629 1.38629 1.38629
11218 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11219 14 0.15195 3.30713 2.75414 3.20197 14 - -
11220 1.38629 1.38629 1.38629 1.38629
11221 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11222 15 3.34866 0.14075 3.40161 2.76709 15 - -
11223 1.38629 1.38629 1.38629 1.38629
11224 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11225 16 2.89580 3.51302 0.12568 3.41008 16 - -
11226 1.38629 1.38629 1.38629 1.38629
11227 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11228 17 3.34866 0.14075 3.40161 2.76709 17 - -
11229 1.38629 1.38629 1.38629 1.38629
11230 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11231 18 3.34866 0.14075 3.40161 2.76709 18 - -
11232 1.38629 1.38629 1.38629 1.38629
11233 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11234 19 2.89580 3.51302 0.12568 3.41008 19 - -
11235 1.38629 1.38629 1.38629 1.38629
11236 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11237 20 0.15195 3.30713 2.75414 3.20197 20 - -
11238 1.38629 1.38629 1.38629 1.38629
11239 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11240 21 2.89580 3.51302 0.12568 3.41008 21 - -
11241 1.38629 1.38629 1.38629 1.38629
11242 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11243 22 2.89580 3.51302 0.12568 3.41008 22 - -
11244 1.38629 1.38629 1.38629 1.38629
11245 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11246 23 2.89580 3.51302 0.12568 3.41008 23 - -
11247 1.38629 1.38629 1.38629 1.38629
11248 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11249 24 3.34866 0.14075 3.40161 2.76709 24 - -
11250 1.38629 1.38629 1.38629 1.38629
11251 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11252 25 0.15195 3.30713 2.75414 3.20197 25 - -
11253 1.38629 1.38629 1.38629 1.38629
11254 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11255 26 3.34866 0.14075 3.40161 2.76709 26 - -
11256 1.38629 1.38629 1.38629 1.38629
11257 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11258 27 2.89580 3.51302 0.12568 3.41008 27 - -
11259 1.38629 1.38629 1.38629 1.38629
11260 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11261 28 3.01538 2.54843 3.06630 0.19095 28 - -
11262 1.38629 1.38629 1.38629 1.38629
11263 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11264 29 3.34866 0.14075 3.40161 2.76709 29 - -
11265 1.38629 1.38629 1.38629 1.38629
11266 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11267 30 3.01538 2.54843 3.06630 0.19095 30 - -
11268 1.38629 1.38629 1.38629 1.38629
11269 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11270 31 2.89580 3.51302 0.12568 3.41008 31 - -
11271 1.38629 1.38629 1.38629 1.38629
11272 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11273 32 3.34866 0.14075 3.40161 2.76709 32 - -
11274 1.38629 1.38629 1.38629 1.38629
11275 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11276 33 0.15195 3.30713 2.75414 3.20197 33 - -
11277 1.38629 1.38629 1.38629 1.38629
11278 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11279 34 3.01538 2.54843 3.06630 0.19095 34 - -
11280 1.38629 1.38629 1.38629 1.38629
11281 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11282 35 2.89580 3.51302 0.12568 3.41008 35 - -
11283 1.38629 1.38629 1.38629 1.38629
11284 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11285 36 2.89580 3.51302 0.12568 3.41008 36 - -
11286 1.38629 1.38629 1.38629 1.38629
11287 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11288 37 2.89580 3.51302 0.12568 3.41008 37 - -
11289 1.38629 1.38629 1.38629 1.38629
11290 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11291 38 3.01538 2.54843 3.06630 0.19095 38 - -
11292 1.38629 1.38629 1.38629 1.38629
11293 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11294 39 2.89580 3.51302 0.12568 3.41008 39 - -
11295 1.38629 1.38629 1.38629 1.38629
11296 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11297 40 3.01538 2.54843 3.06630 0.19095 40 - -
11298 1.38629 1.38629 1.38629 1.38629
11299 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11300 41 2.89580 3.51302 0.12568 3.41008 41 - -
11301 1.38629 1.38629 1.38629 1.38629
11302 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11303 42 0.15195 3.30713 2.75414 3.20197 42 - -
11304 1.38629 1.38629 1.38629 1.38629
11305 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11306 43 3.01538 2.54843 3.06630 0.19095 43 - -
11307 1.38629 1.38629 1.38629 1.38629
11308 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11309 44 2.89580 3.51302 0.12568 3.41008 44 - -
11310 1.38629 1.38629 1.38629 1.38629
11311 0.03845 3.97077 3.97077 1.46634 0.26236 1.09861 0.40547
11312 45 3.34866 0.14075 3.40161 2.76709 45 - -
11313 1.38629 1.38629 1.38629 1.38629
11314 0.01941 3.95173 * 1.46634 0.26236 0.00000 *
11315 //
11316 HMMER3/b [3.0 | March 2010]
11317 NAME 3_End_Tracheophyta_58S_end_twentythree_long
11318 LENG 45
11319 ALPH DNA
11320 RF no
11321 CS no
11322 MAP yes
11323 DATE Sat Feb 18 01:07:10 2012
11324 NSEQ 95
11325 EFFN 3.273163
11326 CKSUM 688352655
11327 STATS LOCAL MSV -8.2001 0.71932
11328 STATS LOCAL VITERBI -7.8064 0.71932
11329 STATS LOCAL FORWARD -3.7937 0.71932
11330 HMM A C G T
11331 m->m m->i m->d i->m i->i d->m d->d
11332 COMPO 1.81877 1.14736 1.03868 1.79350
11333 1.38629 1.38629 1.38629 1.38629
11334 0.03723 4.00244 4.00244 1.46634 0.26236 0.00000 *
11335 1 2.93635 3.57151 0.11895 3.47450 1 - -
11336 1.38629 1.38629 1.38629 1.38629
11337 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11338 2 3.41468 0.13243 3.46492 2.81556 2 - -
11339 1.38629 1.38629 1.38629 1.38629
11340 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11341 3 3.41468 0.13243 3.46492 2.81556 3 - -
11342 1.38629 1.38629 1.38629 1.38629
11343 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11344 4 3.41468 0.13243 3.46492 2.81556 4 - -
11345 1.38629 1.38629 1.38629 1.38629
11346 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11347 5 2.93635 3.57151 0.11895 3.47450 5 - -
11348 1.38629 1.38629 1.38629 1.38629
11349 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11350 6 0.14402 3.36428 2.79153 3.26443 6 - -
11351 1.38629 1.38629 1.38629 1.38629
11352 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11353 7 0.14402 3.36428 2.79153 3.26443 7 - -
11354 1.38629 1.38629 1.38629 1.38629
11355 0.04998 4.00244 3.49078 1.46634 0.26236 1.09861 0.40547
11356 8 2.92085 3.54908 0.12148 3.44977 8 - -
11357 1.38629 1.38629 1.38629 1.38629
11358 0.03770 3.99016 3.99016 1.46634 0.26236 0.78800 0.60651
11359 9 3.41468 0.13243 3.46492 2.81556 9 - -
11360 1.38629 1.38629 1.38629 1.38629
11361 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11362 10 3.41468 0.13243 3.46492 2.81556 10 - -
11363 1.38629 1.38629 1.38629 1.38629
11364 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11365 11 0.27430 2.83445 2.53617 2.28302 11 - -
11366 1.38629 1.38629 1.38629 1.38629
11367 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11368 12 3.07250 2.58489 3.12127 0.18129 12 - -
11369 1.38629 1.38629 1.38629 1.38629
11370 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11371 13 1.59713 1.94122 2.26115 0.59827 13 - -
11372 1.38629 1.38629 1.38629 1.38629
11373 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11374 14 3.41468 0.13243 3.46492 2.81556 14 - -
11375 1.38629 1.38629 1.38629 1.38629
11376 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11377 15 2.93635 3.57151 0.11895 3.47450 15 - -
11378 1.38629 1.38629 1.38629 1.38629
11379 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11380 16 2.93635 3.57151 0.11895 3.47450 16 - -
11381 1.38629 1.38629 1.38629 1.38629
11382 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11383 17 3.41468 0.13243 3.46492 2.81556 17 - -
11384 1.38629 1.38629 1.38629 1.38629
11385 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11386 18 3.41468 0.13243 3.46492 2.81556 18 - -
11387 1.38629 1.38629 1.38629 1.38629
11388 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11389 19 2.93635 3.57151 0.11895 3.47450 19 - -
11390 1.38629 1.38629 1.38629 1.38629
11391 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11392 20 0.14402 3.36428 2.79153 3.26443 20 - -
11393 1.38629 1.38629 1.38629 1.38629
11394 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11395 21 2.93635 3.57151 0.11895 3.47450 21 - -
11396 1.38629 1.38629 1.38629 1.38629
11397 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11398 22 2.93635 3.57151 0.11895 3.47450 22 - -
11399 1.38629 1.38629 1.38629 1.38629
11400 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11401 23 2.93635 3.57151 0.11895 3.47450 23 - -
11402 1.38629 1.38629 1.38629 1.38629
11403 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11404 24 3.41468 0.13243 3.46492 2.81556 24 - -
11405 1.38629 1.38629 1.38629 1.38629
11406 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11407 25 0.14402 3.36428 2.79153 3.26443 25 - -
11408 1.38629 1.38629 1.38629 1.38629
11409 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11410 26 3.41468 0.13243 3.46492 2.81556 26 - -
11411 1.38629 1.38629 1.38629 1.38629
11412 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11413 27 2.93635 3.57151 0.11895 3.47450 27 - -
11414 1.38629 1.38629 1.38629 1.38629
11415 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11416 28 3.41468 0.13243 3.46492 2.81556 28 - -
11417 1.38629 1.38629 1.38629 1.38629
11418 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11419 29 3.41468 0.13243 3.46492 2.81556 29 - -
11420 1.38629 1.38629 1.38629 1.38629
11421 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11422 30 3.07250 2.58489 3.12127 0.18129 30 - -
11423 1.38629 1.38629 1.38629 1.38629
11424 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11425 31 2.93635 3.57151 0.11895 3.47450 31 - -
11426 1.38629 1.38629 1.38629 1.38629
11427 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11428 32 3.41468 0.13243 3.46492 2.81556 32 - -
11429 1.38629 1.38629 1.38629 1.38629
11430 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11431 33 3.41468 0.13243 3.46492 2.81556 33 - -
11432 1.38629 1.38629 1.38629 1.38629
11433 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11434 34 3.07250 2.58489 3.12127 0.18129 34 - -
11435 1.38629 1.38629 1.38629 1.38629
11436 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11437 35 2.93635 3.57151 0.11895 3.47450 35 - -
11438 1.38629 1.38629 1.38629 1.38629
11439 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11440 36 2.93635 3.57151 0.11895 3.47450 36 - -
11441 1.38629 1.38629 1.38629 1.38629
11442 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11443 37 2.93635 3.57151 0.11895 3.47450 37 - -
11444 1.38629 1.38629 1.38629 1.38629
11445 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11446 38 2.80462 1.99740 2.86304 0.29211 38 - -
11447 1.38629 1.38629 1.38629 1.38629
11448 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11449 39 2.93635 3.57151 0.11895 3.47450 39 - -
11450 1.38629 1.38629 1.38629 1.38629
11451 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11452 40 3.07250 2.58489 3.12127 0.18129 40 - -
11453 1.38629 1.38629 1.38629 1.38629
11454 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11455 41 3.41468 0.13243 3.46492 2.81556 41 - -
11456 1.38629 1.38629 1.38629 1.38629
11457 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11458 42 2.93635 3.57151 0.11895 3.47450 42 - -
11459 1.38629 1.38629 1.38629 1.38629
11460 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11461 43 3.07250 2.58489 3.12127 0.18129 43 - -
11462 1.38629 1.38629 1.38629 1.38629
11463 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11464 44 2.86288 3.24962 0.14204 3.30981 44 - -
11465 1.38629 1.38629 1.38629 1.38629
11466 0.03723 4.00244 4.00244 1.46634 0.26236 1.09861 0.40547
11467 45 0.14402 3.36428 2.79153 3.26443 45 - -
11468 1.38629 1.38629 1.38629 1.38629
11469 0.01879 3.98400 * 1.46634 0.26236 0.00000 *
11470 //
11471 HMMER3/b [3.0 | March 2010]
11472 NAME 3_End_Tracheophyta_58S_end_twentytwoa_long
11473 LENG 45
11474 ALPH DNA
11475 RF no
11476 CS no
11477 MAP yes
11478 DATE Sat Feb 18 01:03:52 2012
11479 NSEQ 29
11480 EFFN 3.260376
11481 CKSUM 1765464125
11482 STATS LOCAL MSV -8.1194 0.71933
11483 STATS LOCAL VITERBI -7.9339 0.71933
11484 STATS LOCAL FORWARD -3.8106 0.71933
11485 HMM A C G T
11486 m->m m->i m->d i->m i->i d->m d->d
11487 COMPO 2.05609 1.07633 1.09226 1.63094
11488 1.38629 1.38629 1.38629 1.38629
11489 0.03732 4.00010 4.00010 1.46634 0.26236 0.00000 *
11490 1 2.93342 3.56726 0.11943 3.46982 1 - -
11491 1.38629 1.38629 1.38629 1.38629
11492 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11493 2 3.40987 0.13301 3.46030 2.81205 2 - -
11494 1.38629 1.38629 1.38629 1.38629
11495 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11496 3 3.40987 0.13301 3.46030 2.81205 3 - -
11497 1.38629 1.38629 1.38629 1.38629
11498 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11499 4 3.40987 0.13301 3.46030 2.81205 4 - -
11500 1.38629 1.38629 1.38629 1.38629
11501 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11502 5 2.93342 3.56726 0.11943 3.46982 5 - -
11503 1.38629 1.38629 1.38629 1.38629
11504 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11505 6 3.40987 0.13301 3.46030 2.81205 6 - -
11506 1.38629 1.38629 1.38629 1.38629
11507 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11508 7 2.93342 3.56726 0.11943 3.46982 7 - -
11509 1.38629 1.38629 1.38629 1.38629
11510 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11511 8 2.93342 3.56726 0.11943 3.46982 8 - -
11512 1.38629 1.38629 1.38629 1.38629
11513 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11514 9 3.06831 2.58222 3.11724 0.18198 9 - -
11515 1.38629 1.38629 1.38629 1.38629
11516 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11517 10 3.11459 0.20711 3.17359 2.29441 10 - -
11518 1.38629 1.38629 1.38629 1.38629
11519 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11520 11 3.06831 2.58222 3.11724 0.18198 11 - -
11521 1.38629 1.38629 1.38629 1.38629
11522 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11523 12 3.06831 2.58222 3.11724 0.18198 12 - -
11524 1.38629 1.38629 1.38629 1.38629
11525 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11526 13 2.62442 0.44765 2.69452 1.51042 13 - -
11527 1.38629 1.38629 1.38629 1.38629
11528 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11529 14 3.06831 2.58222 3.11724 0.18198 14 - -
11530 1.38629 1.38629 1.38629 1.38629
11531 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11532 15 2.93342 3.56726 0.11943 3.46982 15 - -
11533 1.38629 1.38629 1.38629 1.38629
11534 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11535 16 2.93342 3.56726 0.11943 3.46982 16 - -
11536 1.38629 1.38629 1.38629 1.38629
11537 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11538 17 3.40987 0.13301 3.46030 2.81205 17 - -
11539 1.38629 1.38629 1.38629 1.38629
11540 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11541 18 3.40987 0.13301 3.46030 2.81205 18 - -
11542 1.38629 1.38629 1.38629 1.38629
11543 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11544 19 0.14459 3.36011 2.78881 3.25987 19 - -
11545 1.38629 1.38629 1.38629 1.38629
11546 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11547 20 0.14459 3.36011 2.78881 3.25987 20 - -
11548 1.38629 1.38629 1.38629 1.38629
11549 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11550 21 2.93342 3.56726 0.11943 3.46982 21 - -
11551 1.38629 1.38629 1.38629 1.38629
11552 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11553 22 2.93342 3.56726 0.11943 3.46982 22 - -
11554 1.38629 1.38629 1.38629 1.38629
11555 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11556 23 2.93342 3.56726 0.11943 3.46982 23 - -
11557 1.38629 1.38629 1.38629 1.38629
11558 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11559 24 3.40987 0.13301 3.46030 2.81205 24 - -
11560 1.38629 1.38629 1.38629 1.38629
11561 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11562 25 0.14459 3.36011 2.78881 3.25987 25 - -
11563 1.38629 1.38629 1.38629 1.38629
11564 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11565 26 3.40987 0.13301 3.46030 2.81205 26 - -
11566 1.38629 1.38629 1.38629 1.38629
11567 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11568 27 2.93342 3.56726 0.11943 3.46982 27 - -
11569 1.38629 1.38629 1.38629 1.38629
11570 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11571 28 3.06831 2.58222 3.11724 0.18198 28 - -
11572 1.38629 1.38629 1.38629 1.38629
11573 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11574 29 3.40987 0.13301 3.46030 2.81205 29 - -
11575 1.38629 1.38629 1.38629 1.38629
11576 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11577 30 3.06831 2.58222 3.11724 0.18198 30 - -
11578 1.38629 1.38629 1.38629 1.38629
11579 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11580 31 2.93342 3.56726 0.11943 3.46982 31 - -
11581 1.38629 1.38629 1.38629 1.38629
11582 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11583 32 3.40987 0.13301 3.46030 2.81205 32 - -
11584 1.38629 1.38629 1.38629 1.38629
11585 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11586 33 3.40987 0.13301 3.46030 2.81205 33 - -
11587 1.38629 1.38629 1.38629 1.38629
11588 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11589 34 3.06831 2.58222 3.11724 0.18198 34 - -
11590 1.38629 1.38629 1.38629 1.38629
11591 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11592 35 2.93342 3.56726 0.11943 3.46982 35 - -
11593 1.38629 1.38629 1.38629 1.38629
11594 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11595 36 2.93342 3.56726 0.11943 3.46982 36 - -
11596 1.38629 1.38629 1.38629 1.38629
11597 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11598 37 2.93342 3.56726 0.11943 3.46982 37 - -
11599 1.38629 1.38629 1.38629 1.38629
11600 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11601 38 3.40987 0.13301 3.46030 2.81205 38 - -
11602 1.38629 1.38629 1.38629 1.38629
11603 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11604 39 2.93342 3.56726 0.11943 3.46982 39 - -
11605 1.38629 1.38629 1.38629 1.38629
11606 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11607 40 3.06831 2.58222 3.11724 0.18198 40 - -
11608 1.38629 1.38629 1.38629 1.38629
11609 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11610 41 3.40987 0.13301 3.46030 2.81205 41 - -
11611 1.38629 1.38629 1.38629 1.38629
11612 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11613 42 0.14459 3.36011 2.78881 3.25987 42 - -
11614 1.38629 1.38629 1.38629 1.38629
11615 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11616 43 2.90443 0.28254 2.96888 1.96615 43 - -
11617 1.38629 1.38629 1.38629 1.38629
11618 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11619 44 3.40987 0.13301 3.46030 2.81205 44 - -
11620 1.38629 1.38629 1.38629 1.38629
11621 0.03732 4.00010 4.00010 1.46634 0.26236 1.09861 0.40547
11622 45 2.93342 3.56726 0.11943 3.46982 45 - -
11623 1.38629 1.38629 1.38629 1.38629
11624 0.01883 3.98162 * 1.46634 0.26236 0.00000 *
11625 //
11626 HMMER3/b [3.0 | March 2010]
11627 NAME 3_End_Tracheophyta_58S_end_twentytwob_long
11628 LENG 45
11629 ALPH DNA
11630 RF no
11631 CS no
11632 MAP yes
11633 DATE Sat Feb 18 01:04:01 2012
11634 NSEQ 3
11635 EFFN 3.000000
11636 CKSUM 2537645075
11637 STATS LOCAL MSV -8.1699 0.71983
11638 STATS LOCAL VITERBI -7.8032 0.71983
11639 STATS LOCAL FORWARD -3.6142 0.71983
11640 HMM A C G T
11641 m->m m->i m->d i->m i->i d->m d->d
11642 COMPO 1.92558 1.10604 1.15098 1.57495
11643 1.38629 1.38629 1.38629 1.38629
11644 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
11645 1 2.86982 3.47591 0.13017 3.36931 1 - -
11646 1.38629 1.38629 1.38629 1.38629
11647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11648 2 3.30705 0.14631 3.36166 2.73626 2 - -
11649 1.38629 1.38629 1.38629 1.38629
11650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11651 3 3.30705 0.14631 3.36166 2.73626 3 - -
11652 1.38629 1.38629 1.38629 1.38629
11653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11654 4 2.97980 2.52563 3.03204 0.19727 4 - -
11655 1.38629 1.38629 1.38629 1.38629
11656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11657 5 2.97980 2.52563 3.03204 0.19727 5 - -
11658 1.38629 1.38629 1.38629 1.38629
11659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11660 6 0.15719 3.27118 2.73043 3.16274 6 - -
11661 1.38629 1.38629 1.38629 1.38629
11662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11663 7 2.86982 3.47591 0.13017 3.36931 7 - -
11664 1.38629 1.38629 1.38629 1.38629
11665 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11666 8 2.86982 3.47591 0.13017 3.36931 8 - -
11667 1.38629 1.38629 1.38629 1.38629
11668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11669 9 3.30705 0.14631 3.36166 2.73626 9 - -
11670 1.38629 1.38629 1.38629 1.38629
11671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11672 10 3.30705 0.14631 3.36166 2.73626 10 - -
11673 1.38629 1.38629 1.38629 1.38629
11674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11675 11 2.97980 2.52563 3.03204 0.19727 11 - -
11676 1.38629 1.38629 1.38629 1.38629
11677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11678 12 2.97980 2.52563 3.03204 0.19727 12 - -
11679 1.38629 1.38629 1.38629 1.38629
11680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11681 13 3.30705 0.14631 3.36166 2.73626 13 - -
11682 1.38629 1.38629 1.38629 1.38629
11683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11684 14 2.97980 2.52563 3.03204 0.19727 14 - -
11685 1.38629 1.38629 1.38629 1.38629
11686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11687 15 2.86982 3.47591 0.13017 3.36931 15 - -
11688 1.38629 1.38629 1.38629 1.38629
11689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11690 16 2.86982 3.47591 0.13017 3.36931 16 - -
11691 1.38629 1.38629 1.38629 1.38629
11692 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11693 17 3.30705 0.14631 3.36166 2.73626 17 - -
11694 1.38629 1.38629 1.38629 1.38629
11695 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11696 18 3.30705 0.14631 3.36166 2.73626 18 - -
11697 1.38629 1.38629 1.38629 1.38629
11698 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11699 19 0.15719 3.27118 2.73043 3.16274 19 - -
11700 1.38629 1.38629 1.38629 1.38629
11701 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11702 20 0.15719 3.27118 2.73043 3.16274 20 - -
11703 1.38629 1.38629 1.38629 1.38629
11704 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11705 21 2.86982 3.47591 0.13017 3.36931 21 - -
11706 1.38629 1.38629 1.38629 1.38629
11707 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11708 22 2.86982 3.47591 0.13017 3.36931 22 - -
11709 1.38629 1.38629 1.38629 1.38629
11710 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11711 23 2.86982 3.47591 0.13017 3.36931 23 - -
11712 1.38629 1.38629 1.38629 1.38629
11713 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11714 24 3.30705 0.14631 3.36166 2.73626 24 - -
11715 1.38629 1.38629 1.38629 1.38629
11716 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11717 25 0.15719 3.27118 2.73043 3.16274 25 - -
11718 1.38629 1.38629 1.38629 1.38629
11719 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11720 26 3.30705 0.14631 3.36166 2.73626 26 - -
11721 1.38629 1.38629 1.38629 1.38629
11722 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11723 27 2.86982 3.47591 0.13017 3.36931 27 - -
11724 1.38629 1.38629 1.38629 1.38629
11725 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11726 28 2.97980 2.52563 3.03204 0.19727 28 - -
11727 1.38629 1.38629 1.38629 1.38629
11728 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11729 29 3.30705 0.14631 3.36166 2.73626 29 - -
11730 1.38629 1.38629 1.38629 1.38629
11731 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11732 30 2.97980 2.52563 3.03204 0.19727 30 - -
11733 1.38629 1.38629 1.38629 1.38629
11734 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11735 31 2.86982 3.47591 0.13017 3.36931 31 - -
11736 1.38629 1.38629 1.38629 1.38629
11737 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11738 32 3.30705 0.14631 3.36166 2.73626 32 - -
11739 1.38629 1.38629 1.38629 1.38629
11740 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11741 33 3.30705 0.14631 3.36166 2.73626 33 - -
11742 1.38629 1.38629 1.38629 1.38629
11743 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11744 34 2.97980 2.52563 3.03204 0.19727 34 - -
11745 1.38629 1.38629 1.38629 1.38629
11746 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11747 35 2.86982 3.47591 0.13017 3.36931 35 - -
11748 1.38629 1.38629 1.38629 1.38629
11749 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11750 36 2.86982 3.47591 0.13017 3.36931 36 - -
11751 1.38629 1.38629 1.38629 1.38629
11752 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11753 37 2.86982 3.47591 0.13017 3.36931 37 - -
11754 1.38629 1.38629 1.38629 1.38629
11755 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11756 38 3.30705 0.14631 3.36166 2.73626 38 - -
11757 1.38629 1.38629 1.38629 1.38629
11758 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11759 39 2.86982 3.47591 0.13017 3.36931 39 - -
11760 1.38629 1.38629 1.38629 1.38629
11761 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11762 40 2.97980 2.52563 3.03204 0.19727 40 - -
11763 1.38629 1.38629 1.38629 1.38629
11764 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11765 41 3.30705 0.14631 3.36166 2.73626 41 - -
11766 1.38629 1.38629 1.38629 1.38629
11767 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11768 42 0.15719 3.27118 2.73043 3.16274 42 - -
11769 1.38629 1.38629 1.38629 1.38629
11770 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11771 43 3.30705 0.14631 3.36166 2.73626 43 - -
11772 1.38629 1.38629 1.38629 1.38629
11773 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11774 44 3.30705 0.14631 3.36166 2.73626 44 - -
11775 1.38629 1.38629 1.38629 1.38629
11776 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11777 45 2.86982 3.47591 0.13017 3.36931 45 - -
11778 1.38629 1.38629 1.38629 1.38629
11779 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
11780 //
11781 HMMER3/b [3.0 | March 2010]
11782 NAME 3_End_Tracheophyta_58S_end_twentytwoc_long
11783 LENG 45
11784 ALPH DNA
11785 RF no
11786 CS no
11787 MAP yes
11788 DATE Sat Feb 18 01:04:10 2012
11789 NSEQ 2
11790 EFFN 2.000000
11791 CKSUM 1546457202
11792 STATS LOCAL MSV -7.4416 0.72715
11793 STATS LOCAL VITERBI -8.2310 0.72715
11794 STATS LOCAL FORWARD -2.9315 0.72715
11795 HMM A C G T
11796 m->m m->i m->d i->m i->i d->m d->d
11797 COMPO 1.66948 1.15317 1.17024 1.68346
11798 1.38629 1.38629 1.38629 1.38629
11799 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
11800 1 2.53331 3.02441 0.20344 2.88069 1 - -
11801 1.38629 1.38629 1.38629 1.38629
11802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11803 2 2.81865 0.23582 2.88868 2.35662 2 - -
11804 1.38629 1.38629 1.38629 1.38629
11805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11806 3 2.81865 0.23582 2.88868 2.35662 3 - -
11807 1.38629 1.38629 1.38629 1.38629
11808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11809 4 2.81865 0.23582 2.88868 2.35662 4 - -
11810 1.38629 1.38629 1.38629 1.38629
11811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11812 5 2.53331 3.02441 0.20344 2.88069 5 - -
11813 1.38629 1.38629 1.38629 1.38629
11814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11815 6 0.23862 2.84929 2.43386 2.70756 6 - -
11816 1.38629 1.38629 1.38629 1.38629
11817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11818 7 0.23862 2.84929 2.43386 2.70756 7 - -
11819 1.38629 1.38629 1.38629 1.38629
11820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11821 8 2.53331 3.02441 0.20344 2.88069 8 - -
11822 1.38629 1.38629 1.38629 1.38629
11823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11824 9 2.81865 0.23582 2.88868 2.35662 9 - -
11825 1.38629 1.38629 1.38629 1.38629
11826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11827 10 2.81865 0.23582 2.88868 2.35662 10 - -
11828 1.38629 1.38629 1.38629 1.38629
11829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11830 11 2.57915 2.25909 2.64442 0.28946 11 - -
11831 1.38629 1.38629 1.38629 1.38629
11832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11833 12 2.57915 2.25909 2.64442 0.28946 12 - -
11834 1.38629 1.38629 1.38629 1.38629
11835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11836 13 2.81865 0.23582 2.88868 2.35662 13 - -
11837 1.38629 1.38629 1.38629 1.38629
11838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11839 14 2.53331 3.02441 0.20344 2.88069 14 - -
11840 1.38629 1.38629 1.38629 1.38629
11841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11842 15 2.53331 3.02441 0.20344 2.88069 15 - -
11843 1.38629 1.38629 1.38629 1.38629
11844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11845 16 2.53331 3.02441 0.20344 2.88069 16 - -
11846 1.38629 1.38629 1.38629 1.38629
11847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11848 17 2.81865 0.23582 2.88868 2.35662 17 - -
11849 1.38629 1.38629 1.38629 1.38629
11850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11851 18 2.81865 0.23582 2.88868 2.35662 18 - -
11852 1.38629 1.38629 1.38629 1.38629
11853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11854 19 0.23862 2.84929 2.43386 2.70756 19 - -
11855 1.38629 1.38629 1.38629 1.38629
11856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11857 20 0.23862 2.84929 2.43386 2.70756 20 - -
11858 1.38629 1.38629 1.38629 1.38629
11859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11860 21 2.53331 3.02441 0.20344 2.88069 21 - -
11861 1.38629 1.38629 1.38629 1.38629
11862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11863 22 2.53331 3.02441 0.20344 2.88069 22 - -
11864 1.38629 1.38629 1.38629 1.38629
11865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11866 23 2.53331 3.02441 0.20344 2.88069 23 - -
11867 1.38629 1.38629 1.38629 1.38629
11868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11869 24 2.81865 0.23582 2.88868 2.35662 24 - -
11870 1.38629 1.38629 1.38629 1.38629
11871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11872 25 0.23862 2.84929 2.43386 2.70756 25 - -
11873 1.38629 1.38629 1.38629 1.38629
11874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11875 26 2.81865 0.23582 2.88868 2.35662 26 - -
11876 1.38629 1.38629 1.38629 1.38629
11877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11878 27 2.53331 3.02441 0.20344 2.88069 27 - -
11879 1.38629 1.38629 1.38629 1.38629
11880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11881 28 2.81865 0.23582 2.88868 2.35662 28 - -
11882 1.38629 1.38629 1.38629 1.38629
11883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11884 29 2.57915 2.25909 2.64442 0.28946 29 - -
11885 1.38629 1.38629 1.38629 1.38629
11886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11887 30 2.57915 2.25909 2.64442 0.28946 30 - -
11888 1.38629 1.38629 1.38629 1.38629
11889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11890 31 2.53331 3.02441 0.20344 2.88069 31 - -
11891 1.38629 1.38629 1.38629 1.38629
11892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11893 32 2.81865 0.23582 2.88868 2.35662 32 - -
11894 1.38629 1.38629 1.38629 1.38629
11895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11896 33 2.81865 0.23582 2.88868 2.35662 33 - -
11897 1.38629 1.38629 1.38629 1.38629
11898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11899 34 2.57915 2.25909 2.64442 0.28946 34 - -
11900 1.38629 1.38629 1.38629 1.38629
11901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11902 35 0.23862 2.84929 2.43386 2.70756 35 - -
11903 1.38629 1.38629 1.38629 1.38629
11904 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11905 36 2.53331 3.02441 0.20344 2.88069 36 - -
11906 1.38629 1.38629 1.38629 1.38629
11907 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11908 37 2.53331 3.02441 0.20344 2.88069 37 - -
11909 1.38629 1.38629 1.38629 1.38629
11910 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11911 38 2.57915 2.25909 2.64442 0.28946 38 - -
11912 1.38629 1.38629 1.38629 1.38629
11913 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11914 39 2.53331 3.02441 0.20344 2.88069 39 - -
11915 1.38629 1.38629 1.38629 1.38629
11916 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11917 40 2.57915 2.25909 2.64442 0.28946 40 - -
11918 1.38629 1.38629 1.38629 1.38629
11919 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11920 41 2.81865 0.23582 2.88868 2.35662 41 - -
11921 1.38629 1.38629 1.38629 1.38629
11922 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11923 42 0.23862 2.84929 2.43386 2.70756 42 - -
11924 1.38629 1.38629 1.38629 1.38629
11925 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11926 43 2.81865 0.23582 2.88868 2.35662 43 - -
11927 1.38629 1.38629 1.38629 1.38629
11928 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11929 44 2.53331 3.02441 0.20344 2.88069 44 - -
11930 1.38629 1.38629 1.38629 1.38629
11931 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
11932 45 2.81865 0.23582 2.88868 2.35662 45 - -
11933 1.38629 1.38629 1.38629 1.38629
11934 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
11935 //
11936 HMMER3/b [3.0 | March 2010]
11937 NAME 3_End_Tracheophyta_58S_end_twentytwod_long
11938 LENG 45
11939 ALPH DNA
11940 RF no
11941 CS no
11942 MAP yes
11943 DATE Sat Feb 18 01:04:17 2012
11944 NSEQ 3
11945 EFFN 3.000000
11946 CKSUM 3142111401
11947 STATS LOCAL MSV -8.1951 0.71984
11948 STATS LOCAL VITERBI -7.8511 0.71984
11949 STATS LOCAL FORWARD -3.4557 0.71984
11950 HMM A C G T
11951 m->m m->i m->d i->m i->i d->m d->d
11952 COMPO 1.63362 1.16016 1.20167 1.65731
11953 1.38629 1.38629 1.38629 1.38629
11954 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
11955 1 2.86982 3.47591 0.13017 3.36931 1 - -
11956 1.38629 1.38629 1.38629 1.38629
11957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11958 2 3.30705 0.14631 3.36166 2.73626 2 - -
11959 1.38629 1.38629 1.38629 1.38629
11960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11961 3 3.30705 0.14631 3.36166 2.73626 3 - -
11962 1.38629 1.38629 1.38629 1.38629
11963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11964 4 3.30705 0.14631 3.36166 2.73626 4 - -
11965 1.38629 1.38629 1.38629 1.38629
11966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11967 5 2.97980 2.52563 3.03204 0.19727 5 - -
11968 1.38629 1.38629 1.38629 1.38629
11969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11970 6 0.15719 3.27118 2.73043 3.16274 6 - -
11971 1.38629 1.38629 1.38629 1.38629
11972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11973 7 2.86982 3.47591 0.13017 3.36931 7 - -
11974 1.38629 1.38629 1.38629 1.38629
11975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11976 8 2.86982 3.47591 0.13017 3.36931 8 - -
11977 1.38629 1.38629 1.38629 1.38629
11978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11979 9 3.30705 0.14631 3.36166 2.73626 9 - -
11980 1.38629 1.38629 1.38629 1.38629
11981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11982 10 3.30705 0.14631 3.36166 2.73626 10 - -
11983 1.38629 1.38629 1.38629 1.38629
11984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11985 11 0.15719 3.27118 2.73043 3.16274 11 - -
11986 1.38629 1.38629 1.38629 1.38629
11987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11988 12 2.97980 2.52563 3.03204 0.19727 12 - -
11989 1.38629 1.38629 1.38629 1.38629
11990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11991 13 2.97980 2.52563 3.03204 0.19727 13 - -
11992 1.38629 1.38629 1.38629 1.38629
11993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11994 14 0.15719 3.27118 2.73043 3.16274 14 - -
11995 1.38629 1.38629 1.38629 1.38629
11996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
11997 15 2.86982 3.47591 0.13017 3.36931 15 - -
11998 1.38629 1.38629 1.38629 1.38629
11999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12000 16 2.86982 3.47591 0.13017 3.36931 16 - -
12001 1.38629 1.38629 1.38629 1.38629
12002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12003 17 3.30705 0.14631 3.36166 2.73626 17 - -
12004 1.38629 1.38629 1.38629 1.38629
12005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12006 18 2.97980 2.52563 3.03204 0.19727 18 - -
12007 1.38629 1.38629 1.38629 1.38629
12008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12009 19 0.15719 3.27118 2.73043 3.16274 19 - -
12010 1.38629 1.38629 1.38629 1.38629
12011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12012 20 0.15719 3.27118 2.73043 3.16274 20 - -
12013 1.38629 1.38629 1.38629 1.38629
12014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12015 21 2.86982 3.47591 0.13017 3.36931 21 - -
12016 1.38629 1.38629 1.38629 1.38629
12017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12018 22 2.86982 3.47591 0.13017 3.36931 22 - -
12019 1.38629 1.38629 1.38629 1.38629
12020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12021 23 2.86982 3.47591 0.13017 3.36931 23 - -
12022 1.38629 1.38629 1.38629 1.38629
12023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12024 24 3.30705 0.14631 3.36166 2.73626 24 - -
12025 1.38629 1.38629 1.38629 1.38629
12026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12027 25 0.15719 3.27118 2.73043 3.16274 25 - -
12028 1.38629 1.38629 1.38629 1.38629
12029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12030 26 3.30705 0.14631 3.36166 2.73626 26 - -
12031 1.38629 1.38629 1.38629 1.38629
12032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12033 27 2.86982 3.47591 0.13017 3.36931 27 - -
12034 1.38629 1.38629 1.38629 1.38629
12035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12036 28 3.30705 0.14631 3.36166 2.73626 28 - -
12037 1.38629 1.38629 1.38629 1.38629
12038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12039 29 3.30705 0.14631 3.36166 2.73626 29 - -
12040 1.38629 1.38629 1.38629 1.38629
12041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12042 30 2.97980 2.52563 3.03204 0.19727 30 - -
12043 1.38629 1.38629 1.38629 1.38629
12044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12045 31 0.15719 3.27118 2.73043 3.16274 31 - -
12046 1.38629 1.38629 1.38629 1.38629
12047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12048 32 3.30705 0.14631 3.36166 2.73626 32 - -
12049 1.38629 1.38629 1.38629 1.38629
12050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12051 33 3.30705 0.14631 3.36166 2.73626 33 - -
12052 1.38629 1.38629 1.38629 1.38629
12053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12054 34 2.97980 2.52563 3.03204 0.19727 34 - -
12055 1.38629 1.38629 1.38629 1.38629
12056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12057 35 2.86982 3.47591 0.13017 3.36931 35 - -
12058 1.38629 1.38629 1.38629 1.38629
12059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12060 36 2.86982 3.47591 0.13017 3.36931 36 - -
12061 1.38629 1.38629 1.38629 1.38629
12062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12063 37 2.86982 3.47591 0.13017 3.36931 37 - -
12064 1.38629 1.38629 1.38629 1.38629
12065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12066 38 3.30705 0.14631 3.36166 2.73626 38 - -
12067 1.38629 1.38629 1.38629 1.38629
12068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12069 39 2.86982 3.47591 0.13017 3.36931 39 - -
12070 1.38629 1.38629 1.38629 1.38629
12071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12072 40 2.97980 2.52563 3.03204 0.19727 40 - -
12073 1.38629 1.38629 1.38629 1.38629
12074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12075 41 3.30705 0.14631 3.36166 2.73626 41 - -
12076 1.38629 1.38629 1.38629 1.38629
12077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12078 42 0.15719 3.27118 2.73043 3.16274 42 - -
12079 1.38629 1.38629 1.38629 1.38629
12080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12081 43 2.97980 2.52563 3.03204 0.19727 43 - -
12082 1.38629 1.38629 1.38629 1.38629
12083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12084 44 2.86982 3.47591 0.13017 3.36931 44 - -
12085 1.38629 1.38629 1.38629 1.38629
12086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12087 45 3.30705 0.14631 3.36166 2.73626 45 - -
12088 1.38629 1.38629 1.38629 1.38629
12089 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
12090 //
12091 HMMER3/b [3.0 | March 2010]
12092 NAME 3_End_Tracheophyta_58S_end_twentytwoe_long
12093 LENG 45
12094 ALPH DNA
12095 RF no
12096 CS no
12097 MAP yes
12098 DATE Sat Feb 18 01:04:32 2012
12099 NSEQ 14
12100 EFFN 3.182129
12101 CKSUM 3263474986
12102 STATS LOCAL MSV -8.2849 0.71931
12103 STATS LOCAL VITERBI -7.9060 0.71931
12104 STATS LOCAL FORWARD -3.3628 0.71931
12105 HMM A C G T
12106 m->m m->i m->d i->m i->i d->m d->d
12107 COMPO 2.04320 1.23915 0.94907 1.64167
12108 1.38629 1.38629 1.38629 1.38629
12109 0.03787 3.98567 3.98567 1.46634 0.26236 0.00000 *
12110 1 2.91511 3.54080 0.12243 3.44065 1 - -
12111 1.38629 1.38629 1.38629 1.38629
12112 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12113 2 3.37995 0.13673 3.43163 2.79013 2 - -
12114 1.38629 1.38629 1.38629 1.38629
12115 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12116 3 3.37995 0.13673 3.43163 2.79013 3 - -
12117 1.38629 1.38629 1.38629 1.38629
12118 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12119 4 3.37995 0.13673 3.43163 2.79013 4 - -
12120 1.38629 1.38629 1.38629 1.38629
12121 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12122 5 2.91511 3.54080 0.12243 3.44065 5 - -
12123 1.38629 1.38629 1.38629 1.38629
12124 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12125 6 0.14813 3.33419 2.77189 3.23153 6 - -
12126 1.38629 1.38629 1.38629 1.38629
12127 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12128 7 2.91511 3.54080 0.12243 3.44065 7 - -
12129 1.38629 1.38629 1.38629 1.38629
12130 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12131 8 2.91511 3.54080 0.12243 3.44065 8 - -
12132 1.38629 1.38629 1.38629 1.38629
12133 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12134 9 3.37995 0.13673 3.43163 2.79013 9 - -
12135 1.38629 1.38629 1.38629 1.38629
12136 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12137 10 2.44259 0.65730 2.51520 1.15845 10 - -
12138 1.38629 1.38629 1.38629 1.38629
12139 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12140 11 3.04234 2.56566 3.09225 0.18632 11 - -
12141 1.38629 1.38629 1.38629 1.38629
12142 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12143 12 3.04234 2.56566 3.09225 0.18632 12 - -
12144 1.38629 1.38629 1.38629 1.38629
12145 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12146 13 2.91511 3.54080 0.12243 3.44065 13 - -
12147 1.38629 1.38629 1.38629 1.38629
12148 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12149 14 3.04234 2.56566 3.09225 0.18632 14 - -
12150 1.38629 1.38629 1.38629 1.38629
12151 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12152 15 2.91511 3.54080 0.12243 3.44065 15 - -
12153 1.38629 1.38629 1.38629 1.38629
12154 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12155 16 2.91511 3.54080 0.12243 3.44065 16 - -
12156 1.38629 1.38629 1.38629 1.38629
12157 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12158 17 3.37995 0.13673 3.43163 2.79013 17 - -
12159 1.38629 1.38629 1.38629 1.38629
12160 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12161 18 3.37995 0.13673 3.43163 2.79013 18 - -
12162 1.38629 1.38629 1.38629 1.38629
12163 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12164 19 2.91511 3.54080 0.12243 3.44065 19 - -
12165 1.38629 1.38629 1.38629 1.38629
12166 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12167 20 0.14813 3.33419 2.77189 3.23153 20 - -
12168 1.38629 1.38629 1.38629 1.38629
12169 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12170 21 2.91511 3.54080 0.12243 3.44065 21 - -
12171 1.38629 1.38629 1.38629 1.38629
12172 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12173 22 2.91511 3.54080 0.12243 3.44065 22 - -
12174 1.38629 1.38629 1.38629 1.38629
12175 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12176 23 2.91511 3.54080 0.12243 3.44065 23 - -
12177 1.38629 1.38629 1.38629 1.38629
12178 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12179 24 3.37995 0.13673 3.43163 2.79013 24 - -
12180 1.38629 1.38629 1.38629 1.38629
12181 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12182 25 0.14813 3.33419 2.77189 3.23153 25 - -
12183 1.38629 1.38629 1.38629 1.38629
12184 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12185 26 3.37995 0.13673 3.43163 2.79013 26 - -
12186 1.38629 1.38629 1.38629 1.38629
12187 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12188 27 2.91511 3.54080 0.12243 3.44065 27 - -
12189 1.38629 1.38629 1.38629 1.38629
12190 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12191 28 3.37995 0.13673 3.43163 2.79013 28 - -
12192 1.38629 1.38629 1.38629 1.38629
12193 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12194 29 3.37995 0.13673 3.43163 2.79013 29 - -
12195 1.38629 1.38629 1.38629 1.38629
12196 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12197 30 3.04234 2.56566 3.09225 0.18632 30 - -
12198 1.38629 1.38629 1.38629 1.38629
12199 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12200 31 2.91511 3.54080 0.12243 3.44065 31 - -
12201 1.38629 1.38629 1.38629 1.38629
12202 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12203 32 3.37995 0.13673 3.43163 2.79013 32 - -
12204 1.38629 1.38629 1.38629 1.38629
12205 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12206 33 3.04234 2.56566 3.09225 0.18632 33 - -
12207 1.38629 1.38629 1.38629 1.38629
12208 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12209 34 3.04234 2.56566 3.09225 0.18632 34 - -
12210 1.38629 1.38629 1.38629 1.38629
12211 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12212 35 2.91511 3.54080 0.12243 3.44065 35 - -
12213 1.38629 1.38629 1.38629 1.38629
12214 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12215 36 2.91511 3.54080 0.12243 3.44065 36 - -
12216 1.38629 1.38629 1.38629 1.38629
12217 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12218 37 2.91511 3.54080 0.12243 3.44065 37 - -
12219 1.38629 1.38629 1.38629 1.38629
12220 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12221 38 3.37995 0.13673 3.43163 2.79013 38 - -
12222 1.38629 1.38629 1.38629 1.38629
12223 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12224 39 2.91511 3.54080 0.12243 3.44065 39 - -
12225 1.38629 1.38629 1.38629 1.38629
12226 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12227 40 3.04234 2.56566 3.09225 0.18632 40 - -
12228 1.38629 1.38629 1.38629 1.38629
12229 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12230 41 3.37995 0.13673 3.43163 2.79013 41 - -
12231 1.38629 1.38629 1.38629 1.38629
12232 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12233 42 0.14813 3.33419 2.77189 3.23153 42 - -
12234 1.38629 1.38629 1.38629 1.38629
12235 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12236 43 3.04234 2.56566 3.09225 0.18632 43 - -
12237 1.38629 1.38629 1.38629 1.38629
12238 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12239 44 2.91511 3.54080 0.12243 3.44065 44 - -
12240 1.38629 1.38629 1.38629 1.38629
12241 0.03787 3.98567 3.98567 1.46634 0.26236 1.09861 0.40547
12242 45 2.91511 3.54080 0.12243 3.44065 45 - -
12243 1.38629 1.38629 1.38629 1.38629
12244 0.01911 3.96691 * 1.46634 0.26236 0.00000 *
12245 //
12246 HMMER3/b [3.0 | March 2010]
12247 NAME 3_End_Tracheophyta_58S_end_twentytwof_long
12248 LENG 45
12249 ALPH DNA
12250 RF no
12251 CS no
12252 MAP yes
12253 DATE Sat Feb 18 01:04:41 2012
12254 NSEQ 6
12255 EFFN 3.219727
12256 CKSUM 3873813818
12257 STATS LOCAL MSV -8.1728 0.71932
12258 STATS LOCAL VITERBI -7.6377 0.71932
12259 STATS LOCAL FORWARD -4.0506 0.71932
12260 HMM A C G T
12261 m->m m->i m->d i->m i->i d->m d->d
12262 COMPO 1.82052 1.38584 1.14282 1.31294
12263 1.38629 1.38629 1.38629 1.38629
12264 0.03760 3.99263 3.99263 1.46634 0.26236 0.00000 *
12265 1 2.92399 3.55362 0.12096 3.45477 1 - -
12266 1.38629 1.38629 1.38629 1.38629
12267 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12268 2 3.39443 0.13492 3.44551 2.80075 2 - -
12269 1.38629 1.38629 1.38629 1.38629
12270 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12271 3 3.39443 0.13492 3.44551 2.80075 3 - -
12272 1.38629 1.38629 1.38629 1.38629
12273 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12274 4 3.05488 2.57367 3.10432 0.18421 4 - -
12275 1.38629 1.38629 1.38629 1.38629
12276 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12277 5 2.92399 3.55362 0.12096 3.45477 5 - -
12278 1.38629 1.38629 1.38629 1.38629
12279 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12280 6 0.14640 3.34673 2.78009 3.24524 6 - -
12281 1.38629 1.38629 1.38629 1.38629
12282 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12283 7 3.05488 2.57367 3.10432 0.18421 7 - -
12284 1.38629 1.38629 1.38629 1.38629
12285 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12286 8 2.92399 3.55362 0.12096 3.45477 8 - -
12287 1.38629 1.38629 1.38629 1.38629
12288 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12289 9 3.39443 0.13492 3.44551 2.80075 9 - -
12290 1.38629 1.38629 1.38629 1.38629
12291 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12292 10 3.39443 0.13492 3.44551 2.80075 10 - -
12293 1.38629 1.38629 1.38629 1.38629
12294 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12295 11 0.14640 3.34673 2.78009 3.24524 11 - -
12296 1.38629 1.38629 1.38629 1.38629
12297 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12298 12 3.05488 2.57367 3.10432 0.18421 12 - -
12299 1.38629 1.38629 1.38629 1.38629
12300 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12301 13 3.05488 2.57367 3.10432 0.18421 13 - -
12302 1.38629 1.38629 1.38629 1.38629
12303 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12304 14 3.05488 2.57367 3.10432 0.18421 14 - -
12305 1.38629 1.38629 1.38629 1.38629
12306 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12307 15 2.92399 3.55362 0.12096 3.45477 15 - -
12308 1.38629 1.38629 1.38629 1.38629
12309 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12310 16 2.92399 3.55362 0.12096 3.45477 16 - -
12311 1.38629 1.38629 1.38629 1.38629
12312 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12313 17 3.05488 2.57367 3.10432 0.18421 17 - -
12314 1.38629 1.38629 1.38629 1.38629
12315 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12316 18 2.92399 3.55362 0.12096 3.45477 18 - -
12317 1.38629 1.38629 1.38629 1.38629
12318 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12319 19 2.92399 3.55362 0.12096 3.45477 19 - -
12320 1.38629 1.38629 1.38629 1.38629
12321 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12322 20 0.14640 3.34673 2.78009 3.24524 20 - -
12323 1.38629 1.38629 1.38629 1.38629
12324 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12325 21 2.92399 3.55362 0.12096 3.45477 21 - -
12326 1.38629 1.38629 1.38629 1.38629
12327 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12328 22 2.92399 3.55362 0.12096 3.45477 22 - -
12329 1.38629 1.38629 1.38629 1.38629
12330 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12331 23 2.92399 3.55362 0.12096 3.45477 23 - -
12332 1.38629 1.38629 1.38629 1.38629
12333 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12334 24 3.39443 0.13492 3.44551 2.80075 24 - -
12335 1.38629 1.38629 1.38629 1.38629
12336 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12337 25 0.14640 3.34673 2.78009 3.24524 25 - -
12338 1.38629 1.38629 1.38629 1.38629
12339 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12340 26 3.39443 0.13492 3.44551 2.80075 26 - -
12341 1.38629 1.38629 1.38629 1.38629
12342 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12343 27 0.14640 3.34673 2.78009 3.24524 27 - -
12344 1.38629 1.38629 1.38629 1.38629
12345 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12346 28 3.05488 2.57367 3.10432 0.18421 28 - -
12347 1.38629 1.38629 1.38629 1.38629
12348 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12349 29 3.39443 0.13492 3.44551 2.80075 29 - -
12350 1.38629 1.38629 1.38629 1.38629
12351 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12352 30 3.05488 2.57367 3.10432 0.18421 30 - -
12353 1.38629 1.38629 1.38629 1.38629
12354 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12355 31 2.92399 3.55362 0.12096 3.45477 31 - -
12356 1.38629 1.38629 1.38629 1.38629
12357 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12358 32 3.39443 0.13492 3.44551 2.80075 32 - -
12359 1.38629 1.38629 1.38629 1.38629
12360 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12361 33 3.39443 0.13492 3.44551 2.80075 33 - -
12362 1.38629 1.38629 1.38629 1.38629
12363 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12364 34 3.05488 2.57367 3.10432 0.18421 34 - -
12365 1.38629 1.38629 1.38629 1.38629
12366 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12367 35 2.92399 3.55362 0.12096 3.45477 35 - -
12368 1.38629 1.38629 1.38629 1.38629
12369 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12370 36 3.05488 2.57367 3.10432 0.18421 36 - -
12371 1.38629 1.38629 1.38629 1.38629
12372 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12373 37 2.92399 3.55362 0.12096 3.45477 37 - -
12374 1.38629 1.38629 1.38629 1.38629
12375 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12376 38 3.05488 2.57367 3.10432 0.18421 38 - -
12377 1.38629 1.38629 1.38629 1.38629
12378 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12379 39 2.92399 3.55362 0.12096 3.45477 39 - -
12380 1.38629 1.38629 1.38629 1.38629
12381 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12382 40 3.05488 2.57367 3.10432 0.18421 40 - -
12383 1.38629 1.38629 1.38629 1.38629
12384 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12385 41 3.39443 0.13492 3.44551 2.80075 41 - -
12386 1.38629 1.38629 1.38629 1.38629
12387 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12388 42 0.14640 3.34673 2.78009 3.24524 42 - -
12389 1.38629 1.38629 1.38629 1.38629
12390 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12391 43 3.39443 0.13492 3.44551 2.80075 43 - -
12392 1.38629 1.38629 1.38629 1.38629
12393 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12394 44 2.92399 3.55362 0.12096 3.45477 44 - -
12395 1.38629 1.38629 1.38629 1.38629
12396 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
12397 45 3.05488 2.57367 3.10432 0.18421 45 - -
12398 1.38629 1.38629 1.38629 1.38629
12399 0.01898 3.97401 * 1.46634 0.26236 0.00000 *
12400 //
12401 HMMER3/b [3.0 | March 2010]
12402 NAME 3_End_Tracheophyta_58S_end_twentytwog_long
12403 LENG 45
12404 ALPH DNA
12405 RF no
12406 CS no
12407 MAP yes
12408 DATE Sat Feb 18 01:04:50 2012
12409 NSEQ 2
12410 EFFN 2.000000
12411 CKSUM 4189612609
12412 STATS LOCAL MSV -7.5585 0.72798
12413 STATS LOCAL VITERBI -8.2493 0.72798
12414 STATS LOCAL FORWARD -3.2939 0.72798
12415 HMM A C G T
12416 m->m m->i m->d i->m i->i d->m d->d
12417 COMPO 1.52018 1.19407 1.24915 1.65237
12418 1.38629 1.38629 1.38629 1.38629
12419 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12420 1 2.53331 3.02441 0.20344 2.88069 1 - -
12421 1.38629 1.38629 1.38629 1.38629
12422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12423 2 2.81865 0.23582 2.88868 2.35662 2 - -
12424 1.38629 1.38629 1.38629 1.38629
12425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12426 3 2.81865 0.23582 2.88868 2.35662 3 - -
12427 1.38629 1.38629 1.38629 1.38629
12428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12429 4 2.81865 0.23582 2.88868 2.35662 4 - -
12430 1.38629 1.38629 1.38629 1.38629
12431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12432 5 0.23862 2.84929 2.43386 2.70756 5 - -
12433 1.38629 1.38629 1.38629 1.38629
12434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12435 6 0.23862 2.84929 2.43386 2.70756 6 - -
12436 1.38629 1.38629 1.38629 1.38629
12437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12438 7 0.23862 2.84929 2.43386 2.70756 7 - -
12439 1.38629 1.38629 1.38629 1.38629
12440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12441 8 2.53331 3.02441 0.20344 2.88069 8 - -
12442 1.38629 1.38629 1.38629 1.38629
12443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12444 9 2.81865 0.23582 2.88868 2.35662 9 - -
12445 1.38629 1.38629 1.38629 1.38629
12446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12447 10 2.81865 0.23582 2.88868 2.35662 10 - -
12448 1.38629 1.38629 1.38629 1.38629
12449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12450 11 0.23862 2.84929 2.43386 2.70756 11 - -
12451 1.38629 1.38629 1.38629 1.38629
12452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12453 12 2.57915 2.25909 2.64442 0.28946 12 - -
12454 1.38629 1.38629 1.38629 1.38629
12455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12456 13 2.57915 2.25909 2.64442 0.28946 13 - -
12457 1.38629 1.38629 1.38629 1.38629
12458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12459 14 0.23862 2.84929 2.43386 2.70756 14 - -
12460 1.38629 1.38629 1.38629 1.38629
12461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12462 15 2.53331 3.02441 0.20344 2.88069 15 - -
12463 1.38629 1.38629 1.38629 1.38629
12464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12465 16 2.53331 3.02441 0.20344 2.88069 16 - -
12466 1.38629 1.38629 1.38629 1.38629
12467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12468 17 2.81865 0.23582 2.88868 2.35662 17 - -
12469 1.38629 1.38629 1.38629 1.38629
12470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12471 18 2.57915 2.25909 2.64442 0.28946 18 - -
12472 1.38629 1.38629 1.38629 1.38629
12473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12474 19 2.53331 3.02441 0.20344 2.88069 19 - -
12475 1.38629 1.38629 1.38629 1.38629
12476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12477 20 0.23862 2.84929 2.43386 2.70756 20 - -
12478 1.38629 1.38629 1.38629 1.38629
12479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12480 21 2.53331 3.02441 0.20344 2.88069 21 - -
12481 1.38629 1.38629 1.38629 1.38629
12482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12483 22 2.53331 3.02441 0.20344 2.88069 22 - -
12484 1.38629 1.38629 1.38629 1.38629
12485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12486 23 2.53331 3.02441 0.20344 2.88069 23 - -
12487 1.38629 1.38629 1.38629 1.38629
12488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12489 24 2.81865 0.23582 2.88868 2.35662 24 - -
12490 1.38629 1.38629 1.38629 1.38629
12491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12492 25 0.23862 2.84929 2.43386 2.70756 25 - -
12493 1.38629 1.38629 1.38629 1.38629
12494 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12495 26 2.81865 0.23582 2.88868 2.35662 26 - -
12496 1.38629 1.38629 1.38629 1.38629
12497 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12498 27 2.53331 3.02441 0.20344 2.88069 27 - -
12499 1.38629 1.38629 1.38629 1.38629
12500 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12501 28 2.81865 0.23582 2.88868 2.35662 28 - -
12502 1.38629 1.38629 1.38629 1.38629
12503 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12504 29 2.81865 0.23582 2.88868 2.35662 29 - -
12505 1.38629 1.38629 1.38629 1.38629
12506 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12507 30 2.57915 2.25909 2.64442 0.28946 30 - -
12508 1.38629 1.38629 1.38629 1.38629
12509 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12510 31 1.89532 1.96405 1.06955 1.00436 31 - -
12511 1.38629 1.38629 1.38629 1.38629
12512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12513 32 2.81865 0.23582 2.88868 2.35662 32 - -
12514 1.38629 1.38629 1.38629 1.38629
12515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12516 33 2.81865 0.23582 2.88868 2.35662 33 - -
12517 1.38629 1.38629 1.38629 1.38629
12518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12519 34 2.57915 2.25909 2.64442 0.28946 34 - -
12520 1.38629 1.38629 1.38629 1.38629
12521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12522 35 2.53331 3.02441 0.20344 2.88069 35 - -
12523 1.38629 1.38629 1.38629 1.38629
12524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12525 36 2.53331 3.02441 0.20344 2.88069 36 - -
12526 1.38629 1.38629 1.38629 1.38629
12527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12528 37 2.53331 3.02441 0.20344 2.88069 37 - -
12529 1.38629 1.38629 1.38629 1.38629
12530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12531 38 2.57915 2.25909 2.64442 0.28946 38 - -
12532 1.38629 1.38629 1.38629 1.38629
12533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12534 39 2.53331 3.02441 0.20344 2.88069 39 - -
12535 1.38629 1.38629 1.38629 1.38629
12536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12537 40 2.57915 2.25909 2.64442 0.28946 40 - -
12538 1.38629 1.38629 1.38629 1.38629
12539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12540 41 2.81865 0.23582 2.88868 2.35662 41 - -
12541 1.38629 1.38629 1.38629 1.38629
12542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12543 42 0.23862 2.84929 2.43386 2.70756 42 - -
12544 1.38629 1.38629 1.38629 1.38629
12545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12546 43 2.81865 0.23582 2.88868 2.35662 43 - -
12547 1.38629 1.38629 1.38629 1.38629
12548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12549 44 0.23862 2.84929 2.43386 2.70756 44 - -
12550 1.38629 1.38629 1.38629 1.38629
12551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12552 45 2.81865 0.23582 2.88868 2.35662 45 - -
12553 1.38629 1.38629 1.38629 1.38629
12554 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12555 //
12556 HMMER3/b [3.0 | March 2010]
12557 NAME 3_End_Tracheophyta_58S_end_twentytwoh_long
12558 LENG 45
12559 ALPH DNA
12560 RF no
12561 CS no
12562 MAP yes
12563 DATE Sat Feb 18 01:05:00 2012
12564 NSEQ 2
12565 EFFN 2.000000
12566 CKSUM 731096773
12567 STATS LOCAL MSV -7.5025 0.72838
12568 STATS LOCAL VITERBI -8.3209 0.72838
12569 STATS LOCAL FORWARD -3.2627 0.72838
12570 HMM A C G T
12571 m->m m->i m->d i->m i->i d->m d->d
12572 COMPO 1.63166 1.32411 1.21084 1.42541
12573 1.38629 1.38629 1.38629 1.38629
12574 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
12575 1 2.53331 3.02441 0.20344 2.88069 1 - -
12576 1.38629 1.38629 1.38629 1.38629
12577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12578 2 1.01448 1.11006 1.95471 1.79419 2 - -
12579 1.38629 1.38629 1.38629 1.38629
12580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12581 3 2.81865 0.23582 2.88868 2.35662 3 - -
12582 1.38629 1.38629 1.38629 1.38629
12583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12584 4 2.81865 0.23582 2.88868 2.35662 4 - -
12585 1.38629 1.38629 1.38629 1.38629
12586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12587 5 0.23862 2.84929 2.43386 2.70756 5 - -
12588 1.38629 1.38629 1.38629 1.38629
12589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12590 6 0.23862 2.84929 2.43386 2.70756 6 - -
12591 1.38629 1.38629 1.38629 1.38629
12592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12593 7 0.23862 2.84929 2.43386 2.70756 7 - -
12594 1.38629 1.38629 1.38629 1.38629
12595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12596 8 2.53331 3.02441 0.20344 2.88069 8 - -
12597 1.38629 1.38629 1.38629 1.38629
12598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12599 9 2.81865 0.23582 2.88868 2.35662 9 - -
12600 1.38629 1.38629 1.38629 1.38629
12601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12602 10 2.81865 0.23582 2.88868 2.35662 10 - -
12603 1.38629 1.38629 1.38629 1.38629
12604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12605 11 2.57915 2.25909 2.64442 0.28946 11 - -
12606 1.38629 1.38629 1.38629 1.38629
12607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12608 12 2.57915 2.25909 2.64442 0.28946 12 - -
12609 1.38629 1.38629 1.38629 1.38629
12610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12611 13 2.57915 2.25909 2.64442 0.28946 13 - -
12612 1.38629 1.38629 1.38629 1.38629
12613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12614 14 2.57915 2.25909 2.64442 0.28946 14 - -
12615 1.38629 1.38629 1.38629 1.38629
12616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12617 15 2.53331 3.02441 0.20344 2.88069 15 - -
12618 1.38629 1.38629 1.38629 1.38629
12619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12620 16 2.53331 3.02441 0.20344 2.88069 16 - -
12621 1.38629 1.38629 1.38629 1.38629
12622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12623 17 2.57915 2.25909 2.64442 0.28946 17 - -
12624 1.38629 1.38629 1.38629 1.38629
12625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12626 18 2.57915 2.25909 2.64442 0.28946 18 - -
12627 1.38629 1.38629 1.38629 1.38629
12628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12629 19 2.53331 3.02441 0.20344 2.88069 19 - -
12630 1.38629 1.38629 1.38629 1.38629
12631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12632 20 0.23862 2.84929 2.43386 2.70756 20 - -
12633 1.38629 1.38629 1.38629 1.38629
12634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12635 21 2.53331 3.02441 0.20344 2.88069 21 - -
12636 1.38629 1.38629 1.38629 1.38629
12637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12638 22 2.53331 3.02441 0.20344 2.88069 22 - -
12639 1.38629 1.38629 1.38629 1.38629
12640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12641 23 2.53331 3.02441 0.20344 2.88069 23 - -
12642 1.38629 1.38629 1.38629 1.38629
12643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12644 24 2.81865 0.23582 2.88868 2.35662 24 - -
12645 1.38629 1.38629 1.38629 1.38629
12646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12647 25 0.23862 2.84929 2.43386 2.70756 25 - -
12648 1.38629 1.38629 1.38629 1.38629
12649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12650 26 2.81865 0.23582 2.88868 2.35662 26 - -
12651 1.38629 1.38629 1.38629 1.38629
12652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12653 27 2.53331 3.02441 0.20344 2.88069 27 - -
12654 1.38629 1.38629 1.38629 1.38629
12655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12656 28 2.57915 2.25909 2.64442 0.28946 28 - -
12657 1.38629 1.38629 1.38629 1.38629
12658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12659 29 2.81865 0.23582 2.88868 2.35662 29 - -
12660 1.38629 1.38629 1.38629 1.38629
12661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12662 30 2.57915 2.25909 2.64442 0.28946 30 - -
12663 1.38629 1.38629 1.38629 1.38629
12664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12665 31 2.53331 3.02441 0.20344 2.88069 31 - -
12666 1.38629 1.38629 1.38629 1.38629
12667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12668 32 2.81865 0.23582 2.88868 2.35662 32 - -
12669 1.38629 1.38629 1.38629 1.38629
12670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12671 33 2.81865 0.23582 2.88868 2.35662 33 - -
12672 1.38629 1.38629 1.38629 1.38629
12673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12674 34 2.57915 2.25909 2.64442 0.28946 34 - -
12675 1.38629 1.38629 1.38629 1.38629
12676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12677 35 2.53331 3.02441 0.20344 2.88069 35 - -
12678 1.38629 1.38629 1.38629 1.38629
12679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12680 36 2.53331 3.02441 0.20344 2.88069 36 - -
12681 1.38629 1.38629 1.38629 1.38629
12682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12683 37 2.53331 3.02441 0.20344 2.88069 37 - -
12684 1.38629 1.38629 1.38629 1.38629
12685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12686 38 2.57915 2.25909 2.64442 0.28946 38 - -
12687 1.38629 1.38629 1.38629 1.38629
12688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12689 39 2.53331 3.02441 0.20344 2.88069 39 - -
12690 1.38629 1.38629 1.38629 1.38629
12691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12692 40 2.57915 2.25909 2.64442 0.28946 40 - -
12693 1.38629 1.38629 1.38629 1.38629
12694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12695 41 2.81865 0.23582 2.88868 2.35662 41 - -
12696 1.38629 1.38629 1.38629 1.38629
12697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12698 42 0.23862 2.84929 2.43386 2.70756 42 - -
12699 1.38629 1.38629 1.38629 1.38629
12700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12701 43 2.81865 0.23582 2.88868 2.35662 43 - -
12702 1.38629 1.38629 1.38629 1.38629
12703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12704 44 0.23862 2.84929 2.43386 2.70756 44 - -
12705 1.38629 1.38629 1.38629 1.38629
12706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
12707 45 2.81865 0.23582 2.88868 2.35662 45 - -
12708 1.38629 1.38629 1.38629 1.38629
12709 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
12710 //
12711 HMMER3/b [3.0 | March 2010]
12712 NAME 3_End_Tracheophyta_58S_end_twentytwoi_long
12713 LENG 45
12714 ALPH DNA
12715 RF no
12716 CS no
12717 MAP yes
12718 DATE Sat Feb 18 01:05:07 2012
12719 NSEQ 3
12720 EFFN 3.000000
12721 CKSUM 367268286
12722 STATS LOCAL MSV -8.1402 0.72004
12723 STATS LOCAL VITERBI -7.7871 0.72004
12724 STATS LOCAL FORWARD -3.9309 0.72004
12725 HMM A C G T
12726 m->m m->i m->d i->m i->i d->m d->d
12727 COMPO 1.62474 1.46447 1.09052 1.44479
12728 1.38629 1.38629 1.38629 1.38629
12729 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
12730 1 2.86982 3.47591 0.13017 3.36931 1 - -
12731 1.38629 1.38629 1.38629 1.38629
12732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12733 2 3.30705 0.14631 3.36166 2.73626 2 - -
12734 1.38629 1.38629 1.38629 1.38629
12735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12736 3 3.30705 0.14631 3.36166 2.73626 3 - -
12737 1.38629 1.38629 1.38629 1.38629
12738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12739 4 2.97980 2.52563 3.03204 0.19727 4 - -
12740 1.38629 1.38629 1.38629 1.38629
12741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12742 5 2.86982 3.47591 0.13017 3.36931 5 - -
12743 1.38629 1.38629 1.38629 1.38629
12744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12745 6 0.15719 3.27118 2.73043 3.16274 6 - -
12746 1.38629 1.38629 1.38629 1.38629
12747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12748 7 0.15719 3.27118 2.73043 3.16274 7 - -
12749 1.38629 1.38629 1.38629 1.38629
12750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12751 8 2.86982 3.47591 0.13017 3.36931 8 - -
12752 1.38629 1.38629 1.38629 1.38629
12753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12754 9 3.30705 0.14631 3.36166 2.73626 9 - -
12755 1.38629 1.38629 1.38629 1.38629
12756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12757 10 3.30705 0.14631 3.36166 2.73626 10 - -
12758 1.38629 1.38629 1.38629 1.38629
12759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12760 11 0.15719 3.27118 2.73043 3.16274 11 - -
12761 1.38629 1.38629 1.38629 1.38629
12762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12763 12 2.97980 2.52563 3.03204 0.19727 12 - -
12764 1.38629 1.38629 1.38629 1.38629
12765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12766 13 0.15719 3.27118 2.73043 3.16274 13 - -
12767 1.38629 1.38629 1.38629 1.38629
12768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12769 14 0.15719 3.27118 2.73043 3.16274 14 - -
12770 1.38629 1.38629 1.38629 1.38629
12771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12772 15 2.86982 3.47591 0.13017 3.36931 15 - -
12773 1.38629 1.38629 1.38629 1.38629
12774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12775 16 2.86982 3.47591 0.13017 3.36931 16 - -
12776 1.38629 1.38629 1.38629 1.38629
12777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12778 17 2.97980 2.52563 3.03204 0.19727 17 - -
12779 1.38629 1.38629 1.38629 1.38629
12780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12781 18 2.97980 2.52563 3.03204 0.19727 18 - -
12782 1.38629 1.38629 1.38629 1.38629
12783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12784 19 2.86982 3.47591 0.13017 3.36931 19 - -
12785 1.38629 1.38629 1.38629 1.38629
12786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12787 20 0.15719 3.27118 2.73043 3.16274 20 - -
12788 1.38629 1.38629 1.38629 1.38629
12789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12790 21 2.86982 3.47591 0.13017 3.36931 21 - -
12791 1.38629 1.38629 1.38629 1.38629
12792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12793 22 2.86982 3.47591 0.13017 3.36931 22 - -
12794 1.38629 1.38629 1.38629 1.38629
12795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12796 23 2.86982 3.47591 0.13017 3.36931 23 - -
12797 1.38629 1.38629 1.38629 1.38629
12798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12799 24 3.30705 0.14631 3.36166 2.73626 24 - -
12800 1.38629 1.38629 1.38629 1.38629
12801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12802 25 0.15719 3.27118 2.73043 3.16274 25 - -
12803 1.38629 1.38629 1.38629 1.38629
12804 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12805 26 3.30705 0.14631 3.36166 2.73626 26 - -
12806 1.38629 1.38629 1.38629 1.38629
12807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12808 27 2.86982 3.47591 0.13017 3.36931 27 - -
12809 1.38629 1.38629 1.38629 1.38629
12810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12811 28 2.97980 2.52563 3.03204 0.19727 28 - -
12812 1.38629 1.38629 1.38629 1.38629
12813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12814 29 2.97980 2.52563 3.03204 0.19727 29 - -
12815 1.38629 1.38629 1.38629 1.38629
12816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12817 30 2.97980 2.52563 3.03204 0.19727 30 - -
12818 1.38629 1.38629 1.38629 1.38629
12819 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12820 31 2.86982 3.47591 0.13017 3.36931 31 - -
12821 1.38629 1.38629 1.38629 1.38629
12822 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12823 32 3.30705 0.14631 3.36166 2.73626 32 - -
12824 1.38629 1.38629 1.38629 1.38629
12825 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12826 33 2.97980 2.52563 3.03204 0.19727 33 - -
12827 1.38629 1.38629 1.38629 1.38629
12828 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12829 34 2.97980 2.52563 3.03204 0.19727 34 - -
12830 1.38629 1.38629 1.38629 1.38629
12831 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12832 35 2.86982 3.47591 0.13017 3.36931 35 - -
12833 1.38629 1.38629 1.38629 1.38629
12834 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12835 36 2.86982 3.47591 0.13017 3.36931 36 - -
12836 1.38629 1.38629 1.38629 1.38629
12837 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12838 37 2.86982 3.47591 0.13017 3.36931 37 - -
12839 1.38629 1.38629 1.38629 1.38629
12840 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12841 38 2.97980 2.52563 3.03204 0.19727 38 - -
12842 1.38629 1.38629 1.38629 1.38629
12843 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12844 39 2.86982 3.47591 0.13017 3.36931 39 - -
12845 1.38629 1.38629 1.38629 1.38629
12846 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12847 40 2.97980 2.52563 3.03204 0.19727 40 - -
12848 1.38629 1.38629 1.38629 1.38629
12849 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12850 41 3.30705 0.14631 3.36166 2.73626 41 - -
12851 1.38629 1.38629 1.38629 1.38629
12852 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12853 42 0.15719 3.27118 2.73043 3.16274 42 - -
12854 1.38629 1.38629 1.38629 1.38629
12855 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12856 43 3.30705 0.14631 3.36166 2.73626 43 - -
12857 1.38629 1.38629 1.38629 1.38629
12858 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12859 44 2.86982 3.47591 0.13017 3.36931 44 - -
12860 1.38629 1.38629 1.38629 1.38629
12861 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
12862 45 3.30705 0.14631 3.36166 2.73626 45 - -
12863 1.38629 1.38629 1.38629 1.38629
12864 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
12865 //
12866 HMMER3/b [3.0 | March 2010]
12867 NAME 3_End_Tracheophyta_58S_end_twentytwoj_long
12868 LENG 45
12869 ALPH DNA
12870 RF no
12871 CS no
12872 MAP yes
12873 DATE Sat Feb 18 01:05:15 2012
12874 NSEQ 5
12875 EFFN 3.364258
12876 CKSUM 36523570
12877 STATS LOCAL MSV -8.1118 0.71932
12878 STATS LOCAL VITERBI -7.5667 0.71932
12879 STATS LOCAL FORWARD -3.6845 0.71932
12880 HMM A C G T
12881 m->m m->i m->d i->m i->i d->m d->d
12882 COMPO 1.81723 1.29833 1.10024 1.46212
12883 1.38629 1.38629 1.38629 1.38629
12884 0.03661 4.01895 4.01895 1.46634 0.26236 0.00000 *
12885 1 2.95673 3.60115 0.11570 3.50722 1 - -
12886 1.38629 1.38629 1.38629 1.38629
12887 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12888 2 3.44834 0.12841 3.49715 2.84007 2 - -
12889 1.38629 1.38629 1.38629 1.38629
12890 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12891 3 3.44834 0.12841 3.49715 2.84007 3 - -
12892 1.38629 1.38629 1.38629 1.38629
12893 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12894 4 3.10197 2.60364 3.14962 0.17654 4 - -
12895 1.38629 1.38629 1.38629 1.38629
12896 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12897 5 2.95673 3.60115 0.11570 3.50722 5 - -
12898 1.38629 1.38629 1.38629 1.38629
12899 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12900 6 3.44834 0.12841 3.49715 2.84007 6 - -
12901 1.38629 1.38629 1.38629 1.38629
12902 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12903 7 0.14016 3.39348 2.81050 3.29640 7 - -
12904 1.38629 1.38629 1.38629 1.38629
12905 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12906 8 2.95673 3.60115 0.11570 3.50722 8 - -
12907 1.38629 1.38629 1.38629 1.38629
12908 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12909 9 3.44834 0.12841 3.49715 2.84007 9 - -
12910 1.38629 1.38629 1.38629 1.38629
12911 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12912 10 3.44834 0.12841 3.49715 2.84007 10 - -
12913 1.38629 1.38629 1.38629 1.38629
12914 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12915 11 0.14016 3.39348 2.81050 3.29640 11 - -
12916 1.38629 1.38629 1.38629 1.38629
12917 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12918 12 2.45545 1.19657 2.52565 0.63123 12 - -
12919 1.38629 1.38629 1.38629 1.38629
12920 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12921 13 3.10197 2.60364 3.14962 0.17654 13 - -
12922 1.38629 1.38629 1.38629 1.38629
12923 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12924 14 0.14016 3.39348 2.81050 3.29640 14 - -
12925 1.38629 1.38629 1.38629 1.38629
12926 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12927 15 2.95673 3.60115 0.11570 3.50722 15 - -
12928 1.38629 1.38629 1.38629 1.38629
12929 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12930 16 2.95673 3.60115 0.11570 3.50722 16 - -
12931 1.38629 1.38629 1.38629 1.38629
12932 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12933 17 3.44834 0.12841 3.49715 2.84007 17 - -
12934 1.38629 1.38629 1.38629 1.38629
12935 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12936 18 3.44834 0.12841 3.49715 2.84007 18 - -
12937 1.38629 1.38629 1.38629 1.38629
12938 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12939 19 2.36626 1.91759 0.39750 2.43947 19 - -
12940 1.38629 1.38629 1.38629 1.38629
12941 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12942 20 0.14016 3.39348 2.81050 3.29640 20 - -
12943 1.38629 1.38629 1.38629 1.38629
12944 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12945 21 2.95673 3.60115 0.11570 3.50722 21 - -
12946 1.38629 1.38629 1.38629 1.38629
12947 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12948 22 2.95673 3.60115 0.11570 3.50722 22 - -
12949 1.38629 1.38629 1.38629 1.38629
12950 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12951 23 2.95673 3.60115 0.11570 3.50722 23 - -
12952 1.38629 1.38629 1.38629 1.38629
12953 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12954 24 3.44834 0.12841 3.49715 2.84007 24 - -
12955 1.38629 1.38629 1.38629 1.38629
12956 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12957 25 0.14016 3.39348 2.81050 3.29640 25 - -
12958 1.38629 1.38629 1.38629 1.38629
12959 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12960 26 3.44834 0.12841 3.49715 2.84007 26 - -
12961 1.38629 1.38629 1.38629 1.38629
12962 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12963 27 2.95673 3.60115 0.11570 3.50722 27 - -
12964 1.38629 1.38629 1.38629 1.38629
12965 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12966 28 3.10197 2.60364 3.14962 0.17654 28 - -
12967 1.38629 1.38629 1.38629 1.38629
12968 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12969 29 3.10197 2.60364 3.14962 0.17654 29 - -
12970 1.38629 1.38629 1.38629 1.38629
12971 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12972 30 3.10197 2.60364 3.14962 0.17654 30 - -
12973 1.38629 1.38629 1.38629 1.38629
12974 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12975 31 2.95673 3.60115 0.11570 3.50722 31 - -
12976 1.38629 1.38629 1.38629 1.38629
12977 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12978 32 3.44834 0.12841 3.49715 2.84007 32 - -
12979 1.38629 1.38629 1.38629 1.38629
12980 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12981 33 3.10197 2.60364 3.14962 0.17654 33 - -
12982 1.38629 1.38629 1.38629 1.38629
12983 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12984 34 3.10197 2.60364 3.14962 0.17654 34 - -
12985 1.38629 1.38629 1.38629 1.38629
12986 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12987 35 2.95673 3.60115 0.11570 3.50722 35 - -
12988 1.38629 1.38629 1.38629 1.38629
12989 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12990 36 2.95673 3.60115 0.11570 3.50722 36 - -
12991 1.38629 1.38629 1.38629 1.38629
12992 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12993 37 2.95673 3.60115 0.11570 3.50722 37 - -
12994 1.38629 1.38629 1.38629 1.38629
12995 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12996 38 3.10197 2.60364 3.14962 0.17654 38 - -
12997 1.38629 1.38629 1.38629 1.38629
12998 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
12999 39 2.95673 3.60115 0.11570 3.50722 39 - -
13000 1.38629 1.38629 1.38629 1.38629
13001 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13002 40 3.10197 2.60364 3.14962 0.17654 40 - -
13003 1.38629 1.38629 1.38629 1.38629
13004 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13005 41 3.44834 0.12841 3.49715 2.84007 41 - -
13006 1.38629 1.38629 1.38629 1.38629
13007 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13008 42 0.14016 3.39348 2.81050 3.29640 42 - -
13009 1.38629 1.38629 1.38629 1.38629
13010 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13011 43 3.10197 2.60364 3.14962 0.17654 43 - -
13012 1.38629 1.38629 1.38629 1.38629
13013 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13014 44 2.95673 3.60115 0.11570 3.50722 44 - -
13015 1.38629 1.38629 1.38629 1.38629
13016 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547
13017 45 3.44834 0.12841 3.49715 2.84007 45 - -
13018 1.38629 1.38629 1.38629 1.38629
13019 0.01847 4.00081 * 1.46634 0.26236 0.00000 *
13020 //
13021 HMMER3/b [3.0 | March 2010]
13022 NAME 3_End_Tracheophyta_58S_end_twentytwok_long
13023 LENG 45
13024 ALPH DNA
13025 RF no
13026 CS no
13027 MAP yes
13028 DATE Sat Feb 18 01:05:22 2012
13029 NSEQ 7
13030 EFFN 3.448730
13031 CKSUM 3430059084
13032 STATS LOCAL MSV -7.3025 0.71933
13033 STATS LOCAL VITERBI -7.6783 0.71933
13034 STATS LOCAL FORWARD -3.9356 0.71933
13035 HMM A C G T
13036 m->m m->i m->d i->m i->i d->m d->d
13037 COMPO 1.76008 1.42979 1.13365 1.32143
13038 1.38629 1.38629 1.38629 1.38629
13039 0.03605 4.03402 4.03402 1.46634 0.26236 0.00000 *
13040 1 2.97490 3.62770 0.11288 3.53655 1 - -
13041 1.38629 1.38629 1.38629 1.38629
13042 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13043 2 3.47859 0.12491 3.52610 2.86199 2 - -
13044 1.38629 1.38629 1.38629 1.38629
13045 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13046 3 3.47859 0.12491 3.52610 2.86199 3 - -
13047 1.38629 1.38629 1.38629 1.38629
13048 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13049 4 3.12868 2.62060 3.17529 0.17235 4 - -
13050 1.38629 1.38629 1.38629 1.38629
13051 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13052 5 3.47859 0.12491 3.52610 2.86199 5 - -
13053 1.38629 1.38629 1.38629 1.38629
13054 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13055 6 0.13679 3.41978 2.82753 3.32522 6 - -
13056 1.38629 1.38629 1.38629 1.38629
13057 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13058 7 0.58968 2.32944 2.25016 1.41567 7 - -
13059 1.38629 1.38629 1.38629 1.38629
13060 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13061 8 2.97490 3.62770 0.11288 3.53655 8 - -
13062 1.38629 1.38629 1.38629 1.38629
13063 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13064 9 3.47859 0.12491 3.52610 2.86199 9 - -
13065 1.38629 1.38629 1.38629 1.38629
13066 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13067 10 3.47859 0.12491 3.52610 2.86199 10 - -
13068 1.38629 1.38629 1.38629 1.38629
13069 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13070 11 0.13679 3.41978 2.82753 3.32522 11 - -
13071 1.38629 1.38629 1.38629 1.38629
13072 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13073 12 3.12868 2.62060 3.17529 0.17235 12 - -
13074 1.38629 1.38629 1.38629 1.38629
13075 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13076 13 3.12868 2.62060 3.17529 0.17235 13 - -
13077 1.38629 1.38629 1.38629 1.38629
13078 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13079 14 0.13679 3.41978 2.82753 3.32522 14 - -
13080 1.38629 1.38629 1.38629 1.38629
13081 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13082 15 2.97490 3.62770 0.11288 3.53655 15 - -
13083 1.38629 1.38629 1.38629 1.38629
13084 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13085 16 2.97490 3.62770 0.11288 3.53655 16 - -
13086 1.38629 1.38629 1.38629 1.38629
13087 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13088 17 3.12868 2.62060 3.17529 0.17235 17 - -
13089 1.38629 1.38629 1.38629 1.38629
13090 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13091 18 3.12868 2.62060 3.17529 0.17235 18 - -
13092 1.38629 1.38629 1.38629 1.38629
13093 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13094 19 2.97490 3.62770 0.11288 3.53655 19 - -
13095 1.38629 1.38629 1.38629 1.38629
13096 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13097 20 0.13679 3.41978 2.82753 3.32522 20 - -
13098 1.38629 1.38629 1.38629 1.38629
13099 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13100 21 2.97490 3.62770 0.11288 3.53655 21 - -
13101 1.38629 1.38629 1.38629 1.38629
13102 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13103 22 2.97490 3.62770 0.11288 3.53655 22 - -
13104 1.38629 1.38629 1.38629 1.38629
13105 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13106 23 2.97490 3.62770 0.11288 3.53655 23 - -
13107 1.38629 1.38629 1.38629 1.38629
13108 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13109 24 3.47859 0.12491 3.52610 2.86199 24 - -
13110 1.38629 1.38629 1.38629 1.38629
13111 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13112 25 0.13679 3.41978 2.82753 3.32522 25 - -
13113 1.38629 1.38629 1.38629 1.38629
13114 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13115 26 3.47859 0.12491 3.52610 2.86199 26 - -
13116 1.38629 1.38629 1.38629 1.38629
13117 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13118 27 2.97490 3.62770 0.11288 3.53655 27 - -
13119 1.38629 1.38629 1.38629 1.38629
13120 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13121 28 2.45321 1.12645 2.52382 0.67404 28 - -
13122 1.38629 1.38629 1.38629 1.38629
13123 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13124 29 3.12868 2.62060 3.17529 0.17235 29 - -
13125 1.38629 1.38629 1.38629 1.38629
13126 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13127 30 3.12868 2.62060 3.17529 0.17235 30 - -
13128 1.38629 1.38629 1.38629 1.38629
13129 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13130 31 2.97490 3.62770 0.11288 3.53655 31 - -
13131 1.38629 1.38629 1.38629 1.38629
13132 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13133 32 3.47859 0.12491 3.52610 2.86199 32 - -
13134 1.38629 1.38629 1.38629 1.38629
13135 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13136 33 3.12868 2.62060 3.17529 0.17235 33 - -
13137 1.38629 1.38629 1.38629 1.38629
13138 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13139 34 3.12868 2.62060 3.17529 0.17235 34 - -
13140 1.38629 1.38629 1.38629 1.38629
13141 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13142 35 2.97490 3.62770 0.11288 3.53655 35 - -
13143 1.38629 1.38629 1.38629 1.38629
13144 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13145 36 2.97490 3.62770 0.11288 3.53655 36 - -
13146 1.38629 1.38629 1.38629 1.38629
13147 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13148 37 2.97490 3.62770 0.11288 3.53655 37 - -
13149 1.38629 1.38629 1.38629 1.38629
13150 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13151 38 3.12868 2.62060 3.17529 0.17235 38 - -
13152 1.38629 1.38629 1.38629 1.38629
13153 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13154 39 2.97490 3.62770 0.11288 3.53655 39 - -
13155 1.38629 1.38629 1.38629 1.38629
13156 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13157 40 3.12868 2.62060 3.17529 0.17235 40 - -
13158 1.38629 1.38629 1.38629 1.38629
13159 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13160 41 3.47859 0.12491 3.52610 2.86199 41 - -
13161 1.38629 1.38629 1.38629 1.38629
13162 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13163 42 0.13679 3.41978 2.82753 3.32522 42 - -
13164 1.38629 1.38629 1.38629 1.38629
13165 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13166 43 3.12868 2.62060 3.17529 0.17235 43 - -
13167 1.38629 1.38629 1.38629 1.38629
13168 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13169 44 2.97490 3.62770 0.11288 3.53655 44 - -
13170 1.38629 1.38629 1.38629 1.38629
13171 0.03605 4.03402 4.03402 1.46634 0.26236 1.09861 0.40547
13172 45 3.47859 0.12491 3.52610 2.86199 45 - -
13173 1.38629 1.38629 1.38629 1.38629
13174 0.01819 4.01615 * 1.46634 0.26236 0.00000 *
13175 //
13176 HMMER3/b [3.0 | March 2010]
13177 NAME 3_End_Tracheophyta_58S_end_twentytwol_long
13178 LENG 45
13179 ALPH DNA
13180 RF no
13181 CS no
13182 MAP yes
13183 DATE Sat Feb 18 01:05:41 2012
13184 NSEQ 116
13185 EFFN 3.961304
13186 CKSUM 538949657
13187 STATS LOCAL MSV -7.1544 0.71931
13188 STATS LOCAL VITERBI -7.8271 0.71931
13189 STATS LOCAL FORWARD -3.3492 0.71931
13190 HMM A C G T
13191 m->m m->i m->d i->m i->i d->m d->d
13192 COMPO 1.70967 1.06073 1.05535 2.08105
13193 1.38629 1.38629 1.38629 1.38629
13194 0.03300 4.12087 4.12087 1.46634 0.26236 0.00000 *
13195 1 3.07219 3.77129 0.09890 3.69572 1 - -
13196 1.38629 1.38629 1.38629 1.38629
13197 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13198 2 3.64389 0.10765 3.68396 2.98017 2 - -
13199 1.38629 1.38629 1.38629 1.38629
13200 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13201 3 3.64389 0.10765 3.68396 2.98017 3 - -
13202 1.38629 1.38629 1.38629 1.38629
13203 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13204 4 3.35116 0.17078 3.40267 2.42285 4 - -
13205 1.38629 1.38629 1.38629 1.38629
13206 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13207 5 3.07219 3.77129 0.09890 3.69572 5 - -
13208 1.38629 1.38629 1.38629 1.38629
13209 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13210 6 0.11978 3.56458 2.92066 3.48420 6 - -
13211 1.38629 1.38629 1.38629 1.38629
13212 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13213 7 3.07219 3.77129 0.09890 3.69572 7 - -
13214 1.38629 1.38629 1.38629 1.38629
13215 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13216 8 3.07219 3.77129 0.09890 3.69572 8 - -
13217 1.38629 1.38629 1.38629 1.38629
13218 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13219 9 3.57056 0.12179 3.61350 2.82067 9 - -
13220 1.38629 1.38629 1.38629 1.38629
13221 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13222 10 3.64389 0.10765 3.68396 2.98017 10 - -
13223 1.38629 1.38629 1.38629 1.38629
13224 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13225 11 0.22681 3.05073 2.68861 2.43467 11 - -
13226 1.38629 1.38629 1.38629 1.38629
13227 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13228 12 0.30585 3.01533 1.83789 2.89466 12 - -
13229 1.38629 1.38629 1.38629 1.38629
13230 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13231 13 2.51625 0.86740 2.58719 0.85810 13 - -
13232 1.38629 1.38629 1.38629 1.38629
13233 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13234 14 3.08039 0.14719 3.42228 2.84230 14 - -
13235 1.38629 1.38629 1.38629 1.38629
13236 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13237 15 2.98457 3.58256 0.12541 3.23158 15 - -
13238 1.38629 1.38629 1.38629 1.38629
13239 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13240 16 3.07219 3.77129 0.09890 3.69572 16 - -
13241 1.38629 1.38629 1.38629 1.38629
13242 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13243 17 2.70822 0.46588 2.77703 1.41248 17 - -
13244 1.38629 1.38629 1.38629 1.38629
13245 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13246 18 3.29513 0.18546 3.34863 2.33222 18 - -
13247 1.38629 1.38629 1.38629 1.38629
13248 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13249 19 0.83191 2.61877 0.89684 2.47654 19 - -
13250 1.38629 1.38629 1.38629 1.38629
13251 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13252 20 0.11978 3.56458 2.92066 3.48420 20 - -
13253 1.38629 1.38629 1.38629 1.38629
13254 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13255 21 3.07219 3.77129 0.09890 3.69572 21 - -
13256 1.38629 1.38629 1.38629 1.38629
13257 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13258 22 3.07219 3.77129 0.09890 3.69572 22 - -
13259 1.38629 1.38629 1.38629 1.38629
13260 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13261 23 3.07219 3.77129 0.09890 3.69572 23 - -
13262 1.38629 1.38629 1.38629 1.38629
13263 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13264 24 3.64389 0.10765 3.68396 2.98017 24 - -
13265 1.38629 1.38629 1.38629 1.38629
13266 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13267 25 0.11978 3.56458 2.92066 3.48420 25 - -
13268 1.38629 1.38629 1.38629 1.38629
13269 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13270 26 3.64389 0.10765 3.68396 2.98017 26 - -
13271 1.38629 1.38629 1.38629 1.38629
13272 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13273 27 3.07219 3.77129 0.09890 3.69572 27 - -
13274 1.38629 1.38629 1.38629 1.38629
13275 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13276 28 3.27872 2.71575 3.31947 0.15083 28 - -
13277 1.38629 1.38629 1.38629 1.38629
13278 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13279 29 3.17025 0.22248 3.22784 2.13851 29 - -
13280 1.38629 1.38629 1.38629 1.38629
13281 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13282 30 2.85803 0.35730 2.92386 1.66428 30 - -
13283 1.38629 1.38629 1.38629 1.38629
13284 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13285 31 3.07219 3.77129 0.09890 3.69572 31 - -
13286 1.38629 1.38629 1.38629 1.38629
13287 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13288 32 3.64389 0.10765 3.68396 2.98017 32 - -
13289 1.38629 1.38629 1.38629 1.38629
13290 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13291 33 3.54039 0.12787 3.58455 2.76016 33 - -
13292 1.38629 1.38629 1.38629 1.38629
13293 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13294 34 3.27872 2.71575 3.31947 0.15083 34 - -
13295 1.38629 1.38629 1.38629 1.38629
13296 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13297 35 3.07219 3.77129 0.09890 3.69572 35 - -
13298 1.38629 1.38629 1.38629 1.38629
13299 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13300 36 3.07219 3.77129 0.09890 3.69572 36 - -
13301 1.38629 1.38629 1.38629 1.38629
13302 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13303 37 3.07219 3.77129 0.09890 3.69572 37 - -
13304 1.38629 1.38629 1.38629 1.38629
13305 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13306 38 3.64389 0.10765 3.68396 2.98017 38 - -
13307 1.38629 1.38629 1.38629 1.38629
13308 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13309 39 3.07219 3.77129 0.09890 3.69572 39 - -
13310 1.38629 1.38629 1.38629 1.38629
13311 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13312 40 3.27872 2.71575 3.31947 0.15083 40 - -
13313 1.38629 1.38629 1.38629 1.38629
13314 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13315 41 3.64389 0.10765 3.68396 2.98017 41 - -
13316 1.38629 1.38629 1.38629 1.38629
13317 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13318 42 0.11978 3.56458 2.92066 3.48420 42 - -
13319 1.38629 1.38629 1.38629 1.38629
13320 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13321 43 0.18025 3.34188 2.40153 3.24455 43 - -
13322 1.38629 1.38629 1.38629 1.38629
13323 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13324 44 2.25273 2.47350 0.29035 2.77099 44 - -
13325 1.38629 1.38629 1.38629 1.38629
13326 0.03300 4.12087 4.12087 1.46634 0.26236 1.09861 0.40547
13327 45 3.64389 0.10765 3.68396 2.98017 45 - -
13328 1.38629 1.38629 1.38629 1.38629
13329 0.01664 4.10451 * 1.46634 0.26236 0.00000 *
13330 //
13331 HMMER3/b [3.0 | March 2010]
13332 NAME 3_End_Tracheophyta_58S_end_twentytwom_long
13333 LENG 45
13334 ALPH DNA
13335 RF no
13336 CS no
13337 MAP yes
13338 DATE Sat Feb 18 01:05:48 2012
13339 NSEQ 5
13340 EFFN 3.012695
13341 CKSUM 3140000806
13342 STATS LOCAL MSV -8.2727 0.71934
13343 STATS LOCAL VITERBI -7.9956 0.71934
13344 STATS LOCAL FORWARD -3.4801 0.71934
13345 HMM A C G T
13346 m->m m->i m->d i->m i->i d->m d->d
13347 COMPO 1.72318 1.06872 1.04741 2.06195
13348 1.38629 1.38629 1.38629 1.38629
13349 0.03912 3.95368 3.95368 1.46634 0.26236 0.00000 *
13350 1 2.87311 3.48058 0.12960 3.37444 1 - -
13351 1.38629 1.38629 1.38629 1.38629
13352 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13353 2 3.31228 0.14560 3.36668 2.74015 2 - -
13354 1.38629 1.38629 1.38629 1.38629
13355 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13356 3 3.31228 0.14560 3.36668 2.74015 3 - -
13357 1.38629 1.38629 1.38629 1.38629
13358 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13359 4 3.31228 0.14560 3.36668 2.74015 4 - -
13360 1.38629 1.38629 1.38629 1.38629
13361 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13362 5 2.87311 3.48058 0.12960 3.37444 5 - -
13363 1.38629 1.38629 1.38629 1.38629
13364 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13365 6 0.15652 3.27570 2.73342 3.16767 6 - -
13366 1.38629 1.38629 1.38629 1.38629
13367 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13368 7 2.87311 3.48058 0.12960 3.37444 7 - -
13369 1.38629 1.38629 1.38629 1.38629
13370 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13371 8 2.87311 3.48058 0.12960 3.37444 8 - -
13372 1.38629 1.38629 1.38629 1.38629
13373 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13374 9 3.31228 0.14560 3.36668 2.74015 9 - -
13375 1.38629 1.38629 1.38629 1.38629
13376 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13377 10 3.31228 0.14560 3.36668 2.74015 10 - -
13378 1.38629 1.38629 1.38629 1.38629
13379 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13380 11 2.87311 3.48058 0.12960 3.37444 11 - -
13381 1.38629 1.38629 1.38629 1.38629
13382 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13383 12 2.98425 2.52849 3.03633 0.19646 12 - -
13384 1.38629 1.38629 1.38629 1.38629
13385 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13386 13 3.31228 0.14560 3.36668 2.74015 13 - -
13387 1.38629 1.38629 1.38629 1.38629
13388 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13389 14 0.15652 3.27570 2.73342 3.16767 14 - -
13390 1.38629 1.38629 1.38629 1.38629
13391 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13392 15 2.87311 3.48058 0.12960 3.37444 15 - -
13393 1.38629 1.38629 1.38629 1.38629
13394 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13395 16 2.87311 3.48058 0.12960 3.37444 16 - -
13396 1.38629 1.38629 1.38629 1.38629
13397 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13398 17 3.31228 0.14560 3.36668 2.74015 17 - -
13399 1.38629 1.38629 1.38629 1.38629
13400 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13401 18 3.31228 0.14560 3.36668 2.74015 18 - -
13402 1.38629 1.38629 1.38629 1.38629
13403 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13404 19 0.15652 3.27570 2.73342 3.16767 19 - -
13405 1.38629 1.38629 1.38629 1.38629
13406 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13407 20 0.15652 3.27570 2.73342 3.16767 20 - -
13408 1.38629 1.38629 1.38629 1.38629
13409 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13410 21 2.87311 3.48058 0.12960 3.37444 21 - -
13411 1.38629 1.38629 1.38629 1.38629
13412 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13413 22 2.87311 3.48058 0.12960 3.37444 22 - -
13414 1.38629 1.38629 1.38629 1.38629
13415 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13416 23 2.87311 3.48058 0.12960 3.37444 23 - -
13417 1.38629 1.38629 1.38629 1.38629
13418 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13419 24 3.31228 0.14560 3.36668 2.74015 24 - -
13420 1.38629 1.38629 1.38629 1.38629
13421 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13422 25 0.15652 3.27570 2.73342 3.16767 25 - -
13423 1.38629 1.38629 1.38629 1.38629
13424 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13425 26 3.31228 0.14560 3.36668 2.74015 26 - -
13426 1.38629 1.38629 1.38629 1.38629
13427 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13428 27 2.87311 3.48058 0.12960 3.37444 27 - -
13429 1.38629 1.38629 1.38629 1.38629
13430 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13431 28 2.98425 2.52849 3.03633 0.19646 28 - -
13432 1.38629 1.38629 1.38629 1.38629
13433 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13434 29 3.31228 0.14560 3.36668 2.74015 29 - -
13435 1.38629 1.38629 1.38629 1.38629
13436 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13437 30 3.31228 0.14560 3.36668 2.74015 30 - -
13438 1.38629 1.38629 1.38629 1.38629
13439 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13440 31 2.87311 3.48058 0.12960 3.37444 31 - -
13441 1.38629 1.38629 1.38629 1.38629
13442 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13443 32 3.31228 0.14560 3.36668 2.74015 32 - -
13444 1.38629 1.38629 1.38629 1.38629
13445 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13446 33 3.31228 0.14560 3.36668 2.74015 33 - -
13447 1.38629 1.38629 1.38629 1.38629
13448 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13449 34 2.98425 2.52849 3.03633 0.19646 34 - -
13450 1.38629 1.38629 1.38629 1.38629
13451 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13452 35 2.87311 3.48058 0.12960 3.37444 35 - -
13453 1.38629 1.38629 1.38629 1.38629
13454 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13455 36 2.87311 3.48058 0.12960 3.37444 36 - -
13456 1.38629 1.38629 1.38629 1.38629
13457 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13458 37 2.87311 3.48058 0.12960 3.37444 37 - -
13459 1.38629 1.38629 1.38629 1.38629
13460 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13461 38 3.31228 0.14560 3.36668 2.74015 38 - -
13462 1.38629 1.38629 1.38629 1.38629
13463 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13464 39 2.87311 3.48058 0.12960 3.37444 39 - -
13465 1.38629 1.38629 1.38629 1.38629
13466 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13467 40 2.98425 2.52849 3.03633 0.19646 40 - -
13468 1.38629 1.38629 1.38629 1.38629
13469 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13470 41 3.31228 0.14560 3.36668 2.74015 41 - -
13471 1.38629 1.38629 1.38629 1.38629
13472 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13473 42 0.15652 3.27570 2.73342 3.16767 42 - -
13474 1.38629 1.38629 1.38629 1.38629
13475 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13476 43 0.15652 3.27570 2.73342 3.16767 43 - -
13477 1.38629 1.38629 1.38629 1.38629
13478 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13479 44 2.87311 3.48058 0.12960 3.37444 44 - -
13480 1.38629 1.38629 1.38629 1.38629
13481 0.03912 3.95368 3.95368 1.46634 0.26236 1.09861 0.40547
13482 45 3.31228 0.14560 3.36668 2.74015 45 - -
13483 1.38629 1.38629 1.38629 1.38629
13484 0.01975 3.93431 * 1.46634 0.26236 0.00000 *
13485 //
13486 HMMER3/b [3.0 | March 2010]
13487 NAME 3_End_Tracheophyta_58S_end_twentytwon_long
13488 LENG 45
13489 ALPH DNA
13490 RF no
13491 CS no
13492 MAP yes
13493 DATE Sat Feb 18 01:05:56 2012
13494 NSEQ 89
13495 EFFN 3.805206
13496 CKSUM 1005965737
13497 STATS LOCAL MSV -7.3815 0.71932
13498 STATS LOCAL VITERBI -7.8302 0.71932
13499 STATS LOCAL FORWARD -3.5553 0.71932
13500 HMM A C G T
13501 m->m m->i m->d i->m i->i d->m d->d
13502 COMPO 1.64251 1.12328 1.08155 1.95033
13503 1.38629 1.38629 1.38629 1.38629
13504 0.03387 4.09521 4.09521 1.46634 0.26236 0.00000 *
13505 1 3.04470 3.73053 0.10266 3.65047 1 - -
13506 1.38629 1.38629 1.38629 1.38629
13507 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13508 2 3.59670 0.11228 3.63895 2.94668 2 - -
13509 1.38629 1.38629 1.38629 1.38629
13510 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13511 3 3.59670 0.11228 3.63895 2.94668 3 - -
13512 1.38629 1.38629 1.38629 1.38629
13513 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13514 4 2.66051 1.47511 2.72546 0.45284 4 - -
13515 1.38629 1.38629 1.38629 1.38629
13516 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13517 5 2.97092 3.57249 0.12491 3.26803 5 - -
13518 1.38629 1.38629 1.38629 1.38629
13519 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13520 6 0.12440 3.52302 2.89399 3.43852 6 - -
13521 1.38629 1.38629 1.38629 1.38629
13522 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13523 7 2.97300 3.57677 0.12426 3.27724 7 - -
13524 1.38629 1.38629 1.38629 1.38629
13525 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13526 8 3.04470 3.73053 0.10266 3.65047 8 - -
13527 1.38629 1.38629 1.38629 1.38629
13528 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13529 9 3.59670 0.11228 3.63895 2.94668 9 - -
13530 1.38629 1.38629 1.38629 1.38629
13531 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13532 10 3.46992 0.13784 3.51689 2.68896 10 - -
13533 1.38629 1.38629 1.38629 1.38629
13534 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13535 11 0.12440 3.52302 2.89399 3.43852 11 - -
13536 1.38629 1.38629 1.38629 1.38629
13537 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13538 12 0.20209 3.02215 2.58211 2.83581 12 - -
13539 1.38629 1.38629 1.38629 1.38629
13540 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13541 13 3.44636 0.14295 3.49423 2.64547 13 - -
13542 1.38629 1.38629 1.38629 1.38629
13543 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13544 14 2.70171 2.30113 2.96020 0.24724 14 - -
13545 1.38629 1.38629 1.38629 1.38629
13546 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13547 15 2.64615 3.54987 0.14062 3.45677 15 - -
13548 1.38629 1.38629 1.38629 1.38629
13549 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13550 16 3.04470 3.73053 0.10266 3.65047 16 - -
13551 1.38629 1.38629 1.38629 1.38629
13552 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13553 17 3.45477 0.14111 3.50232 2.66087 17 - -
13554 1.38629 1.38629 1.38629 1.38629
13555 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13556 18 2.89013 0.32717 2.95513 1.76379 18 - -
13557 1.38629 1.38629 1.38629 1.38629
13558 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13559 19 0.19587 3.26763 2.32726 3.16474 19 - -
13560 1.38629 1.38629 1.38629 1.38629
13561 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13562 20 0.12440 3.52302 2.89399 3.43852 20 - -
13563 1.38629 1.38629 1.38629 1.38629
13564 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13565 21 2.61866 3.53526 0.14397 3.44103 21 - -
13566 1.38629 1.38629 1.38629 1.38629
13567 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13568 22 3.04470 3.73053 0.10266 3.65047 22 - -
13569 1.38629 1.38629 1.38629 1.38629
13570 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13571 23 3.04470 3.73053 0.10266 3.65047 23 - -
13572 1.38629 1.38629 1.38629 1.38629
13573 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13574 24 3.59670 0.11228 3.63895 2.94668 24 - -
13575 1.38629 1.38629 1.38629 1.38629
13576 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13577 25 0.12440 3.52302 2.89399 3.43852 25 - -
13578 1.38629 1.38629 1.38629 1.38629
13579 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13580 26 3.50014 0.13147 3.54596 2.74642 26 - -
13581 1.38629 1.38629 1.38629 1.38629
13582 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13583 27 3.04470 3.73053 0.10266 3.65047 27 - -
13584 1.38629 1.38629 1.38629 1.38629
13585 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13586 28 3.15922 2.49068 3.20480 0.18138 28 - -
13587 1.38629 1.38629 1.38629 1.38629
13588 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13589 29 3.08200 0.24476 3.14207 2.05534 29 - -
13590 1.38629 1.38629 1.38629 1.38629
13591 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13592 30 3.44545 0.14315 3.49335 2.64381 30 - -
13593 1.38629 1.38629 1.38629 1.38629
13594 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13595 31 3.04470 3.73053 0.10266 3.65047 31 - -
13596 1.38629 1.38629 1.38629 1.38629
13597 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13598 32 3.59670 0.11228 3.63895 2.94668 32 - -
13599 1.38629 1.38629 1.38629 1.38629
13600 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13601 33 3.38625 0.15662 3.43637 2.53892 33 - -
13602 1.38629 1.38629 1.38629 1.38629
13603 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13604 34 3.23512 2.68809 3.27758 0.15675 34 - -
13605 1.38629 1.38629 1.38629 1.38629
13606 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13607 35 3.04470 3.73053 0.10266 3.65047 35 - -
13608 1.38629 1.38629 1.38629 1.38629
13609 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13610 36 3.04470 3.73053 0.10266 3.65047 36 - -
13611 1.38629 1.38629 1.38629 1.38629
13612 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13613 37 3.04470 3.73053 0.10266 3.65047 37 - -
13614 1.38629 1.38629 1.38629 1.38629
13615 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13616 38 2.88303 0.26842 2.66900 2.20610 38 - -
13617 1.38629 1.38629 1.38629 1.38629
13618 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13619 39 3.04470 3.73053 0.10266 3.65047 39 - -
13620 1.38629 1.38629 1.38629 1.38629
13621 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13622 40 3.23512 2.68809 3.27758 0.15675 40 - -
13623 1.38629 1.38629 1.38629 1.38629
13624 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13625 41 3.24277 0.19357 3.29791 2.30284 41 - -
13626 1.38629 1.38629 1.38629 1.38629
13627 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13628 42 0.12440 3.52302 2.89399 3.43852 42 - -
13629 1.38629 1.38629 1.38629 1.38629
13630 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13631 43 0.23909 2.99369 2.65083 2.38640 43 - -
13632 1.38629 1.38629 1.38629 1.38629
13633 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13634 44 2.26597 3.32606 0.19816 3.21653 44 - -
13635 1.38629 1.38629 1.38629 1.38629
13636 0.03387 4.09521 4.09521 1.46634 0.26236 1.09861 0.40547
13637 45 3.44691 0.14283 3.49476 2.64649 45 - -
13638 1.38629 1.38629 1.38629 1.38629
13639 0.01708 4.07842 * 1.46634 0.26236 0.00000 *
13640 //
13641 HMMER3/b [3.0 | March 2010]
13642 NAME 3_End_Tracheophyta_58S_end_twentytwoo_long
13643 LENG 45
13644 ALPH DNA
13645 RF no
13646 CS no
13647 MAP yes
13648 DATE Sat Feb 18 01:06:04 2012
13649 NSEQ 6
13650 EFFN 3.120117
13651 CKSUM 1384330421
13652 STATS LOCAL MSV -8.0965 0.71932
13653 STATS LOCAL VITERBI -7.8574 0.71932
13654 STATS LOCAL FORWARD -3.6227 0.71932
13655 HMM A C G T
13656 m->m m->i m->d i->m i->i d->m d->d
13657 COMPO 1.63454 1.21367 1.14412 1.66418
13658 1.38629 1.38629 1.38629 1.38629
13659 0.03832 3.97408 3.97408 1.46634 0.26236 0.00000 *
13660 1 2.90013 3.51923 0.12494 3.41691 1 - -
13661 1.38629 1.38629 1.38629 1.38629
13662 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13663 2 3.35564 0.13984 3.40831 2.77225 2 - -
13664 1.38629 1.38629 1.38629 1.38629
13665 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13666 3 3.35564 0.13984 3.40831 2.77225 3 - -
13667 1.38629 1.38629 1.38629 1.38629
13668 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13669 4 3.35564 0.13984 3.40831 2.77225 4 - -
13670 1.38629 1.38629 1.38629 1.38629
13671 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13672 5 2.90013 3.51923 0.12494 3.41691 5 - -
13673 1.38629 1.38629 1.38629 1.38629
13674 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13675 6 0.15109 3.31317 2.75811 3.20856 6 - -
13676 1.38629 1.38629 1.38629 1.38629
13677 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13678 7 2.90013 3.51923 0.12494 3.41691 7 - -
13679 1.38629 1.38629 1.38629 1.38629
13680 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13681 8 2.90013 3.51923 0.12494 3.41691 8 - -
13682 1.38629 1.38629 1.38629 1.38629
13683 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13684 9 3.35564 0.13984 3.40831 2.77225 9 - -
13685 1.38629 1.38629 1.38629 1.38629
13686 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13687 10 3.35564 0.13984 3.40831 2.77225 10 - -
13688 1.38629 1.38629 1.38629 1.38629
13689 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13690 11 0.15109 3.31317 2.75811 3.20856 11 - -
13691 1.38629 1.38629 1.38629 1.38629
13692 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13693 12 0.15109 3.31317 2.75811 3.20856 12 - -
13694 1.38629 1.38629 1.38629 1.38629
13695 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13696 13 3.35564 0.13984 3.40831 2.77225 13 - -
13697 1.38629 1.38629 1.38629 1.38629
13698 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13699 14 3.35564 0.13984 3.40831 2.77225 14 - -
13700 1.38629 1.38629 1.38629 1.38629
13701 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13702 15 2.90013 3.51923 0.12494 3.41691 15 - -
13703 1.38629 1.38629 1.38629 1.38629
13704 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13705 16 2.90013 3.51923 0.12494 3.41691 16 - -
13706 1.38629 1.38629 1.38629 1.38629
13707 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13708 17 3.02138 2.55227 3.07208 0.18991 17 - -
13709 1.38629 1.38629 1.38629 1.38629
13710 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13711 18 3.35564 0.13984 3.40831 2.77225 18 - -
13712 1.38629 1.38629 1.38629 1.38629
13713 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13714 19 0.15109 3.31317 2.75811 3.20856 19 - -
13715 1.38629 1.38629 1.38629 1.38629
13716 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13717 20 0.15109 3.31317 2.75811 3.20856 20 - -
13718 1.38629 1.38629 1.38629 1.38629
13719 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13720 21 2.90013 3.51923 0.12494 3.41691 21 - -
13721 1.38629 1.38629 1.38629 1.38629
13722 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13723 22 2.90013 3.51923 0.12494 3.41691 22 - -
13724 1.38629 1.38629 1.38629 1.38629
13725 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13726 23 2.90013 3.51923 0.12494 3.41691 23 - -
13727 1.38629 1.38629 1.38629 1.38629
13728 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13729 24 3.35564 0.13984 3.40831 2.77225 24 - -
13730 1.38629 1.38629 1.38629 1.38629
13731 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13732 25 0.15109 3.31317 2.75811 3.20856 25 - -
13733 1.38629 1.38629 1.38629 1.38629
13734 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13735 26 3.35564 0.13984 3.40831 2.77225 26 - -
13736 1.38629 1.38629 1.38629 1.38629
13737 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13738 27 2.90013 3.51923 0.12494 3.41691 27 - -
13739 1.38629 1.38629 1.38629 1.38629
13740 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13741 28 3.02138 2.55227 3.07208 0.18991 28 - -
13742 1.38629 1.38629 1.38629 1.38629
13743 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13744 29 3.02138 2.55227 3.07208 0.18991 29 - -
13745 1.38629 1.38629 1.38629 1.38629
13746 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13747 30 3.02138 2.55227 3.07208 0.18991 30 - -
13748 1.38629 1.38629 1.38629 1.38629
13749 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13750 31 3.02138 2.55227 3.07208 0.18991 31 - -
13751 1.38629 1.38629 1.38629 1.38629
13752 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13753 32 3.35564 0.13984 3.40831 2.77225 32 - -
13754 1.38629 1.38629 1.38629 1.38629
13755 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13756 33 3.35564 0.13984 3.40831 2.77225 33 - -
13757 1.38629 1.38629 1.38629 1.38629
13758 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13759 34 3.02138 2.55227 3.07208 0.18991 34 - -
13760 1.38629 1.38629 1.38629 1.38629
13761 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13762 35 2.90013 3.51923 0.12494 3.41691 35 - -
13763 1.38629 1.38629 1.38629 1.38629
13764 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13765 36 2.90013 3.51923 0.12494 3.41691 36 - -
13766 1.38629 1.38629 1.38629 1.38629
13767 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13768 37 2.90013 3.51923 0.12494 3.41691 37 - -
13769 1.38629 1.38629 1.38629 1.38629
13770 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13771 38 3.02138 2.55227 3.07208 0.18991 38 - -
13772 1.38629 1.38629 1.38629 1.38629
13773 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13774 39 2.90013 3.51923 0.12494 3.41691 39 - -
13775 1.38629 1.38629 1.38629 1.38629
13776 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13777 40 3.02138 2.55227 3.07208 0.18991 40 - -
13778 1.38629 1.38629 1.38629 1.38629
13779 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13780 41 3.35564 0.13984 3.40831 2.77225 41 - -
13781 1.38629 1.38629 1.38629 1.38629
13782 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13783 42 0.15109 3.31317 2.75811 3.20856 42 - -
13784 1.38629 1.38629 1.38629 1.38629
13785 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13786 43 0.15109 3.31317 2.75811 3.20856 43 - -
13787 1.38629 1.38629 1.38629 1.38629
13788 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13789 44 2.90013 3.51923 0.12494 3.41691 44 - -
13790 1.38629 1.38629 1.38629 1.38629
13791 0.03832 3.97408 3.97408 1.46634 0.26236 1.09861 0.40547
13792 45 3.35564 0.13984 3.40831 2.77225 45 - -
13793 1.38629 1.38629 1.38629 1.38629
13794 0.01934 3.95510 * 1.46634 0.26236 0.00000 *
13795 //
13796 HMMER3/b [3.0 | March 2010]
13797 NAME 3_End_Tracheophyta_58S_end_twentytwop_long
13798 LENG 45
13799 ALPH DNA
13800 RF no
13801 CS no
13802 MAP yes
13803 DATE Sat Feb 18 01:06:14 2012
13804 NSEQ 3
13805 EFFN 3.000000
13806 CKSUM 1100070553
13807 STATS LOCAL MSV -8.1489 0.71969
13808 STATS LOCAL VITERBI -7.8550 0.71969
13809 STATS LOCAL FORWARD -3.7050 0.71969
13810 HMM A C G T
13811 m->m m->i m->d i->m i->i d->m d->d
13812 COMPO 1.55400 1.11344 1.20131 1.83651
13813 1.38629 1.38629 1.38629 1.38629
13814 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
13815 1 2.86982 3.47591 0.13017 3.36931 1 - -
13816 1.38629 1.38629 1.38629 1.38629
13817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13818 2 3.30705 0.14631 3.36166 2.73626 2 - -
13819 1.38629 1.38629 1.38629 1.38629
13820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13821 3 3.30705 0.14631 3.36166 2.73626 3 - -
13822 1.38629 1.38629 1.38629 1.38629
13823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13824 4 2.97980 2.52563 3.03204 0.19727 4 - -
13825 1.38629 1.38629 1.38629 1.38629
13826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13827 5 2.86982 3.47591 0.13017 3.36931 5 - -
13828 1.38629 1.38629 1.38629 1.38629
13829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13830 6 0.15719 3.27118 2.73043 3.16274 6 - -
13831 1.38629 1.38629 1.38629 1.38629
13832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13833 7 0.15719 3.27118 2.73043 3.16274 7 - -
13834 1.38629 1.38629 1.38629 1.38629
13835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13836 8 2.97980 2.52563 3.03204 0.19727 8 - -
13837 1.38629 1.38629 1.38629 1.38629
13838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13839 9 3.30705 0.14631 3.36166 2.73626 9 - -
13840 1.38629 1.38629 1.38629 1.38629
13841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13842 10 3.30705 0.14631 3.36166 2.73626 10 - -
13843 1.38629 1.38629 1.38629 1.38629
13844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13845 11 0.15719 3.27118 2.73043 3.16274 11 - -
13846 1.38629 1.38629 1.38629 1.38629
13847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13848 12 0.15719 3.27118 2.73043 3.16274 12 - -
13849 1.38629 1.38629 1.38629 1.38629
13850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13851 13 3.30705 0.14631 3.36166 2.73626 13 - -
13852 1.38629 1.38629 1.38629 1.38629
13853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13854 14 2.97980 2.52563 3.03204 0.19727 14 - -
13855 1.38629 1.38629 1.38629 1.38629
13856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13857 15 2.86982 3.47591 0.13017 3.36931 15 - -
13858 1.38629 1.38629 1.38629 1.38629
13859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13860 16 2.86982 3.47591 0.13017 3.36931 16 - -
13861 1.38629 1.38629 1.38629 1.38629
13862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13863 17 3.30705 0.14631 3.36166 2.73626 17 - -
13864 1.38629 1.38629 1.38629 1.38629
13865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13866 18 3.30705 0.14631 3.36166 2.73626 18 - -
13867 1.38629 1.38629 1.38629 1.38629
13868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13869 19 0.15719 3.27118 2.73043 3.16274 19 - -
13870 1.38629 1.38629 1.38629 1.38629
13871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13872 20 0.15719 3.27118 2.73043 3.16274 20 - -
13873 1.38629 1.38629 1.38629 1.38629
13874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13875 21 2.86982 3.47591 0.13017 3.36931 21 - -
13876 1.38629 1.38629 1.38629 1.38629
13877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13878 22 2.86982 3.47591 0.13017 3.36931 22 - -
13879 1.38629 1.38629 1.38629 1.38629
13880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13881 23 2.86982 3.47591 0.13017 3.36931 23 - -
13882 1.38629 1.38629 1.38629 1.38629
13883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13884 24 3.30705 0.14631 3.36166 2.73626 24 - -
13885 1.38629 1.38629 1.38629 1.38629
13886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13887 25 0.15719 3.27118 2.73043 3.16274 25 - -
13888 1.38629 1.38629 1.38629 1.38629
13889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13890 26 3.30705 0.14631 3.36166 2.73626 26 - -
13891 1.38629 1.38629 1.38629 1.38629
13892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13893 27 2.86982 3.47591 0.13017 3.36931 27 - -
13894 1.38629 1.38629 1.38629 1.38629
13895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13896 28 2.97980 2.52563 3.03204 0.19727 28 - -
13897 1.38629 1.38629 1.38629 1.38629
13898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13899 29 3.30705 0.14631 3.36166 2.73626 29 - -
13900 1.38629 1.38629 1.38629 1.38629
13901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13902 30 3.30705 0.14631 3.36166 2.73626 30 - -
13903 1.38629 1.38629 1.38629 1.38629
13904 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13905 31 2.86982 3.47591 0.13017 3.36931 31 - -
13906 1.38629 1.38629 1.38629 1.38629
13907 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13908 32 3.30705 0.14631 3.36166 2.73626 32 - -
13909 1.38629 1.38629 1.38629 1.38629
13910 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13911 33 3.30705 0.14631 3.36166 2.73626 33 - -
13912 1.38629 1.38629 1.38629 1.38629
13913 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13914 34 2.97980 2.52563 3.03204 0.19727 34 - -
13915 1.38629 1.38629 1.38629 1.38629
13916 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13917 35 2.86982 3.47591 0.13017 3.36931 35 - -
13918 1.38629 1.38629 1.38629 1.38629
13919 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13920 36 2.86982 3.47591 0.13017 3.36931 36 - -
13921 1.38629 1.38629 1.38629 1.38629
13922 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13923 37 2.86982 3.47591 0.13017 3.36931 37 - -
13924 1.38629 1.38629 1.38629 1.38629
13925 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13926 38 3.30705 0.14631 3.36166 2.73626 38 - -
13927 1.38629 1.38629 1.38629 1.38629
13928 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13929 39 2.86982 3.47591 0.13017 3.36931 39 - -
13930 1.38629 1.38629 1.38629 1.38629
13931 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13932 40 2.97980 2.52563 3.03204 0.19727 40 - -
13933 1.38629 1.38629 1.38629 1.38629
13934 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13935 41 3.30705 0.14631 3.36166 2.73626 41 - -
13936 1.38629 1.38629 1.38629 1.38629
13937 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13938 42 0.15719 3.27118 2.73043 3.16274 42 - -
13939 1.38629 1.38629 1.38629 1.38629
13940 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13941 43 0.15719 3.27118 2.73043 3.16274 43 - -
13942 1.38629 1.38629 1.38629 1.38629
13943 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13944 44 2.86982 3.47591 0.13017 3.36931 44 - -
13945 1.38629 1.38629 1.38629 1.38629
13946 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13947 45 3.30705 0.14631 3.36166 2.73626 45 - -
13948 1.38629 1.38629 1.38629 1.38629
13949 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
13950 //
13951 HMMER3/b [3.0 | March 2010]
13952 NAME 3_End_Tracheophyta_58S_end_twentytwoq_long
13953 LENG 45
13954 ALPH DNA
13955 RF no
13956 CS no
13957 MAP yes
13958 DATE Sat Feb 18 01:06:22 2012
13959 NSEQ 3
13960 EFFN 3.000000
13961 CKSUM 4026879485
13962 STATS LOCAL MSV -8.2087 0.71964
13963 STATS LOCAL VITERBI -7.9281 0.71964
13964 STATS LOCAL FORWARD -3.2659 0.71964
13965 HMM A C G T
13966 m->m m->i m->d i->m i->i d->m d->d
13967 COMPO 1.71764 1.21985 1.04576 1.74978
13968 1.38629 1.38629 1.38629 1.38629
13969 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
13970 1 2.86982 3.47591 0.13017 3.36931 1 - -
13971 1.38629 1.38629 1.38629 1.38629
13972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13973 2 3.30705 0.14631 3.36166 2.73626 2 - -
13974 1.38629 1.38629 1.38629 1.38629
13975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13976 3 3.30705 0.14631 3.36166 2.73626 3 - -
13977 1.38629 1.38629 1.38629 1.38629
13978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13979 4 3.30705 0.14631 3.36166 2.73626 4 - -
13980 1.38629 1.38629 1.38629 1.38629
13981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13982 5 2.97980 2.52563 3.03204 0.19727 5 - -
13983 1.38629 1.38629 1.38629 1.38629
13984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13985 6 0.15719 3.27118 2.73043 3.16274 6 - -
13986 1.38629 1.38629 1.38629 1.38629
13987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13988 7 0.15719 3.27118 2.73043 3.16274 7 - -
13989 1.38629 1.38629 1.38629 1.38629
13990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13991 8 2.86982 3.47591 0.13017 3.36931 8 - -
13992 1.38629 1.38629 1.38629 1.38629
13993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13994 9 3.30705 0.14631 3.36166 2.73626 9 - -
13995 1.38629 1.38629 1.38629 1.38629
13996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
13997 10 2.97980 2.52563 3.03204 0.19727 10 - -
13998 1.38629 1.38629 1.38629 1.38629
13999 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14000 11 2.97980 2.52563 3.03204 0.19727 11 - -
14001 1.38629 1.38629 1.38629 1.38629
14002 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14003 12 3.30705 0.14631 3.36166 2.73626 12 - -
14004 1.38629 1.38629 1.38629 1.38629
14005 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14006 13 3.30705 0.14631 3.36166 2.73626 13 - -
14007 1.38629 1.38629 1.38629 1.38629
14008 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14009 14 2.86982 3.47591 0.13017 3.36931 14 - -
14010 1.38629 1.38629 1.38629 1.38629
14011 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14012 15 2.86982 3.47591 0.13017 3.36931 15 - -
14013 1.38629 1.38629 1.38629 1.38629
14014 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14015 16 2.86982 3.47591 0.13017 3.36931 16 - -
14016 1.38629 1.38629 1.38629 1.38629
14017 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14018 17 3.30705 0.14631 3.36166 2.73626 17 - -
14019 1.38629 1.38629 1.38629 1.38629
14020 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14021 18 3.30705 0.14631 3.36166 2.73626 18 - -
14022 1.38629 1.38629 1.38629 1.38629
14023 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14024 19 2.86982 3.47591 0.13017 3.36931 19 - -
14025 1.38629 1.38629 1.38629 1.38629
14026 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14027 20 0.15719 3.27118 2.73043 3.16274 20 - -
14028 1.38629 1.38629 1.38629 1.38629
14029 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14030 21 2.86982 3.47591 0.13017 3.36931 21 - -
14031 1.38629 1.38629 1.38629 1.38629
14032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14033 22 2.86982 3.47591 0.13017 3.36931 22 - -
14034 1.38629 1.38629 1.38629 1.38629
14035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14036 23 2.86982 3.47591 0.13017 3.36931 23 - -
14037 1.38629 1.38629 1.38629 1.38629
14038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14039 24 3.30705 0.14631 3.36166 2.73626 24 - -
14040 1.38629 1.38629 1.38629 1.38629
14041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14042 25 0.15719 3.27118 2.73043 3.16274 25 - -
14043 1.38629 1.38629 1.38629 1.38629
14044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14045 26 0.15719 3.27118 2.73043 3.16274 26 - -
14046 1.38629 1.38629 1.38629 1.38629
14047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14048 27 2.86982 3.47591 0.13017 3.36931 27 - -
14049 1.38629 1.38629 1.38629 1.38629
14050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14051 28 3.30705 0.14631 3.36166 2.73626 28 - -
14052 1.38629 1.38629 1.38629 1.38629
14053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14054 29 3.30705 0.14631 3.36166 2.73626 29 - -
14055 1.38629 1.38629 1.38629 1.38629
14056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14057 30 2.97980 2.52563 3.03204 0.19727 30 - -
14058 1.38629 1.38629 1.38629 1.38629
14059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14060 31 2.86982 3.47591 0.13017 3.36931 31 - -
14061 1.38629 1.38629 1.38629 1.38629
14062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14063 32 3.30705 0.14631 3.36166 2.73626 32 - -
14064 1.38629 1.38629 1.38629 1.38629
14065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14066 33 2.86982 3.47591 0.13017 3.36931 33 - -
14067 1.38629 1.38629 1.38629 1.38629
14068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14069 34 2.97980 2.52563 3.03204 0.19727 34 - -
14070 1.38629 1.38629 1.38629 1.38629
14071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14072 35 2.86982 3.47591 0.13017 3.36931 35 - -
14073 1.38629 1.38629 1.38629 1.38629
14074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14075 36 2.86982 3.47591 0.13017 3.36931 36 - -
14076 1.38629 1.38629 1.38629 1.38629
14077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14078 37 2.86982 3.47591 0.13017 3.36931 37 - -
14079 1.38629 1.38629 1.38629 1.38629
14080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14081 38 3.30705 0.14631 3.36166 2.73626 38 - -
14082 1.38629 1.38629 1.38629 1.38629
14083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14084 39 2.86982 3.47591 0.13017 3.36931 39 - -
14085 1.38629 1.38629 1.38629 1.38629
14086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14087 40 2.97980 2.52563 3.03204 0.19727 40 - -
14088 1.38629 1.38629 1.38629 1.38629
14089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14090 41 3.30705 0.14631 3.36166 2.73626 41 - -
14091 1.38629 1.38629 1.38629 1.38629
14092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14093 42 0.15719 3.27118 2.73043 3.16274 42 - -
14094 1.38629 1.38629 1.38629 1.38629
14095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14096 43 0.15719 3.27118 2.73043 3.16274 43 - -
14097 1.38629 1.38629 1.38629 1.38629
14098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14099 44 2.86982 3.47591 0.13017 3.36931 44 - -
14100 1.38629 1.38629 1.38629 1.38629
14101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14102 45 2.97980 2.52563 3.03204 0.19727 45 - -
14103 1.38629 1.38629 1.38629 1.38629
14104 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
14105 //
14106 HMMER3/b [3.0 | March 2010]
14107 NAME 3_End_Tracheophyta_58S_end_twentytwor_long
14108 LENG 45
14109 ALPH DNA
14110 RF no
14111 CS no
14112 MAP yes
14113 DATE Sat Feb 18 01:06:32 2012
14114 NSEQ 2
14115 EFFN 2.000000
14116 CKSUM 2741897416
14117 STATS LOCAL MSV -7.7301 0.72718
14118 STATS LOCAL VITERBI -8.3714 0.72718
14119 STATS LOCAL FORWARD -3.1304 0.72718
14120 HMM A C G T
14121 m->m m->i m->d i->m i->i d->m d->d
14122 COMPO 1.83360 1.15080 1.12517 1.61354
14123 1.38629 1.38629 1.38629 1.38629
14124 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14125 1 2.53331 3.02441 0.20344 2.88069 1 - -
14126 1.38629 1.38629 1.38629 1.38629
14127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14128 2 2.81865 0.23582 2.88868 2.35662 2 - -
14129 1.38629 1.38629 1.38629 1.38629
14130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14131 3 2.81865 0.23582 2.88868 2.35662 3 - -
14132 1.38629 1.38629 1.38629 1.38629
14133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14134 4 2.81865 0.23582 2.88868 2.35662 4 - -
14135 1.38629 1.38629 1.38629 1.38629
14136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14137 5 2.53331 3.02441 0.20344 2.88069 5 - -
14138 1.38629 1.38629 1.38629 1.38629
14139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14140 6 0.23862 2.84929 2.43386 2.70756 6 - -
14141 1.38629 1.38629 1.38629 1.38629
14142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14143 7 2.53331 3.02441 0.20344 2.88069 7 - -
14144 1.38629 1.38629 1.38629 1.38629
14145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14146 8 2.53331 3.02441 0.20344 2.88069 8 - -
14147 1.38629 1.38629 1.38629 1.38629
14148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14149 9 2.81865 0.23582 2.88868 2.35662 9 - -
14150 1.38629 1.38629 1.38629 1.38629
14151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14152 10 2.81865 0.23582 2.88868 2.35662 10 - -
14153 1.38629 1.38629 1.38629 1.38629
14154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14155 11 2.57915 2.25909 2.64442 0.28946 11 - -
14156 1.38629 1.38629 1.38629 1.38629
14157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14158 12 2.81865 0.23582 2.88868 2.35662 12 - -
14159 1.38629 1.38629 1.38629 1.38629
14160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14161 13 2.81865 0.23582 2.88868 2.35662 13 - -
14162 1.38629 1.38629 1.38629 1.38629
14163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14164 14 2.57915 2.25909 2.64442 0.28946 14 - -
14165 1.38629 1.38629 1.38629 1.38629
14166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14167 15 2.53331 3.02441 0.20344 2.88069 15 - -
14168 1.38629 1.38629 1.38629 1.38629
14169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14170 16 0.23862 2.84929 2.43386 2.70756 16 - -
14171 1.38629 1.38629 1.38629 1.38629
14172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14173 17 2.81865 0.23582 2.88868 2.35662 17 - -
14174 1.38629 1.38629 1.38629 1.38629
14175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14176 18 2.57915 2.25909 2.64442 0.28946 18 - -
14177 1.38629 1.38629 1.38629 1.38629
14178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14179 19 2.53331 3.02441 0.20344 2.88069 19 - -
14180 1.38629 1.38629 1.38629 1.38629
14181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14182 20 0.23862 2.84929 2.43386 2.70756 20 - -
14183 1.38629 1.38629 1.38629 1.38629
14184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14185 21 2.53331 3.02441 0.20344 2.88069 21 - -
14186 1.38629 1.38629 1.38629 1.38629
14187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14188 22 2.53331 3.02441 0.20344 2.88069 22 - -
14189 1.38629 1.38629 1.38629 1.38629
14190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14191 23 2.53331 3.02441 0.20344 2.88069 23 - -
14192 1.38629 1.38629 1.38629 1.38629
14193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14194 24 2.81865 0.23582 2.88868 2.35662 24 - -
14195 1.38629 1.38629 1.38629 1.38629
14196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14197 25 0.23862 2.84929 2.43386 2.70756 25 - -
14198 1.38629 1.38629 1.38629 1.38629
14199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14200 26 2.57915 2.25909 2.64442 0.28946 26 - -
14201 1.38629 1.38629 1.38629 1.38629
14202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14203 27 2.53331 3.02441 0.20344 2.88069 27 - -
14204 1.38629 1.38629 1.38629 1.38629
14205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14206 28 2.81865 0.23582 2.88868 2.35662 28 - -
14207 1.38629 1.38629 1.38629 1.38629
14208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14209 29 2.81865 0.23582 2.88868 2.35662 29 - -
14210 1.38629 1.38629 1.38629 1.38629
14211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14212 30 2.57915 2.25909 2.64442 0.28946 30 - -
14213 1.38629 1.38629 1.38629 1.38629
14214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14215 31 2.53331 3.02441 0.20344 2.88069 31 - -
14216 1.38629 1.38629 1.38629 1.38629
14217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14218 32 2.81865 0.23582 2.88868 2.35662 32 - -
14219 1.38629 1.38629 1.38629 1.38629
14220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14221 33 2.81865 0.23582 2.88868 2.35662 33 - -
14222 1.38629 1.38629 1.38629 1.38629
14223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14224 34 2.57915 2.25909 2.64442 0.28946 34 - -
14225 1.38629 1.38629 1.38629 1.38629
14226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14227 35 2.53331 3.02441 0.20344 2.88069 35 - -
14228 1.38629 1.38629 1.38629 1.38629
14229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14230 36 2.53331 3.02441 0.20344 2.88069 36 - -
14231 1.38629 1.38629 1.38629 1.38629
14232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14233 37 2.53331 3.02441 0.20344 2.88069 37 - -
14234 1.38629 1.38629 1.38629 1.38629
14235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14236 38 2.81865 0.23582 2.88868 2.35662 38 - -
14237 1.38629 1.38629 1.38629 1.38629
14238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14239 39 2.53331 3.02441 0.20344 2.88069 39 - -
14240 1.38629 1.38629 1.38629 1.38629
14241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14242 40 2.57915 2.25909 2.64442 0.28946 40 - -
14243 1.38629 1.38629 1.38629 1.38629
14244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14245 41 2.81865 0.23582 2.88868 2.35662 41 - -
14246 1.38629 1.38629 1.38629 1.38629
14247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14248 42 0.23862 2.84929 2.43386 2.70756 42 - -
14249 1.38629 1.38629 1.38629 1.38629
14250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14251 43 2.57915 2.25909 2.64442 0.28946 43 - -
14252 1.38629 1.38629 1.38629 1.38629
14253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14254 44 2.53331 3.02441 0.20344 2.88069 44 - -
14255 1.38629 1.38629 1.38629 1.38629
14256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14257 45 2.81865 0.23582 2.88868 2.35662 45 - -
14258 1.38629 1.38629 1.38629 1.38629
14259 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14260 //
14261 HMMER3/b [3.0 | March 2010]
14262 NAME 3_End_Tracheophyta_58S_end_twentytwos_long
14263 LENG 45
14264 ALPH DNA
14265 RF no
14266 CS no
14267 MAP yes
14268 DATE Sat Feb 18 01:06:39 2012
14269 NSEQ 4
14270 EFFN 3.175781
14271 CKSUM 1647101817
14272 STATS LOCAL MSV -8.1934 0.71933
14273 STATS LOCAL VITERBI -7.6964 0.71933
14274 STATS LOCAL FORWARD -3.7242 0.71933
14275 HMM A C G T
14276 m->m m->i m->d i->m i->i d->m d->d
14277 COMPO 2.05058 1.08581 1.04413 1.70534
14278 1.38629 1.38629 1.38629 1.38629
14279 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
14280 1 2.91360 3.53861 0.12268 3.43825 1 - -
14281 1.38629 1.38629 1.38629 1.38629
14282 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14283 2 3.37748 0.13704 3.42926 2.78832 2 - -
14284 1.38629 1.38629 1.38629 1.38629
14285 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14286 3 3.37748 0.13704 3.42926 2.78832 3 - -
14287 1.38629 1.38629 1.38629 1.38629
14288 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14289 4 3.37748 0.13704 3.42926 2.78832 4 - -
14290 1.38629 1.38629 1.38629 1.38629
14291 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14292 5 2.91360 3.53861 0.12268 3.43825 5 - -
14293 1.38629 1.38629 1.38629 1.38629
14294 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14295 6 2.91360 3.53861 0.12268 3.43825 6 - -
14296 1.38629 1.38629 1.38629 1.38629
14297 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14298 7 0.14843 3.33206 2.77050 3.22920 7 - -
14299 1.38629 1.38629 1.38629 1.38629
14300 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14301 8 2.91360 3.53861 0.12268 3.43825 8 - -
14302 1.38629 1.38629 1.38629 1.38629
14303 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14304 9 3.37748 0.13704 3.42926 2.78832 9 - -
14305 1.38629 1.38629 1.38629 1.38629
14306 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14307 10 3.37748 0.13704 3.42926 2.78832 10 - -
14308 1.38629 1.38629 1.38629 1.38629
14309 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14310 11 3.04021 2.56430 3.09020 0.18668 11 - -
14311 1.38629 1.38629 1.38629 1.38629
14312 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14313 12 3.04021 2.56430 3.09020 0.18668 12 - -
14314 1.38629 1.38629 1.38629 1.38629
14315 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14316 13 3.37748 0.13704 3.42926 2.78832 13 - -
14317 1.38629 1.38629 1.38629 1.38629
14318 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14319 14 3.04021 2.56430 3.09020 0.18668 14 - -
14320 1.38629 1.38629 1.38629 1.38629
14321 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14322 15 2.91360 3.53861 0.12268 3.43825 15 - -
14323 1.38629 1.38629 1.38629 1.38629
14324 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14325 16 2.91360 3.53861 0.12268 3.43825 16 - -
14326 1.38629 1.38629 1.38629 1.38629
14327 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14328 17 3.37748 0.13704 3.42926 2.78832 17 - -
14329 1.38629 1.38629 1.38629 1.38629
14330 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14331 18 3.37748 0.13704 3.42926 2.78832 18 - -
14332 1.38629 1.38629 1.38629 1.38629
14333 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14334 19 2.91360 3.53861 0.12268 3.43825 19 - -
14335 1.38629 1.38629 1.38629 1.38629
14336 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14337 20 0.14843 3.33206 2.77050 3.22920 20 - -
14338 1.38629 1.38629 1.38629 1.38629
14339 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14340 21 2.91360 3.53861 0.12268 3.43825 21 - -
14341 1.38629 1.38629 1.38629 1.38629
14342 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14343 22 2.91360 3.53861 0.12268 3.43825 22 - -
14344 1.38629 1.38629 1.38629 1.38629
14345 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14346 23 2.91360 3.53861 0.12268 3.43825 23 - -
14347 1.38629 1.38629 1.38629 1.38629
14348 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14349 24 3.37748 0.13704 3.42926 2.78832 24 - -
14350 1.38629 1.38629 1.38629 1.38629
14351 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14352 25 0.14843 3.33206 2.77050 3.22920 25 - -
14353 1.38629 1.38629 1.38629 1.38629
14354 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14355 26 3.37748 0.13704 3.42926 2.78832 26 - -
14356 1.38629 1.38629 1.38629 1.38629
14357 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14358 27 2.91360 3.53861 0.12268 3.43825 27 - -
14359 1.38629 1.38629 1.38629 1.38629
14360 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14361 28 3.04021 2.56430 3.09020 0.18668 28 - -
14362 1.38629 1.38629 1.38629 1.38629
14363 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14364 29 3.37748 0.13704 3.42926 2.78832 29 - -
14365 1.38629 1.38629 1.38629 1.38629
14366 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14367 30 3.04021 2.56430 3.09020 0.18668 30 - -
14368 1.38629 1.38629 1.38629 1.38629
14369 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14370 31 2.91360 3.53861 0.12268 3.43825 31 - -
14371 1.38629 1.38629 1.38629 1.38629
14372 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14373 32 3.37748 0.13704 3.42926 2.78832 32 - -
14374 1.38629 1.38629 1.38629 1.38629
14375 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14376 33 3.37748 0.13704 3.42926 2.78832 33 - -
14377 1.38629 1.38629 1.38629 1.38629
14378 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14379 34 3.04021 2.56430 3.09020 0.18668 34 - -
14380 1.38629 1.38629 1.38629 1.38629
14381 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14382 35 2.91360 3.53861 0.12268 3.43825 35 - -
14383 1.38629 1.38629 1.38629 1.38629
14384 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14385 36 2.91360 3.53861 0.12268 3.43825 36 - -
14386 1.38629 1.38629 1.38629 1.38629
14387 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14388 37 2.91360 3.53861 0.12268 3.43825 37 - -
14389 1.38629 1.38629 1.38629 1.38629
14390 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14391 38 3.37748 0.13704 3.42926 2.78832 38 - -
14392 1.38629 1.38629 1.38629 1.38629
14393 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14394 39 2.91360 3.53861 0.12268 3.43825 39 - -
14395 1.38629 1.38629 1.38629 1.38629
14396 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14397 40 3.04021 2.56430 3.09020 0.18668 40 - -
14398 1.38629 1.38629 1.38629 1.38629
14399 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14400 41 3.37748 0.13704 3.42926 2.78832 41 - -
14401 1.38629 1.38629 1.38629 1.38629
14402 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14403 42 0.14843 3.33206 2.77050 3.22920 42 - -
14404 1.38629 1.38629 1.38629 1.38629
14405 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14406 43 2.37895 0.96228 2.45142 0.82289 43 - -
14407 1.38629 1.38629 1.38629 1.38629
14408 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14409 44 2.91360 3.53861 0.12268 3.43825 44 - -
14410 1.38629 1.38629 1.38629 1.38629
14411 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
14412 45 3.37748 0.13704 3.42926 2.78832 45 - -
14413 1.38629 1.38629 1.38629 1.38629
14414 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
14415 //
14416 HMMER3/b [3.0 | March 2010]
14417 NAME 3_End_Tracheophyta_58S_end_twentytwot_long
14418 LENG 45
14419 ALPH DNA
14420 RF no
14421 CS no
14422 MAP yes
14423 DATE Sat Feb 18 01:06:47 2012
14424 NSEQ 3
14425 EFFN 3.000000
14426 CKSUM 3561680478
14427 STATS LOCAL MSV -8.2737 0.71962
14428 STATS LOCAL VITERBI -7.7056 0.71962
14429 STATS LOCAL FORWARD -3.6667 0.71962
14430 HMM A C G T
14431 m->m m->i m->d i->m i->i d->m d->d
14432 COMPO 1.72378 1.06331 1.14947 1.83576
14433 1.38629 1.38629 1.38629 1.38629
14434 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
14435 1 2.86982 3.47591 0.13017 3.36931 1 - -
14436 1.38629 1.38629 1.38629 1.38629
14437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14438 2 3.30705 0.14631 3.36166 2.73626 2 - -
14439 1.38629 1.38629 1.38629 1.38629
14440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14441 3 3.30705 0.14631 3.36166 2.73626 3 - -
14442 1.38629 1.38629 1.38629 1.38629
14443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14444 4 3.30705 0.14631 3.36166 2.73626 4 - -
14445 1.38629 1.38629 1.38629 1.38629
14446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14447 5 2.86982 3.47591 0.13017 3.36931 5 - -
14448 1.38629 1.38629 1.38629 1.38629
14449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14450 6 0.15719 3.27118 2.73043 3.16274 6 - -
14451 1.38629 1.38629 1.38629 1.38629
14452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14453 7 0.15719 3.27118 2.73043 3.16274 7 - -
14454 1.38629 1.38629 1.38629 1.38629
14455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14456 8 2.86982 3.47591 0.13017 3.36931 8 - -
14457 1.38629 1.38629 1.38629 1.38629
14458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14459 9 3.30705 0.14631 3.36166 2.73626 9 - -
14460 1.38629 1.38629 1.38629 1.38629
14461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14462 10 3.30705 0.14631 3.36166 2.73626 10 - -
14463 1.38629 1.38629 1.38629 1.38629
14464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14465 11 0.15719 3.27118 2.73043 3.16274 11 - -
14466 1.38629 1.38629 1.38629 1.38629
14467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14468 12 2.97980 2.52563 3.03204 0.19727 12 - -
14469 1.38629 1.38629 1.38629 1.38629
14470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14471 13 2.97980 2.52563 3.03204 0.19727 13 - -
14472 1.38629 1.38629 1.38629 1.38629
14473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14474 14 0.15719 3.27118 2.73043 3.16274 14 - -
14475 1.38629 1.38629 1.38629 1.38629
14476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14477 15 2.86982 3.47591 0.13017 3.36931 15 - -
14478 1.38629 1.38629 1.38629 1.38629
14479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14480 16 2.86982 3.47591 0.13017 3.36931 16 - -
14481 1.38629 1.38629 1.38629 1.38629
14482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14483 17 3.30705 0.14631 3.36166 2.73626 17 - -
14484 1.38629 1.38629 1.38629 1.38629
14485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14486 18 3.30705 0.14631 3.36166 2.73626 18 - -
14487 1.38629 1.38629 1.38629 1.38629
14488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14489 19 2.86982 3.47591 0.13017 3.36931 19 - -
14490 1.38629 1.38629 1.38629 1.38629
14491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14492 20 0.15719 3.27118 2.73043 3.16274 20 - -
14493 1.38629 1.38629 1.38629 1.38629
14494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14495 21 2.86982 3.47591 0.13017 3.36931 21 - -
14496 1.38629 1.38629 1.38629 1.38629
14497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14498 22 2.86982 3.47591 0.13017 3.36931 22 - -
14499 1.38629 1.38629 1.38629 1.38629
14500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14501 23 2.86982 3.47591 0.13017 3.36931 23 - -
14502 1.38629 1.38629 1.38629 1.38629
14503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14504 24 3.30705 0.14631 3.36166 2.73626 24 - -
14505 1.38629 1.38629 1.38629 1.38629
14506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14507 25 0.15719 3.27118 2.73043 3.16274 25 - -
14508 1.38629 1.38629 1.38629 1.38629
14509 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14510 26 3.30705 0.14631 3.36166 2.73626 26 - -
14511 1.38629 1.38629 1.38629 1.38629
14512 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14513 27 2.86982 3.47591 0.13017 3.36931 27 - -
14514 1.38629 1.38629 1.38629 1.38629
14515 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14516 28 3.30705 0.14631 3.36166 2.73626 28 - -
14517 1.38629 1.38629 1.38629 1.38629
14518 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14519 29 3.30705 0.14631 3.36166 2.73626 29 - -
14520 1.38629 1.38629 1.38629 1.38629
14521 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14522 30 2.97980 2.52563 3.03204 0.19727 30 - -
14523 1.38629 1.38629 1.38629 1.38629
14524 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14525 31 2.86982 3.47591 0.13017 3.36931 31 - -
14526 1.38629 1.38629 1.38629 1.38629
14527 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14528 32 3.30705 0.14631 3.36166 2.73626 32 - -
14529 1.38629 1.38629 1.38629 1.38629
14530 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14531 33 3.30705 0.14631 3.36166 2.73626 33 - -
14532 1.38629 1.38629 1.38629 1.38629
14533 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14534 34 2.97980 2.52563 3.03204 0.19727 34 - -
14535 1.38629 1.38629 1.38629 1.38629
14536 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14537 35 2.86982 3.47591 0.13017 3.36931 35 - -
14538 1.38629 1.38629 1.38629 1.38629
14539 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14540 36 2.86982 3.47591 0.13017 3.36931 36 - -
14541 1.38629 1.38629 1.38629 1.38629
14542 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14543 37 2.86982 3.47591 0.13017 3.36931 37 - -
14544 1.38629 1.38629 1.38629 1.38629
14545 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14546 38 3.30705 0.14631 3.36166 2.73626 38 - -
14547 1.38629 1.38629 1.38629 1.38629
14548 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14549 39 2.86982 3.47591 0.13017 3.36931 39 - -
14550 1.38629 1.38629 1.38629 1.38629
14551 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14552 40 2.97980 2.52563 3.03204 0.19727 40 - -
14553 1.38629 1.38629 1.38629 1.38629
14554 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14555 41 3.30705 0.14631 3.36166 2.73626 41 - -
14556 1.38629 1.38629 1.38629 1.38629
14557 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14558 42 2.97980 2.52563 3.03204 0.19727 42 - -
14559 1.38629 1.38629 1.38629 1.38629
14560 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14561 43 3.30705 0.14631 3.36166 2.73626 43 - -
14562 1.38629 1.38629 1.38629 1.38629
14563 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14564 44 0.15719 3.27118 2.73043 3.16274 44 - -
14565 1.38629 1.38629 1.38629 1.38629
14566 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
14567 45 3.30705 0.14631 3.36166 2.73626 45 - -
14568 1.38629 1.38629 1.38629 1.38629
14569 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
14570 //
14571 HMMER3/b [3.0 | March 2010]
14572 NAME 3_End_Tracheophyta_58S_end_twentytwou_long
14573 LENG 45
14574 ALPH DNA
14575 RF no
14576 CS no
14577 MAP yes
14578 DATE Sat Feb 18 01:06:56 2012
14579 NSEQ 2
14580 EFFN 2.000000
14581 CKSUM 240493008
14582 STATS LOCAL MSV -7.5228 0.72718
14583 STATS LOCAL VITERBI -8.2769 0.72718
14584 STATS LOCAL FORWARD -3.1256 0.72718
14585 HMM A C G T
14586 m->m m->i m->d i->m i->i d->m d->d
14587 COMPO 1.83332 1.15081 1.12531 1.61351
14588 1.38629 1.38629 1.38629 1.38629
14589 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
14590 1 2.53331 3.02441 0.20344 2.88069 1 - -
14591 1.38629 1.38629 1.38629 1.38629
14592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14593 2 2.81865 0.23582 2.88868 2.35662 2 - -
14594 1.38629 1.38629 1.38629 1.38629
14595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14596 3 2.81865 0.23582 2.88868 2.35662 3 - -
14597 1.38629 1.38629 1.38629 1.38629
14598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14599 4 2.81865 0.23582 2.88868 2.35662 4 - -
14600 1.38629 1.38629 1.38629 1.38629
14601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14602 5 2.53331 3.02441 0.20344 2.88069 5 - -
14603 1.38629 1.38629 1.38629 1.38629
14604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14605 6 0.23862 2.84929 2.43386 2.70756 6 - -
14606 1.38629 1.38629 1.38629 1.38629
14607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14608 7 0.23862 2.84929 2.43386 2.70756 7 - -
14609 1.38629 1.38629 1.38629 1.38629
14610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14611 8 2.53331 3.02441 0.20344 2.88069 8 - -
14612 1.38629 1.38629 1.38629 1.38629
14613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14614 9 2.81865 0.23582 2.88868 2.35662 9 - -
14615 1.38629 1.38629 1.38629 1.38629
14616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14617 10 2.81865 0.23582 2.88868 2.35662 10 - -
14618 1.38629 1.38629 1.38629 1.38629
14619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14620 11 2.57915 2.25909 2.64442 0.28946 11 - -
14621 1.38629 1.38629 1.38629 1.38629
14622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14623 12 2.57915 2.25909 2.64442 0.28946 12 - -
14624 1.38629 1.38629 1.38629 1.38629
14625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14626 13 2.81865 0.23582 2.88868 2.35662 13 - -
14627 1.38629 1.38629 1.38629 1.38629
14628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14629 14 2.57915 2.25909 2.64442 0.28946 14 - -
14630 1.38629 1.38629 1.38629 1.38629
14631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14632 15 2.53331 3.02441 0.20344 2.88069 15 - -
14633 1.38629 1.38629 1.38629 1.38629
14634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14635 16 2.53331 3.02441 0.20344 2.88069 16 - -
14636 1.38629 1.38629 1.38629 1.38629
14637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14638 17 2.81865 0.23582 2.88868 2.35662 17 - -
14639 1.38629 1.38629 1.38629 1.38629
14640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14641 18 2.81865 0.23582 2.88868 2.35662 18 - -
14642 1.38629 1.38629 1.38629 1.38629
14643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14644 19 2.53331 3.02441 0.20344 2.88069 19 - -
14645 1.38629 1.38629 1.38629 1.38629
14646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14647 20 0.23862 2.84929 2.43386 2.70756 20 - -
14648 1.38629 1.38629 1.38629 1.38629
14649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14650 21 2.53331 3.02441 0.20344 2.88069 21 - -
14651 1.38629 1.38629 1.38629 1.38629
14652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14653 22 2.53331 3.02441 0.20344 2.88069 22 - -
14654 1.38629 1.38629 1.38629 1.38629
14655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14656 23 2.53331 3.02441 0.20344 2.88069 23 - -
14657 1.38629 1.38629 1.38629 1.38629
14658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14659 24 2.81865 0.23582 2.88868 2.35662 24 - -
14660 1.38629 1.38629 1.38629 1.38629
14661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14662 25 0.23862 2.84929 2.43386 2.70756 25 - -
14663 1.38629 1.38629 1.38629 1.38629
14664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14665 26 2.81865 0.23582 2.88868 2.35662 26 - -
14666 1.38629 1.38629 1.38629 1.38629
14667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14668 27 2.53331 3.02441 0.20344 2.88069 27 - -
14669 1.38629 1.38629 1.38629 1.38629
14670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14671 28 2.81865 0.23582 2.88868 2.35662 28 - -
14672 1.38629 1.38629 1.38629 1.38629
14673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14674 29 2.81865 0.23582 2.88868 2.35662 29 - -
14675 1.38629 1.38629 1.38629 1.38629
14676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14677 30 2.57915 2.25909 2.64442 0.28946 30 - -
14678 1.38629 1.38629 1.38629 1.38629
14679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14680 31 2.53331 3.02441 0.20344 2.88069 31 - -
14681 1.38629 1.38629 1.38629 1.38629
14682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14683 32 2.81865 0.23582 2.88868 2.35662 32 - -
14684 1.38629 1.38629 1.38629 1.38629
14685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14686 33 2.81865 0.23582 2.88868 2.35662 33 - -
14687 1.38629 1.38629 1.38629 1.38629
14688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14689 34 2.57915 2.25909 2.64442 0.28946 34 - -
14690 1.38629 1.38629 1.38629 1.38629
14691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14692 35 2.53331 3.02441 0.20344 2.88069 35 - -
14693 1.38629 1.38629 1.38629 1.38629
14694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14695 36 2.53331 3.02441 0.20344 2.88069 36 - -
14696 1.38629 1.38629 1.38629 1.38629
14697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14698 37 2.53331 3.02441 0.20344 2.88069 37 - -
14699 1.38629 1.38629 1.38629 1.38629
14700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14701 38 2.57915 2.25909 2.64442 0.28946 38 - -
14702 1.38629 1.38629 1.38629 1.38629
14703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14704 39 2.53331 3.02441 0.20344 2.88069 39 - -
14705 1.38629 1.38629 1.38629 1.38629
14706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14707 40 2.57915 2.25909 2.64442 0.28946 40 - -
14708 1.38629 1.38629 1.38629 1.38629
14709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14710 41 2.81865 0.23582 2.88868 2.35662 41 - -
14711 1.38629 1.38629 1.38629 1.38629
14712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14713 42 0.23862 2.84929 2.43386 2.70756 42 - -
14714 1.38629 1.38629 1.38629 1.38629
14715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14716 43 2.57915 2.25909 2.64442 0.28946 43 - -
14717 1.38629 1.38629 1.38629 1.38629
14718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14719 44 2.53331 3.02441 0.20344 2.88069 44 - -
14720 1.38629 1.38629 1.38629 1.38629
14721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
14722 45 2.81865 0.23582 2.88868 2.35662 45 - -
14723 1.38629 1.38629 1.38629 1.38629
14724 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
14725 //
14726 HMMER3/b [3.0 | March 2010]
14727 NAME 3_End_Tracheophyta_58S_end_two_long
14728 LENG 45
14729 ALPH DNA
14730 RF no
14731 CS no
14732 MAP yes
14733 DATE Sat Feb 18 00:55:23 2012
14734 NSEQ 29
14735 EFFN 3.246216
14736 CKSUM 3154564610
14737 STATS LOCAL MSV -8.3504 0.71932
14738 STATS LOCAL VITERBI -7.5845 0.71932
14739 STATS LOCAL FORWARD -3.8947 0.71932
14740 HMM A C G T
14741 m->m m->i m->d i->m i->i d->m d->d
14742 COMPO 1.81993 1.14571 1.08965 1.69482
14743 1.38629 1.38629 1.38629 1.38629
14744 0.03741 3.99751 3.99751 1.46634 0.26236 0.00000 *
14745 1 2.93015 3.56253 0.11996 3.46460 1 - -
14746 1.38629 1.38629 1.38629 1.38629
14747 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14748 2 3.40451 0.13367 3.45517 2.80813 2 - -
14749 1.38629 1.38629 1.38629 1.38629
14750 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14751 3 3.40451 0.13367 3.45517 2.80813 3 - -
14752 1.38629 1.38629 1.38629 1.38629
14753 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14754 4 3.11719 0.20567 3.17613 2.30386 4 - -
14755 1.38629 1.38629 1.38629 1.38629
14756 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14757 5 2.93015 3.56253 0.11996 3.46460 5 - -
14758 1.38629 1.38629 1.38629 1.38629
14759 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14760 6 0.14521 3.35547 2.78579 3.25479 6 - -
14761 1.38629 1.38629 1.38629 1.38629
14762 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14763 7 0.14521 3.35547 2.78579 3.25479 7 - -
14764 1.38629 1.38629 1.38629 1.38629
14765 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14766 8 2.93015 3.56253 0.11996 3.46460 8 - -
14767 1.38629 1.38629 1.38629 1.38629
14768 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14769 9 3.40451 0.13367 3.45517 2.80813 9 - -
14770 1.38629 1.38629 1.38629 1.38629
14771 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14772 10 3.40451 0.13367 3.45517 2.80813 10 - -
14773 1.38629 1.38629 1.38629 1.38629
14774 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14775 11 3.06365 2.57925 3.11275 0.18275 11 - -
14776 1.38629 1.38629 1.38629 1.38629
14777 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14778 12 3.06365 2.57925 3.11275 0.18275 12 - -
14779 1.38629 1.38629 1.38629 1.38629
14780 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14781 13 3.06365 2.57925 3.11275 0.18275 13 - -
14782 1.38629 1.38629 1.38629 1.38629
14783 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14784 14 0.14521 3.35547 2.78579 3.25479 14 - -
14785 1.38629 1.38629 1.38629 1.38629
14786 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14787 15 2.93015 3.56253 0.11996 3.46460 15 - -
14788 1.38629 1.38629 1.38629 1.38629
14789 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14790 16 2.93015 3.56253 0.11996 3.46460 16 - -
14791 1.38629 1.38629 1.38629 1.38629
14792 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14793 17 2.69737 1.80003 2.75945 0.35098 17 - -
14794 1.38629 1.38629 1.38629 1.38629
14795 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14796 18 3.40451 0.13367 3.45517 2.80813 18 - -
14797 1.38629 1.38629 1.38629 1.38629
14798 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14799 19 2.93015 3.56253 0.11996 3.46460 19 - -
14800 1.38629 1.38629 1.38629 1.38629
14801 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14802 20 0.14521 3.35547 2.78579 3.25479 20 - -
14803 1.38629 1.38629 1.38629 1.38629
14804 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14805 21 2.93015 3.56253 0.11996 3.46460 21 - -
14806 1.38629 1.38629 1.38629 1.38629
14807 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14808 22 2.93015 3.56253 0.11996 3.46460 22 - -
14809 1.38629 1.38629 1.38629 1.38629
14810 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14811 23 2.93015 3.56253 0.11996 3.46460 23 - -
14812 1.38629 1.38629 1.38629 1.38629
14813 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14814 24 3.40451 0.13367 3.45517 2.80813 24 - -
14815 1.38629 1.38629 1.38629 1.38629
14816 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14817 25 0.14521 3.35547 2.78579 3.25479 25 - -
14818 1.38629 1.38629 1.38629 1.38629
14819 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14820 26 3.40451 0.13367 3.45517 2.80813 26 - -
14821 1.38629 1.38629 1.38629 1.38629
14822 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14823 27 2.93015 3.56253 0.11996 3.46460 27 - -
14824 1.38629 1.38629 1.38629 1.38629
14825 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14826 28 2.59719 1.60135 2.66254 0.42446 28 - -
14827 1.38629 1.38629 1.38629 1.38629
14828 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14829 29 3.40451 0.13367 3.45517 2.80813 29 - -
14830 1.38629 1.38629 1.38629 1.38629
14831 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14832 30 3.06365 2.57925 3.11275 0.18275 30 - -
14833 1.38629 1.38629 1.38629 1.38629
14834 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14835 31 2.93015 3.56253 0.11996 3.46460 31 - -
14836 1.38629 1.38629 1.38629 1.38629
14837 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14838 32 3.40451 0.13367 3.45517 2.80813 32 - -
14839 1.38629 1.38629 1.38629 1.38629
14840 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14841 33 3.40451 0.13367 3.45517 2.80813 33 - -
14842 1.38629 1.38629 1.38629 1.38629
14843 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14844 34 3.06365 2.57925 3.11275 0.18275 34 - -
14845 1.38629 1.38629 1.38629 1.38629
14846 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14847 35 2.93015 3.56253 0.11996 3.46460 35 - -
14848 1.38629 1.38629 1.38629 1.38629
14849 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14850 36 2.93015 3.56253 0.11996 3.46460 36 - -
14851 1.38629 1.38629 1.38629 1.38629
14852 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14853 37 2.93015 3.56253 0.11996 3.46460 37 - -
14854 1.38629 1.38629 1.38629 1.38629
14855 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14856 38 3.40451 0.13367 3.45517 2.80813 38 - -
14857 1.38629 1.38629 1.38629 1.38629
14858 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14859 39 2.93015 3.56253 0.11996 3.46460 39 - -
14860 1.38629 1.38629 1.38629 1.38629
14861 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14862 40 3.06365 2.57925 3.11275 0.18275 40 - -
14863 1.38629 1.38629 1.38629 1.38629
14864 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14865 41 3.40451 0.13367 3.45517 2.80813 41 - -
14866 1.38629 1.38629 1.38629 1.38629
14867 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14868 42 0.14521 3.35547 2.78579 3.25479 42 - -
14869 1.38629 1.38629 1.38629 1.38629
14870 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14871 43 3.40451 0.13367 3.45517 2.80813 43 - -
14872 1.38629 1.38629 1.38629 1.38629
14873 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14874 44 2.93015 3.56253 0.11996 3.46460 44 - -
14875 1.38629 1.38629 1.38629 1.38629
14876 0.03741 3.99751 3.99751 1.46634 0.26236 1.09861 0.40547
14877 45 3.40451 0.13367 3.45517 2.80813 45 - -
14878 1.38629 1.38629 1.38629 1.38629
14879 0.01888 3.97897 * 1.46634 0.26236 0.00000 *
14880 //
14881 HMMER3/b [3.0 | March 2010]
14882 NAME 2_5.8_Tracheophyta_58S_start_eight_long
14883 LENG 45
14884 ALPH DNA
14885 RF no
14886 CS no
14887 MAP yes
14888 DATE Fri Feb 17 16:00:21 2012
14889 NSEQ 18
14890 EFFN 3.300293
14891 CKSUM 3900505399
14892 STATS LOCAL MSV -8.0180 0.71934
14893 STATS LOCAL VITERBI -7.6250 0.71934
14894 STATS LOCAL FORWARD -4.2046 0.71934
14895 HMM A C G T
14896 m->m m->i m->d i->m i->i d->m d->d
14897 COMPO 1.40393 1.38116 1.37967 1.38063
14898 1.38629 1.38629 1.38629 1.38629
14899 0.03704 4.00739 4.00739 1.46634 0.26236 0.00000 *
14900 1 3.08135 2.59052 3.12978 0.17985 1 - -
14901 1.38629 1.38629 1.38629 1.38629
14902 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14903 2 2.94250 3.58045 0.11796 3.48436 2 - -
14904 1.38629 1.38629 1.38629 1.38629
14905 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14906 3 0.14285 3.37307 2.79725 3.27405 3 - -
14907 1.38629 1.38629 1.38629 1.38629
14908 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14909 4 3.42482 0.13120 3.47463 2.82296 4 - -
14910 1.38629 1.38629 1.38629 1.38629
14911 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14912 5 3.08135 2.59052 3.12978 0.17985 5 - -
14913 1.38629 1.38629 1.38629 1.38629
14914 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14915 6 3.42482 0.13120 3.47463 2.82296 6 - -
14916 1.38629 1.38629 1.38629 1.38629
14917 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14918 7 3.08135 2.59052 3.12978 0.17985 7 - -
14919 1.38629 1.38629 1.38629 1.38629
14920 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14921 8 3.42482 0.13120 3.47463 2.82296 8 - -
14922 1.38629 1.38629 1.38629 1.38629
14923 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14924 9 2.94250 3.58045 0.11796 3.48436 9 - -
14925 1.38629 1.38629 1.38629 1.38629
14926 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14927 10 2.94250 3.58045 0.11796 3.48436 10 - -
14928 1.38629 1.38629 1.38629 1.38629
14929 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14930 11 3.42482 0.13120 3.47463 2.82296 11 - -
14931 1.38629 1.38629 1.38629 1.38629
14932 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14933 12 0.14285 3.37307 2.79725 3.27405 12 - -
14934 1.38629 1.38629 1.38629 1.38629
14935 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14936 13 0.14285 3.37307 2.79725 3.27405 13 - -
14937 1.38629 1.38629 1.38629 1.38629
14938 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14939 14 2.71603 1.81090 2.77762 0.34507 14 - -
14940 1.38629 1.38629 1.38629 1.38629
14941 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14942 15 2.94250 3.58045 0.11796 3.48436 15 - -
14943 1.38629 1.38629 1.38629 1.38629
14944 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14945 16 2.94250 3.58045 0.11796 3.48436 16 - -
14946 1.38629 1.38629 1.38629 1.38629
14947 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14948 17 0.14285 3.37307 2.79725 3.27405 17 - -
14949 1.38629 1.38629 1.38629 1.38629
14950 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14951 18 3.08135 2.59052 3.12978 0.17985 18 - -
14952 1.38629 1.38629 1.38629 1.38629
14953 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14954 19 0.14285 3.37307 2.79725 3.27405 19 - -
14955 1.38629 1.38629 1.38629 1.38629
14956 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14957 20 3.08135 2.59052 3.12978 0.17985 20 - -
14958 1.38629 1.38629 1.38629 1.38629
14959 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14960 21 3.42482 0.13120 3.47463 2.82296 21 - -
14961 1.38629 1.38629 1.38629 1.38629
14962 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14963 22 3.08135 2.59052 3.12978 0.17985 22 - -
14964 1.38629 1.38629 1.38629 1.38629
14965 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14966 23 3.42482 0.13120 3.47463 2.82296 23 - -
14967 1.38629 1.38629 1.38629 1.38629
14968 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14969 24 2.94250 3.58045 0.11796 3.48436 24 - -
14970 1.38629 1.38629 1.38629 1.38629
14971 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14972 25 2.94250 3.58045 0.11796 3.48436 25 - -
14973 1.38629 1.38629 1.38629 1.38629
14974 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14975 26 3.42482 0.13120 3.47463 2.82296 26 - -
14976 1.38629 1.38629 1.38629 1.38629
14977 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14978 27 3.08135 2.59052 3.12978 0.17985 27 - -
14979 1.38629 1.38629 1.38629 1.38629
14980 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14981 28 3.42482 0.13120 3.47463 2.82296 28 - -
14982 1.38629 1.38629 1.38629 1.38629
14983 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14984 29 3.08135 2.59052 3.12978 0.17985 29 - -
14985 1.38629 1.38629 1.38629 1.38629
14986 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14987 30 3.08135 2.59052 3.12978 0.17985 30 - -
14988 1.38629 1.38629 1.38629 1.38629
14989 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14990 31 2.94250 3.58045 0.11796 3.48436 31 - -
14991 1.38629 1.38629 1.38629 1.38629
14992 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14993 32 3.42482 0.13120 3.47463 2.82296 32 - -
14994 1.38629 1.38629 1.38629 1.38629
14995 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14996 33 0.14285 3.37307 2.79725 3.27405 33 - -
14997 1.38629 1.38629 1.38629 1.38629
14998 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
14999 34 3.08135 2.59052 3.12978 0.17985 34 - -
15000 1.38629 1.38629 1.38629 1.38629
15001 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15002 35 3.42482 0.13120 3.47463 2.82296 35 - -
15003 1.38629 1.38629 1.38629 1.38629
15004 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15005 36 2.94250 3.58045 0.11796 3.48436 36 - -
15006 1.38629 1.38629 1.38629 1.38629
15007 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15008 37 0.14285 3.37307 2.79725 3.27405 37 - -
15009 1.38629 1.38629 1.38629 1.38629
15010 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15011 38 3.08135 2.59052 3.12978 0.17985 38 - -
15012 1.38629 1.38629 1.38629 1.38629
15013 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15014 39 2.94250 3.58045 0.11796 3.48436 39 - -
15015 1.38629 1.38629 1.38629 1.38629
15016 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15017 40 0.14285 3.37307 2.79725 3.27405 40 - -
15018 1.38629 1.38629 1.38629 1.38629
15019 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15020 41 0.14285 3.37307 2.79725 3.27405 41 - -
15021 1.38629 1.38629 1.38629 1.38629
15022 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15023 42 2.94250 3.58045 0.11796 3.48436 42 - -
15024 1.38629 1.38629 1.38629 1.38629
15025 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15026 43 0.14285 3.37307 2.79725 3.27405 43 - -
15027 1.38629 1.38629 1.38629 1.38629
15028 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15029 44 0.14285 3.37307 2.79725 3.27405 44 - -
15030 1.38629 1.38629 1.38629 1.38629
15031 0.03704 4.00739 4.00739 1.46634 0.26236 1.09861 0.40547
15032 45 3.42482 0.13120 3.47463 2.82296 45 - -
15033 1.38629 1.38629 1.38629 1.38629
15034 0.01869 3.98904 * 1.46634 0.26236 0.00000 *
15035 //
15036 HMMER3/b [3.0 | March 2010]
15037 NAME 2_5.8_Tracheophyta_58S_start_elevena_long
15038 LENG 45
15039 ALPH DNA
15040 RF no
15041 CS no
15042 MAP yes
15043 DATE Fri Feb 17 16:15:03 2012
15044 NSEQ 5
15045 EFFN 3.198242
15046 CKSUM 492245523
15047 STATS LOCAL MSV -8.0269 0.71932
15048 STATS LOCAL VITERBI -7.6136 0.71932
15049 STATS LOCAL FORWARD -3.7504 0.71932
15050 HMM A C G T
15051 m->m m->i m->d i->m i->i d->m d->d
15052 COMPO 1.34311 1.20704 1.45350 1.57922
15053 1.38629 1.38629 1.38629 1.38629
15054 0.03775 3.98866 3.98866 1.46634 0.26236 0.00000 *
15055 1 3.38618 0.13595 3.43760 2.79470 1 - -
15056 1.38629 1.38629 1.38629 1.38629
15057 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15058 2 2.91894 3.54631 0.12180 3.44673 2 - -
15059 1.38629 1.38629 1.38629 1.38629
15060 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15061 3 0.14739 3.33958 2.77542 3.23743 3 - -
15062 1.38629 1.38629 1.38629 1.38629
15063 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15064 4 3.38618 0.13595 3.43760 2.79470 4 - -
15065 1.38629 1.38629 1.38629 1.38629
15066 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15067 5 3.04773 2.56910 3.09744 0.18541 5 - -
15068 1.38629 1.38629 1.38629 1.38629
15069 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15070 6 3.38618 0.13595 3.43760 2.79470 6 - -
15071 1.38629 1.38629 1.38629 1.38629
15072 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15073 7 3.04773 2.56910 3.09744 0.18541 7 - -
15074 1.38629 1.38629 1.38629 1.38629
15075 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15076 8 3.38618 0.13595 3.43760 2.79470 8 - -
15077 1.38629 1.38629 1.38629 1.38629
15078 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15079 9 2.91894 3.54631 0.12180 3.44673 9 - -
15080 1.38629 1.38629 1.38629 1.38629
15081 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15082 10 0.14739 3.33958 2.77542 3.23743 10 - -
15083 1.38629 1.38629 1.38629 1.38629
15084 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15085 11 3.38618 0.13595 3.43760 2.79470 11 - -
15086 1.38629 1.38629 1.38629 1.38629
15087 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15088 12 0.14739 3.33958 2.77542 3.23743 12 - -
15089 1.38629 1.38629 1.38629 1.38629
15090 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15091 13 0.14739 3.33958 2.77542 3.23743 13 - -
15092 1.38629 1.38629 1.38629 1.38629
15093 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15094 14 3.38618 0.13595 3.43760 2.79470 14 - -
15095 1.38629 1.38629 1.38629 1.38629
15096 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15097 15 2.91894 3.54631 0.12180 3.44673 15 - -
15098 1.38629 1.38629 1.38629 1.38629
15099 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15100 16 2.91894 3.54631 0.12180 3.44673 16 - -
15101 1.38629 1.38629 1.38629 1.38629
15102 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15103 17 0.14739 3.33958 2.77542 3.23743 17 - -
15104 1.38629 1.38629 1.38629 1.38629
15105 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15106 18 3.04773 2.56910 3.09744 0.18541 18 - -
15107 1.38629 1.38629 1.38629 1.38629
15108 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15109 19 0.14739 3.33958 2.77542 3.23743 19 - -
15110 1.38629 1.38629 1.38629 1.38629
15111 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15112 20 3.04773 2.56910 3.09744 0.18541 20 - -
15113 1.38629 1.38629 1.38629 1.38629
15114 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15115 21 3.38618 0.13595 3.43760 2.79470 21 - -
15116 1.38629 1.38629 1.38629 1.38629
15117 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15118 22 3.04773 2.56910 3.09744 0.18541 22 - -
15119 1.38629 1.38629 1.38629 1.38629
15120 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15121 23 3.38618 0.13595 3.43760 2.79470 23 - -
15122 1.38629 1.38629 1.38629 1.38629
15123 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15124 24 2.91894 3.54631 0.12180 3.44673 24 - -
15125 1.38629 1.38629 1.38629 1.38629
15126 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15127 25 2.91894 3.54631 0.12180 3.44673 25 - -
15128 1.38629 1.38629 1.38629 1.38629
15129 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15130 26 3.38618 0.13595 3.43760 2.79470 26 - -
15131 1.38629 1.38629 1.38629 1.38629
15132 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15133 27 3.04773 2.56910 3.09744 0.18541 27 - -
15134 1.38629 1.38629 1.38629 1.38629
15135 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15136 28 3.38618 0.13595 3.43760 2.79470 28 - -
15137 1.38629 1.38629 1.38629 1.38629
15138 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15139 29 3.04773 2.56910 3.09744 0.18541 29 - -
15140 1.38629 1.38629 1.38629 1.38629
15141 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15142 30 3.38618 0.13595 3.43760 2.79470 30 - -
15143 1.38629 1.38629 1.38629 1.38629
15144 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15145 31 2.91894 3.54631 0.12180 3.44673 31 - -
15146 1.38629 1.38629 1.38629 1.38629
15147 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15148 32 3.38618 0.13595 3.43760 2.79470 32 - -
15149 1.38629 1.38629 1.38629 1.38629
15150 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15151 33 0.14739 3.33958 2.77542 3.23743 33 - -
15152 1.38629 1.38629 1.38629 1.38629
15153 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15154 34 3.04773 2.56910 3.09744 0.18541 34 - -
15155 1.38629 1.38629 1.38629 1.38629
15156 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15157 35 3.38618 0.13595 3.43760 2.79470 35 - -
15158 1.38629 1.38629 1.38629 1.38629
15159 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15160 36 2.91894 3.54631 0.12180 3.44673 36 - -
15161 1.38629 1.38629 1.38629 1.38629
15162 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15163 37 0.14739 3.33958 2.77542 3.23743 37 - -
15164 1.38629 1.38629 1.38629 1.38629
15165 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15166 38 3.04773 2.56910 3.09744 0.18541 38 - -
15167 1.38629 1.38629 1.38629 1.38629
15168 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15169 39 2.91894 3.54631 0.12180 3.44673 39 - -
15170 1.38629 1.38629 1.38629 1.38629
15171 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15172 40 0.14739 3.33958 2.77542 3.23743 40 - -
15173 1.38629 1.38629 1.38629 1.38629
15174 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15175 41 0.14739 3.33958 2.77542 3.23743 41 - -
15176 1.38629 1.38629 1.38629 1.38629
15177 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15178 42 2.91894 3.54631 0.12180 3.44673 42 - -
15179 1.38629 1.38629 1.38629 1.38629
15180 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15181 43 0.14739 3.33958 2.77542 3.23743 43 - -
15182 1.38629 1.38629 1.38629 1.38629
15183 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15184 44 0.14739 3.33958 2.77542 3.23743 44 - -
15185 1.38629 1.38629 1.38629 1.38629
15186 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
15187 45 3.38618 0.13595 3.43760 2.79470 45 - -
15188 1.38629 1.38629 1.38629 1.38629
15189 0.01905 3.96996 * 1.46634 0.26236 0.00000 *
15190 //
15191 HMMER3/b [3.0 | March 2010]
15192 NAME 2_5.8_Tracheophyta_58S_start_elevenb_long
15193 LENG 45
15194 ALPH DNA
15195 RF no
15196 CS no
15197 MAP yes
15198 DATE Fri Feb 17 16:15:08 2012
15199 NSEQ 6
15200 EFFN 3.249023
15201 CKSUM 1930426942
15202 STATS LOCAL MSV -8.0932 0.71932
15203 STATS LOCAL VITERBI -7.5450 0.71932
15204 STATS LOCAL FORWARD -4.0595 0.71932
15205 HMM A C G T
15206 m->m m->i m->d i->m i->i d->m d->d
15207 COMPO 1.27768 1.39135 1.44912 1.43632
15208 1.38629 1.38629 1.38629 1.38629
15209 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 *
15210 1 3.06457 2.57984 3.11364 0.18260 1 - -
15211 1.38629 1.38629 1.38629 1.38629
15212 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15213 2 2.93080 3.56347 0.11985 3.46564 2 - -
15214 1.38629 1.38629 1.38629 1.38629
15215 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15216 3 0.14509 3.35639 2.78639 3.25580 3 - -
15217 1.38629 1.38629 1.38629 1.38629
15218 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15219 4 3.40558 0.13354 3.45619 2.80891 4 - -
15220 1.38629 1.38629 1.38629 1.38629
15221 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15222 5 3.06457 2.57984 3.11364 0.18260 5 - -
15223 1.38629 1.38629 1.38629 1.38629
15224 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15225 6 3.40558 0.13354 3.45619 2.80891 6 - -
15226 1.38629 1.38629 1.38629 1.38629
15227 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15228 7 3.06457 2.57984 3.11364 0.18260 7 - -
15229 1.38629 1.38629 1.38629 1.38629
15230 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15231 8 3.40558 0.13354 3.45619 2.80891 8 - -
15232 1.38629 1.38629 1.38629 1.38629
15233 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15234 9 2.93080 3.56347 0.11985 3.46564 9 - -
15235 1.38629 1.38629 1.38629 1.38629
15236 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15237 10 0.14509 3.35639 2.78639 3.25580 10 - -
15238 1.38629 1.38629 1.38629 1.38629
15239 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15240 11 3.40558 0.13354 3.45619 2.80891 11 - -
15241 1.38629 1.38629 1.38629 1.38629
15242 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15243 12 0.14509 3.35639 2.78639 3.25580 12 - -
15244 1.38629 1.38629 1.38629 1.38629
15245 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15246 13 0.14509 3.35639 2.78639 3.25580 13 - -
15247 1.38629 1.38629 1.38629 1.38629
15248 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15249 14 3.40558 0.13354 3.45619 2.80891 14 - -
15250 1.38629 1.38629 1.38629 1.38629
15251 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15252 15 2.93080 3.56347 0.11985 3.46564 15 - -
15253 1.38629 1.38629 1.38629 1.38629
15254 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15255 16 2.93080 3.56347 0.11985 3.46564 16 - -
15256 1.38629 1.38629 1.38629 1.38629
15257 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15258 17 0.14509 3.35639 2.78639 3.25580 17 - -
15259 1.38629 1.38629 1.38629 1.38629
15260 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15261 18 3.06457 2.57984 3.11364 0.18260 18 - -
15262 1.38629 1.38629 1.38629 1.38629
15263 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15264 19 0.14509 3.35639 2.78639 3.25580 19 - -
15265 1.38629 1.38629 1.38629 1.38629
15266 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15267 20 3.06457 2.57984 3.11364 0.18260 20 - -
15268 1.38629 1.38629 1.38629 1.38629
15269 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15270 21 3.40558 0.13354 3.45619 2.80891 21 - -
15271 1.38629 1.38629 1.38629 1.38629
15272 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15273 22 3.06457 2.57984 3.11364 0.18260 22 - -
15274 1.38629 1.38629 1.38629 1.38629
15275 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15276 23 0.14509 3.35639 2.78639 3.25580 23 - -
15277 1.38629 1.38629 1.38629 1.38629
15278 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15279 24 2.93080 3.56347 0.11985 3.46564 24 - -
15280 1.38629 1.38629 1.38629 1.38629
15281 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15282 25 2.93080 3.56347 0.11985 3.46564 25 - -
15283 1.38629 1.38629 1.38629 1.38629
15284 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15285 26 3.40558 0.13354 3.45619 2.80891 26 - -
15286 1.38629 1.38629 1.38629 1.38629
15287 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15288 27 3.06457 2.57984 3.11364 0.18260 27 - -
15289 1.38629 1.38629 1.38629 1.38629
15290 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15291 28 3.40558 0.13354 3.45619 2.80891 28 - -
15292 1.38629 1.38629 1.38629 1.38629
15293 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15294 29 3.06457 2.57984 3.11364 0.18260 29 - -
15295 1.38629 1.38629 1.38629 1.38629
15296 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15297 30 3.06457 2.57984 3.11364 0.18260 30 - -
15298 1.38629 1.38629 1.38629 1.38629
15299 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15300 31 2.93080 3.56347 0.11985 3.46564 31 - -
15301 1.38629 1.38629 1.38629 1.38629
15302 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15303 32 3.40558 0.13354 3.45619 2.80891 32 - -
15304 1.38629 1.38629 1.38629 1.38629
15305 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15306 33 0.14509 3.35639 2.78639 3.25580 33 - -
15307 1.38629 1.38629 1.38629 1.38629
15308 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15309 34 3.06457 2.57984 3.11364 0.18260 34 - -
15310 1.38629 1.38629 1.38629 1.38629
15311 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15312 35 3.40558 0.13354 3.45619 2.80891 35 - -
15313 1.38629 1.38629 1.38629 1.38629
15314 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15315 36 2.93080 3.56347 0.11985 3.46564 36 - -
15316 1.38629 1.38629 1.38629 1.38629
15317 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15318 37 0.14509 3.35639 2.78639 3.25580 37 - -
15319 1.38629 1.38629 1.38629 1.38629
15320 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15321 38 3.06457 2.57984 3.11364 0.18260 38 - -
15322 1.38629 1.38629 1.38629 1.38629
15323 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15324 39 2.93080 3.56347 0.11985 3.46564 39 - -
15325 1.38629 1.38629 1.38629 1.38629
15326 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15327 40 0.14509 3.35639 2.78639 3.25580 40 - -
15328 1.38629 1.38629 1.38629 1.38629
15329 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15330 41 0.14509 3.35639 2.78639 3.25580 41 - -
15331 1.38629 1.38629 1.38629 1.38629
15332 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15333 42 2.93080 3.56347 0.11985 3.46564 42 - -
15334 1.38629 1.38629 1.38629 1.38629
15335 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15336 43 0.14509 3.35639 2.78639 3.25580 43 - -
15337 1.38629 1.38629 1.38629 1.38629
15338 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15339 44 0.14509 3.35639 2.78639 3.25580 44 - -
15340 1.38629 1.38629 1.38629 1.38629
15341 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547
15342 45 3.40558 0.13354 3.45619 2.80891 45 - -
15343 1.38629 1.38629 1.38629 1.38629
15344 0.01887 3.97950 * 1.46634 0.26236 0.00000 *
15345 //
15346 HMMER3/b [3.0 | March 2010]
15347 NAME 2_5.8_Tracheophyta_58S_start_elevenc_long
15348 LENG 45
15349 ALPH DNA
15350 RF no
15351 CS no
15352 MAP yes
15353 DATE Fri Feb 17 16:15:15 2012
15354 NSEQ 4
15355 EFFN 3.175781
15356 CKSUM 329736315
15357 STATS LOCAL MSV -8.1238 0.71932
15358 STATS LOCAL VITERBI -7.6526 0.71932
15359 STATS LOCAL FORWARD -3.7764 0.71932
15360 HMM A C G T
15361 m->m m->i m->d i->m i->i d->m d->d
15362 COMPO 1.34425 1.15438 1.45439 1.65827
15363 1.38629 1.38629 1.38629 1.38629
15364 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
15365 1 3.37748 0.13704 3.42926 2.78832 1 - -
15366 1.38629 1.38629 1.38629 1.38629
15367 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15368 2 2.91360 3.53861 0.12268 3.43825 2 - -
15369 1.38629 1.38629 1.38629 1.38629
15370 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15371 3 0.14843 3.33206 2.77050 3.22920 3 - -
15372 1.38629 1.38629 1.38629 1.38629
15373 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15374 4 3.37748 0.13704 3.42926 2.78832 4 - -
15375 1.38629 1.38629 1.38629 1.38629
15376 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15377 5 3.04021 2.56430 3.09020 0.18668 5 - -
15378 1.38629 1.38629 1.38629 1.38629
15379 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15380 6 3.37748 0.13704 3.42926 2.78832 6 - -
15381 1.38629 1.38629 1.38629 1.38629
15382 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15383 7 3.04021 2.56430 3.09020 0.18668 7 - -
15384 1.38629 1.38629 1.38629 1.38629
15385 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15386 8 3.37748 0.13704 3.42926 2.78832 8 - -
15387 1.38629 1.38629 1.38629 1.38629
15388 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15389 9 2.91360 3.53861 0.12268 3.43825 9 - -
15390 1.38629 1.38629 1.38629 1.38629
15391 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15392 10 0.14843 3.33206 2.77050 3.22920 10 - -
15393 1.38629 1.38629 1.38629 1.38629
15394 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15395 11 3.37748 0.13704 3.42926 2.78832 11 - -
15396 1.38629 1.38629 1.38629 1.38629
15397 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15398 12 0.14843 3.33206 2.77050 3.22920 12 - -
15399 1.38629 1.38629 1.38629 1.38629
15400 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15401 13 0.14843 3.33206 2.77050 3.22920 13 - -
15402 1.38629 1.38629 1.38629 1.38629
15403 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15404 14 3.37748 0.13704 3.42926 2.78832 14 - -
15405 1.38629 1.38629 1.38629 1.38629
15406 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15407 15 2.91360 3.53861 0.12268 3.43825 15 - -
15408 1.38629 1.38629 1.38629 1.38629
15409 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15410 16 2.91360 3.53861 0.12268 3.43825 16 - -
15411 1.38629 1.38629 1.38629 1.38629
15412 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15413 17 0.14843 3.33206 2.77050 3.22920 17 - -
15414 1.38629 1.38629 1.38629 1.38629
15415 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15416 18 3.04021 2.56430 3.09020 0.18668 18 - -
15417 1.38629 1.38629 1.38629 1.38629
15418 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15419 19 0.14843 3.33206 2.77050 3.22920 19 - -
15420 1.38629 1.38629 1.38629 1.38629
15421 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15422 20 3.04021 2.56430 3.09020 0.18668 20 - -
15423 1.38629 1.38629 1.38629 1.38629
15424 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15425 21 3.37748 0.13704 3.42926 2.78832 21 - -
15426 1.38629 1.38629 1.38629 1.38629
15427 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15428 22 3.37748 0.13704 3.42926 2.78832 22 - -
15429 1.38629 1.38629 1.38629 1.38629
15430 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15431 23 3.37748 0.13704 3.42926 2.78832 23 - -
15432 1.38629 1.38629 1.38629 1.38629
15433 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15434 24 2.91360 3.53861 0.12268 3.43825 24 - -
15435 1.38629 1.38629 1.38629 1.38629
15436 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15437 25 2.91360 3.53861 0.12268 3.43825 25 - -
15438 1.38629 1.38629 1.38629 1.38629
15439 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15440 26 3.37748 0.13704 3.42926 2.78832 26 - -
15441 1.38629 1.38629 1.38629 1.38629
15442 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15443 27 3.04021 2.56430 3.09020 0.18668 27 - -
15444 1.38629 1.38629 1.38629 1.38629
15445 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15446 28 3.37748 0.13704 3.42926 2.78832 28 - -
15447 1.38629 1.38629 1.38629 1.38629
15448 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15449 29 3.04021 2.56430 3.09020 0.18668 29 - -
15450 1.38629 1.38629 1.38629 1.38629
15451 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15452 30 3.37748 0.13704 3.42926 2.78832 30 - -
15453 1.38629 1.38629 1.38629 1.38629
15454 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15455 31 2.91360 3.53861 0.12268 3.43825 31 - -
15456 1.38629 1.38629 1.38629 1.38629
15457 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15458 32 3.37748 0.13704 3.42926 2.78832 32 - -
15459 1.38629 1.38629 1.38629 1.38629
15460 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15461 33 0.14843 3.33206 2.77050 3.22920 33 - -
15462 1.38629 1.38629 1.38629 1.38629
15463 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15464 34 3.04021 2.56430 3.09020 0.18668 34 - -
15465 1.38629 1.38629 1.38629 1.38629
15466 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15467 35 3.37748 0.13704 3.42926 2.78832 35 - -
15468 1.38629 1.38629 1.38629 1.38629
15469 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15470 36 2.91360 3.53861 0.12268 3.43825 36 - -
15471 1.38629 1.38629 1.38629 1.38629
15472 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15473 37 0.14843 3.33206 2.77050 3.22920 37 - -
15474 1.38629 1.38629 1.38629 1.38629
15475 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15476 38 3.04021 2.56430 3.09020 0.18668 38 - -
15477 1.38629 1.38629 1.38629 1.38629
15478 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15479 39 2.91360 3.53861 0.12268 3.43825 39 - -
15480 1.38629 1.38629 1.38629 1.38629
15481 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15482 40 0.14843 3.33206 2.77050 3.22920 40 - -
15483 1.38629 1.38629 1.38629 1.38629
15484 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15485 41 0.14843 3.33206 2.77050 3.22920 41 - -
15486 1.38629 1.38629 1.38629 1.38629
15487 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15488 42 2.91360 3.53861 0.12268 3.43825 42 - -
15489 1.38629 1.38629 1.38629 1.38629
15490 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15491 43 0.14843 3.33206 2.77050 3.22920 43 - -
15492 1.38629 1.38629 1.38629 1.38629
15493 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15494 44 0.14843 3.33206 2.77050 3.22920 44 - -
15495 1.38629 1.38629 1.38629 1.38629
15496 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
15497 45 3.37748 0.13704 3.42926 2.78832 45 - -
15498 1.38629 1.38629 1.38629 1.38629
15499 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
15500 //
15501 HMMER3/b [3.0 | March 2010]
15502 NAME 2_5.8_Tracheophyta_58S_start_elevend_long
15503 LENG 45
15504 ALPH DNA
15505 RF no
15506 CS no
15507 MAP yes
15508 DATE Fri Feb 17 16:15:21 2012
15509 NSEQ 5
15510 EFFN 3.413086
15511 CKSUM 4236102742
15512 STATS LOCAL MSV -7.4888 0.71931
15513 STATS LOCAL VITERBI -7.5745 0.71931
15514 STATS LOCAL FORWARD -4.1218 0.71931
15515 HMM A C G T
15516 m->m m->i m->d i->m i->i d->m d->d
15517 COMPO 1.40009 1.35456 1.43150 1.36096
15518 1.38629 1.38629 1.38629 1.38629
15519 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 *
15520 1 3.11748 2.61349 3.16453 0.17409 1 - -
15521 1.38629 1.38629 1.38629 1.38629
15522 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15523 2 2.96731 3.61661 0.11405 3.52429 2 - -
15524 1.38629 1.38629 1.38629 1.38629
15525 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15526 3 0.13819 3.40877 2.82041 3.31315 3 - -
15527 1.38629 1.38629 1.38629 1.38629
15528 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15529 4 3.46593 0.12636 3.51399 2.85283 4 - -
15530 1.38629 1.38629 1.38629 1.38629
15531 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15532 5 3.11748 2.61349 3.16453 0.17409 5 - -
15533 1.38629 1.38629 1.38629 1.38629
15534 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15535 6 3.46593 0.12636 3.51399 2.85283 6 - -
15536 1.38629 1.38629 1.38629 1.38629
15537 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15538 7 3.11748 2.61349 3.16453 0.17409 7 - -
15539 1.38629 1.38629 1.38629 1.38629
15540 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15541 8 3.46593 0.12636 3.51399 2.85283 8 - -
15542 1.38629 1.38629 1.38629 1.38629
15543 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15544 9 2.96731 3.61661 0.11405 3.52429 9 - -
15545 1.38629 1.38629 1.38629 1.38629
15546 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15547 10 2.96731 3.61661 0.11405 3.52429 10 - -
15548 1.38629 1.38629 1.38629 1.38629
15549 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15550 11 3.46593 0.12636 3.51399 2.85283 11 - -
15551 1.38629 1.38629 1.38629 1.38629
15552 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15553 12 0.13819 3.40877 2.82041 3.31315 12 - -
15554 1.38629 1.38629 1.38629 1.38629
15555 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15556 13 0.13819 3.40877 2.82041 3.31315 13 - -
15557 1.38629 1.38629 1.38629 1.38629
15558 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15559 14 3.46593 0.12636 3.51399 2.85283 14 - -
15560 1.38629 1.38629 1.38629 1.38629
15561 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15562 15 2.96731 3.61661 0.11405 3.52429 15 - -
15563 1.38629 1.38629 1.38629 1.38629
15564 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15565 16 2.96731 3.61661 0.11405 3.52429 16 - -
15566 1.38629 1.38629 1.38629 1.38629
15567 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15568 17 0.13819 3.40877 2.82041 3.31315 17 - -
15569 1.38629 1.38629 1.38629 1.38629
15570 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15571 18 3.11748 2.61349 3.16453 0.17409 18 - -
15572 1.38629 1.38629 1.38629 1.38629
15573 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15574 19 0.13819 3.40877 2.82041 3.31315 19 - -
15575 1.38629 1.38629 1.38629 1.38629
15576 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15577 20 3.11748 2.61349 3.16453 0.17409 20 - -
15578 1.38629 1.38629 1.38629 1.38629
15579 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15580 21 3.46593 0.12636 3.51399 2.85283 21 - -
15581 1.38629 1.38629 1.38629 1.38629
15582 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15583 22 3.11748 2.61349 3.16453 0.17409 22 - -
15584 1.38629 1.38629 1.38629 1.38629
15585 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15586 23 3.11748 2.61349 3.16453 0.17409 23 - -
15587 1.38629 1.38629 1.38629 1.38629
15588 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15589 24 2.10789 0.81520 1.20364 1.99617 24 - -
15590 1.38629 1.38629 1.38629 1.38629
15591 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15592 25 2.96731 3.61661 0.11405 3.52429 25 - -
15593 1.38629 1.38629 1.38629 1.38629
15594 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15595 26 3.46593 0.12636 3.51399 2.85283 26 - -
15596 1.38629 1.38629 1.38629 1.38629
15597 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15598 27 3.11748 2.61349 3.16453 0.17409 27 - -
15599 1.38629 1.38629 1.38629 1.38629
15600 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15601 28 3.46593 0.12636 3.51399 2.85283 28 - -
15602 1.38629 1.38629 1.38629 1.38629
15603 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15604 29 3.11748 2.61349 3.16453 0.17409 29 - -
15605 1.38629 1.38629 1.38629 1.38629
15606 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15607 30 3.11748 2.61349 3.16453 0.17409 30 - -
15608 1.38629 1.38629 1.38629 1.38629
15609 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15610 31 2.96731 3.61661 0.11405 3.52429 31 - -
15611 1.38629 1.38629 1.38629 1.38629
15612 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15613 32 3.46593 0.12636 3.51399 2.85283 32 - -
15614 1.38629 1.38629 1.38629 1.38629
15615 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15616 33 0.13819 3.40877 2.82041 3.31315 33 - -
15617 1.38629 1.38629 1.38629 1.38629
15618 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15619 34 3.11748 2.61349 3.16453 0.17409 34 - -
15620 1.38629 1.38629 1.38629 1.38629
15621 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15622 35 3.46593 0.12636 3.51399 2.85283 35 - -
15623 1.38629 1.38629 1.38629 1.38629
15624 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15625 36 2.96731 3.61661 0.11405 3.52429 36 - -
15626 1.38629 1.38629 1.38629 1.38629
15627 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15628 37 0.13819 3.40877 2.82041 3.31315 37 - -
15629 1.38629 1.38629 1.38629 1.38629
15630 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15631 38 3.11748 2.61349 3.16453 0.17409 38 - -
15632 1.38629 1.38629 1.38629 1.38629
15633 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15634 39 2.96731 3.61661 0.11405 3.52429 39 - -
15635 1.38629 1.38629 1.38629 1.38629
15636 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15637 40 0.13819 3.40877 2.82041 3.31315 40 - -
15638 1.38629 1.38629 1.38629 1.38629
15639 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15640 41 0.13819 3.40877 2.82041 3.31315 41 - -
15641 1.38629 1.38629 1.38629 1.38629
15642 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15643 42 2.96731 3.61661 0.11405 3.52429 42 - -
15644 1.38629 1.38629 1.38629 1.38629
15645 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15646 43 0.13819 3.40877 2.82041 3.31315 43 - -
15647 1.38629 1.38629 1.38629 1.38629
15648 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15649 44 0.13819 3.40877 2.82041 3.31315 44 - -
15650 1.38629 1.38629 1.38629 1.38629
15651 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547
15652 45 3.46593 0.12636 3.51399 2.85283 45 - -
15653 1.38629 1.38629 1.38629 1.38629
15654 0.01831 4.00971 * 1.46634 0.26236 0.00000 *
15655 //
15656 HMMER3/b [3.0 | March 2010]
15657 NAME 2_5.8_Tracheophyta_58S_start_elevene_long
15658 LENG 45
15659 ALPH DNA
15660 RF no
15661 CS no
15662 MAP yes
15663 DATE Fri Feb 17 16:15:26 2012
15664 NSEQ 2
15665 EFFN 2.000000
15666 CKSUM 1433949084
15667 STATS LOCAL MSV -7.5231 0.72801
15668 STATS LOCAL VITERBI -8.1368 0.72801
15669 STATS LOCAL FORWARD -3.4187 0.72801
15670 HMM A C G T
15671 m->m m->i m->d i->m i->i d->m d->d
15672 COMPO 1.29217 1.29112 1.49927 1.48250
15673 1.38629 1.38629 1.38629 1.38629
15674 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
15675 1 2.57915 2.25909 2.64442 0.28946 1 - -
15676 1.38629 1.38629 1.38629 1.38629
15677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15678 2 2.53331 3.02441 0.20344 2.88069 2 - -
15679 1.38629 1.38629 1.38629 1.38629
15680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15681 3 0.23862 2.84929 2.43386 2.70756 3 - -
15682 1.38629 1.38629 1.38629 1.38629
15683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15684 4 2.81865 0.23582 2.88868 2.35662 4 - -
15685 1.38629 1.38629 1.38629 1.38629
15686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15687 5 2.57915 2.25909 2.64442 0.28946 5 - -
15688 1.38629 1.38629 1.38629 1.38629
15689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15690 6 2.81865 0.23582 2.88868 2.35662 6 - -
15691 1.38629 1.38629 1.38629 1.38629
15692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15693 7 2.57915 2.25909 2.64442 0.28946 7 - -
15694 1.38629 1.38629 1.38629 1.38629
15695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15696 8 2.81865 0.23582 2.88868 2.35662 8 - -
15697 1.38629 1.38629 1.38629 1.38629
15698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15699 9 2.53331 3.02441 0.20344 2.88069 9 - -
15700 1.38629 1.38629 1.38629 1.38629
15701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15702 10 0.23862 2.84929 2.43386 2.70756 10 - -
15703 1.38629 1.38629 1.38629 1.38629
15704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15705 11 2.81865 0.23582 2.88868 2.35662 11 - -
15706 1.38629 1.38629 1.38629 1.38629
15707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15708 12 0.23862 2.84929 2.43386 2.70756 12 - -
15709 1.38629 1.38629 1.38629 1.38629
15710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15711 13 0.23862 2.84929 2.43386 2.70756 13 - -
15712 1.38629 1.38629 1.38629 1.38629
15713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15714 14 2.81865 0.23582 2.88868 2.35662 14 - -
15715 1.38629 1.38629 1.38629 1.38629
15716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15717 15 0.23862 2.84929 2.43386 2.70756 15 - -
15718 1.38629 1.38629 1.38629 1.38629
15719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15720 16 2.53331 3.02441 0.20344 2.88069 16 - -
15721 1.38629 1.38629 1.38629 1.38629
15722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15723 17 0.23862 2.84929 2.43386 2.70756 17 - -
15724 1.38629 1.38629 1.38629 1.38629
15725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15726 18 2.57915 2.25909 2.64442 0.28946 18 - -
15727 1.38629 1.38629 1.38629 1.38629
15728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15729 19 0.23862 2.84929 2.43386 2.70756 19 - -
15730 1.38629 1.38629 1.38629 1.38629
15731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15732 20 2.57915 2.25909 2.64442 0.28946 20 - -
15733 1.38629 1.38629 1.38629 1.38629
15734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15735 21 2.81865 0.23582 2.88868 2.35662 21 - -
15736 1.38629 1.38629 1.38629 1.38629
15737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15738 22 2.57915 2.25909 2.64442 0.28946 22 - -
15739 1.38629 1.38629 1.38629 1.38629
15740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15741 23 2.81865 0.23582 2.88868 2.35662 23 - -
15742 1.38629 1.38629 1.38629 1.38629
15743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15744 24 2.53331 3.02441 0.20344 2.88069 24 - -
15745 1.38629 1.38629 1.38629 1.38629
15746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15747 25 2.53331 3.02441 0.20344 2.88069 25 - -
15748 1.38629 1.38629 1.38629 1.38629
15749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15750 26 2.81865 0.23582 2.88868 2.35662 26 - -
15751 1.38629 1.38629 1.38629 1.38629
15752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15753 27 2.57915 2.25909 2.64442 0.28946 27 - -
15754 1.38629 1.38629 1.38629 1.38629
15755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15756 28 2.81865 0.23582 2.88868 2.35662 28 - -
15757 1.38629 1.38629 1.38629 1.38629
15758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15759 29 2.57915 2.25909 2.64442 0.28946 29 - -
15760 1.38629 1.38629 1.38629 1.38629
15761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15762 30 2.81865 0.23582 2.88868 2.35662 30 - -
15763 1.38629 1.38629 1.38629 1.38629
15764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15765 31 2.53331 3.02441 0.20344 2.88069 31 - -
15766 1.38629 1.38629 1.38629 1.38629
15767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15768 32 2.81865 0.23582 2.88868 2.35662 32 - -
15769 1.38629 1.38629 1.38629 1.38629
15770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15771 33 0.23862 2.84929 2.43386 2.70756 33 - -
15772 1.38629 1.38629 1.38629 1.38629
15773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15774 34 2.57915 2.25909 2.64442 0.28946 34 - -
15775 1.38629 1.38629 1.38629 1.38629
15776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15777 35 2.81865 0.23582 2.88868 2.35662 35 - -
15778 1.38629 1.38629 1.38629 1.38629
15779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15780 36 2.53331 3.02441 0.20344 2.88069 36 - -
15781 1.38629 1.38629 1.38629 1.38629
15782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15783 37 0.23862 2.84929 2.43386 2.70756 37 - -
15784 1.38629 1.38629 1.38629 1.38629
15785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15786 38 2.57915 2.25909 2.64442 0.28946 38 - -
15787 1.38629 1.38629 1.38629 1.38629
15788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15789 39 2.53331 3.02441 0.20344 2.88069 39 - -
15790 1.38629 1.38629 1.38629 1.38629
15791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15792 40 0.23862 2.84929 2.43386 2.70756 40 - -
15793 1.38629 1.38629 1.38629 1.38629
15794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15795 41 0.23862 2.84929 2.43386 2.70756 41 - -
15796 1.38629 1.38629 1.38629 1.38629
15797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15798 42 2.53331 3.02441 0.20344 2.88069 42 - -
15799 1.38629 1.38629 1.38629 1.38629
15800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15801 43 0.23862 2.84929 2.43386 2.70756 43 - -
15802 1.38629 1.38629 1.38629 1.38629
15803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15804 44 0.23862 2.84929 2.43386 2.70756 44 - -
15805 1.38629 1.38629 1.38629 1.38629
15806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15807 45 2.81865 0.23582 2.88868 2.35662 45 - -
15808 1.38629 1.38629 1.38629 1.38629
15809 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
15810 //
15811 HMMER3/b [3.0 | March 2010]
15812 NAME 2_5.8_Tracheophyta_58S_start_elevenf_long
15813 LENG 45
15814 ALPH DNA
15815 RF no
15816 CS no
15817 MAP yes
15818 DATE Fri Feb 17 16:15:34 2012
15819 NSEQ 3158
15820 EFFN 3.653196
15821 CKSUM 2420636055
15822 STATS LOCAL MSV -7.8226 0.71933
15823 STATS LOCAL VITERBI -7.6855 0.71933
15824 STATS LOCAL FORWARD -3.9132 0.71933
15825 HMM A C G T
15826 m->m m->i m->d i->m i->i d->m d->d
15827 COMPO 1.39185 1.23333 1.38511 1.56175
15828 1.38629 1.38629 1.38629 1.38629
15829 0.03477 4.06960 4.06960 1.46634 0.26236 0.00000 *
15830 1 2.57583 0.45001 2.63698 1.53848 1 - -
15831 1.38629 1.38629 1.38629 1.38629
15832 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15833 2 2.88582 3.63349 0.11775 3.54577 2 - -
15834 1.38629 1.38629 1.38629 1.38629
15835 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15836 3 0.13788 3.44636 2.77956 3.35604 3 - -
15837 1.38629 1.38629 1.38629 1.38629
15838 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15839 4 3.54821 0.11728 3.59265 2.91207 4 - -
15840 1.38629 1.38629 1.38629 1.38629
15841 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15842 5 3.19098 2.66011 3.23517 0.16302 5 - -
15843 1.38629 1.38629 1.38629 1.38629
15844 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15845 6 3.42986 0.13697 3.40536 2.77390 6 - -
15846 1.38629 1.38629 1.38629 1.38629
15847 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15848 7 3.09775 2.42630 3.14563 0.19426 7 - -
15849 1.38629 1.38629 1.38629 1.38629
15850 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15851 8 3.44877 0.13309 3.42268 2.81007 8 - -
15852 1.38629 1.38629 1.38629 1.38629
15853 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15854 9 3.01623 3.68846 0.10671 3.60382 9 - -
15855 1.38629 1.38629 1.38629 1.38629
15856 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15857 10 2.48283 3.36876 0.17283 3.19955 10 - -
15858 1.38629 1.38629 1.38629 1.38629
15859 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15860 11 3.50423 0.12601 3.55014 2.81999 11 - -
15861 1.38629 1.38629 1.38629 1.38629
15862 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15863 12 0.12934 3.48051 2.86668 3.39184 12 - -
15864 1.38629 1.38629 1.38629 1.38629
15865 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15866 13 0.13749 3.44790 2.78335 3.35766 13 - -
15867 1.38629 1.38629 1.38629 1.38629
15868 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15869 14 3.49938 0.12700 3.54546 2.81022 14 - -
15870 1.38629 1.38629 1.38629 1.38629
15871 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15872 15 2.92829 3.65209 0.11396 3.56553 15 - -
15873 1.38629 1.38629 1.38629 1.38629
15874 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15875 16 2.92829 3.65209 0.11396 3.56553 16 - -
15876 1.38629 1.38629 1.38629 1.38629
15877 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15878 17 0.12934 3.48051 2.86668 3.39184 17 - -
15879 1.38629 1.38629 1.38629 1.38629
15880 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15881 18 3.19098 2.66011 3.23517 0.16302 18 - -
15882 1.38629 1.38629 1.38629 1.38629
15883 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15884 19 0.12934 3.48051 2.86668 3.39184 19 - -
15885 1.38629 1.38629 1.38629 1.38629
15886 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15887 20 3.00669 2.63039 3.15909 0.17909 20 - -
15888 1.38629 1.38629 1.38629 1.38629
15889 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15890 21 3.47468 0.13208 3.52163 2.76138 21 - -
15891 1.38629 1.38629 1.38629 1.38629
15892 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15893 22 3.14563 2.54221 3.19154 0.17774 22 - -
15894 1.38629 1.38629 1.38629 1.38629
15895 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15896 23 2.40428 0.27051 2.83402 2.43148 23 - -
15897 1.38629 1.38629 1.38629 1.38629
15898 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15899 24 3.01623 3.68846 0.10671 3.60382 24 - -
15900 1.38629 1.38629 1.38629 1.38629
15901 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15902 25 2.92872 3.60390 0.11987 3.43317 25 - -
15903 1.38629 1.38629 1.38629 1.38629
15904 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15905 26 3.50426 0.12601 3.55016 2.82005 26 - -
15906 1.38629 1.38629 1.38629 1.38629
15907 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15908 27 3.11209 2.57957 3.08463 0.18160 27 - -
15909 1.38629 1.38629 1.38629 1.38629
15910 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15911 28 3.35857 0.13687 3.41010 2.81184 28 - -
15912 1.38629 1.38629 1.38629 1.38629
15913 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15914 29 2.91314 2.56174 3.10427 0.19399 29 - -
15915 1.38629 1.38629 1.38629 1.38629
15916 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15917 30 3.25253 0.18463 3.30727 2.37201 30 - -
15918 1.38629 1.38629 1.38629 1.38629
15919 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15920 31 2.92597 3.51246 0.12332 3.42391 31 - -
15921 1.38629 1.38629 1.38629 1.38629
15922 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15923 32 3.54821 0.11728 3.59265 2.91207 32 - -
15924 1.38629 1.38629 1.38629 1.38629
15925 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15926 33 0.13749 3.44790 2.78335 3.35766 33 - -
15927 1.38629 1.38629 1.38629 1.38629
15928 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15929 34 3.00658 2.63037 3.15904 0.17910 34 - -
15930 1.38629 1.38629 1.38629 1.38629
15931 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15932 35 3.48190 0.13058 3.52860 2.77550 35 - -
15933 1.38629 1.38629 1.38629 1.38629
15934 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15935 36 2.92829 3.65209 0.11396 3.56553 36 - -
15936 1.38629 1.38629 1.38629 1.38629
15937 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15938 37 0.13762 3.44739 2.78209 3.35712 37 - -
15939 1.38629 1.38629 1.38629 1.38629
15940 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15941 38 3.16097 2.58108 3.20628 0.17267 38 - -
15942 1.38629 1.38629 1.38629 1.38629
15943 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15944 39 2.93744 3.44619 0.13024 3.29028 39 - -
15945 1.38629 1.38629 1.38629 1.38629
15946 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15947 40 0.12934 3.48051 2.86668 3.39184 40 - -
15948 1.38629 1.38629 1.38629 1.38629
15949 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15950 41 0.12934 3.48051 2.86668 3.39184 41 - -
15951 1.38629 1.38629 1.38629 1.38629
15952 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15953 42 2.89162 3.48850 0.12826 3.37134 42 - -
15954 1.38629 1.38629 1.38629 1.38629
15955 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15956 43 0.13762 3.44739 2.78209 3.35712 43 - -
15957 1.38629 1.38629 1.38629 1.38629
15958 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15959 44 0.13812 3.44543 2.77725 3.35505 44 - -
15960 1.38629 1.38629 1.38629 1.38629
15961 0.03477 4.06960 4.06960 1.46634 0.26236 1.09861 0.40547
15962 45 3.50165 0.12654 3.54765 2.81479 45 - -
15963 1.38629 1.38629 1.38629 1.38629
15964 0.01753 4.05237 * 1.46634 0.26236 0.00000 *
15965 //
15966 HMMER3/b [3.0 | March 2010]
15967 NAME 2_5.8_Tracheophyta_58S_start_fivea_long
15968 LENG 45
15969 ALPH DNA
15970 RF no
15971 CS no
15972 MAP yes
15973 DATE Fri Feb 17 15:56:00 2012
15974 NSEQ 2
15975 EFFN 2.000000
15976 CKSUM 501771485
15977 STATS LOCAL MSV -7.3842 0.72813
15978 STATS LOCAL VITERBI -8.0347 0.72813
15979 STATS LOCAL FORWARD -3.2361 0.72813
15980 HMM A C G T
15981 m->m m->i m->d i->m i->i d->m d->d
15982 COMPO 1.29099 1.34237 1.49789 1.42639
15983 1.38629 1.38629 1.38629 1.38629
15984 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
15985 1 2.57915 2.25909 2.64442 0.28946 1 - -
15986 1.38629 1.38629 1.38629 1.38629
15987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15988 2 2.53331 3.02441 0.20344 2.88069 2 - -
15989 1.38629 1.38629 1.38629 1.38629
15990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15991 3 0.23862 2.84929 2.43386 2.70756 3 - -
15992 1.38629 1.38629 1.38629 1.38629
15993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15994 4 2.81865 0.23582 2.88868 2.35662 4 - -
15995 1.38629 1.38629 1.38629 1.38629
15996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
15997 5 2.57915 2.25909 2.64442 0.28946 5 - -
15998 1.38629 1.38629 1.38629 1.38629
15999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16000 6 2.81865 0.23582 2.88868 2.35662 6 - -
16001 1.38629 1.38629 1.38629 1.38629
16002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16003 7 2.57915 2.25909 2.64442 0.28946 7 - -
16004 1.38629 1.38629 1.38629 1.38629
16005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16006 8 2.81865 0.23582 2.88868 2.35662 8 - -
16007 1.38629 1.38629 1.38629 1.38629
16008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16009 9 2.53331 3.02441 0.20344 2.88069 9 - -
16010 1.38629 1.38629 1.38629 1.38629
16011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16012 10 0.23862 2.84929 2.43386 2.70756 10 - -
16013 1.38629 1.38629 1.38629 1.38629
16014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16015 11 2.81865 0.23582 2.88868 2.35662 11 - -
16016 1.38629 1.38629 1.38629 1.38629
16017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16018 12 0.23862 2.84929 2.43386 2.70756 12 - -
16019 1.38629 1.38629 1.38629 1.38629
16020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16021 13 0.23862 2.84929 2.43386 2.70756 13 - -
16022 1.38629 1.38629 1.38629 1.38629
16023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16024 14 2.81865 0.23582 2.88868 2.35662 14 - -
16025 1.38629 1.38629 1.38629 1.38629
16026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16027 15 2.53331 3.02441 0.20344 2.88069 15 - -
16028 1.38629 1.38629 1.38629 1.38629
16029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16030 16 2.53331 3.02441 0.20344 2.88069 16 - -
16031 1.38629 1.38629 1.38629 1.38629
16032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16033 17 0.23862 2.84929 2.43386 2.70756 17 - -
16034 1.38629 1.38629 1.38629 1.38629
16035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16036 18 2.57915 2.25909 2.64442 0.28946 18 - -
16037 1.38629 1.38629 1.38629 1.38629
16038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16039 19 0.23862 2.84929 2.43386 2.70756 19 - -
16040 1.38629 1.38629 1.38629 1.38629
16041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16042 20 2.57915 2.25909 2.64442 0.28946 20 - -
16043 1.38629 1.38629 1.38629 1.38629
16044 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16045 21 2.81865 0.23582 2.88868 2.35662 21 - -
16046 1.38629 1.38629 1.38629 1.38629
16047 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16048 22 2.57915 2.25909 2.64442 0.28946 22 - -
16049 1.38629 1.38629 1.38629 1.38629
16050 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16051 23 2.57915 2.25909 2.64442 0.28946 23 - -
16052 1.38629 1.38629 1.38629 1.38629
16053 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16054 24 2.53331 3.02441 0.20344 2.88069 24 - -
16055 1.38629 1.38629 1.38629 1.38629
16056 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16057 25 2.53331 3.02441 0.20344 2.88069 25 - -
16058 1.38629 1.38629 1.38629 1.38629
16059 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16060 26 2.81865 0.23582 2.88868 2.35662 26 - -
16061 1.38629 1.38629 1.38629 1.38629
16062 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16063 27 2.57915 2.25909 2.64442 0.28946 27 - -
16064 1.38629 1.38629 1.38629 1.38629
16065 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16066 28 2.81865 0.23582 2.88868 2.35662 28 - -
16067 1.38629 1.38629 1.38629 1.38629
16068 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16069 29 2.57915 2.25909 2.64442 0.28946 29 - -
16070 1.38629 1.38629 1.38629 1.38629
16071 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16072 30 2.57915 2.25909 2.64442 0.28946 30 - -
16073 1.38629 1.38629 1.38629 1.38629
16074 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16075 31 0.23862 2.84929 2.43386 2.70756 31 - -
16076 1.38629 1.38629 1.38629 1.38629
16077 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16078 32 2.81865 0.23582 2.88868 2.35662 32 - -
16079 1.38629 1.38629 1.38629 1.38629
16080 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16081 33 2.81865 0.23582 2.88868 2.35662 33 - -
16082 1.38629 1.38629 1.38629 1.38629
16083 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16084 34 0.23862 2.84929 2.43386 2.70756 34 - -
16085 1.38629 1.38629 1.38629 1.38629
16086 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16087 35 2.81865 0.23582 2.88868 2.35662 35 - -
16088 1.38629 1.38629 1.38629 1.38629
16089 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16090 36 2.53331 3.02441 0.20344 2.88069 36 - -
16091 1.38629 1.38629 1.38629 1.38629
16092 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16093 37 0.23862 2.84929 2.43386 2.70756 37 - -
16094 1.38629 1.38629 1.38629 1.38629
16095 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16096 38 2.57915 2.25909 2.64442 0.28946 38 - -
16097 1.38629 1.38629 1.38629 1.38629
16098 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16099 39 2.53331 3.02441 0.20344 2.88069 39 - -
16100 1.38629 1.38629 1.38629 1.38629
16101 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16102 40 0.23862 2.84929 2.43386 2.70756 40 - -
16103 1.38629 1.38629 1.38629 1.38629
16104 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16105 41 0.23862 2.84929 2.43386 2.70756 41 - -
16106 1.38629 1.38629 1.38629 1.38629
16107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16108 42 2.53331 3.02441 0.20344 2.88069 42 - -
16109 1.38629 1.38629 1.38629 1.38629
16110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16111 43 0.23862 2.84929 2.43386 2.70756 43 - -
16112 1.38629 1.38629 1.38629 1.38629
16113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16114 44 0.23862 2.84929 2.43386 2.70756 44 - -
16115 1.38629 1.38629 1.38629 1.38629
16116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16117 45 2.81865 0.23582 2.88868 2.35662 45 - -
16118 1.38629 1.38629 1.38629 1.38629
16119 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16120 //
16121 HMMER3/b [3.0 | March 2010]
16122 NAME 2_5.8_Tracheophyta_58S_start_fiveb_long
16123 LENG 45
16124 ALPH DNA
16125 RF no
16126 CS no
16127 MAP yes
16128 DATE Fri Feb 17 15:56:11 2012
16129 NSEQ 2
16130 EFFN 2.000000
16131 CKSUM 3891266361
16132 STATS LOCAL MSV -7.4753 0.72874
16133 STATS LOCAL VITERBI -8.0224 0.72874
16134 STATS LOCAL FORWARD -3.8081 0.72874
16135 HMM A C G T
16136 m->m m->i m->d i->m i->i d->m d->d
16137 COMPO 1.23536 1.43285 1.49047 1.40497
16138 1.38629 1.38629 1.38629 1.38629
16139 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16140 1 2.81865 0.23582 2.88868 2.35662 1 - -
16141 1.38629 1.38629 1.38629 1.38629
16142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16143 2 2.53331 3.02441 0.20344 2.88069 2 - -
16144 1.38629 1.38629 1.38629 1.38629
16145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16146 3 0.23862 2.84929 2.43386 2.70756 3 - -
16147 1.38629 1.38629 1.38629 1.38629
16148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16149 4 2.81865 0.23582 2.88868 2.35662 4 - -
16150 1.38629 1.38629 1.38629 1.38629
16151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16152 5 2.57915 2.25909 2.64442 0.28946 5 - -
16153 1.38629 1.38629 1.38629 1.38629
16154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16155 6 2.81865 0.23582 2.88868 2.35662 6 - -
16156 1.38629 1.38629 1.38629 1.38629
16157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16158 7 2.57915 2.25909 2.64442 0.28946 7 - -
16159 1.38629 1.38629 1.38629 1.38629
16160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16161 8 0.23862 2.84929 2.43386 2.70756 8 - -
16162 1.38629 1.38629 1.38629 1.38629
16163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16164 9 2.53331 3.02441 0.20344 2.88069 9 - -
16165 1.38629 1.38629 1.38629 1.38629
16166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16167 10 0.23862 2.84929 2.43386 2.70756 10 - -
16168 1.38629 1.38629 1.38629 1.38629
16169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16170 11 2.81865 0.23582 2.88868 2.35662 11 - -
16171 1.38629 1.38629 1.38629 1.38629
16172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16173 12 0.23862 2.84929 2.43386 2.70756 12 - -
16174 1.38629 1.38629 1.38629 1.38629
16175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16176 13 0.23862 2.84929 2.43386 2.70756 13 - -
16177 1.38629 1.38629 1.38629 1.38629
16178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16179 14 2.81865 0.23582 2.88868 2.35662 14 - -
16180 1.38629 1.38629 1.38629 1.38629
16181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16182 15 0.23862 2.84929 2.43386 2.70756 15 - -
16183 1.38629 1.38629 1.38629 1.38629
16184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16185 16 2.53331 3.02441 0.20344 2.88069 16 - -
16186 1.38629 1.38629 1.38629 1.38629
16187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16188 17 0.23862 2.84929 2.43386 2.70756 17 - -
16189 1.38629 1.38629 1.38629 1.38629
16190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16191 18 2.57915 2.25909 2.64442 0.28946 18 - -
16192 1.38629 1.38629 1.38629 1.38629
16193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16194 19 0.23862 2.84929 2.43386 2.70756 19 - -
16195 1.38629 1.38629 1.38629 1.38629
16196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16197 20 2.57915 2.25909 2.64442 0.28946 20 - -
16198 1.38629 1.38629 1.38629 1.38629
16199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16200 21 2.81865 0.23582 2.88868 2.35662 21 - -
16201 1.38629 1.38629 1.38629 1.38629
16202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16203 22 2.57915 2.25909 2.64442 0.28946 22 - -
16204 1.38629 1.38629 1.38629 1.38629
16205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16206 23 2.57915 2.25909 2.64442 0.28946 23 - -
16207 1.38629 1.38629 1.38629 1.38629
16208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16209 24 2.53331 3.02441 0.20344 2.88069 24 - -
16210 1.38629 1.38629 1.38629 1.38629
16211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16212 25 2.53331 3.02441 0.20344 2.88069 25 - -
16213 1.38629 1.38629 1.38629 1.38629
16214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16215 26 2.81865 0.23582 2.88868 2.35662 26 - -
16216 1.38629 1.38629 1.38629 1.38629
16217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16218 27 2.57915 2.25909 2.64442 0.28946 27 - -
16219 1.38629 1.38629 1.38629 1.38629
16220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16221 28 2.81865 0.23582 2.88868 2.35662 28 - -
16222 1.38629 1.38629 1.38629 1.38629
16223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16224 29 2.57915 2.25909 2.64442 0.28946 29 - -
16225 1.38629 1.38629 1.38629 1.38629
16226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16227 30 2.57915 2.25909 2.64442 0.28946 30 - -
16228 1.38629 1.38629 1.38629 1.38629
16229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16230 31 2.53331 3.02441 0.20344 2.88069 31 - -
16231 1.38629 1.38629 1.38629 1.38629
16232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16233 32 2.81865 0.23582 2.88868 2.35662 32 - -
16234 1.38629 1.38629 1.38629 1.38629
16235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16236 33 0.23862 2.84929 2.43386 2.70756 33 - -
16237 1.38629 1.38629 1.38629 1.38629
16238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16239 34 2.57915 2.25909 2.64442 0.28946 34 - -
16240 1.38629 1.38629 1.38629 1.38629
16241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16242 35 2.81865 0.23582 2.88868 2.35662 35 - -
16243 1.38629 1.38629 1.38629 1.38629
16244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16245 36 2.53331 3.02441 0.20344 2.88069 36 - -
16246 1.38629 1.38629 1.38629 1.38629
16247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16248 37 0.23862 2.84929 2.43386 2.70756 37 - -
16249 1.38629 1.38629 1.38629 1.38629
16250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16251 38 2.57915 2.25909 2.64442 0.28946 38 - -
16252 1.38629 1.38629 1.38629 1.38629
16253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16254 39 2.53331 3.02441 0.20344 2.88069 39 - -
16255 1.38629 1.38629 1.38629 1.38629
16256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16257 40 0.23862 2.84929 2.43386 2.70756 40 - -
16258 1.38629 1.38629 1.38629 1.38629
16259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16260 41 0.23862 2.84929 2.43386 2.70756 41 - -
16261 1.38629 1.38629 1.38629 1.38629
16262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16263 42 2.53331 3.02441 0.20344 2.88069 42 - -
16264 1.38629 1.38629 1.38629 1.38629
16265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16266 43 0.23862 2.84929 2.43386 2.70756 43 - -
16267 1.38629 1.38629 1.38629 1.38629
16268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16269 44 0.23862 2.84929 2.43386 2.70756 44 - -
16270 1.38629 1.38629 1.38629 1.38629
16271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16272 45 2.15554 1.00938 2.23102 0.88601 45 - -
16273 1.38629 1.38629 1.38629 1.38629
16274 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16275 //
16276 HMMER3/b [3.0 | March 2010]
16277 NAME 2_5.8_Tracheophyta_58S_start_fivec_long
16278 LENG 45
16279 ALPH DNA
16280 RF no
16281 CS no
16282 MAP yes
16283 DATE Fri Feb 17 15:56:17 2012
16284 NSEQ 2
16285 EFFN 2.000000
16286 CKSUM 173117858
16287 STATS LOCAL MSV -7.4090 0.72884
16288 STATS LOCAL VITERBI -8.1631 0.72884
16289 STATS LOCAL FORWARD -3.4359 0.72884
16290 HMM A C G T
16291 m->m m->i m->d i->m i->i d->m d->d
16292 COMPO 1.33846 1.31931 1.47459 1.42064
16293 1.38629 1.38629 1.38629 1.38629
16294 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16295 1 2.81865 0.23582 2.88868 2.35662 1 - -
16296 1.38629 1.38629 1.38629 1.38629
16297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16298 2 2.53331 3.02441 0.20344 2.88069 2 - -
16299 1.38629 1.38629 1.38629 1.38629
16300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16301 3 0.23862 2.84929 2.43386 2.70756 3 - -
16302 1.38629 1.38629 1.38629 1.38629
16303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16304 4 2.81865 0.23582 2.88868 2.35662 4 - -
16305 1.38629 1.38629 1.38629 1.38629
16306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16307 5 2.57915 2.25909 2.64442 0.28946 5 - -
16308 1.38629 1.38629 1.38629 1.38629
16309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16310 6 2.81865 0.23582 2.88868 2.35662 6 - -
16311 1.38629 1.38629 1.38629 1.38629
16312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16313 7 2.57915 2.25909 2.64442 0.28946 7 - -
16314 1.38629 1.38629 1.38629 1.38629
16315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16316 8 2.81865 0.23582 2.88868 2.35662 8 - -
16317 1.38629 1.38629 1.38629 1.38629
16318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16319 9 2.53331 3.02441 0.20344 2.88069 9 - -
16320 1.38629 1.38629 1.38629 1.38629
16321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16322 10 0.23862 2.84929 2.43386 2.70756 10 - -
16323 1.38629 1.38629 1.38629 1.38629
16324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16325 11 2.81865 0.23582 2.88868 2.35662 11 - -
16326 1.38629 1.38629 1.38629 1.38629
16327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16328 12 0.23862 2.84929 2.43386 2.70756 12 - -
16329 1.38629 1.38629 1.38629 1.38629
16330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16331 13 0.23862 2.84929 2.43386 2.70756 13 - -
16332 1.38629 1.38629 1.38629 1.38629
16333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16334 14 2.81865 0.23582 2.88868 2.35662 14 - -
16335 1.38629 1.38629 1.38629 1.38629
16336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16337 15 2.53331 3.02441 0.20344 2.88069 15 - -
16338 1.38629 1.38629 1.38629 1.38629
16339 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16340 16 2.53331 3.02441 0.20344 2.88069 16 - -
16341 1.38629 1.38629 1.38629 1.38629
16342 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16343 17 0.23862 2.84929 2.43386 2.70756 17 - -
16344 1.38629 1.38629 1.38629 1.38629
16345 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16346 18 2.57915 2.25909 2.64442 0.28946 18 - -
16347 1.38629 1.38629 1.38629 1.38629
16348 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16349 19 0.23862 2.84929 2.43386 2.70756 19 - -
16350 1.38629 1.38629 1.38629 1.38629
16351 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16352 20 2.57915 2.25909 2.64442 0.28946 20 - -
16353 1.38629 1.38629 1.38629 1.38629
16354 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16355 21 2.81865 0.23582 2.88868 2.35662 21 - -
16356 1.38629 1.38629 1.38629 1.38629
16357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16358 22 2.57915 2.25909 2.64442 0.28946 22 - -
16359 1.38629 1.38629 1.38629 1.38629
16360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16361 23 2.57915 2.25909 2.64442 0.28946 23 - -
16362 1.38629 1.38629 1.38629 1.38629
16363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16364 24 1.88179 1.10717 1.04597 1.79675 24 - -
16365 1.38629 1.38629 1.38629 1.38629
16366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16367 25 2.53331 3.02441 0.20344 2.88069 25 - -
16368 1.38629 1.38629 1.38629 1.38629
16369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16370 26 2.81865 0.23582 2.88868 2.35662 26 - -
16371 1.38629 1.38629 1.38629 1.38629
16372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16373 27 2.57915 2.25909 2.64442 0.28946 27 - -
16374 1.38629 1.38629 1.38629 1.38629
16375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16376 28 2.81865 0.23582 2.88868 2.35662 28 - -
16377 1.38629 1.38629 1.38629 1.38629
16378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16379 29 2.57915 2.25909 2.64442 0.28946 29 - -
16380 1.38629 1.38629 1.38629 1.38629
16381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16382 30 2.57915 2.25909 2.64442 0.28946 30 - -
16383 1.38629 1.38629 1.38629 1.38629
16384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16385 31 2.53331 3.02441 0.20344 2.88069 31 - -
16386 1.38629 1.38629 1.38629 1.38629
16387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16388 32 2.81865 0.23582 2.88868 2.35662 32 - -
16389 1.38629 1.38629 1.38629 1.38629
16390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16391 33 0.23862 2.84929 2.43386 2.70756 33 - -
16392 1.38629 1.38629 1.38629 1.38629
16393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16394 34 2.57915 2.25909 2.64442 0.28946 34 - -
16395 1.38629 1.38629 1.38629 1.38629
16396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16397 35 2.81865 0.23582 2.88868 2.35662 35 - -
16398 1.38629 1.38629 1.38629 1.38629
16399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16400 36 2.53331 3.02441 0.20344 2.88069 36 - -
16401 1.38629 1.38629 1.38629 1.38629
16402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16403 37 0.23862 2.84929 2.43386 2.70756 37 - -
16404 1.38629 1.38629 1.38629 1.38629
16405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16406 38 2.57915 2.25909 2.64442 0.28946 38 - -
16407 1.38629 1.38629 1.38629 1.38629
16408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16409 39 2.53331 3.02441 0.20344 2.88069 39 - -
16410 1.38629 1.38629 1.38629 1.38629
16411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16412 40 0.23862 2.84929 2.43386 2.70756 40 - -
16413 1.38629 1.38629 1.38629 1.38629
16414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16415 41 0.23862 2.84929 2.43386 2.70756 41 - -
16416 1.38629 1.38629 1.38629 1.38629
16417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16418 42 2.53331 3.02441 0.20344 2.88069 42 - -
16419 1.38629 1.38629 1.38629 1.38629
16420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16421 43 0.23862 2.84929 2.43386 2.70756 43 - -
16422 1.38629 1.38629 1.38629 1.38629
16423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16424 44 0.23862 2.84929 2.43386 2.70756 44 - -
16425 1.38629 1.38629 1.38629 1.38629
16426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16427 45 2.81865 0.23582 2.88868 2.35662 45 - -
16428 1.38629 1.38629 1.38629 1.38629
16429 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16430 //
16431 HMMER3/b [3.0 | March 2010]
16432 NAME 2_5.8_Tracheophyta_58S_start_fived_long
16433 LENG 45
16434 ALPH DNA
16435 RF no
16436 CS no
16437 MAP yes
16438 DATE Fri Feb 17 15:56:22 2012
16439 NSEQ 5
16440 EFFN 3.315430
16441 CKSUM 2978653859
16442 STATS LOCAL MSV -8.0586 0.71933
16443 STATS LOCAL VITERBI -7.5706 0.71933
16444 STATS LOCAL FORWARD -4.2608 0.71933
16445 HMM A C G T
16446 m->m m->i m->d i->m i->i d->m d->d
16447 COMPO 1.33912 1.45202 1.52718 1.24939
16448 1.38629 1.38629 1.38629 1.38629
16449 0.03694 4.01013 4.01013 1.46634 0.26236 0.00000 *
16450 1 3.08626 2.59365 3.13451 0.17906 1 - -
16451 1.38629 1.38629 1.38629 1.38629
16452 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16453 2 2.94591 3.58540 0.11742 3.48982 2 - -
16454 1.38629 1.38629 1.38629 1.38629
16455 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16456 3 0.14220 3.37794 2.80041 3.27938 3 - -
16457 1.38629 1.38629 1.38629 1.38629
16458 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16459 4 3.43043 0.13053 3.48000 2.82705 4 - -
16460 1.38629 1.38629 1.38629 1.38629
16461 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16462 5 3.08626 2.59365 3.13451 0.17906 5 - -
16463 1.38629 1.38629 1.38629 1.38629
16464 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16465 6 3.43043 0.13053 3.48000 2.82705 6 - -
16466 1.38629 1.38629 1.38629 1.38629
16467 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16468 7 3.08626 2.59365 3.13451 0.17906 7 - -
16469 1.38629 1.38629 1.38629 1.38629
16470 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16471 8 3.43043 0.13053 3.48000 2.82705 8 - -
16472 1.38629 1.38629 1.38629 1.38629
16473 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16474 9 0.14220 3.37794 2.80041 3.27938 9 - -
16475 1.38629 1.38629 1.38629 1.38629
16476 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16477 10 2.94591 3.58540 0.11742 3.48982 10 - -
16478 1.38629 1.38629 1.38629 1.38629
16479 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16480 11 3.43043 0.13053 3.48000 2.82705 11 - -
16481 1.38629 1.38629 1.38629 1.38629
16482 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16483 12 0.14220 3.37794 2.80041 3.27938 12 - -
16484 1.38629 1.38629 1.38629 1.38629
16485 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16486 13 0.14220 3.37794 2.80041 3.27938 13 - -
16487 1.38629 1.38629 1.38629 1.38629
16488 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16489 14 3.08626 2.59365 3.13451 0.17906 14 - -
16490 1.38629 1.38629 1.38629 1.38629
16491 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16492 15 2.94591 3.58540 0.11742 3.48982 15 - -
16493 1.38629 1.38629 1.38629 1.38629
16494 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16495 16 2.94591 3.58540 0.11742 3.48982 16 - -
16496 1.38629 1.38629 1.38629 1.38629
16497 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16498 17 0.14220 3.37794 2.80041 3.27938 17 - -
16499 1.38629 1.38629 1.38629 1.38629
16500 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16501 18 3.08626 2.59365 3.13451 0.17906 18 - -
16502 1.38629 1.38629 1.38629 1.38629
16503 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16504 19 0.14220 3.37794 2.80041 3.27938 19 - -
16505 1.38629 1.38629 1.38629 1.38629
16506 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16507 20 3.08626 2.59365 3.13451 0.17906 20 - -
16508 1.38629 1.38629 1.38629 1.38629
16509 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16510 21 3.43043 0.13053 3.48000 2.82705 21 - -
16511 1.38629 1.38629 1.38629 1.38629
16512 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16513 22 3.08626 2.59365 3.13451 0.17906 22 - -
16514 1.38629 1.38629 1.38629 1.38629
16515 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16516 23 3.43043 0.13053 3.48000 2.82705 23 - -
16517 1.38629 1.38629 1.38629 1.38629
16518 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16519 24 3.08626 2.59365 3.13451 0.17906 24 - -
16520 1.38629 1.38629 1.38629 1.38629
16521 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16522 25 2.94591 3.58540 0.11742 3.48982 25 - -
16523 1.38629 1.38629 1.38629 1.38629
16524 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16525 26 3.43043 0.13053 3.48000 2.82705 26 - -
16526 1.38629 1.38629 1.38629 1.38629
16527 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16528 27 3.08626 2.59365 3.13451 0.17906 27 - -
16529 1.38629 1.38629 1.38629 1.38629
16530 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16531 28 3.43043 0.13053 3.48000 2.82705 28 - -
16532 1.38629 1.38629 1.38629 1.38629
16533 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16534 29 3.08626 2.59365 3.13451 0.17906 29 - -
16535 1.38629 1.38629 1.38629 1.38629
16536 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16537 30 3.08626 2.59365 3.13451 0.17906 30 - -
16538 1.38629 1.38629 1.38629 1.38629
16539 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16540 31 2.94591 3.58540 0.11742 3.48982 31 - -
16541 1.38629 1.38629 1.38629 1.38629
16542 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16543 32 3.43043 0.13053 3.48000 2.82705 32 - -
16544 1.38629 1.38629 1.38629 1.38629
16545 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16546 33 0.14220 3.37794 2.80041 3.27938 33 - -
16547 1.38629 1.38629 1.38629 1.38629
16548 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16549 34 3.08626 2.59365 3.13451 0.17906 34 - -
16550 1.38629 1.38629 1.38629 1.38629
16551 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16552 35 3.08626 2.59365 3.13451 0.17906 35 - -
16553 1.38629 1.38629 1.38629 1.38629
16554 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16555 36 2.94591 3.58540 0.11742 3.48982 36 - -
16556 1.38629 1.38629 1.38629 1.38629
16557 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16558 37 0.14220 3.37794 2.80041 3.27938 37 - -
16559 1.38629 1.38629 1.38629 1.38629
16560 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16561 38 3.08626 2.59365 3.13451 0.17906 38 - -
16562 1.38629 1.38629 1.38629 1.38629
16563 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16564 39 2.94591 3.58540 0.11742 3.48982 39 - -
16565 1.38629 1.38629 1.38629 1.38629
16566 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16567 40 0.14220 3.37794 2.80041 3.27938 40 - -
16568 1.38629 1.38629 1.38629 1.38629
16569 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16570 41 0.14220 3.37794 2.80041 3.27938 41 - -
16571 1.38629 1.38629 1.38629 1.38629
16572 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16573 42 2.94591 3.58540 0.11742 3.48982 42 - -
16574 1.38629 1.38629 1.38629 1.38629
16575 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16576 43 0.14220 3.37794 2.80041 3.27938 43 - -
16577 1.38629 1.38629 1.38629 1.38629
16578 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16579 44 0.14220 3.37794 2.80041 3.27938 44 - -
16580 1.38629 1.38629 1.38629 1.38629
16581 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547
16582 45 3.43043 0.13053 3.48000 2.82705 45 - -
16583 1.38629 1.38629 1.38629 1.38629
16584 0.01864 3.99184 * 1.46634 0.26236 0.00000 *
16585 //
16586 HMMER3/b [3.0 | March 2010]
16587 NAME 2_5.8_Tracheophyta_58S_start_fivee_long
16588 LENG 45
16589 ALPH DNA
16590 RF no
16591 CS no
16592 MAP yes
16593 DATE Fri Feb 17 15:56:29 2012
16594 NSEQ 2
16595 EFFN 2.000000
16596 CKSUM 1491573942
16597 STATS LOCAL MSV -7.4671 0.72818
16598 STATS LOCAL VITERBI -8.1834 0.72818
16599 STATS LOCAL FORWARD -3.2586 0.72818
16600 HMM A C G T
16601 m->m m->i m->d i->m i->i d->m d->d
16602 COMPO 1.19248 1.28747 1.64165 1.48324
16603 1.38629 1.38629 1.38629 1.38629
16604 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16605 1 2.81865 0.23582 2.88868 2.35662 1 - -
16606 1.38629 1.38629 1.38629 1.38629
16607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16608 2 0.23862 2.84929 2.43386 2.70756 2 - -
16609 1.38629 1.38629 1.38629 1.38629
16610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16611 3 0.23862 2.84929 2.43386 2.70756 3 - -
16612 1.38629 1.38629 1.38629 1.38629
16613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16614 4 2.81865 0.23582 2.88868 2.35662 4 - -
16615 1.38629 1.38629 1.38629 1.38629
16616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16617 5 2.57915 2.25909 2.64442 0.28946 5 - -
16618 1.38629 1.38629 1.38629 1.38629
16619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16620 6 2.81865 0.23582 2.88868 2.35662 6 - -
16621 1.38629 1.38629 1.38629 1.38629
16622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16623 7 2.57915 2.25909 2.64442 0.28946 7 - -
16624 1.38629 1.38629 1.38629 1.38629
16625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16626 8 2.81865 0.23582 2.88868 2.35662 8 - -
16627 1.38629 1.38629 1.38629 1.38629
16628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16629 9 2.53331 3.02441 0.20344 2.88069 9 - -
16630 1.38629 1.38629 1.38629 1.38629
16631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16632 10 0.23862 2.84929 2.43386 2.70756 10 - -
16633 1.38629 1.38629 1.38629 1.38629
16634 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16635 11 2.81865 0.23582 2.88868 2.35662 11 - -
16636 1.38629 1.38629 1.38629 1.38629
16637 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16638 12 0.23862 2.84929 2.43386 2.70756 12 - -
16639 1.38629 1.38629 1.38629 1.38629
16640 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16641 13 0.23862 2.84929 2.43386 2.70756 13 - -
16642 1.38629 1.38629 1.38629 1.38629
16643 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16644 14 2.57915 2.25909 2.64442 0.28946 14 - -
16645 1.38629 1.38629 1.38629 1.38629
16646 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16647 15 2.53331 3.02441 0.20344 2.88069 15 - -
16648 1.38629 1.38629 1.38629 1.38629
16649 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16650 16 2.53331 3.02441 0.20344 2.88069 16 - -
16651 1.38629 1.38629 1.38629 1.38629
16652 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16653 17 0.23862 2.84929 2.43386 2.70756 17 - -
16654 1.38629 1.38629 1.38629 1.38629
16655 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16656 18 2.57915 2.25909 2.64442 0.28946 18 - -
16657 1.38629 1.38629 1.38629 1.38629
16658 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16659 19 0.23862 2.84929 2.43386 2.70756 19 - -
16660 1.38629 1.38629 1.38629 1.38629
16661 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16662 20 2.57915 2.25909 2.64442 0.28946 20 - -
16663 1.38629 1.38629 1.38629 1.38629
16664 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16665 21 2.81865 0.23582 2.88868 2.35662 21 - -
16666 1.38629 1.38629 1.38629 1.38629
16667 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16668 22 2.57915 2.25909 2.64442 0.28946 22 - -
16669 1.38629 1.38629 1.38629 1.38629
16670 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16671 23 2.81865 0.23582 2.88868 2.35662 23 - -
16672 1.38629 1.38629 1.38629 1.38629
16673 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16674 24 0.23862 2.84929 2.43386 2.70756 24 - -
16675 1.38629 1.38629 1.38629 1.38629
16676 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16677 25 2.53331 3.02441 0.20344 2.88069 25 - -
16678 1.38629 1.38629 1.38629 1.38629
16679 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16680 26 2.81865 0.23582 2.88868 2.35662 26 - -
16681 1.38629 1.38629 1.38629 1.38629
16682 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16683 27 2.57915 2.25909 2.64442 0.28946 27 - -
16684 1.38629 1.38629 1.38629 1.38629
16685 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16686 28 2.81865 0.23582 2.88868 2.35662 28 - -
16687 1.38629 1.38629 1.38629 1.38629
16688 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16689 29 2.57915 2.25909 2.64442 0.28946 29 - -
16690 1.38629 1.38629 1.38629 1.38629
16691 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16692 30 2.81865 0.23582 2.88868 2.35662 30 - -
16693 1.38629 1.38629 1.38629 1.38629
16694 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16695 31 0.23862 2.84929 2.43386 2.70756 31 - -
16696 1.38629 1.38629 1.38629 1.38629
16697 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16698 32 2.81865 0.23582 2.88868 2.35662 32 - -
16699 1.38629 1.38629 1.38629 1.38629
16700 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16701 33 0.23862 2.84929 2.43386 2.70756 33 - -
16702 1.38629 1.38629 1.38629 1.38629
16703 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16704 34 2.57915 2.25909 2.64442 0.28946 34 - -
16705 1.38629 1.38629 1.38629 1.38629
16706 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16707 35 2.81865 0.23582 2.88868 2.35662 35 - -
16708 1.38629 1.38629 1.38629 1.38629
16709 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16710 36 2.53331 3.02441 0.20344 2.88069 36 - -
16711 1.38629 1.38629 1.38629 1.38629
16712 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16713 37 0.23862 2.84929 2.43386 2.70756 37 - -
16714 1.38629 1.38629 1.38629 1.38629
16715 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16716 38 2.57915 2.25909 2.64442 0.28946 38 - -
16717 1.38629 1.38629 1.38629 1.38629
16718 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16719 39 2.53331 3.02441 0.20344 2.88069 39 - -
16720 1.38629 1.38629 1.38629 1.38629
16721 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16722 40 0.23862 2.84929 2.43386 2.70756 40 - -
16723 1.38629 1.38629 1.38629 1.38629
16724 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16725 41 0.23862 2.84929 2.43386 2.70756 41 - -
16726 1.38629 1.38629 1.38629 1.38629
16727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16728 42 2.53331 3.02441 0.20344 2.88069 42 - -
16729 1.38629 1.38629 1.38629 1.38629
16730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16731 43 0.23862 2.84929 2.43386 2.70756 43 - -
16732 1.38629 1.38629 1.38629 1.38629
16733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16734 44 0.23862 2.84929 2.43386 2.70756 44 - -
16735 1.38629 1.38629 1.38629 1.38629
16736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16737 45 2.81865 0.23582 2.88868 2.35662 45 - -
16738 1.38629 1.38629 1.38629 1.38629
16739 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16740 //
16741 HMMER3/b [3.0 | March 2010]
16742 NAME 2_5.8_Tracheophyta_58S_start_fivef_long
16743 LENG 45
16744 ALPH DNA
16745 RF no
16746 CS no
16747 MAP yes
16748 DATE Fri Feb 17 15:56:33 2012
16749 NSEQ 2
16750 EFFN 2.000000
16751 CKSUM 984617909
16752 STATS LOCAL MSV -7.5814 0.72836
16753 STATS LOCAL VITERBI -8.2385 0.72836
16754 STATS LOCAL FORWARD -3.3826 0.72836
16755 HMM A C G T
16756 m->m m->i m->d i->m i->i d->m d->d
16757 COMPO 1.34307 1.39264 1.49794 1.32070
16758 1.38629 1.38629 1.38629 1.38629
16759 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16760 1 2.57915 2.25909 2.64442 0.28946 1 - -
16761 1.38629 1.38629 1.38629 1.38629
16762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16763 2 2.53331 3.02441 0.20344 2.88069 2 - -
16764 1.38629 1.38629 1.38629 1.38629
16765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16766 3 0.23862 2.84929 2.43386 2.70756 3 - -
16767 1.38629 1.38629 1.38629 1.38629
16768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16769 4 2.81865 0.23582 2.88868 2.35662 4 - -
16770 1.38629 1.38629 1.38629 1.38629
16771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16772 5 2.57915 2.25909 2.64442 0.28946 5 - -
16773 1.38629 1.38629 1.38629 1.38629
16774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16775 6 2.81865 0.23582 2.88868 2.35662 6 - -
16776 1.38629 1.38629 1.38629 1.38629
16777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16778 7 2.57915 2.25909 2.64442 0.28946 7 - -
16779 1.38629 1.38629 1.38629 1.38629
16780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16781 8 2.81865 0.23582 2.88868 2.35662 8 - -
16782 1.38629 1.38629 1.38629 1.38629
16783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16784 9 2.53331 3.02441 0.20344 2.88069 9 - -
16785 1.38629 1.38629 1.38629 1.38629
16786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16787 10 2.53331 3.02441 0.20344 2.88069 10 - -
16788 1.38629 1.38629 1.38629 1.38629
16789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16790 11 2.81865 0.23582 2.88868 2.35662 11 - -
16791 1.38629 1.38629 1.38629 1.38629
16792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16793 12 0.23862 2.84929 2.43386 2.70756 12 - -
16794 1.38629 1.38629 1.38629 1.38629
16795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16796 13 0.23862 2.84929 2.43386 2.70756 13 - -
16797 1.38629 1.38629 1.38629 1.38629
16798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16799 14 2.57915 2.25909 2.64442 0.28946 14 - -
16800 1.38629 1.38629 1.38629 1.38629
16801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16802 15 2.53331 3.02441 0.20344 2.88069 15 - -
16803 1.38629 1.38629 1.38629 1.38629
16804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16805 16 2.53331 3.02441 0.20344 2.88069 16 - -
16806 1.38629 1.38629 1.38629 1.38629
16807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16808 17 0.23862 2.84929 2.43386 2.70756 17 - -
16809 1.38629 1.38629 1.38629 1.38629
16810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16811 18 2.57915 2.25909 2.64442 0.28946 18 - -
16812 1.38629 1.38629 1.38629 1.38629
16813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16814 19 0.23862 2.84929 2.43386 2.70756 19 - -
16815 1.38629 1.38629 1.38629 1.38629
16816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16817 20 2.57915 2.25909 2.64442 0.28946 20 - -
16818 1.38629 1.38629 1.38629 1.38629
16819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16820 21 2.81865 0.23582 2.88868 2.35662 21 - -
16821 1.38629 1.38629 1.38629 1.38629
16822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16823 22 2.57915 2.25909 2.64442 0.28946 22 - -
16824 1.38629 1.38629 1.38629 1.38629
16825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16826 23 2.81865 0.23582 2.88868 2.35662 23 - -
16827 1.38629 1.38629 1.38629 1.38629
16828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16829 24 0.23862 2.84929 2.43386 2.70756 24 - -
16830 1.38629 1.38629 1.38629 1.38629
16831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16832 25 2.53331 3.02441 0.20344 2.88069 25 - -
16833 1.38629 1.38629 1.38629 1.38629
16834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16835 26 2.81865 0.23582 2.88868 2.35662 26 - -
16836 1.38629 1.38629 1.38629 1.38629
16837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16838 27 2.57915 2.25909 2.64442 0.28946 27 - -
16839 1.38629 1.38629 1.38629 1.38629
16840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16841 28 2.81865 0.23582 2.88868 2.35662 28 - -
16842 1.38629 1.38629 1.38629 1.38629
16843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16844 29 2.57915 2.25909 2.64442 0.28946 29 - -
16845 1.38629 1.38629 1.38629 1.38629
16846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16847 30 2.81865 0.23582 2.88868 2.35662 30 - -
16848 1.38629 1.38629 1.38629 1.38629
16849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16850 31 2.57915 2.25909 2.64442 0.28946 31 - -
16851 1.38629 1.38629 1.38629 1.38629
16852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16853 32 2.81865 0.23582 2.88868 2.35662 32 - -
16854 1.38629 1.38629 1.38629 1.38629
16855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16856 33 2.81865 0.23582 2.88868 2.35662 33 - -
16857 1.38629 1.38629 1.38629 1.38629
16858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16859 34 0.23862 2.84929 2.43386 2.70756 34 - -
16860 1.38629 1.38629 1.38629 1.38629
16861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16862 35 2.57915 2.25909 2.64442 0.28946 35 - -
16863 1.38629 1.38629 1.38629 1.38629
16864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16865 36 2.53331 3.02441 0.20344 2.88069 36 - -
16866 1.38629 1.38629 1.38629 1.38629
16867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16868 37 0.23862 2.84929 2.43386 2.70756 37 - -
16869 1.38629 1.38629 1.38629 1.38629
16870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16871 38 2.57915 2.25909 2.64442 0.28946 38 - -
16872 1.38629 1.38629 1.38629 1.38629
16873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16874 39 2.53331 3.02441 0.20344 2.88069 39 - -
16875 1.38629 1.38629 1.38629 1.38629
16876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16877 40 0.23862 2.84929 2.43386 2.70756 40 - -
16878 1.38629 1.38629 1.38629 1.38629
16879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16880 41 0.23862 2.84929 2.43386 2.70756 41 - -
16881 1.38629 1.38629 1.38629 1.38629
16882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16883 42 2.53331 3.02441 0.20344 2.88069 42 - -
16884 1.38629 1.38629 1.38629 1.38629
16885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16886 43 0.23862 2.84929 2.43386 2.70756 43 - -
16887 1.38629 1.38629 1.38629 1.38629
16888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16889 44 0.23862 2.84929 2.43386 2.70756 44 - -
16890 1.38629 1.38629 1.38629 1.38629
16891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16892 45 2.57915 2.25909 2.64442 0.28946 45 - -
16893 1.38629 1.38629 1.38629 1.38629
16894 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
16895 //
16896 HMMER3/b [3.0 | March 2010]
16897 NAME 2_5.8_Tracheophyta_58S_start_fiveg_long
16898 LENG 45
16899 ALPH DNA
16900 RF no
16901 CS no
16902 MAP yes
16903 DATE Fri Feb 17 15:56:41 2012
16904 NSEQ 2
16905 EFFN 2.000000
16906 CKSUM 3312256803
16907 STATS LOCAL MSV -7.4483 0.72806
16908 STATS LOCAL VITERBI -8.3980 0.72806
16909 STATS LOCAL FORWARD -3.4369 0.72806
16910 HMM A C G T
16911 m->m m->i m->d i->m i->i d->m d->d
16912 COMPO 1.45962 1.33786 1.37657 1.37506
16913 1.38629 1.38629 1.38629 1.38629
16914 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
16915 1 2.81865 0.23582 2.88868 2.35662 1 - -
16916 1.38629 1.38629 1.38629 1.38629
16917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16918 2 2.53331 3.02441 0.20344 2.88069 2 - -
16919 1.38629 1.38629 1.38629 1.38629
16920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16921 3 0.23862 2.84929 2.43386 2.70756 3 - -
16922 1.38629 1.38629 1.38629 1.38629
16923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16924 4 2.81865 0.23582 2.88868 2.35662 4 - -
16925 1.38629 1.38629 1.38629 1.38629
16926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16927 5 2.57915 2.25909 2.64442 0.28946 5 - -
16928 1.38629 1.38629 1.38629 1.38629
16929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16930 6 2.81865 0.23582 2.88868 2.35662 6 - -
16931 1.38629 1.38629 1.38629 1.38629
16932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16933 7 2.57915 2.25909 2.64442 0.28946 7 - -
16934 1.38629 1.38629 1.38629 1.38629
16935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16936 8 2.81865 0.23582 2.88868 2.35662 8 - -
16937 1.38629 1.38629 1.38629 1.38629
16938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16939 9 2.53331 3.02441 0.20344 2.88069 9 - -
16940 1.38629 1.38629 1.38629 1.38629
16941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16942 10 0.23862 2.84929 2.43386 2.70756 10 - -
16943 1.38629 1.38629 1.38629 1.38629
16944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16945 11 2.57915 2.25909 2.64442 0.28946 11 - -
16946 1.38629 1.38629 1.38629 1.38629
16947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16948 12 0.23862 2.84929 2.43386 2.70756 12 - -
16949 1.38629 1.38629 1.38629 1.38629
16950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16951 13 0.23862 2.84929 2.43386 2.70756 13 - -
16952 1.38629 1.38629 1.38629 1.38629
16953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16954 14 2.57915 2.25909 2.64442 0.28946 14 - -
16955 1.38629 1.38629 1.38629 1.38629
16956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16957 15 2.53331 3.02441 0.20344 2.88069 15 - -
16958 1.38629 1.38629 1.38629 1.38629
16959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16960 16 2.53331 3.02441 0.20344 2.88069 16 - -
16961 1.38629 1.38629 1.38629 1.38629
16962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16963 17 2.57915 2.25909 2.64442 0.28946 17 - -
16964 1.38629 1.38629 1.38629 1.38629
16965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16966 18 2.57915 2.25909 2.64442 0.28946 18 - -
16967 1.38629 1.38629 1.38629 1.38629
16968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16969 19 0.23862 2.84929 2.43386 2.70756 19 - -
16970 1.38629 1.38629 1.38629 1.38629
16971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16972 20 2.57915 2.25909 2.64442 0.28946 20 - -
16973 1.38629 1.38629 1.38629 1.38629
16974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16975 21 2.81865 0.23582 2.88868 2.35662 21 - -
16976 1.38629 1.38629 1.38629 1.38629
16977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16978 22 2.57915 2.25909 2.64442 0.28946 22 - -
16979 1.38629 1.38629 1.38629 1.38629
16980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16981 23 2.81865 0.23582 2.88868 2.35662 23 - -
16982 1.38629 1.38629 1.38629 1.38629
16983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16984 24 2.53331 3.02441 0.20344 2.88069 24 - -
16985 1.38629 1.38629 1.38629 1.38629
16986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16987 25 2.53331 3.02441 0.20344 2.88069 25 - -
16988 1.38629 1.38629 1.38629 1.38629
16989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16990 26 2.81865 0.23582 2.88868 2.35662 26 - -
16991 1.38629 1.38629 1.38629 1.38629
16992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16993 27 2.57915 2.25909 2.64442 0.28946 27 - -
16994 1.38629 1.38629 1.38629 1.38629
16995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16996 28 2.81865 0.23582 2.88868 2.35662 28 - -
16997 1.38629 1.38629 1.38629 1.38629
16998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
16999 29 2.57915 2.25909 2.64442 0.28946 29 - -
17000 1.38629 1.38629 1.38629 1.38629
17001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17002 30 2.81865 0.23582 2.88868 2.35662 30 - -
17003 1.38629 1.38629 1.38629 1.38629
17004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17005 31 2.53331 3.02441 0.20344 2.88069 31 - -
17006 1.38629 1.38629 1.38629 1.38629
17007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17008 32 2.81865 0.23582 2.88868 2.35662 32 - -
17009 1.38629 1.38629 1.38629 1.38629
17010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17011 33 0.23862 2.84929 2.43386 2.70756 33 - -
17012 1.38629 1.38629 1.38629 1.38629
17013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17014 34 2.57915 2.25909 2.64442 0.28946 34 - -
17015 1.38629 1.38629 1.38629 1.38629
17016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17017 35 2.81865 0.23582 2.88868 2.35662 35 - -
17018 1.38629 1.38629 1.38629 1.38629
17019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17020 36 2.53331 3.02441 0.20344 2.88069 36 - -
17021 1.38629 1.38629 1.38629 1.38629
17022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17023 37 0.23862 2.84929 2.43386 2.70756 37 - -
17024 1.38629 1.38629 1.38629 1.38629
17025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17026 38 2.57915 2.25909 2.64442 0.28946 38 - -
17027 1.38629 1.38629 1.38629 1.38629
17028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17029 39 2.53331 3.02441 0.20344 2.88069 39 - -
17030 1.38629 1.38629 1.38629 1.38629
17031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17032 40 0.23862 2.84929 2.43386 2.70756 40 - -
17033 1.38629 1.38629 1.38629 1.38629
17034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17035 41 0.23862 2.84929 2.43386 2.70756 41 - -
17036 1.38629 1.38629 1.38629 1.38629
17037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17038 42 2.53331 3.02441 0.20344 2.88069 42 - -
17039 1.38629 1.38629 1.38629 1.38629
17040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17041 43 0.23862 2.84929 2.43386 2.70756 43 - -
17042 1.38629 1.38629 1.38629 1.38629
17043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17044 44 2.53331 3.02441 0.20344 2.88069 44 - -
17045 1.38629 1.38629 1.38629 1.38629
17046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
17047 45 2.81865 0.23582 2.88868 2.35662 45 - -
17048 1.38629 1.38629 1.38629 1.38629
17049 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
17050 //
17051 HMMER3/b [3.0 | March 2010]
17052 NAME 2_5.8_Tracheophyta_58S_start_fiveh_long
17053 LENG 45
17054 ALPH DNA
17055 RF no
17056 CS no
17057 MAP yes
17058 DATE Fri Feb 17 15:56:46 2012
17059 NSEQ 3
17060 EFFN 3.000000
17061 CKSUM 4174493381
17062 STATS LOCAL MSV -8.1279 0.72052
17063 STATS LOCAL VITERBI -7.7403 0.72052
17064 STATS LOCAL FORWARD -4.4656 0.72052
17065 HMM A C G T
17066 m->m m->i m->d i->m i->i d->m d->d
17067 COMPO 1.40219 1.52691 1.37723 1.25717
17068 1.38629 1.38629 1.38629 1.38629
17069 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
17070 1 2.97980 2.52563 3.03204 0.19727 1 - -
17071 1.38629 1.38629 1.38629 1.38629
17072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17073 2 2.86982 3.47591 0.13017 3.36931 2 - -
17074 1.38629 1.38629 1.38629 1.38629
17075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17076 3 0.15719 3.27118 2.73043 3.16274 3 - -
17077 1.38629 1.38629 1.38629 1.38629
17078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17079 4 3.30705 0.14631 3.36166 2.73626 4 - -
17080 1.38629 1.38629 1.38629 1.38629
17081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17082 5 2.97980 2.52563 3.03204 0.19727 5 - -
17083 1.38629 1.38629 1.38629 1.38629
17084 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17085 6 3.30705 0.14631 3.36166 2.73626 6 - -
17086 1.38629 1.38629 1.38629 1.38629
17087 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17088 7 2.97980 2.52563 3.03204 0.19727 7 - -
17089 1.38629 1.38629 1.38629 1.38629
17090 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17091 8 2.97980 2.52563 3.03204 0.19727 8 - -
17092 1.38629 1.38629 1.38629 1.38629
17093 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17094 9 2.86982 3.47591 0.13017 3.36931 9 - -
17095 1.38629 1.38629 1.38629 1.38629
17096 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17097 10 0.15719 3.27118 2.73043 3.16274 10 - -
17098 1.38629 1.38629 1.38629 1.38629
17099 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17100 11 3.30705 0.14631 3.36166 2.73626 11 - -
17101 1.38629 1.38629 1.38629 1.38629
17102 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17103 12 0.15719 3.27118 2.73043 3.16274 12 - -
17104 1.38629 1.38629 1.38629 1.38629
17105 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17106 13 0.15719 3.27118 2.73043 3.16274 13 - -
17107 1.38629 1.38629 1.38629 1.38629
17108 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17109 14 2.97980 2.52563 3.03204 0.19727 14 - -
17110 1.38629 1.38629 1.38629 1.38629
17111 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17112 15 2.86982 3.47591 0.13017 3.36931 15 - -
17113 1.38629 1.38629 1.38629 1.38629
17114 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17115 16 2.86982 3.47591 0.13017 3.36931 16 - -
17116 1.38629 1.38629 1.38629 1.38629
17117 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17118 17 0.15719 3.27118 2.73043 3.16274 17 - -
17119 1.38629 1.38629 1.38629 1.38629
17120 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17121 18 2.97980 2.52563 3.03204 0.19727 18 - -
17122 1.38629 1.38629 1.38629 1.38629
17123 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17124 19 0.15719 3.27118 2.73043 3.16274 19 - -
17125 1.38629 1.38629 1.38629 1.38629
17126 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17127 20 2.97980 2.52563 3.03204 0.19727 20 - -
17128 1.38629 1.38629 1.38629 1.38629
17129 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17130 21 3.30705 0.14631 3.36166 2.73626 21 - -
17131 1.38629 1.38629 1.38629 1.38629
17132 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17133 22 2.97980 2.52563 3.03204 0.19727 22 - -
17134 1.38629 1.38629 1.38629 1.38629
17135 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17136 23 2.97980 2.52563 3.03204 0.19727 23 - -
17137 1.38629 1.38629 1.38629 1.38629
17138 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17139 24 2.86982 3.47591 0.13017 3.36931 24 - -
17140 1.38629 1.38629 1.38629 1.38629
17141 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17142 25 2.86982 3.47591 0.13017 3.36931 25 - -
17143 1.38629 1.38629 1.38629 1.38629
17144 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17145 26 3.30705 0.14631 3.36166 2.73626 26 - -
17146 1.38629 1.38629 1.38629 1.38629
17147 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17148 27 2.97980 2.52563 3.03204 0.19727 27 - -
17149 1.38629 1.38629 1.38629 1.38629
17150 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17151 28 3.30705 0.14631 3.36166 2.73626 28 - -
17152 1.38629 1.38629 1.38629 1.38629
17153 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17154 29 2.97980 2.52563 3.03204 0.19727 29 - -
17155 1.38629 1.38629 1.38629 1.38629
17156 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17157 30 2.97980 2.52563 3.03204 0.19727 30 - -
17158 1.38629 1.38629 1.38629 1.38629
17159 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17160 31 2.86982 3.47591 0.13017 3.36931 31 - -
17161 1.38629 1.38629 1.38629 1.38629
17162 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17163 32 3.30705 0.14631 3.36166 2.73626 32 - -
17164 1.38629 1.38629 1.38629 1.38629
17165 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17166 33 0.15719 3.27118 2.73043 3.16274 33 - -
17167 1.38629 1.38629 1.38629 1.38629
17168 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17169 34 2.97980 2.52563 3.03204 0.19727 34 - -
17170 1.38629 1.38629 1.38629 1.38629
17171 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17172 35 3.30705 0.14631 3.36166 2.73626 35 - -
17173 1.38629 1.38629 1.38629 1.38629
17174 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17175 36 2.86982 3.47591 0.13017 3.36931 36 - -
17176 1.38629 1.38629 1.38629 1.38629
17177 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17178 37 0.15719 3.27118 2.73043 3.16274 37 - -
17179 1.38629 1.38629 1.38629 1.38629
17180 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17181 38 2.97980 2.52563 3.03204 0.19727 38 - -
17182 1.38629 1.38629 1.38629 1.38629
17183 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17184 39 2.86982 3.47591 0.13017 3.36931 39 - -
17185 1.38629 1.38629 1.38629 1.38629
17186 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17187 40 0.15719 3.27118 2.73043 3.16274 40 - -
17188 1.38629 1.38629 1.38629 1.38629
17189 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17190 41 0.15719 3.27118 2.73043 3.16274 41 - -
17191 1.38629 1.38629 1.38629 1.38629
17192 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17193 42 2.86982 3.47591 0.13017 3.36931 42 - -
17194 1.38629 1.38629 1.38629 1.38629
17195 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17196 43 0.15719 3.27118 2.73043 3.16274 43 - -
17197 1.38629 1.38629 1.38629 1.38629
17198 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17199 44 2.86982 3.47591 0.13017 3.36931 44 - -
17200 1.38629 1.38629 1.38629 1.38629
17201 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
17202 45 3.30705 0.14631 3.36166 2.73626 45 - -
17203 1.38629 1.38629 1.38629 1.38629
17204 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
17205 //
17206 HMMER3/b [3.0 | March 2010]
17207 NAME 2_5.8_Tracheophyta_58S_start_fivei_long
17208 LENG 45
17209 ALPH DNA
17210 RF no
17211 CS no
17212 MAP yes
17213 DATE Fri Feb 17 15:56:52 2012
17214 NSEQ 210
17215 EFFN 4.367523
17216 CKSUM 2838594260
17217 STATS LOCAL MSV -7.0126 0.71932
17218 STATS LOCAL VITERBI -7.5941 0.71932
17219 STATS LOCAL FORWARD -4.2002 0.71932
17220 HMM A C G T
17221 m->m m->i m->d i->m i->i d->m d->d
17222 COMPO 1.40037 1.31676 1.37571 1.45743
17223 1.38629 1.38629 1.38629 1.38629
17224 0.03093 4.18472 4.18472 1.46634 0.26236 0.00000 *
17225 1 2.06832 0.85930 1.87569 1.21438 1 - -
17226 1.38629 1.38629 1.38629 1.38629
17227 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17228 2 2.21347 3.41443 0.19689 3.31032 2 - -
17229 1.38629 1.38629 1.38629 1.38629
17230 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17231 3 0.10951 3.66353 2.98433 3.59304 3 - -
17232 1.38629 1.38629 1.38629 1.38629
17233 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17234 4 3.75517 0.09755 3.79001 3.05864 4 - -
17235 1.38629 1.38629 1.38629 1.38629
17236 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17237 5 3.38437 2.78305 3.42094 0.13746 5 - -
17238 1.38629 1.38629 1.38629 1.38629
17239 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17240 6 3.75517 0.09755 3.79001 3.05864 6 - -
17241 1.38629 1.38629 1.38629 1.38629
17242 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17243 7 3.20676 2.31317 3.25195 0.19618 7 - -
17244 1.38629 1.38629 1.38629 1.38629
17245 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17246 8 3.66275 0.11496 3.70176 2.84291 8 - -
17247 1.38629 1.38629 1.38629 1.38629
17248 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17249 9 2.49528 3.58698 0.15135 3.49677 9 - -
17250 1.38629 1.38629 1.38629 1.38629
17251 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17252 10 0.89228 2.68555 0.81279 2.54492 10 - -
17253 1.38629 1.38629 1.38629 1.38629
17254 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17255 11 3.75517 0.09755 3.79001 3.05864 11 - -
17256 1.38629 1.38629 1.38629 1.38629
17257 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17258 12 0.10951 3.66353 2.98433 3.59304 12 - -
17259 1.38629 1.38629 1.38629 1.38629
17260 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17261 13 0.10951 3.66353 2.98433 3.59304 13 - -
17262 1.38629 1.38629 1.38629 1.38629
17263 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17264 14 2.82816 1.56588 2.88915 0.39104 14 - -
17265 1.38629 1.38629 1.38629 1.38629
17266 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17267 15 2.95597 3.80384 0.10338 3.73372 15 - -
17268 1.38629 1.38629 1.38629 1.38629
17269 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17270 16 2.85847 3.54253 0.12043 3.60575 16 - -
17271 1.38629 1.38629 1.38629 1.38629
17272 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17273 17 0.10951 3.66353 2.98433 3.59304 17 - -
17274 1.38629 1.38629 1.38629 1.38629
17275 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17276 18 3.38437 2.78305 3.42094 0.13746 18 - -
17277 1.38629 1.38629 1.38629 1.38629
17278 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17279 19 0.10951 3.66353 2.98433 3.59304 19 - -
17280 1.38629 1.38629 1.38629 1.38629
17281 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17282 20 3.38437 2.78305 3.42094 0.13746 20 - -
17283 1.38629 1.38629 1.38629 1.38629
17284 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17285 21 3.75517 0.09755 3.79001 3.05864 21 - -
17286 1.38629 1.38629 1.38629 1.38629
17287 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17288 22 3.38437 2.78305 3.42094 0.13746 22 - -
17289 1.38629 1.38629 1.38629 1.38629
17290 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17291 23 2.22540 0.66248 2.48298 1.22789 23 - -
17292 1.38629 1.38629 1.38629 1.38629
17293 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17294 24 3.13660 3.86684 0.09067 3.80190 24 - -
17295 1.38629 1.38629 1.38629 1.38629
17296 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17297 25 3.04672 3.52420 0.11688 3.40166 25 - -
17298 1.38629 1.38629 1.38629 1.38629
17299 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17300 26 3.75517 0.09755 3.79001 3.05864 26 - -
17301 1.38629 1.38629 1.38629 1.38629
17302 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17303 27 3.38437 2.78305 3.42094 0.13746 27 - -
17304 1.38629 1.38629 1.38629 1.38629
17305 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17306 28 3.75517 0.09755 3.79001 3.05864 28 - -
17307 1.38629 1.38629 1.38629 1.38629
17308 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17309 29 3.34206 2.65762 3.38062 0.15025 29 - -
17310 1.38629 1.38629 1.38629 1.38629
17311 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17312 30 2.92715 0.35120 2.99176 1.64813 30 - -
17313 1.38629 1.38629 1.38629 1.38629
17314 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17315 31 3.13660 3.86684 0.09067 3.80190 31 - -
17316 1.38629 1.38629 1.38629 1.38629
17317 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17318 32 3.75517 0.09755 3.79001 3.05864 32 - -
17319 1.38629 1.38629 1.38629 1.38629
17320 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17321 33 0.12502 3.60124 2.80014 3.52587 33 - -
17322 1.38629 1.38629 1.38629 1.38629
17323 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17324 34 3.38437 2.78305 3.42094 0.13746 34 - -
17325 1.38629 1.38629 1.38629 1.38629
17326 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17327 35 3.67538 0.11251 3.71382 2.87022 35 - -
17328 1.38629 1.38629 1.38629 1.38629
17329 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17330 36 3.13660 3.86684 0.09067 3.80190 36 - -
17331 1.38629 1.38629 1.38629 1.38629
17332 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17333 37 0.10951 3.66353 2.98433 3.59304 37 - -
17334 1.38629 1.38629 1.38629 1.38629
17335 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17336 38 3.38437 2.78305 3.42094 0.13746 38 - -
17337 1.38629 1.38629 1.38629 1.38629
17338 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17339 39 3.13660 3.86684 0.09067 3.80190 39 - -
17340 1.38629 1.38629 1.38629 1.38629
17341 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17342 40 0.10951 3.66353 2.98433 3.59304 40 - -
17343 1.38629 1.38629 1.38629 1.38629
17344 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17345 41 0.10951 3.66353 2.98433 3.59304 41 - -
17346 1.38629 1.38629 1.38629 1.38629
17347 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17348 42 3.13660 3.86684 0.09067 3.80190 42 - -
17349 1.38629 1.38629 1.38629 1.38629
17350 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17351 43 0.10951 3.66353 2.98433 3.59304 43 - -
17352 1.38629 1.38629 1.38629 1.38629
17353 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17354 44 1.34862 2.84454 0.48510 2.70893 44 - -
17355 1.38629 1.38629 1.38629 1.38629
17356 0.03093 4.18472 4.18472 1.46634 0.26236 1.09861 0.40547
17357 45 3.67026 0.11350 3.70893 2.85909 45 - -
17358 1.38629 1.38629 1.38629 1.38629
17359 0.01558 4.16938 * 1.46634 0.26236 0.00000 *
17360 //
17361 HMMER3/b [3.0 | March 2010]
17362 NAME 2_5.8_Tracheophyta_58S_start_fivej_long
17363 LENG 45
17364 ALPH DNA
17365 RF no
17366 CS no
17367 MAP yes
17368 DATE Fri Feb 17 15:56:56 2012
17369 NSEQ 33
17370 EFFN 3.258911
17371 CKSUM 3363897177
17372 STATS LOCAL MSV -7.9849 0.71934
17373 STATS LOCAL VITERBI -7.6114 0.71934
17374 STATS LOCAL FORWARD -4.3755 0.71934
17375 HMM A C G T
17376 m->m m->i m->d i->m i->i d->m d->d
17377 COMPO 1.47461 1.45701 1.31474 1.31061
17378 1.38629 1.38629 1.38629 1.38629
17379 0.03733 3.99983 3.99983 1.46634 0.26236 0.00000 *
17380 1 3.06783 2.58191 3.11677 0.18206 1 - -
17381 1.38629 1.38629 1.38629 1.38629
17382 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17383 2 2.93308 3.56677 0.11948 3.46928 2 - -
17384 1.38629 1.38629 1.38629 1.38629
17385 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17386 3 0.14465 3.35963 2.78850 3.25935 3 - -
17387 1.38629 1.38629 1.38629 1.38629
17388 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17389 4 3.40931 0.13308 3.45978 2.81164 4 - -
17390 1.38629 1.38629 1.38629 1.38629
17391 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17392 5 3.06783 2.58191 3.11677 0.18206 5 - -
17393 1.38629 1.38629 1.38629 1.38629
17394 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17395 6 3.40931 0.13308 3.45978 2.81164 6 - -
17396 1.38629 1.38629 1.38629 1.38629
17397 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17398 7 3.40931 0.13308 3.45978 2.81164 7 - -
17399 1.38629 1.38629 1.38629 1.38629
17400 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17401 8 3.06783 2.58191 3.11677 0.18206 8 - -
17402 1.38629 1.38629 1.38629 1.38629
17403 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17404 9 2.93308 3.56677 0.11948 3.46928 9 - -
17405 1.38629 1.38629 1.38629 1.38629
17406 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17407 10 2.93308 3.56677 0.11948 3.46928 10 - -
17408 1.38629 1.38629 1.38629 1.38629
17409 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17410 11 3.40931 0.13308 3.45978 2.81164 11 - -
17411 1.38629 1.38629 1.38629 1.38629
17412 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17413 12 0.14465 3.35963 2.78850 3.25935 12 - -
17414 1.38629 1.38629 1.38629 1.38629
17415 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17416 13 0.14465 3.35963 2.78850 3.25935 13 - -
17417 1.38629 1.38629 1.38629 1.38629
17418 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17419 14 3.06783 2.58191 3.11677 0.18206 14 - -
17420 1.38629 1.38629 1.38629 1.38629
17421 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17422 15 2.93308 3.56677 0.11948 3.46928 15 - -
17423 1.38629 1.38629 1.38629 1.38629
17424 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17425 16 2.93308 3.56677 0.11948 3.46928 16 - -
17426 1.38629 1.38629 1.38629 1.38629
17427 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17428 17 0.14465 3.35963 2.78850 3.25935 17 - -
17429 1.38629 1.38629 1.38629 1.38629
17430 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17431 18 3.06783 2.58191 3.11677 0.18206 18 - -
17432 1.38629 1.38629 1.38629 1.38629
17433 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17434 19 0.14465 3.35963 2.78850 3.25935 19 - -
17435 1.38629 1.38629 1.38629 1.38629
17436 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17437 20 3.06783 2.58191 3.11677 0.18206 20 - -
17438 1.38629 1.38629 1.38629 1.38629
17439 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17440 21 3.40931 0.13308 3.45978 2.81164 21 - -
17441 1.38629 1.38629 1.38629 1.38629
17442 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17443 22 3.06783 2.58191 3.11677 0.18206 22 - -
17444 1.38629 1.38629 1.38629 1.38629
17445 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17446 23 3.06783 2.58191 3.11677 0.18206 23 - -
17447 1.38629 1.38629 1.38629 1.38629
17448 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17449 24 2.93308 3.56677 0.11948 3.46928 24 - -
17450 1.38629 1.38629 1.38629 1.38629
17451 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17452 25 2.93308 3.56677 0.11948 3.46928 25 - -
17453 1.38629 1.38629 1.38629 1.38629
17454 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17455 26 3.40931 0.13308 3.45978 2.81164 26 - -
17456 1.38629 1.38629 1.38629 1.38629
17457 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17458 27 3.06783 2.58191 3.11677 0.18206 27 - -
17459 1.38629 1.38629 1.38629 1.38629
17460 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17461 28 3.40931 0.13308 3.45978 2.81164 28 - -
17462 1.38629 1.38629 1.38629 1.38629
17463 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17464 29 3.06783 2.58191 3.11677 0.18206 29 - -
17465 1.38629 1.38629 1.38629 1.38629
17466 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17467 30 3.40931 0.13308 3.45978 2.81164 30 - -
17468 1.38629 1.38629 1.38629 1.38629
17469 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17470 31 2.93308 3.56677 0.11948 3.46928 31 - -
17471 1.38629 1.38629 1.38629 1.38629
17472 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17473 32 3.06783 2.58191 3.11677 0.18206 32 - -
17474 1.38629 1.38629 1.38629 1.38629
17475 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17476 33 2.93308 3.56677 0.11948 3.46928 33 - -
17477 1.38629 1.38629 1.38629 1.38629
17478 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17479 34 3.06783 2.58191 3.11677 0.18206 34 - -
17480 1.38629 1.38629 1.38629 1.38629
17481 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17482 35 3.40931 0.13308 3.45978 2.81164 35 - -
17483 1.38629 1.38629 1.38629 1.38629
17484 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17485 36 2.93308 3.56677 0.11948 3.46928 36 - -
17486 1.38629 1.38629 1.38629 1.38629
17487 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17488 37 0.14465 3.35963 2.78850 3.25935 37 - -
17489 1.38629 1.38629 1.38629 1.38629
17490 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17491 38 3.06783 2.58191 3.11677 0.18206 38 - -
17492 1.38629 1.38629 1.38629 1.38629
17493 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17494 39 2.93308 3.56677 0.11948 3.46928 39 - -
17495 1.38629 1.38629 1.38629 1.38629
17496 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17497 40 0.14465 3.35963 2.78850 3.25935 40 - -
17498 1.38629 1.38629 1.38629 1.38629
17499 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17500 41 0.14465 3.35963 2.78850 3.25935 41 - -
17501 1.38629 1.38629 1.38629 1.38629
17502 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17503 42 2.93308 3.56677 0.11948 3.46928 42 - -
17504 1.38629 1.38629 1.38629 1.38629
17505 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17506 43 0.14465 3.35963 2.78850 3.25935 43 - -
17507 1.38629 1.38629 1.38629 1.38629
17508 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17509 44 0.14465 3.35963 2.78850 3.25935 44 - -
17510 1.38629 1.38629 1.38629 1.38629
17511 0.03733 3.99983 3.99983 1.46634 0.26236 1.09861 0.40547
17512 45 3.40931 0.13308 3.45978 2.81164 45 - -
17513 1.38629 1.38629 1.38629 1.38629
17514 0.01884 3.98135 * 1.46634 0.26236 0.00000 *
17515 //
17516 HMMER3/b [3.0 | March 2010]
17517 NAME 2_5.8_Tracheophyta_58S_start_fivek_long
17518 LENG 45
17519 ALPH DNA
17520 RF no
17521 CS no
17522 MAP yes
17523 DATE Fri Feb 17 15:57:01 2012
17524 NSEQ 50
17525 EFFN 3.543091
17526 CKSUM 2127064808
17527 STATS LOCAL MSV -7.5080 0.71932
17528 STATS LOCAL VITERBI -7.6308 0.71932
17529 STATS LOCAL FORWARD -3.8861 0.71932
17530 HMM A C G T
17531 m->m m->i m->d i->m i->i d->m d->d
17532 COMPO 1.39994 1.20823 1.38023 1.59384
17533 1.38629 1.38629 1.38629 1.38629
17534 0.03545 4.05058 4.05058 1.46634 0.26236 0.00000 *
17535 1 2.86575 0.31993 2.93116 1.81078 1 - -
17536 1.38629 1.38629 1.38629 1.38629
17537 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17538 2 2.99441 3.65633 0.10993 3.56823 2 - -
17539 1.38629 1.38629 1.38629 1.38629
17540 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17541 3 0.13323 3.44830 2.84594 3.35649 3 - -
17542 1.38629 1.38629 1.38629 1.38629
17543 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17544 4 3.51133 0.12125 3.55740 2.88560 4 - -
17545 1.38629 1.38629 1.38629 1.38629
17546 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17547 5 3.15782 2.63909 3.20331 0.16791 5 - -
17548 1.38629 1.38629 1.38629 1.38629
17549 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17550 6 3.51133 0.12125 3.55740 2.88560 6 - -
17551 1.38629 1.38629 1.38629 1.38629
17552 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17553 7 3.15782 2.63909 3.20331 0.16791 7 - -
17554 1.38629 1.38629 1.38629 1.38629
17555 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17556 8 3.51133 0.12125 3.55740 2.88560 8 - -
17557 1.38629 1.38629 1.38629 1.38629
17558 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17559 9 2.99441 3.65633 0.10993 3.56823 9 - -
17560 1.38629 1.38629 1.38629 1.38629
17561 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17562 10 2.99441 3.65633 0.10993 3.56823 10 - -
17563 1.38629 1.38629 1.38629 1.38629
17564 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17565 11 3.51133 0.12125 3.55740 2.88560 11 - -
17566 1.38629 1.38629 1.38629 1.38629
17567 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17568 12 0.13323 3.44830 2.84594 3.35649 12 - -
17569 1.38629 1.38629 1.38629 1.38629
17570 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17571 13 0.13323 3.44830 2.84594 3.35649 13 - -
17572 1.38629 1.38629 1.38629 1.38629
17573 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17574 14 3.51133 0.12125 3.55740 2.88560 14 - -
17575 1.38629 1.38629 1.38629 1.38629
17576 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17577 15 2.99441 3.65633 0.10993 3.56823 15 - -
17578 1.38629 1.38629 1.38629 1.38629
17579 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17580 16 2.99441 3.65633 0.10993 3.56823 16 - -
17581 1.38629 1.38629 1.38629 1.38629
17582 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17583 17 0.13323 3.44830 2.84594 3.35649 17 - -
17584 1.38629 1.38629 1.38629 1.38629
17585 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17586 18 3.15782 2.63909 3.20331 0.16791 18 - -
17587 1.38629 1.38629 1.38629 1.38629
17588 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17589 19 0.13323 3.44830 2.84594 3.35649 19 - -
17590 1.38629 1.38629 1.38629 1.38629
17591 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17592 20 3.15782 2.63909 3.20331 0.16791 20 - -
17593 1.38629 1.38629 1.38629 1.38629
17594 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17595 21 3.51133 0.12125 3.55740 2.88560 21 - -
17596 1.38629 1.38629 1.38629 1.38629
17597 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17598 22 3.15782 2.63909 3.20331 0.16791 22 - -
17599 1.38629 1.38629 1.38629 1.38629
17600 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17601 23 3.51133 0.12125 3.55740 2.88560 23 - -
17602 1.38629 1.38629 1.38629 1.38629
17603 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17604 24 2.99441 3.65633 0.10993 3.56823 24 - -
17605 1.38629 1.38629 1.38629 1.38629
17606 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17607 25 2.99441 3.65633 0.10993 3.56823 25 - -
17608 1.38629 1.38629 1.38629 1.38629
17609 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17610 26 3.51133 0.12125 3.55740 2.88560 26 - -
17611 1.38629 1.38629 1.38629 1.38629
17612 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17613 27 2.76636 1.79629 2.82691 0.33968 27 - -
17614 1.38629 1.38629 1.38629 1.38629
17615 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17616 28 3.51133 0.12125 3.55740 2.88560 28 - -
17617 1.38629 1.38629 1.38629 1.38629
17618 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17619 29 3.15782 2.63909 3.20331 0.16791 29 - -
17620 1.38629 1.38629 1.38629 1.38629
17621 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17622 30 3.35467 0.15484 3.40598 2.58554 30 - -
17623 1.38629 1.38629 1.38629 1.38629
17624 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17625 31 2.46606 3.38987 0.16971 3.28447 31 - -
17626 1.38629 1.38629 1.38629 1.38629
17627 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17628 32 3.23974 0.18362 3.29488 2.39143 32 - -
17629 1.38629 1.38629 1.38629 1.38629
17630 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17631 33 3.23974 0.18362 3.29488 2.39143 33 - -
17632 1.38629 1.38629 1.38629 1.38629
17633 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17634 34 0.16997 3.24763 2.75938 2.91677 34 - -
17635 1.38629 1.38629 1.38629 1.38629
17636 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17637 35 3.24462 0.16325 3.04612 2.74743 35 - -
17638 1.38629 1.38629 1.38629 1.38629
17639 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17640 36 2.99441 3.65633 0.10993 3.56823 36 - -
17641 1.38629 1.38629 1.38629 1.38629
17642 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17643 37 0.13323 3.44830 2.84594 3.35649 37 - -
17644 1.38629 1.38629 1.38629 1.38629
17645 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17646 38 3.15782 2.63909 3.20331 0.16791 38 - -
17647 1.38629 1.38629 1.38629 1.38629
17648 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17649 39 2.99441 3.65633 0.10993 3.56823 39 - -
17650 1.38629 1.38629 1.38629 1.38629
17651 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17652 40 0.13323 3.44830 2.84594 3.35649 40 - -
17653 1.38629 1.38629 1.38629 1.38629
17654 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17655 41 0.13323 3.44830 2.84594 3.35649 41 - -
17656 1.38629 1.38629 1.38629 1.38629
17657 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17658 42 2.99441 3.65633 0.10993 3.56823 42 - -
17659 1.38629 1.38629 1.38629 1.38629
17660 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17661 43 0.13323 3.44830 2.84594 3.35649 43 - -
17662 1.38629 1.38629 1.38629 1.38629
17663 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17664 44 0.13323 3.44830 2.84594 3.35649 44 - -
17665 1.38629 1.38629 1.38629 1.38629
17666 0.03545 4.05058 4.05058 1.46634 0.26236 1.09861 0.40547
17667 45 2.62759 1.52536 2.69282 0.44236 45 - -
17668 1.38629 1.38629 1.38629 1.38629
17669 0.01788 4.03302 * 1.46634 0.26236 0.00000 *
17670 //
17671 HMMER3/b [3.0 | March 2010]
17672 NAME 2_5.8_Tracheophyta_58S_start_ninea_long
17673 LENG 45
17674 ALPH DNA
17675 RF no
17676 CS no
17677 MAP yes
17678 DATE Fri Feb 17 16:12:28 2012
17679 NSEQ 18
17680 EFFN 3.229980
17681 CKSUM 3069628549
17682 STATS LOCAL MSV -8.0656 0.71932
17683 STATS LOCAL VITERBI -7.7526 0.71932
17684 STATS LOCAL FORWARD -4.0010 0.71932
17685 HMM A C G T
17686 m->m m->i m->d i->m i->i d->m d->d
17687 COMPO 1.40657 1.32294 1.38185 1.43736
17688 1.38629 1.38629 1.38629 1.38629
17689 0.03753 3.99452 3.99452 1.46634 0.26236 0.00000 *
17690 1 3.39834 0.13443 3.44926 2.80362 1 - -
17691 1.38629 1.38629 1.38629 1.38629
17692 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17693 2 2.92638 3.55708 0.12057 3.45859 2 - -
17694 1.38629 1.38629 1.38629 1.38629
17695 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17696 3 0.14594 3.35012 2.78230 3.24895 3 - -
17697 1.38629 1.38629 1.38629 1.38629
17698 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17699 4 3.39834 0.13443 3.44926 2.80362 4 - -
17700 1.38629 1.38629 1.38629 1.38629
17701 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17702 5 3.05828 2.57583 3.10759 0.18364 5 - -
17703 1.38629 1.38629 1.38629 1.38629
17704 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17705 6 3.39834 0.13443 3.44926 2.80362 6 - -
17706 1.38629 1.38629 1.38629 1.38629
17707 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17708 7 3.05828 2.57583 3.10759 0.18364 7 - -
17709 1.38629 1.38629 1.38629 1.38629
17710 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17711 8 3.05828 2.57583 3.10759 0.18364 8 - -
17712 1.38629 1.38629 1.38629 1.38629
17713 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17714 9 2.92638 3.55708 0.12057 3.45859 9 - -
17715 1.38629 1.38629 1.38629 1.38629
17716 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17717 10 2.92638 3.55708 0.12057 3.45859 10 - -
17718 1.38629 1.38629 1.38629 1.38629
17719 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17720 11 3.39834 0.13443 3.44926 2.80362 11 - -
17721 1.38629 1.38629 1.38629 1.38629
17722 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17723 12 0.14594 3.35012 2.78230 3.24895 12 - -
17724 1.38629 1.38629 1.38629 1.38629
17725 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17726 13 0.14594 3.35012 2.78230 3.24895 13 - -
17727 1.38629 1.38629 1.38629 1.38629
17728 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17729 14 3.39834 0.13443 3.44926 2.80362 14 - -
17730 1.38629 1.38629 1.38629 1.38629
17731 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17732 15 2.92638 3.55708 0.12057 3.45859 15 - -
17733 1.38629 1.38629 1.38629 1.38629
17734 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17735 16 2.92638 3.55708 0.12057 3.45859 16 - -
17736 1.38629 1.38629 1.38629 1.38629
17737 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17738 17 0.14594 3.35012 2.78230 3.24895 17 - -
17739 1.38629 1.38629 1.38629 1.38629
17740 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17741 18 3.05828 2.57583 3.10759 0.18364 18 - -
17742 1.38629 1.38629 1.38629 1.38629
17743 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17744 19 0.14594 3.35012 2.78230 3.24895 19 - -
17745 1.38629 1.38629 1.38629 1.38629
17746 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17747 20 3.05828 2.57583 3.10759 0.18364 20 - -
17748 1.38629 1.38629 1.38629 1.38629
17749 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17750 21 3.39834 0.13443 3.44926 2.80362 21 - -
17751 1.38629 1.38629 1.38629 1.38629
17752 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17753 22 3.05828 2.57583 3.10759 0.18364 22 - -
17754 1.38629 1.38629 1.38629 1.38629
17755 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17756 23 3.05828 2.57583 3.10759 0.18364 23 - -
17757 1.38629 1.38629 1.38629 1.38629
17758 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17759 24 2.92638 3.55708 0.12057 3.45859 24 - -
17760 1.38629 1.38629 1.38629 1.38629
17761 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17762 25 2.92638 3.55708 0.12057 3.45859 25 - -
17763 1.38629 1.38629 1.38629 1.38629
17764 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17765 26 3.39834 0.13443 3.44926 2.80362 26 - -
17766 1.38629 1.38629 1.38629 1.38629
17767 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17768 27 3.05828 2.57583 3.10759 0.18364 27 - -
17769 1.38629 1.38629 1.38629 1.38629
17770 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17771 28 3.39834 0.13443 3.44926 2.80362 28 - -
17772 1.38629 1.38629 1.38629 1.38629
17773 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17774 29 3.05828 2.57583 3.10759 0.18364 29 - -
17775 1.38629 1.38629 1.38629 1.38629
17776 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17777 30 3.39834 0.13443 3.44926 2.80362 30 - -
17778 1.38629 1.38629 1.38629 1.38629
17779 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17780 31 2.92638 3.55708 0.12057 3.45859 31 - -
17781 1.38629 1.38629 1.38629 1.38629
17782 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17783 32 3.39834 0.13443 3.44926 2.80362 32 - -
17784 1.38629 1.38629 1.38629 1.38629
17785 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17786 33 0.14594 3.35012 2.78230 3.24895 33 - -
17787 1.38629 1.38629 1.38629 1.38629
17788 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17789 34 3.05828 2.57583 3.10759 0.18364 34 - -
17790 1.38629 1.38629 1.38629 1.38629
17791 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17792 35 3.39834 0.13443 3.44926 2.80362 35 - -
17793 1.38629 1.38629 1.38629 1.38629
17794 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17795 36 2.92638 3.55708 0.12057 3.45859 36 - -
17796 1.38629 1.38629 1.38629 1.38629
17797 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17798 37 0.14594 3.35012 2.78230 3.24895 37 - -
17799 1.38629 1.38629 1.38629 1.38629
17800 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17801 38 3.05828 2.57583 3.10759 0.18364 38 - -
17802 1.38629 1.38629 1.38629 1.38629
17803 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17804 39 2.92638 3.55708 0.12057 3.45859 39 - -
17805 1.38629 1.38629 1.38629 1.38629
17806 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17807 40 0.14594 3.35012 2.78230 3.24895 40 - -
17808 1.38629 1.38629 1.38629 1.38629
17809 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17810 41 0.14594 3.35012 2.78230 3.24895 41 - -
17811 1.38629 1.38629 1.38629 1.38629
17812 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17813 42 2.92638 3.55708 0.12057 3.45859 42 - -
17814 1.38629 1.38629 1.38629 1.38629
17815 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17816 43 0.14594 3.35012 2.78230 3.24895 43 - -
17817 1.38629 1.38629 1.38629 1.38629
17818 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17819 44 0.14594 3.35012 2.78230 3.24895 44 - -
17820 1.38629 1.38629 1.38629 1.38629
17821 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547
17822 45 3.39834 0.13443 3.44926 2.80362 45 - -
17823 1.38629 1.38629 1.38629 1.38629
17824 0.01894 3.97593 * 1.46634 0.26236 0.00000 *
17825 //
17826 HMMER3/b [3.0 | March 2010]
17827 NAME 2_5.8_Tracheophyta_58S_start_nineb_long
17828 LENG 45
17829 ALPH DNA
17830 RF no
17831 CS no
17832 MAP yes
17833 DATE Fri Feb 17 16:12:35 2012
17834 NSEQ 5
17835 EFFN 3.227539
17836 CKSUM 4226317241
17837 STATS LOCAL MSV -7.9655 0.71933
17838 STATS LOCAL VITERBI -7.5560 0.71933
17839 STATS LOCAL FORWARD -4.1456 0.71933
17840 HMM A C G T
17841 m->m m->i m->d i->m i->i d->m d->d
17842 COMPO 1.40657 1.32285 1.38184 1.43748
17843 1.38629 1.38629 1.38629 1.38629
17844 0.03755 3.99407 3.99407 1.46634 0.26236 0.00000 *
17845 1 3.39741 0.13455 3.44837 2.80294 1 - -
17846 1.38629 1.38629 1.38629 1.38629
17847 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17848 2 2.92582 3.55626 0.12066 3.45768 2 - -
17849 1.38629 1.38629 1.38629 1.38629
17850 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17851 3 0.14605 3.34931 2.78177 3.24806 3 - -
17852 1.38629 1.38629 1.38629 1.38629
17853 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17854 4 3.39741 0.13455 3.44837 2.80294 4 - -
17855 1.38629 1.38629 1.38629 1.38629
17856 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17857 5 3.05748 2.57532 3.10682 0.18378 5 - -
17858 1.38629 1.38629 1.38629 1.38629
17859 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17860 6 3.39741 0.13455 3.44837 2.80294 6 - -
17861 1.38629 1.38629 1.38629 1.38629
17862 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17863 7 3.05748 2.57532 3.10682 0.18378 7 - -
17864 1.38629 1.38629 1.38629 1.38629
17865 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17866 8 3.39741 0.13455 3.44837 2.80294 8 - -
17867 1.38629 1.38629 1.38629 1.38629
17868 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17869 9 2.92582 3.55626 0.12066 3.45768 9 - -
17870 1.38629 1.38629 1.38629 1.38629
17871 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17872 10 2.92582 3.55626 0.12066 3.45768 10 - -
17873 1.38629 1.38629 1.38629 1.38629
17874 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17875 11 3.39741 0.13455 3.44837 2.80294 11 - -
17876 1.38629 1.38629 1.38629 1.38629
17877 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17878 12 0.14605 3.34931 2.78177 3.24806 12 - -
17879 1.38629 1.38629 1.38629 1.38629
17880 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17881 13 0.14605 3.34931 2.78177 3.24806 13 - -
17882 1.38629 1.38629 1.38629 1.38629
17883 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17884 14 3.39741 0.13455 3.44837 2.80294 14 - -
17885 1.38629 1.38629 1.38629 1.38629
17886 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17887 15 2.92582 3.55626 0.12066 3.45768 15 - -
17888 1.38629 1.38629 1.38629 1.38629
17889 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17890 16 2.92582 3.55626 0.12066 3.45768 16 - -
17891 1.38629 1.38629 1.38629 1.38629
17892 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17893 17 0.14605 3.34931 2.78177 3.24806 17 - -
17894 1.38629 1.38629 1.38629 1.38629
17895 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17896 18 3.05748 2.57532 3.10682 0.18378 18 - -
17897 1.38629 1.38629 1.38629 1.38629
17898 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17899 19 0.14605 3.34931 2.78177 3.24806 19 - -
17900 1.38629 1.38629 1.38629 1.38629
17901 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17902 20 3.05748 2.57532 3.10682 0.18378 20 - -
17903 1.38629 1.38629 1.38629 1.38629
17904 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17905 21 3.39741 0.13455 3.44837 2.80294 21 - -
17906 1.38629 1.38629 1.38629 1.38629
17907 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17908 22 3.05748 2.57532 3.10682 0.18378 22 - -
17909 1.38629 1.38629 1.38629 1.38629
17910 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17911 23 3.05748 2.57532 3.10682 0.18378 23 - -
17912 1.38629 1.38629 1.38629 1.38629
17913 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17914 24 2.92582 3.55626 0.12066 3.45768 24 - -
17915 1.38629 1.38629 1.38629 1.38629
17916 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17917 25 2.92582 3.55626 0.12066 3.45768 25 - -
17918 1.38629 1.38629 1.38629 1.38629
17919 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17920 26 3.39741 0.13455 3.44837 2.80294 26 - -
17921 1.38629 1.38629 1.38629 1.38629
17922 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17923 27 3.05748 2.57532 3.10682 0.18378 27 - -
17924 1.38629 1.38629 1.38629 1.38629
17925 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17926 28 3.39741 0.13455 3.44837 2.80294 28 - -
17927 1.38629 1.38629 1.38629 1.38629
17928 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17929 29 3.05748 2.57532 3.10682 0.18378 29 - -
17930 1.38629 1.38629 1.38629 1.38629
17931 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17932 30 3.05748 2.57532 3.10682 0.18378 30 - -
17933 1.38629 1.38629 1.38629 1.38629
17934 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17935 31 2.92582 3.55626 0.12066 3.45768 31 - -
17936 1.38629 1.38629 1.38629 1.38629
17937 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17938 32 3.39741 0.13455 3.44837 2.80294 32 - -
17939 1.38629 1.38629 1.38629 1.38629
17940 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17941 33 0.14605 3.34931 2.78177 3.24806 33 - -
17942 1.38629 1.38629 1.38629 1.38629
17943 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17944 34 3.05748 2.57532 3.10682 0.18378 34 - -
17945 1.38629 1.38629 1.38629 1.38629
17946 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17947 35 3.39741 0.13455 3.44837 2.80294 35 - -
17948 1.38629 1.38629 1.38629 1.38629
17949 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17950 36 2.92582 3.55626 0.12066 3.45768 36 - -
17951 1.38629 1.38629 1.38629 1.38629
17952 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17953 37 0.14605 3.34931 2.78177 3.24806 37 - -
17954 1.38629 1.38629 1.38629 1.38629
17955 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17956 38 3.05748 2.57532 3.10682 0.18378 38 - -
17957 1.38629 1.38629 1.38629 1.38629
17958 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17959 39 2.92582 3.55626 0.12066 3.45768 39 - -
17960 1.38629 1.38629 1.38629 1.38629
17961 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17962 40 0.14605 3.34931 2.78177 3.24806 40 - -
17963 1.38629 1.38629 1.38629 1.38629
17964 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17965 41 0.14605 3.34931 2.78177 3.24806 41 - -
17966 1.38629 1.38629 1.38629 1.38629
17967 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17968 42 2.92582 3.55626 0.12066 3.45768 42 - -
17969 1.38629 1.38629 1.38629 1.38629
17970 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17971 43 0.14605 3.34931 2.78177 3.24806 43 - -
17972 1.38629 1.38629 1.38629 1.38629
17973 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17974 44 0.14605 3.34931 2.78177 3.24806 44 - -
17975 1.38629 1.38629 1.38629 1.38629
17976 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547
17977 45 3.39741 0.13455 3.44837 2.80294 45 - -
17978 1.38629 1.38629 1.38629 1.38629
17979 0.01895 3.97547 * 1.46634 0.26236 0.00000 *
17980 //
17981 HMMER3/b [3.0 | March 2010]
17982 NAME 2_5.8_Tracheophyta_58S_start_ninec_long
17983 LENG 45
17984 ALPH DNA
17985 RF no
17986 CS no
17987 MAP yes
17988 DATE Fri Feb 17 16:13:12 2012
17989 NSEQ 8
17990 EFFN 3.324219
17991 CKSUM 3298544435
17992 STATS LOCAL MSV -8.1167 0.71931
17993 STATS LOCAL VITERBI -7.6959 0.71931
17994 STATS LOCAL FORWARD -3.8829 0.71931
17995 HMM A C G T
17996 m->m m->i m->d i->m i->i d->m d->d
17997 COMPO 1.40353 1.30597 1.37945 1.46255
17998 1.38629 1.38629 1.38629 1.38629
17999 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 *
18000 1 3.43368 0.13014 3.48311 2.82941 1 - -
18001 1.38629 1.38629 1.38629 1.38629
18002 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18003 2 2.94787 3.58825 0.11710 3.49298 2 - -
18004 1.38629 1.38629 1.38629 1.38629
18005 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18006 3 0.14183 3.38075 2.80224 3.28247 3 - -
18007 1.38629 1.38629 1.38629 1.38629
18008 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18009 4 3.43368 0.13014 3.48311 2.82941 4 - -
18010 1.38629 1.38629 1.38629 1.38629
18011 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18012 5 3.08911 2.59546 3.13724 0.17860 5 - -
18013 1.38629 1.38629 1.38629 1.38629
18014 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18015 6 3.43368 0.13014 3.48311 2.82941 6 - -
18016 1.38629 1.38629 1.38629 1.38629
18017 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18018 7 3.08911 2.59546 3.13724 0.17860 7 - -
18019 1.38629 1.38629 1.38629 1.38629
18020 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18021 8 3.43368 0.13014 3.48311 2.82941 8 - -
18022 1.38629 1.38629 1.38629 1.38629
18023 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18024 9 2.94787 3.58825 0.11710 3.49298 9 - -
18025 1.38629 1.38629 1.38629 1.38629
18026 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18027 10 2.94787 3.58825 0.11710 3.49298 10 - -
18028 1.38629 1.38629 1.38629 1.38629
18029 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18030 11 3.43368 0.13014 3.48311 2.82941 11 - -
18031 1.38629 1.38629 1.38629 1.38629
18032 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18033 12 0.14183 3.38075 2.80224 3.28247 12 - -
18034 1.38629 1.38629 1.38629 1.38629
18035 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18036 13 0.14183 3.38075 2.80224 3.28247 13 - -
18037 1.38629 1.38629 1.38629 1.38629
18038 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18039 14 3.43368 0.13014 3.48311 2.82941 14 - -
18040 1.38629 1.38629 1.38629 1.38629
18041 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18042 15 2.94787 3.58825 0.11710 3.49298 15 - -
18043 1.38629 1.38629 1.38629 1.38629
18044 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18045 16 2.94787 3.58825 0.11710 3.49298 16 - -
18046 1.38629 1.38629 1.38629 1.38629
18047 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18048 17 0.14183 3.38075 2.80224 3.28247 17 - -
18049 1.38629 1.38629 1.38629 1.38629
18050 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18051 18 3.08911 2.59546 3.13724 0.17860 18 - -
18052 1.38629 1.38629 1.38629 1.38629
18053 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18054 19 0.14183 3.38075 2.80224 3.28247 19 - -
18055 1.38629 1.38629 1.38629 1.38629
18056 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18057 20 3.08911 2.59546 3.13724 0.17860 20 - -
18058 1.38629 1.38629 1.38629 1.38629
18059 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18060 21 3.43368 0.13014 3.48311 2.82941 21 - -
18061 1.38629 1.38629 1.38629 1.38629
18062 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18063 22 3.08911 2.59546 3.13724 0.17860 22 - -
18064 1.38629 1.38629 1.38629 1.38629
18065 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18066 23 2.46372 1.24860 2.53351 0.60039 23 - -
18067 1.38629 1.38629 1.38629 1.38629
18068 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18069 24 2.94787 3.58825 0.11710 3.49298 24 - -
18070 1.38629 1.38629 1.38629 1.38629
18071 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18072 25 2.94787 3.58825 0.11710 3.49298 25 - -
18073 1.38629 1.38629 1.38629 1.38629
18074 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18075 26 3.08911 2.59546 3.13724 0.17860 26 - -
18076 1.38629 1.38629 1.38629 1.38629
18077 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18078 27 3.08911 2.59546 3.13724 0.17860 27 - -
18079 1.38629 1.38629 1.38629 1.38629
18080 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18081 28 3.43368 0.13014 3.48311 2.82941 28 - -
18082 1.38629 1.38629 1.38629 1.38629
18083 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18084 29 3.08911 2.59546 3.13724 0.17860 29 - -
18085 1.38629 1.38629 1.38629 1.38629
18086 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18087 30 3.43368 0.13014 3.48311 2.82941 30 - -
18088 1.38629 1.38629 1.38629 1.38629
18089 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18090 31 2.94787 3.58825 0.11710 3.49298 31 - -
18091 1.38629 1.38629 1.38629 1.38629
18092 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18093 32 3.43368 0.13014 3.48311 2.82941 32 - -
18094 1.38629 1.38629 1.38629 1.38629
18095 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18096 33 0.14183 3.38075 2.80224 3.28247 33 - -
18097 1.38629 1.38629 1.38629 1.38629
18098 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18099 34 3.08911 2.59546 3.13724 0.17860 34 - -
18100 1.38629 1.38629 1.38629 1.38629
18101 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18102 35 3.43368 0.13014 3.48311 2.82941 35 - -
18103 1.38629 1.38629 1.38629 1.38629
18104 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18105 36 2.94787 3.58825 0.11710 3.49298 36 - -
18106 1.38629 1.38629 1.38629 1.38629
18107 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18108 37 0.14183 3.38075 2.80224 3.28247 37 - -
18109 1.38629 1.38629 1.38629 1.38629
18110 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18111 38 3.08911 2.59546 3.13724 0.17860 38 - -
18112 1.38629 1.38629 1.38629 1.38629
18113 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18114 39 2.94787 3.58825 0.11710 3.49298 39 - -
18115 1.38629 1.38629 1.38629 1.38629
18116 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18117 40 0.14183 3.38075 2.80224 3.28247 40 - -
18118 1.38629 1.38629 1.38629 1.38629
18119 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18120 41 0.14183 3.38075 2.80224 3.28247 41 - -
18121 1.38629 1.38629 1.38629 1.38629
18122 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18123 42 2.94787 3.58825 0.11710 3.49298 42 - -
18124 1.38629 1.38629 1.38629 1.38629
18125 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18126 43 0.14183 3.38075 2.80224 3.28247 43 - -
18127 1.38629 1.38629 1.38629 1.38629
18128 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18129 44 0.14183 3.38075 2.80224 3.28247 44 - -
18130 1.38629 1.38629 1.38629 1.38629
18131 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547
18132 45 3.43368 0.13014 3.48311 2.82941 45 - -
18133 1.38629 1.38629 1.38629 1.38629
18134 0.01861 3.99346 * 1.46634 0.26236 0.00000 *
18135 //
18136 HMMER3/b [3.0 | March 2010]
18137 NAME 2_5.8_Tracheophyta_58S_start_nined_long
18138 LENG 45
18139 ALPH DNA
18140 RF no
18141 CS no
18142 MAP yes
18143 DATE Fri Feb 17 16:13:19 2012
18144 NSEQ 2
18145 EFFN 2.000000
18146 CKSUM 1082156861
18147 STATS LOCAL MSV -7.3499 0.72787
18148 STATS LOCAL VITERBI -8.1292 0.72787
18149 STATS LOCAL FORWARD -3.4541 0.72787
18150 HMM A C G T
18151 m->m m->i m->d i->m i->i d->m d->d
18152 COMPO 1.45932 1.34452 1.31900 1.42905
18153 1.38629 1.38629 1.38629 1.38629
18154 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18155 1 2.57915 2.25909 2.64442 0.28946 1 - -
18156 1.38629 1.38629 1.38629 1.38629
18157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18158 2 2.53331 3.02441 0.20344 2.88069 2 - -
18159 1.38629 1.38629 1.38629 1.38629
18160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18161 3 0.23862 2.84929 2.43386 2.70756 3 - -
18162 1.38629 1.38629 1.38629 1.38629
18163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18164 4 2.81865 0.23582 2.88868 2.35662 4 - -
18165 1.38629 1.38629 1.38629 1.38629
18166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18167 5 2.57915 2.25909 2.64442 0.28946 5 - -
18168 1.38629 1.38629 1.38629 1.38629
18169 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18170 6 2.81865 0.23582 2.88868 2.35662 6 - -
18171 1.38629 1.38629 1.38629 1.38629
18172 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18173 7 2.57915 2.25909 2.64442 0.28946 7 - -
18174 1.38629 1.38629 1.38629 1.38629
18175 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18176 8 2.81865 0.23582 2.88868 2.35662 8 - -
18177 1.38629 1.38629 1.38629 1.38629
18178 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18179 9 2.53331 3.02441 0.20344 2.88069 9 - -
18180 1.38629 1.38629 1.38629 1.38629
18181 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18182 10 2.53331 3.02441 0.20344 2.88069 10 - -
18183 1.38629 1.38629 1.38629 1.38629
18184 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18185 11 2.81865 0.23582 2.88868 2.35662 11 - -
18186 1.38629 1.38629 1.38629 1.38629
18187 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18188 12 2.53331 3.02441 0.20344 2.88069 12 - -
18189 1.38629 1.38629 1.38629 1.38629
18190 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18191 13 0.23862 2.84929 2.43386 2.70756 13 - -
18192 1.38629 1.38629 1.38629 1.38629
18193 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18194 14 2.81865 0.23582 2.88868 2.35662 14 - -
18195 1.38629 1.38629 1.38629 1.38629
18196 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18197 15 2.53331 3.02441 0.20344 2.88069 15 - -
18198 1.38629 1.38629 1.38629 1.38629
18199 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18200 16 2.53331 3.02441 0.20344 2.88069 16 - -
18201 1.38629 1.38629 1.38629 1.38629
18202 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18203 17 0.23862 2.84929 2.43386 2.70756 17 - -
18204 1.38629 1.38629 1.38629 1.38629
18205 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18206 18 2.57915 2.25909 2.64442 0.28946 18 - -
18207 1.38629 1.38629 1.38629 1.38629
18208 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18209 19 0.23862 2.84929 2.43386 2.70756 19 - -
18210 1.38629 1.38629 1.38629 1.38629
18211 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18212 20 2.57915 2.25909 2.64442 0.28946 20 - -
18213 1.38629 1.38629 1.38629 1.38629
18214 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18215 21 2.81865 0.23582 2.88868 2.35662 21 - -
18216 1.38629 1.38629 1.38629 1.38629
18217 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18218 22 2.57915 2.25909 2.64442 0.28946 22 - -
18219 1.38629 1.38629 1.38629 1.38629
18220 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18221 23 2.81865 0.23582 2.88868 2.35662 23 - -
18222 1.38629 1.38629 1.38629 1.38629
18223 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18224 24 2.53331 3.02441 0.20344 2.88069 24 - -
18225 1.38629 1.38629 1.38629 1.38629
18226 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18227 25 2.53331 3.02441 0.20344 2.88069 25 - -
18228 1.38629 1.38629 1.38629 1.38629
18229 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18230 26 2.81865 0.23582 2.88868 2.35662 26 - -
18231 1.38629 1.38629 1.38629 1.38629
18232 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18233 27 2.57915 2.25909 2.64442 0.28946 27 - -
18234 1.38629 1.38629 1.38629 1.38629
18235 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18236 28 2.81865 0.23582 2.88868 2.35662 28 - -
18237 1.38629 1.38629 1.38629 1.38629
18238 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18239 29 2.57915 2.25909 2.64442 0.28946 29 - -
18240 1.38629 1.38629 1.38629 1.38629
18241 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18242 30 2.57915 2.25909 2.64442 0.28946 30 - -
18243 1.38629 1.38629 1.38629 1.38629
18244 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18245 31 2.53331 3.02441 0.20344 2.88069 31 - -
18246 1.38629 1.38629 1.38629 1.38629
18247 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18248 32 2.81865 0.23582 2.88868 2.35662 32 - -
18249 1.38629 1.38629 1.38629 1.38629
18250 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18251 33 0.23862 2.84929 2.43386 2.70756 33 - -
18252 1.38629 1.38629 1.38629 1.38629
18253 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18254 34 2.57915 2.25909 2.64442 0.28946 34 - -
18255 1.38629 1.38629 1.38629 1.38629
18256 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18257 35 2.81865 0.23582 2.88868 2.35662 35 - -
18258 1.38629 1.38629 1.38629 1.38629
18259 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18260 36 2.53331 3.02441 0.20344 2.88069 36 - -
18261 1.38629 1.38629 1.38629 1.38629
18262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18263 37 0.23862 2.84929 2.43386 2.70756 37 - -
18264 1.38629 1.38629 1.38629 1.38629
18265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18266 38 2.57915 2.25909 2.64442 0.28946 38 - -
18267 1.38629 1.38629 1.38629 1.38629
18268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18269 39 2.53331 3.02441 0.20344 2.88069 39 - -
18270 1.38629 1.38629 1.38629 1.38629
18271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18272 40 0.23862 2.84929 2.43386 2.70756 40 - -
18273 1.38629 1.38629 1.38629 1.38629
18274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18275 41 0.23862 2.84929 2.43386 2.70756 41 - -
18276 1.38629 1.38629 1.38629 1.38629
18277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18278 42 2.53331 3.02441 0.20344 2.88069 42 - -
18279 1.38629 1.38629 1.38629 1.38629
18280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18281 43 0.23862 2.84929 2.43386 2.70756 43 - -
18282 1.38629 1.38629 1.38629 1.38629
18283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18284 44 0.23862 2.84929 2.43386 2.70756 44 - -
18285 1.38629 1.38629 1.38629 1.38629
18286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18287 45 2.81865 0.23582 2.88868 2.35662 45 - -
18288 1.38629 1.38629 1.38629 1.38629
18289 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18290 //
18291 HMMER3/b [3.0 | March 2010]
18292 NAME 2_5.8_Tracheophyta_58S_start_ninee_long
18293 LENG 45
18294 ALPH DNA
18295 RF no
18296 CS no
18297 MAP yes
18298 DATE Fri Feb 17 16:13:26 2012
18299 NSEQ 6
18300 EFFN 3.231445
18301 CKSUM 4098161730
18302 STATS LOCAL MSV -8.0790 0.71932
18303 STATS LOCAL VITERBI -7.6106 0.71932
18304 STATS LOCAL FORWARD -4.0689 0.71932
18305 HMM A C G T
18306 m->m m->i m->d i->m i->i d->m d->d
18307 COMPO 1.40654 1.32502 1.38182 1.43509
18308 1.38629 1.38629 1.38629 1.38629
18309 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 *
18310 1 3.05877 2.57614 3.10806 0.18356 1 - -
18311 1.38629 1.38629 1.38629 1.38629
18312 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18313 2 2.92673 3.55757 0.12052 3.45913 2 - -
18314 1.38629 1.38629 1.38629 1.38629
18315 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18316 3 0.14587 3.35060 2.78262 3.24948 3 - -
18317 1.38629 1.38629 1.38629 1.38629
18318 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18319 4 3.39890 0.13436 3.44980 2.80403 4 - -
18320 1.38629 1.38629 1.38629 1.38629
18321 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18322 5 3.05877 2.57614 3.10806 0.18356 5 - -
18323 1.38629 1.38629 1.38629 1.38629
18324 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18325 6 3.39890 0.13436 3.44980 2.80403 6 - -
18326 1.38629 1.38629 1.38629 1.38629
18327 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18328 7 3.05877 2.57614 3.10806 0.18356 7 - -
18329 1.38629 1.38629 1.38629 1.38629
18330 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18331 8 3.39890 0.13436 3.44980 2.80403 8 - -
18332 1.38629 1.38629 1.38629 1.38629
18333 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18334 9 2.92673 3.55757 0.12052 3.45913 9 - -
18335 1.38629 1.38629 1.38629 1.38629
18336 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18337 10 2.92673 3.55757 0.12052 3.45913 10 - -
18338 1.38629 1.38629 1.38629 1.38629
18339 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18340 11 3.39890 0.13436 3.44980 2.80403 11 - -
18341 1.38629 1.38629 1.38629 1.38629
18342 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18343 12 0.14587 3.35060 2.78262 3.24948 12 - -
18344 1.38629 1.38629 1.38629 1.38629
18345 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18346 13 0.14587 3.35060 2.78262 3.24948 13 - -
18347 1.38629 1.38629 1.38629 1.38629
18348 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18349 14 3.39890 0.13436 3.44980 2.80403 14 - -
18350 1.38629 1.38629 1.38629 1.38629
18351 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18352 15 2.92673 3.55757 0.12052 3.45913 15 - -
18353 1.38629 1.38629 1.38629 1.38629
18354 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18355 16 2.92673 3.55757 0.12052 3.45913 16 - -
18356 1.38629 1.38629 1.38629 1.38629
18357 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18358 17 0.14587 3.35060 2.78262 3.24948 17 - -
18359 1.38629 1.38629 1.38629 1.38629
18360 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18361 18 3.05877 2.57614 3.10806 0.18356 18 - -
18362 1.38629 1.38629 1.38629 1.38629
18363 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18364 19 0.14587 3.35060 2.78262 3.24948 19 - -
18365 1.38629 1.38629 1.38629 1.38629
18366 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18367 20 3.05877 2.57614 3.10806 0.18356 20 - -
18368 1.38629 1.38629 1.38629 1.38629
18369 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18370 21 3.39890 0.13436 3.44980 2.80403 21 - -
18371 1.38629 1.38629 1.38629 1.38629
18372 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18373 22 3.05877 2.57614 3.10806 0.18356 22 - -
18374 1.38629 1.38629 1.38629 1.38629
18375 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18376 23 3.39890 0.13436 3.44980 2.80403 23 - -
18377 1.38629 1.38629 1.38629 1.38629
18378 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18379 24 2.92673 3.55757 0.12052 3.45913 24 - -
18380 1.38629 1.38629 1.38629 1.38629
18381 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18382 25 2.92673 3.55757 0.12052 3.45913 25 - -
18383 1.38629 1.38629 1.38629 1.38629
18384 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18385 26 3.39890 0.13436 3.44980 2.80403 26 - -
18386 1.38629 1.38629 1.38629 1.38629
18387 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18388 27 3.05877 2.57614 3.10806 0.18356 27 - -
18389 1.38629 1.38629 1.38629 1.38629
18390 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18391 28 3.39890 0.13436 3.44980 2.80403 28 - -
18392 1.38629 1.38629 1.38629 1.38629
18393 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18394 29 3.05877 2.57614 3.10806 0.18356 29 - -
18395 1.38629 1.38629 1.38629 1.38629
18396 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18397 30 3.05877 2.57614 3.10806 0.18356 30 - -
18398 1.38629 1.38629 1.38629 1.38629
18399 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18400 31 2.92673 3.55757 0.12052 3.45913 31 - -
18401 1.38629 1.38629 1.38629 1.38629
18402 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18403 32 3.39890 0.13436 3.44980 2.80403 32 - -
18404 1.38629 1.38629 1.38629 1.38629
18405 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18406 33 0.14587 3.35060 2.78262 3.24948 33 - -
18407 1.38629 1.38629 1.38629 1.38629
18408 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18409 34 3.05877 2.57614 3.10806 0.18356 34 - -
18410 1.38629 1.38629 1.38629 1.38629
18411 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18412 35 3.39890 0.13436 3.44980 2.80403 35 - -
18413 1.38629 1.38629 1.38629 1.38629
18414 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18415 36 2.92673 3.55757 0.12052 3.45913 36 - -
18416 1.38629 1.38629 1.38629 1.38629
18417 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18418 37 0.14587 3.35060 2.78262 3.24948 37 - -
18419 1.38629 1.38629 1.38629 1.38629
18420 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18421 38 3.05877 2.57614 3.10806 0.18356 38 - -
18422 1.38629 1.38629 1.38629 1.38629
18423 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18424 39 2.92673 3.55757 0.12052 3.45913 39 - -
18425 1.38629 1.38629 1.38629 1.38629
18426 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18427 40 0.14587 3.35060 2.78262 3.24948 40 - -
18428 1.38629 1.38629 1.38629 1.38629
18429 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18430 41 0.14587 3.35060 2.78262 3.24948 41 - -
18431 1.38629 1.38629 1.38629 1.38629
18432 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18433 42 2.92673 3.55757 0.12052 3.45913 42 - -
18434 1.38629 1.38629 1.38629 1.38629
18435 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18436 43 0.14587 3.35060 2.78262 3.24948 43 - -
18437 1.38629 1.38629 1.38629 1.38629
18438 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18439 44 0.14587 3.35060 2.78262 3.24948 44 - -
18440 1.38629 1.38629 1.38629 1.38629
18441 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547
18442 45 3.39890 0.13436 3.44980 2.80403 45 - -
18443 1.38629 1.38629 1.38629 1.38629
18444 0.01893 3.97621 * 1.46634 0.26236 0.00000 *
18445 //
18446 HMMER3/b [3.0 | March 2010]
18447 NAME 2_5.8_Tracheophyta_58S_start_ninef_long
18448 LENG 45
18449 ALPH DNA
18450 RF no
18451 CS no
18452 MAP yes
18453 DATE Fri Feb 17 16:13:31 2012
18454 NSEQ 10
18455 EFFN 3.325195
18456 CKSUM 4174405568
18457 STATS LOCAL MSV -8.2243 0.71932
18458 STATS LOCAL VITERBI -7.7459 0.71932
18459 STATS LOCAL FORWARD -3.8937 0.71932
18460 HMM A C G T
18461 m->m m->i m->d i->m i->i d->m d->d
18462 COMPO 1.37952 1.26100 1.37730 1.54801
18463 1.38629 1.38629 1.38629 1.38629
18464 0.03687 4.01190 4.01190 1.46634 0.26236 0.00000 *
18465 1 0.97492 2.14294 2.15833 0.94174 1 - -
18466 1.38629 1.38629 1.38629 1.38629
18467 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18468 2 2.94809 3.58857 0.11707 3.49333 2 - -
18469 1.38629 1.38629 1.38629 1.38629
18470 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18471 3 0.14179 3.38107 2.80245 3.28281 3 - -
18472 1.38629 1.38629 1.38629 1.38629
18473 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18474 4 3.43404 0.13010 3.48346 2.82967 4 - -
18475 1.38629 1.38629 1.38629 1.38629
18476 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18477 5 3.08942 2.59566 3.13755 0.17855 5 - -
18478 1.38629 1.38629 1.38629 1.38629
18479 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18480 6 3.43404 0.13010 3.48346 2.82967 6 - -
18481 1.38629 1.38629 1.38629 1.38629
18482 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18483 7 3.08942 2.59566 3.13755 0.17855 7 - -
18484 1.38629 1.38629 1.38629 1.38629
18485 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18486 8 3.43404 0.13010 3.48346 2.82967 8 - -
18487 1.38629 1.38629 1.38629 1.38629
18488 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18489 9 2.94809 3.58857 0.11707 3.49333 9 - -
18490 1.38629 1.38629 1.38629 1.38629
18491 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18492 10 2.94809 3.58857 0.11707 3.49333 10 - -
18493 1.38629 1.38629 1.38629 1.38629
18494 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18495 11 3.43404 0.13010 3.48346 2.82967 11 - -
18496 1.38629 1.38629 1.38629 1.38629
18497 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18498 12 0.14179 3.38107 2.80245 3.28281 12 - -
18499 1.38629 1.38629 1.38629 1.38629
18500 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18501 13 0.14179 3.38107 2.80245 3.28281 13 - -
18502 1.38629 1.38629 1.38629 1.38629
18503 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18504 14 3.43404 0.13010 3.48346 2.82967 14 - -
18505 1.38629 1.38629 1.38629 1.38629
18506 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18507 15 2.94809 3.58857 0.11707 3.49333 15 - -
18508 1.38629 1.38629 1.38629 1.38629
18509 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18510 16 2.94809 3.58857 0.11707 3.49333 16 - -
18511 1.38629 1.38629 1.38629 1.38629
18512 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18513 17 0.14179 3.38107 2.80245 3.28281 17 - -
18514 1.38629 1.38629 1.38629 1.38629
18515 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18516 18 3.08942 2.59566 3.13755 0.17855 18 - -
18517 1.38629 1.38629 1.38629 1.38629
18518 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18519 19 0.14179 3.38107 2.80245 3.28281 19 - -
18520 1.38629 1.38629 1.38629 1.38629
18521 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18522 20 3.08942 2.59566 3.13755 0.17855 20 - -
18523 1.38629 1.38629 1.38629 1.38629
18524 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18525 21 3.43404 0.13010 3.48346 2.82967 21 - -
18526 1.38629 1.38629 1.38629 1.38629
18527 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18528 22 3.08942 2.59566 3.13755 0.17855 22 - -
18529 1.38629 1.38629 1.38629 1.38629
18530 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18531 23 3.43404 0.13010 3.48346 2.82967 23 - -
18532 1.38629 1.38629 1.38629 1.38629
18533 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18534 24 2.94809 3.58857 0.11707 3.49333 24 - -
18535 1.38629 1.38629 1.38629 1.38629
18536 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18537 25 2.94809 3.58857 0.11707 3.49333 25 - -
18538 1.38629 1.38629 1.38629 1.38629
18539 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18540 26 3.43404 0.13010 3.48346 2.82967 26 - -
18541 1.38629 1.38629 1.38629 1.38629
18542 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18543 27 3.08942 2.59566 3.13755 0.17855 27 - -
18544 1.38629 1.38629 1.38629 1.38629
18545 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18546 28 3.43404 0.13010 3.48346 2.82967 28 - -
18547 1.38629 1.38629 1.38629 1.38629
18548 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18549 29 3.08942 2.59566 3.13755 0.17855 29 - -
18550 1.38629 1.38629 1.38629 1.38629
18551 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18552 30 3.43404 0.13010 3.48346 2.82967 30 - -
18553 1.38629 1.38629 1.38629 1.38629
18554 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18555 31 2.94809 3.58857 0.11707 3.49333 31 - -
18556 1.38629 1.38629 1.38629 1.38629
18557 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18558 32 3.43404 0.13010 3.48346 2.82967 32 - -
18559 1.38629 1.38629 1.38629 1.38629
18560 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18561 33 0.14179 3.38107 2.80245 3.28281 33 - -
18562 1.38629 1.38629 1.38629 1.38629
18563 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18564 34 3.08942 2.59566 3.13755 0.17855 34 - -
18565 1.38629 1.38629 1.38629 1.38629
18566 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18567 35 3.43404 0.13010 3.48346 2.82967 35 - -
18568 1.38629 1.38629 1.38629 1.38629
18569 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18570 36 2.94809 3.58857 0.11707 3.49333 36 - -
18571 1.38629 1.38629 1.38629 1.38629
18572 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18573 37 0.14179 3.38107 2.80245 3.28281 37 - -
18574 1.38629 1.38629 1.38629 1.38629
18575 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18576 38 3.08942 2.59566 3.13755 0.17855 38 - -
18577 1.38629 1.38629 1.38629 1.38629
18578 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18579 39 2.94809 3.58857 0.11707 3.49333 39 - -
18580 1.38629 1.38629 1.38629 1.38629
18581 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18582 40 0.14179 3.38107 2.80245 3.28281 40 - -
18583 1.38629 1.38629 1.38629 1.38629
18584 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18585 41 0.14179 3.38107 2.80245 3.28281 41 - -
18586 1.38629 1.38629 1.38629 1.38629
18587 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18588 42 2.94809 3.58857 0.11707 3.49333 42 - -
18589 1.38629 1.38629 1.38629 1.38629
18590 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18591 43 0.14179 3.38107 2.80245 3.28281 43 - -
18592 1.38629 1.38629 1.38629 1.38629
18593 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18594 44 0.14179 3.38107 2.80245 3.28281 44 - -
18595 1.38629 1.38629 1.38629 1.38629
18596 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
18597 45 3.43404 0.13010 3.48346 2.82967 45 - -
18598 1.38629 1.38629 1.38629 1.38629
18599 0.01860 3.99364 * 1.46634 0.26236 0.00000 *
18600 //
18601 HMMER3/b [3.0 | March 2010]
18602 NAME 2_5.8_Tracheophyta_58S_start_nineg_long
18603 LENG 45
18604 ALPH DNA
18605 RF no
18606 CS no
18607 MAP yes
18608 DATE Fri Feb 17 16:13:36 2012
18609 NSEQ 25
18610 EFFN 3.213501
18611 CKSUM 1199603924
18612 STATS LOCAL MSV -8.0844 0.71932
18613 STATS LOCAL VITERBI -7.5542 0.71932
18614 STATS LOCAL FORWARD -4.1984 0.71932
18615 HMM A C G T
18616 m->m m->i m->d i->m i->i d->m d->d
18617 COMPO 1.34047 1.32612 1.38036 1.50831
18618 1.38629 1.38629 1.38629 1.38629
18619 0.03764 3.99148 3.99148 1.46634 0.26236 0.00000 *
18620 1 3.39204 0.13522 3.44322 2.79900 1 - -
18621 1.38629 1.38629 1.38629 1.38629
18622 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18623 2 2.92253 3.55151 0.12120 3.45245 2 - -
18624 1.38629 1.38629 1.38629 1.38629
18625 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18626 3 0.14669 3.34466 2.77874 3.24298 3 - -
18627 1.38629 1.38629 1.38629 1.38629
18628 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18629 4 3.39204 0.13522 3.44322 2.79900 4 - -
18630 1.38629 1.38629 1.38629 1.38629
18631 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18632 5 3.05282 2.57235 3.10233 0.18456 5 - -
18633 1.38629 1.38629 1.38629 1.38629
18634 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18635 6 3.39204 0.13522 3.44322 2.79900 6 - -
18636 1.38629 1.38629 1.38629 1.38629
18637 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18638 7 3.05282 2.57235 3.10233 0.18456 7 - -
18639 1.38629 1.38629 1.38629 1.38629
18640 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18641 8 3.39204 0.13522 3.44322 2.79900 8 - -
18642 1.38629 1.38629 1.38629 1.38629
18643 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18644 9 2.92253 3.55151 0.12120 3.45245 9 - -
18645 1.38629 1.38629 1.38629 1.38629
18646 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18647 10 2.92253 3.55151 0.12120 3.45245 10 - -
18648 1.38629 1.38629 1.38629 1.38629
18649 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18650 11 3.39204 0.13522 3.44322 2.79900 11 - -
18651 1.38629 1.38629 1.38629 1.38629
18652 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18653 12 0.14669 3.34466 2.77874 3.24298 12 - -
18654 1.38629 1.38629 1.38629 1.38629
18655 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18656 13 0.14669 3.34466 2.77874 3.24298 13 - -
18657 1.38629 1.38629 1.38629 1.38629
18658 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18659 14 3.39204 0.13522 3.44322 2.79900 14 - -
18660 1.38629 1.38629 1.38629 1.38629
18661 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18662 15 2.92253 3.55151 0.12120 3.45245 15 - -
18663 1.38629 1.38629 1.38629 1.38629
18664 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18665 16 2.92253 3.55151 0.12120 3.45245 16 - -
18666 1.38629 1.38629 1.38629 1.38629
18667 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18668 17 0.14669 3.34466 2.77874 3.24298 17 - -
18669 1.38629 1.38629 1.38629 1.38629
18670 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18671 18 3.05282 2.57235 3.10233 0.18456 18 - -
18672 1.38629 1.38629 1.38629 1.38629
18673 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18674 19 0.14669 3.34466 2.77874 3.24298 19 - -
18675 1.38629 1.38629 1.38629 1.38629
18676 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18677 20 3.05282 2.57235 3.10233 0.18456 20 - -
18678 1.38629 1.38629 1.38629 1.38629
18679 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18680 21 3.39204 0.13522 3.44322 2.79900 21 - -
18681 1.38629 1.38629 1.38629 1.38629
18682 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18683 22 3.05282 2.57235 3.10233 0.18456 22 - -
18684 1.38629 1.38629 1.38629 1.38629
18685 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18686 23 0.14669 3.34466 2.77874 3.24298 23 - -
18687 1.38629 1.38629 1.38629 1.38629
18688 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18689 24 2.92253 3.55151 0.12120 3.45245 24 - -
18690 1.38629 1.38629 1.38629 1.38629
18691 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18692 25 2.92253 3.55151 0.12120 3.45245 25 - -
18693 1.38629 1.38629 1.38629 1.38629
18694 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18695 26 3.39204 0.13522 3.44322 2.79900 26 - -
18696 1.38629 1.38629 1.38629 1.38629
18697 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18698 27 3.05282 2.57235 3.10233 0.18456 27 - -
18699 1.38629 1.38629 1.38629 1.38629
18700 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18701 28 3.39204 0.13522 3.44322 2.79900 28 - -
18702 1.38629 1.38629 1.38629 1.38629
18703 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18704 29 3.05282 2.57235 3.10233 0.18456 29 - -
18705 1.38629 1.38629 1.38629 1.38629
18706 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18707 30 3.05282 2.57235 3.10233 0.18456 30 - -
18708 1.38629 1.38629 1.38629 1.38629
18709 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18710 31 2.92253 3.55151 0.12120 3.45245 31 - -
18711 1.38629 1.38629 1.38629 1.38629
18712 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18713 32 3.39204 0.13522 3.44322 2.79900 32 - -
18714 1.38629 1.38629 1.38629 1.38629
18715 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18716 33 0.14669 3.34466 2.77874 3.24298 33 - -
18717 1.38629 1.38629 1.38629 1.38629
18718 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18719 34 3.05282 2.57235 3.10233 0.18456 34 - -
18720 1.38629 1.38629 1.38629 1.38629
18721 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18722 35 3.39204 0.13522 3.44322 2.79900 35 - -
18723 1.38629 1.38629 1.38629 1.38629
18724 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18725 36 2.92253 3.55151 0.12120 3.45245 36 - -
18726 1.38629 1.38629 1.38629 1.38629
18727 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18728 37 0.14669 3.34466 2.77874 3.24298 37 - -
18729 1.38629 1.38629 1.38629 1.38629
18730 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18731 38 3.05282 2.57235 3.10233 0.18456 38 - -
18732 1.38629 1.38629 1.38629 1.38629
18733 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18734 39 2.92253 3.55151 0.12120 3.45245 39 - -
18735 1.38629 1.38629 1.38629 1.38629
18736 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18737 40 0.14669 3.34466 2.77874 3.24298 40 - -
18738 1.38629 1.38629 1.38629 1.38629
18739 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18740 41 0.14669 3.34466 2.77874 3.24298 41 - -
18741 1.38629 1.38629 1.38629 1.38629
18742 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18743 42 2.92253 3.55151 0.12120 3.45245 42 - -
18744 1.38629 1.38629 1.38629 1.38629
18745 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18746 43 0.14669 3.34466 2.77874 3.24298 43 - -
18747 1.38629 1.38629 1.38629 1.38629
18748 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18749 44 0.14669 3.34466 2.77874 3.24298 44 - -
18750 1.38629 1.38629 1.38629 1.38629
18751 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547
18752 45 3.39204 0.13522 3.44322 2.79900 45 - -
18753 1.38629 1.38629 1.38629 1.38629
18754 0.01900 3.97284 * 1.46634 0.26236 0.00000 *
18755 //
18756 HMMER3/b [3.0 | March 2010]
18757 NAME 2_5.8_Tracheophyta_58S_start_nineh_long
18758 LENG 45
18759 ALPH DNA
18760 RF no
18761 CS no
18762 MAP yes
18763 DATE Fri Feb 17 16:13:41 2012
18764 NSEQ 2
18765 EFFN 2.000000
18766 CKSUM 3988372655
18767 STATS LOCAL MSV -7.3866 0.72804
18768 STATS LOCAL VITERBI -8.1091 0.72804
18769 STATS LOCAL FORWARD -3.4400 0.72804
18770 HMM A C G T
18771 m->m m->i m->d i->m i->i d->m d->d
18772 COMPO 1.34404 1.34309 1.43461 1.42727
18773 1.38629 1.38629 1.38629 1.38629
18774 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18775 1 2.57915 2.25909 2.64442 0.28946 1 - -
18776 1.38629 1.38629 1.38629 1.38629
18777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18778 2 2.53331 3.02441 0.20344 2.88069 2 - -
18779 1.38629 1.38629 1.38629 1.38629
18780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18781 3 0.23862 2.84929 2.43386 2.70756 3 - -
18782 1.38629 1.38629 1.38629 1.38629
18783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18784 4 2.81865 0.23582 2.88868 2.35662 4 - -
18785 1.38629 1.38629 1.38629 1.38629
18786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18787 5 2.57915 2.25909 2.64442 0.28946 5 - -
18788 1.38629 1.38629 1.38629 1.38629
18789 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18790 6 2.81865 0.23582 2.88868 2.35662 6 - -
18791 1.38629 1.38629 1.38629 1.38629
18792 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18793 7 2.57915 2.25909 2.64442 0.28946 7 - -
18794 1.38629 1.38629 1.38629 1.38629
18795 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18796 8 2.81865 0.23582 2.88868 2.35662 8 - -
18797 1.38629 1.38629 1.38629 1.38629
18798 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18799 9 2.53331 3.02441 0.20344 2.88069 9 - -
18800 1.38629 1.38629 1.38629 1.38629
18801 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18802 10 2.53331 3.02441 0.20344 2.88069 10 - -
18803 1.38629 1.38629 1.38629 1.38629
18804 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18805 11 2.81865 0.23582 2.88868 2.35662 11 - -
18806 1.38629 1.38629 1.38629 1.38629
18807 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18808 12 0.23862 2.84929 2.43386 2.70756 12 - -
18809 1.38629 1.38629 1.38629 1.38629
18810 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18811 13 0.23862 2.84929 2.43386 2.70756 13 - -
18812 1.38629 1.38629 1.38629 1.38629
18813 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18814 14 2.81865 0.23582 2.88868 2.35662 14 - -
18815 1.38629 1.38629 1.38629 1.38629
18816 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18817 15 2.53331 3.02441 0.20344 2.88069 15 - -
18818 1.38629 1.38629 1.38629 1.38629
18819 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18820 16 2.53331 3.02441 0.20344 2.88069 16 - -
18821 1.38629 1.38629 1.38629 1.38629
18822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18823 17 0.23862 2.84929 2.43386 2.70756 17 - -
18824 1.38629 1.38629 1.38629 1.38629
18825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18826 18 2.57915 2.25909 2.64442 0.28946 18 - -
18827 1.38629 1.38629 1.38629 1.38629
18828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18829 19 0.23862 2.84929 2.43386 2.70756 19 - -
18830 1.38629 1.38629 1.38629 1.38629
18831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18832 20 2.57915 2.25909 2.64442 0.28946 20 - -
18833 1.38629 1.38629 1.38629 1.38629
18834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18835 21 2.81865 0.23582 2.88868 2.35662 21 - -
18836 1.38629 1.38629 1.38629 1.38629
18837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18838 22 2.57915 2.25909 2.64442 0.28946 22 - -
18839 1.38629 1.38629 1.38629 1.38629
18840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18841 23 2.81865 0.23582 2.88868 2.35662 23 - -
18842 1.38629 1.38629 1.38629 1.38629
18843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18844 24 2.53331 3.02441 0.20344 2.88069 24 - -
18845 1.38629 1.38629 1.38629 1.38629
18846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18847 25 2.53331 3.02441 0.20344 2.88069 25 - -
18848 1.38629 1.38629 1.38629 1.38629
18849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18850 26 2.81865 0.23582 2.88868 2.35662 26 - -
18851 1.38629 1.38629 1.38629 1.38629
18852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18853 27 2.57915 2.25909 2.64442 0.28946 27 - -
18854 1.38629 1.38629 1.38629 1.38629
18855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18856 28 2.81865 0.23582 2.88868 2.35662 28 - -
18857 1.38629 1.38629 1.38629 1.38629
18858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18859 29 2.57915 2.25909 2.64442 0.28946 29 - -
18860 1.38629 1.38629 1.38629 1.38629
18861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18862 30 2.57915 2.25909 2.64442 0.28946 30 - -
18863 1.38629 1.38629 1.38629 1.38629
18864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18865 31 0.23862 2.84929 2.43386 2.70756 31 - -
18866 1.38629 1.38629 1.38629 1.38629
18867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18868 32 2.81865 0.23582 2.88868 2.35662 32 - -
18869 1.38629 1.38629 1.38629 1.38629
18870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18871 33 0.23862 2.84929 2.43386 2.70756 33 - -
18872 1.38629 1.38629 1.38629 1.38629
18873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18874 34 2.57915 2.25909 2.64442 0.28946 34 - -
18875 1.38629 1.38629 1.38629 1.38629
18876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18877 35 2.81865 0.23582 2.88868 2.35662 35 - -
18878 1.38629 1.38629 1.38629 1.38629
18879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18880 36 2.53331 3.02441 0.20344 2.88069 36 - -
18881 1.38629 1.38629 1.38629 1.38629
18882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18883 37 0.23862 2.84929 2.43386 2.70756 37 - -
18884 1.38629 1.38629 1.38629 1.38629
18885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18886 38 2.57915 2.25909 2.64442 0.28946 38 - -
18887 1.38629 1.38629 1.38629 1.38629
18888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18889 39 2.53331 3.02441 0.20344 2.88069 39 - -
18890 1.38629 1.38629 1.38629 1.38629
18891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18892 40 0.23862 2.84929 2.43386 2.70756 40 - -
18893 1.38629 1.38629 1.38629 1.38629
18894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18895 41 0.23862 2.84929 2.43386 2.70756 41 - -
18896 1.38629 1.38629 1.38629 1.38629
18897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18898 42 2.53331 3.02441 0.20344 2.88069 42 - -
18899 1.38629 1.38629 1.38629 1.38629
18900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18901 43 0.23862 2.84929 2.43386 2.70756 43 - -
18902 1.38629 1.38629 1.38629 1.38629
18903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18904 44 0.23862 2.84929 2.43386 2.70756 44 - -
18905 1.38629 1.38629 1.38629 1.38629
18906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18907 45 2.81865 0.23582 2.88868 2.35662 45 - -
18908 1.38629 1.38629 1.38629 1.38629
18909 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
18910 //
18911 HMMER3/b [3.0 | March 2010]
18912 NAME 2_5.8_Tracheophyta_58S_start_ninei_long
18913 LENG 45
18914 ALPH DNA
18915 RF no
18916 CS no
18917 MAP yes
18918 DATE Fri Feb 17 16:13:47 2012
18919 NSEQ 2
18920 EFFN 2.000000
18921 CKSUM 3812300370
18922 STATS LOCAL MSV -7.4061 0.72764
18923 STATS LOCAL VITERBI -8.1319 0.72764
18924 STATS LOCAL FORWARD -3.4528 0.72764
18925 HMM A C G T
18926 m->m m->i m->d i->m i->i d->m d->d
18927 COMPO 1.46216 1.24196 1.32139 1.54796
18928 1.38629 1.38629 1.38629 1.38629
18929 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
18930 1 2.81865 0.23582 2.88868 2.35662 1 - -
18931 1.38629 1.38629 1.38629 1.38629
18932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18933 2 2.53331 3.02441 0.20344 2.88069 2 - -
18934 1.38629 1.38629 1.38629 1.38629
18935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18936 3 0.23862 2.84929 2.43386 2.70756 3 - -
18937 1.38629 1.38629 1.38629 1.38629
18938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18939 4 2.81865 0.23582 2.88868 2.35662 4 - -
18940 1.38629 1.38629 1.38629 1.38629
18941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18942 5 2.57915 2.25909 2.64442 0.28946 5 - -
18943 1.38629 1.38629 1.38629 1.38629
18944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18945 6 2.81865 0.23582 2.88868 2.35662 6 - -
18946 1.38629 1.38629 1.38629 1.38629
18947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18948 7 2.81865 0.23582 2.88868 2.35662 7 - -
18949 1.38629 1.38629 1.38629 1.38629
18950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18951 8 2.81865 0.23582 2.88868 2.35662 8 - -
18952 1.38629 1.38629 1.38629 1.38629
18953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18954 9 2.53331 3.02441 0.20344 2.88069 9 - -
18955 1.38629 1.38629 1.38629 1.38629
18956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18957 10 2.53331 3.02441 0.20344 2.88069 10 - -
18958 1.38629 1.38629 1.38629 1.38629
18959 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18960 11 2.81865 0.23582 2.88868 2.35662 11 - -
18961 1.38629 1.38629 1.38629 1.38629
18962 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18963 12 0.23862 2.84929 2.43386 2.70756 12 - -
18964 1.38629 1.38629 1.38629 1.38629
18965 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18966 13 0.23862 2.84929 2.43386 2.70756 13 - -
18967 1.38629 1.38629 1.38629 1.38629
18968 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18969 14 2.81865 0.23582 2.88868 2.35662 14 - -
18970 1.38629 1.38629 1.38629 1.38629
18971 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18972 15 2.53331 3.02441 0.20344 2.88069 15 - -
18973 1.38629 1.38629 1.38629 1.38629
18974 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18975 16 2.53331 3.02441 0.20344 2.88069 16 - -
18976 1.38629 1.38629 1.38629 1.38629
18977 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18978 17 0.23862 2.84929 2.43386 2.70756 17 - -
18979 1.38629 1.38629 1.38629 1.38629
18980 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18981 18 2.57915 2.25909 2.64442 0.28946 18 - -
18982 1.38629 1.38629 1.38629 1.38629
18983 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18984 19 0.23862 2.84929 2.43386 2.70756 19 - -
18985 1.38629 1.38629 1.38629 1.38629
18986 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18987 20 2.57915 2.25909 2.64442 0.28946 20 - -
18988 1.38629 1.38629 1.38629 1.38629
18989 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18990 21 2.81865 0.23582 2.88868 2.35662 21 - -
18991 1.38629 1.38629 1.38629 1.38629
18992 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18993 22 2.57915 2.25909 2.64442 0.28946 22 - -
18994 1.38629 1.38629 1.38629 1.38629
18995 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18996 23 2.81865 0.23582 2.88868 2.35662 23 - -
18997 1.38629 1.38629 1.38629 1.38629
18998 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
18999 24 2.53331 3.02441 0.20344 2.88069 24 - -
19000 1.38629 1.38629 1.38629 1.38629
19001 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19002 25 2.53331 3.02441 0.20344 2.88069 25 - -
19003 1.38629 1.38629 1.38629 1.38629
19004 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19005 26 2.81865 0.23582 2.88868 2.35662 26 - -
19006 1.38629 1.38629 1.38629 1.38629
19007 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19008 27 2.57915 2.25909 2.64442 0.28946 27 - -
19009 1.38629 1.38629 1.38629 1.38629
19010 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19011 28 2.81865 0.23582 2.88868 2.35662 28 - -
19012 1.38629 1.38629 1.38629 1.38629
19013 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19014 29 2.57915 2.25909 2.64442 0.28946 29 - -
19015 1.38629 1.38629 1.38629 1.38629
19016 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19017 30 2.57915 2.25909 2.64442 0.28946 30 - -
19018 1.38629 1.38629 1.38629 1.38629
19019 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19020 31 2.53331 3.02441 0.20344 2.88069 31 - -
19021 1.38629 1.38629 1.38629 1.38629
19022 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19023 32 2.81865 0.23582 2.88868 2.35662 32 - -
19024 1.38629 1.38629 1.38629 1.38629
19025 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19026 33 0.23862 2.84929 2.43386 2.70756 33 - -
19027 1.38629 1.38629 1.38629 1.38629
19028 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19029 34 2.57915 2.25909 2.64442 0.28946 34 - -
19030 1.38629 1.38629 1.38629 1.38629
19031 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19032 35 2.81865 0.23582 2.88868 2.35662 35 - -
19033 1.38629 1.38629 1.38629 1.38629
19034 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19035 36 2.53331 3.02441 0.20344 2.88069 36 - -
19036 1.38629 1.38629 1.38629 1.38629
19037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19038 37 2.53331 3.02441 0.20344 2.88069 37 - -
19039 1.38629 1.38629 1.38629 1.38629
19040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19041 38 2.57915 2.25909 2.64442 0.28946 38 - -
19042 1.38629 1.38629 1.38629 1.38629
19043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19044 39 2.53331 3.02441 0.20344 2.88069 39 - -
19045 1.38629 1.38629 1.38629 1.38629
19046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19047 40 0.23862 2.84929 2.43386 2.70756 40 - -
19048 1.38629 1.38629 1.38629 1.38629
19049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19050 41 0.23862 2.84929 2.43386 2.70756 41 - -
19051 1.38629 1.38629 1.38629 1.38629
19052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19053 42 2.53331 3.02441 0.20344 2.88069 42 - -
19054 1.38629 1.38629 1.38629 1.38629
19055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19056 43 0.23862 2.84929 2.43386 2.70756 43 - -
19057 1.38629 1.38629 1.38629 1.38629
19058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19059 44 0.23862 2.84929 2.43386 2.70756 44 - -
19060 1.38629 1.38629 1.38629 1.38629
19061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19062 45 2.81865 0.23582 2.88868 2.35662 45 - -
19063 1.38629 1.38629 1.38629 1.38629
19064 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19065 //
19066 HMMER3/b [3.0 | March 2010]
19067 NAME 2_5.8_Tracheophyta_58S_start_ninej_long
19068 LENG 45
19069 ALPH DNA
19070 RF no
19071 CS no
19072 MAP yes
19073 DATE Fri Feb 17 16:13:53 2012
19074 NSEQ 29
19075 EFFN 3.189575
19076 CKSUM 2074168776
19077 STATS LOCAL MSV -8.0345 0.71933
19078 STATS LOCAL VITERBI -7.6855 0.71933
19079 STATS LOCAL FORWARD -3.9179 0.71933
19080 HMM A C G T
19081 m->m m->i m->d i->m i->i d->m d->d
19082 COMPO 1.34160 1.26671 1.38128 1.58202
19083 1.38629 1.38629 1.38629 1.38629
19084 0.03781 3.98705 3.98705 1.46634 0.26236 0.00000 *
19085 1 3.38283 0.13637 3.43439 2.79225 1 - -
19086 1.38629 1.38629 1.38629 1.38629
19087 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19088 2 2.91688 3.54335 0.12214 3.44346 2 - -
19089 1.38629 1.38629 1.38629 1.38629
19090 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19091 3 0.14779 3.33669 2.77353 3.23426 3 - -
19092 1.38629 1.38629 1.38629 1.38629
19093 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19094 4 3.38283 0.13637 3.43439 2.79225 4 - -
19095 1.38629 1.38629 1.38629 1.38629
19096 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19097 5 3.04483 2.56726 3.09465 0.18590 5 - -
19098 1.38629 1.38629 1.38629 1.38629
19099 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19100 6 3.38283 0.13637 3.43439 2.79225 6 - -
19101 1.38629 1.38629 1.38629 1.38629
19102 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19103 7 3.04483 2.56726 3.09465 0.18590 7 - -
19104 1.38629 1.38629 1.38629 1.38629
19105 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19106 8 3.38283 0.13637 3.43439 2.79225 8 - -
19107 1.38629 1.38629 1.38629 1.38629
19108 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19109 9 2.91688 3.54335 0.12214 3.44346 9 - -
19110 1.38629 1.38629 1.38629 1.38629
19111 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19112 10 2.91688 3.54335 0.12214 3.44346 10 - -
19113 1.38629 1.38629 1.38629 1.38629
19114 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19115 11 3.38283 0.13637 3.43439 2.79225 11 - -
19116 1.38629 1.38629 1.38629 1.38629
19117 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19118 12 0.14779 3.33669 2.77353 3.23426 12 - -
19119 1.38629 1.38629 1.38629 1.38629
19120 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19121 13 0.14779 3.33669 2.77353 3.23426 13 - -
19122 1.38629 1.38629 1.38629 1.38629
19123 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19124 14 3.38283 0.13637 3.43439 2.79225 14 - -
19125 1.38629 1.38629 1.38629 1.38629
19126 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19127 15 2.91688 3.54335 0.12214 3.44346 15 - -
19128 1.38629 1.38629 1.38629 1.38629
19129 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19130 16 2.91688 3.54335 0.12214 3.44346 16 - -
19131 1.38629 1.38629 1.38629 1.38629
19132 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19133 17 0.14779 3.33669 2.77353 3.23426 17 - -
19134 1.38629 1.38629 1.38629 1.38629
19135 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19136 18 3.04483 2.56726 3.09465 0.18590 18 - -
19137 1.38629 1.38629 1.38629 1.38629
19138 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19139 19 0.14779 3.33669 2.77353 3.23426 19 - -
19140 1.38629 1.38629 1.38629 1.38629
19141 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19142 20 3.04483 2.56726 3.09465 0.18590 20 - -
19143 1.38629 1.38629 1.38629 1.38629
19144 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19145 21 3.38283 0.13637 3.43439 2.79225 21 - -
19146 1.38629 1.38629 1.38629 1.38629
19147 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19148 22 3.04483 2.56726 3.09465 0.18590 22 - -
19149 1.38629 1.38629 1.38629 1.38629
19150 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19151 23 3.38283 0.13637 3.43439 2.79225 23 - -
19152 1.38629 1.38629 1.38629 1.38629
19153 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19154 24 2.91688 3.54335 0.12214 3.44346 24 - -
19155 1.38629 1.38629 1.38629 1.38629
19156 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19157 25 2.91688 3.54335 0.12214 3.44346 25 - -
19158 1.38629 1.38629 1.38629 1.38629
19159 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19160 26 3.38283 0.13637 3.43439 2.79225 26 - -
19161 1.38629 1.38629 1.38629 1.38629
19162 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19163 27 3.04483 2.56726 3.09465 0.18590 27 - -
19164 1.38629 1.38629 1.38629 1.38629
19165 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19166 28 3.38283 0.13637 3.43439 2.79225 28 - -
19167 1.38629 1.38629 1.38629 1.38629
19168 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19169 29 0.14779 3.33669 2.77353 3.23426 29 - -
19170 1.38629 1.38629 1.38629 1.38629
19171 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19172 30 3.04483 2.56726 3.09465 0.18590 30 - -
19173 1.38629 1.38629 1.38629 1.38629
19174 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19175 31 2.91688 3.54335 0.12214 3.44346 31 - -
19176 1.38629 1.38629 1.38629 1.38629
19177 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19178 32 3.38283 0.13637 3.43439 2.79225 32 - -
19179 1.38629 1.38629 1.38629 1.38629
19180 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19181 33 0.14779 3.33669 2.77353 3.23426 33 - -
19182 1.38629 1.38629 1.38629 1.38629
19183 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19184 34 3.04483 2.56726 3.09465 0.18590 34 - -
19185 1.38629 1.38629 1.38629 1.38629
19186 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19187 35 3.38283 0.13637 3.43439 2.79225 35 - -
19188 1.38629 1.38629 1.38629 1.38629
19189 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19190 36 2.91688 3.54335 0.12214 3.44346 36 - -
19191 1.38629 1.38629 1.38629 1.38629
19192 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19193 37 0.14779 3.33669 2.77353 3.23426 37 - -
19194 1.38629 1.38629 1.38629 1.38629
19195 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19196 38 3.04483 2.56726 3.09465 0.18590 38 - -
19197 1.38629 1.38629 1.38629 1.38629
19198 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19199 39 2.91688 3.54335 0.12214 3.44346 39 - -
19200 1.38629 1.38629 1.38629 1.38629
19201 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19202 40 0.14779 3.33669 2.77353 3.23426 40 - -
19203 1.38629 1.38629 1.38629 1.38629
19204 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19205 41 0.14779 3.33669 2.77353 3.23426 41 - -
19206 1.38629 1.38629 1.38629 1.38629
19207 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19208 42 2.91688 3.54335 0.12214 3.44346 42 - -
19209 1.38629 1.38629 1.38629 1.38629
19210 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19211 43 0.14779 3.33669 2.77353 3.23426 43 - -
19212 1.38629 1.38629 1.38629 1.38629
19213 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19214 44 0.14779 3.33669 2.77353 3.23426 44 - -
19215 1.38629 1.38629 1.38629 1.38629
19216 0.03781 3.98705 3.98705 1.46634 0.26236 1.09861 0.40547
19217 45 3.38283 0.13637 3.43439 2.79225 45 - -
19218 1.38629 1.38629 1.38629 1.38629
19219 0.01909 3.96832 * 1.46634 0.26236 0.00000 *
19220 //
19221 HMMER3/b [3.0 | March 2010]
19222 NAME 2_5.8_Tracheophyta_58S_start_ninek_long
19223 LENG 45
19224 ALPH DNA
19225 RF no
19226 CS no
19227 MAP yes
19228 DATE Fri Feb 17 16:13:58 2012
19229 NSEQ 10
19230 EFFN 3.383789
19231 CKSUM 3321732590
19232 STATS LOCAL MSV -7.5222 0.71932
19233 STATS LOCAL VITERBI -7.6007 0.71932
19234 STATS LOCAL FORWARD -4.1158 0.71932
19235 HMM A C G T
19236 m->m m->i m->d i->m i->i d->m d->d
19237 COMPO 1.39575 1.33634 1.39319 1.42186
19238 1.38629 1.38629 1.38629 1.38629
19239 0.03648 4.02245 4.02245 1.46634 0.26236 0.00000 *
19240 1 3.10820 2.60760 3.15560 0.17555 1 - -
19241 1.38629 1.38629 1.38629 1.38629
19242 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19243 2 2.96099 3.60737 0.11504 3.51408 2 - -
19244 1.38629 1.38629 1.38629 1.38629
19245 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19246 3 0.13936 3.39963 2.81449 3.30313 3 - -
19247 1.38629 1.38629 1.38629 1.38629
19248 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19249 4 3.45541 0.12758 3.50392 2.84521 4 - -
19250 1.38629 1.38629 1.38629 1.38629
19251 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19252 5 3.10820 2.60760 3.15560 0.17555 5 - -
19253 1.38629 1.38629 1.38629 1.38629
19254 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19255 6 3.45541 0.12758 3.50392 2.84521 6 - -
19256 1.38629 1.38629 1.38629 1.38629
19257 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19258 7 3.10820 2.60760 3.15560 0.17555 7 - -
19259 1.38629 1.38629 1.38629 1.38629
19260 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19261 8 3.45541 0.12758 3.50392 2.84521 8 - -
19262 1.38629 1.38629 1.38629 1.38629
19263 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19264 9 2.96099 3.60737 0.11504 3.51408 9 - -
19265 1.38629 1.38629 1.38629 1.38629
19266 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19267 10 2.96099 3.60737 0.11504 3.51408 10 - -
19268 1.38629 1.38629 1.38629 1.38629
19269 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19270 11 3.45541 0.12758 3.50392 2.84521 11 - -
19271 1.38629 1.38629 1.38629 1.38629
19272 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19273 12 0.13936 3.39963 2.81449 3.30313 12 - -
19274 1.38629 1.38629 1.38629 1.38629
19275 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19276 13 0.13936 3.39963 2.81449 3.30313 13 - -
19277 1.38629 1.38629 1.38629 1.38629
19278 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19279 14 3.45541 0.12758 3.50392 2.84521 14 - -
19280 1.38629 1.38629 1.38629 1.38629
19281 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19282 15 2.96099 3.60737 0.11504 3.51408 15 - -
19283 1.38629 1.38629 1.38629 1.38629
19284 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19285 16 2.96099 3.60737 0.11504 3.51408 16 - -
19286 1.38629 1.38629 1.38629 1.38629
19287 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19288 17 0.13936 3.39963 2.81449 3.30313 17 - -
19289 1.38629 1.38629 1.38629 1.38629
19290 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19291 18 3.10820 2.60760 3.15560 0.17555 18 - -
19292 1.38629 1.38629 1.38629 1.38629
19293 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19294 19 0.13936 3.39963 2.81449 3.30313 19 - -
19295 1.38629 1.38629 1.38629 1.38629
19296 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19297 20 3.10820 2.60760 3.15560 0.17555 20 - -
19298 1.38629 1.38629 1.38629 1.38629
19299 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19300 21 3.45541 0.12758 3.50392 2.84521 21 - -
19301 1.38629 1.38629 1.38629 1.38629
19302 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19303 22 3.10820 2.60760 3.15560 0.17555 22 - -
19304 1.38629 1.38629 1.38629 1.38629
19305 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19306 23 3.45541 0.12758 3.50392 2.84521 23 - -
19307 1.38629 1.38629 1.38629 1.38629
19308 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19309 24 2.96099 3.60737 0.11504 3.51408 24 - -
19310 1.38629 1.38629 1.38629 1.38629
19311 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19312 25 2.96099 3.60737 0.11504 3.51408 25 - -
19313 1.38629 1.38629 1.38629 1.38629
19314 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19315 26 3.45541 0.12758 3.50392 2.84521 26 - -
19316 1.38629 1.38629 1.38629 1.38629
19317 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19318 27 3.10820 2.60760 3.15560 0.17555 27 - -
19319 1.38629 1.38629 1.38629 1.38629
19320 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19321 28 3.45541 0.12758 3.50392 2.84521 28 - -
19322 1.38629 1.38629 1.38629 1.38629
19323 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19324 29 3.10820 2.60760 3.15560 0.17555 29 - -
19325 1.38629 1.38629 1.38629 1.38629
19326 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19327 30 3.10820 2.60760 3.15560 0.17555 30 - -
19328 1.38629 1.38629 1.38629 1.38629
19329 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19330 31 2.96099 3.60737 0.11504 3.51408 31 - -
19331 1.38629 1.38629 1.38629 1.38629
19332 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19333 32 3.45541 0.12758 3.50392 2.84521 32 - -
19334 1.38629 1.38629 1.38629 1.38629
19335 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19336 33 0.13936 3.39963 2.81449 3.30313 33 - -
19337 1.38629 1.38629 1.38629 1.38629
19338 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19339 34 3.10820 2.60760 3.15560 0.17555 34 - -
19340 1.38629 1.38629 1.38629 1.38629
19341 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19342 35 3.45541 0.12758 3.50392 2.84521 35 - -
19343 1.38629 1.38629 1.38629 1.38629
19344 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19345 36 2.96099 3.60737 0.11504 3.51408 36 - -
19346 1.38629 1.38629 1.38629 1.38629
19347 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19348 37 0.13936 3.39963 2.81449 3.30313 37 - -
19349 1.38629 1.38629 1.38629 1.38629
19350 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19351 38 3.10820 2.60760 3.15560 0.17555 38 - -
19352 1.38629 1.38629 1.38629 1.38629
19353 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19354 39 2.96099 3.60737 0.11504 3.51408 39 - -
19355 1.38629 1.38629 1.38629 1.38629
19356 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19357 40 0.13936 3.39963 2.81449 3.30313 40 - -
19358 1.38629 1.38629 1.38629 1.38629
19359 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19360 41 0.13936 3.39963 2.81449 3.30313 41 - -
19361 1.38629 1.38629 1.38629 1.38629
19362 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19363 42 1.86508 2.96676 0.30783 2.83696 42 - -
19364 1.38629 1.38629 1.38629 1.38629
19365 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19366 43 0.13936 3.39963 2.81449 3.30313 43 - -
19367 1.38629 1.38629 1.38629 1.38629
19368 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19369 44 0.13936 3.39963 2.81449 3.30313 44 - -
19370 1.38629 1.38629 1.38629 1.38629
19371 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547
19372 45 2.76591 0.36141 2.83341 1.70606 45 - -
19373 1.38629 1.38629 1.38629 1.38629
19374 0.01840 4.00438 * 1.46634 0.26236 0.00000 *
19375 //
19376 HMMER3/b [3.0 | March 2010]
19377 NAME 2_5.8_Tracheophyta_58S_start_ninel_long
19378 LENG 45
19379 ALPH DNA
19380 RF no
19381 CS no
19382 MAP yes
19383 DATE Fri Feb 17 16:14:04 2012
19384 NSEQ 27
19385 EFFN 3.318970
19386 CKSUM 640933778
19387 STATS LOCAL MSV -7.9871 0.71932
19388 STATS LOCAL VITERBI -7.6291 0.71932
19389 STATS LOCAL FORWARD -4.2511 0.71932
19390 HMM A C G T
19391 m->m m->i m->d i->m i->i d->m d->d
19392 COMPO 1.40354 1.38599 1.39206 1.36401
19393 1.38629 1.38629 1.38629 1.38629
19394 0.03691 4.01078 4.01078 1.46634 0.26236 0.00000 *
19395 1 3.08741 2.59438 3.13561 0.17887 1 - -
19396 1.38629 1.38629 1.38629 1.38629
19397 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19398 2 2.94670 3.58655 0.11729 3.49109 2 - -
19399 1.38629 1.38629 1.38629 1.38629
19400 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19401 3 0.14205 3.37907 2.80115 3.28063 3 - -
19402 1.38629 1.38629 1.38629 1.38629
19403 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19404 4 3.43174 0.13037 3.48126 2.82800 4 - -
19405 1.38629 1.38629 1.38629 1.38629
19406 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19407 5 3.08741 2.59438 3.13561 0.17887 5 - -
19408 1.38629 1.38629 1.38629 1.38629
19409 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19410 6 3.43174 0.13037 3.48126 2.82800 6 - -
19411 1.38629 1.38629 1.38629 1.38629
19412 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19413 7 3.08741 2.59438 3.13561 0.17887 7 - -
19414 1.38629 1.38629 1.38629 1.38629
19415 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19416 8 3.43174 0.13037 3.48126 2.82800 8 - -
19417 1.38629 1.38629 1.38629 1.38629
19418 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19419 9 2.94670 3.58655 0.11729 3.49109 9 - -
19420 1.38629 1.38629 1.38629 1.38629
19421 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19422 10 2.54971 2.86852 0.27680 2.23581 10 - -
19423 1.38629 1.38629 1.38629 1.38629
19424 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19425 11 3.43174 0.13037 3.48126 2.82800 11 - -
19426 1.38629 1.38629 1.38629 1.38629
19427 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19428 12 0.14205 3.37907 2.80115 3.28063 12 - -
19429 1.38629 1.38629 1.38629 1.38629
19430 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19431 13 0.14205 3.37907 2.80115 3.28063 13 - -
19432 1.38629 1.38629 1.38629 1.38629
19433 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19434 14 3.08741 2.59438 3.13561 0.17887 14 - -
19435 1.38629 1.38629 1.38629 1.38629
19436 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19437 15 2.94670 3.58655 0.11729 3.49109 15 - -
19438 1.38629 1.38629 1.38629 1.38629
19439 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19440 16 2.94670 3.58655 0.11729 3.49109 16 - -
19441 1.38629 1.38629 1.38629 1.38629
19442 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19443 17 0.14205 3.37907 2.80115 3.28063 17 - -
19444 1.38629 1.38629 1.38629 1.38629
19445 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19446 18 3.08741 2.59438 3.13561 0.17887 18 - -
19447 1.38629 1.38629 1.38629 1.38629
19448 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19449 19 0.14205 3.37907 2.80115 3.28063 19 - -
19450 1.38629 1.38629 1.38629 1.38629
19451 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19452 20 3.08741 2.59438 3.13561 0.17887 20 - -
19453 1.38629 1.38629 1.38629 1.38629
19454 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19455 21 3.43174 0.13037 3.48126 2.82800 21 - -
19456 1.38629 1.38629 1.38629 1.38629
19457 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19458 22 3.08741 2.59438 3.13561 0.17887 22 - -
19459 1.38629 1.38629 1.38629 1.38629
19460 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19461 23 3.43174 0.13037 3.48126 2.82800 23 - -
19462 1.38629 1.38629 1.38629 1.38629
19463 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19464 24 2.94670 3.58655 0.11729 3.49109 24 - -
19465 1.38629 1.38629 1.38629 1.38629
19466 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19467 25 2.94670 3.58655 0.11729 3.49109 25 - -
19468 1.38629 1.38629 1.38629 1.38629
19469 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19470 26 3.43174 0.13037 3.48126 2.82800 26 - -
19471 1.38629 1.38629 1.38629 1.38629
19472 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19473 27 3.08741 2.59438 3.13561 0.17887 27 - -
19474 1.38629 1.38629 1.38629 1.38629
19475 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19476 28 3.43174 0.13037 3.48126 2.82800 28 - -
19477 1.38629 1.38629 1.38629 1.38629
19478 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19479 29 3.08741 2.59438 3.13561 0.17887 29 - -
19480 1.38629 1.38629 1.38629 1.38629
19481 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19482 30 3.08741 2.59438 3.13561 0.17887 30 - -
19483 1.38629 1.38629 1.38629 1.38629
19484 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19485 31 2.94670 3.58655 0.11729 3.49109 31 - -
19486 1.38629 1.38629 1.38629 1.38629
19487 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19488 32 3.43174 0.13037 3.48126 2.82800 32 - -
19489 1.38629 1.38629 1.38629 1.38629
19490 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19491 33 0.14205 3.37907 2.80115 3.28063 33 - -
19492 1.38629 1.38629 1.38629 1.38629
19493 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19494 34 3.08741 2.59438 3.13561 0.17887 34 - -
19495 1.38629 1.38629 1.38629 1.38629
19496 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19497 35 3.43174 0.13037 3.48126 2.82800 35 - -
19498 1.38629 1.38629 1.38629 1.38629
19499 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19500 36 2.94670 3.58655 0.11729 3.49109 36 - -
19501 1.38629 1.38629 1.38629 1.38629
19502 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19503 37 0.14205 3.37907 2.80115 3.28063 37 - -
19504 1.38629 1.38629 1.38629 1.38629
19505 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19506 38 3.08741 2.59438 3.13561 0.17887 38 - -
19507 1.38629 1.38629 1.38629 1.38629
19508 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19509 39 2.94670 3.58655 0.11729 3.49109 39 - -
19510 1.38629 1.38629 1.38629 1.38629
19511 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19512 40 0.14205 3.37907 2.80115 3.28063 40 - -
19513 1.38629 1.38629 1.38629 1.38629
19514 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19515 41 0.14205 3.37907 2.80115 3.28063 41 - -
19516 1.38629 1.38629 1.38629 1.38629
19517 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19518 42 2.94670 3.58655 0.11729 3.49109 42 - -
19519 1.38629 1.38629 1.38629 1.38629
19520 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19521 43 0.14205 3.37907 2.80115 3.28063 43 - -
19522 1.38629 1.38629 1.38629 1.38629
19523 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19524 44 0.14205 3.37907 2.80115 3.28063 44 - -
19525 1.38629 1.38629 1.38629 1.38629
19526 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547
19527 45 3.43174 0.13037 3.48126 2.82800 45 - -
19528 1.38629 1.38629 1.38629 1.38629
19529 0.01863 3.99249 * 1.46634 0.26236 0.00000 *
19530 //
19531 HMMER3/b [3.0 | March 2010]
19532 NAME 2_5.8_Tracheophyta_58S_start_ninem_long
19533 LENG 45
19534 ALPH DNA
19535 RF no
19536 CS no
19537 MAP yes
19538 DATE Fri Feb 17 16:14:09 2012
19539 NSEQ 8
19540 EFFN 3.207031
19541 CKSUM 388308972
19542 STATS LOCAL MSV -8.1606 0.71932
19543 STATS LOCAL VITERBI -7.7611 0.71932
19544 STATS LOCAL FORWARD -4.0593 0.71932
19545 HMM A C G T
19546 m->m m->i m->d i->m i->i d->m d->d
19547 COMPO 1.40764 1.26351 1.38278 1.50624
19548 1.38629 1.38629 1.38629 1.38629
19549 0.03769 3.99029 3.99029 1.46634 0.26236 0.00000 *
19550 1 3.38956 0.13553 3.44084 2.79718 1 - -
19551 1.38629 1.38629 1.38629 1.38629
19552 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19553 2 2.92101 3.54931 0.12145 3.45003 2 - -
19554 1.38629 1.38629 1.38629 1.38629
19555 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19556 3 0.14698 3.34251 2.77733 3.24063 3 - -
19557 1.38629 1.38629 1.38629 1.38629
19558 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19559 4 3.38956 0.13553 3.44084 2.79718 4 - -
19560 1.38629 1.38629 1.38629 1.38629
19561 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19562 5 3.05066 2.57097 3.10026 0.18492 5 - -
19563 1.38629 1.38629 1.38629 1.38629
19564 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19565 6 3.38956 0.13553 3.44084 2.79718 6 - -
19566 1.38629 1.38629 1.38629 1.38629
19567 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19568 7 3.05066 2.57097 3.10026 0.18492 7 - -
19569 1.38629 1.38629 1.38629 1.38629
19570 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19571 8 3.38956 0.13553 3.44084 2.79718 8 - -
19572 1.38629 1.38629 1.38629 1.38629
19573 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19574 9 2.92101 3.54931 0.12145 3.45003 9 - -
19575 1.38629 1.38629 1.38629 1.38629
19576 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19577 10 2.92101 3.54931 0.12145 3.45003 10 - -
19578 1.38629 1.38629 1.38629 1.38629
19579 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19580 11 3.38956 0.13553 3.44084 2.79718 11 - -
19581 1.38629 1.38629 1.38629 1.38629
19582 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19583 12 0.14698 3.34251 2.77733 3.24063 12 - -
19584 1.38629 1.38629 1.38629 1.38629
19585 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19586 13 0.14698 3.34251 2.77733 3.24063 13 - -
19587 1.38629 1.38629 1.38629 1.38629
19588 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19589 14 3.05066 2.57097 3.10026 0.18492 14 - -
19590 1.38629 1.38629 1.38629 1.38629
19591 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19592 15 2.92101 3.54931 0.12145 3.45003 15 - -
19593 1.38629 1.38629 1.38629 1.38629
19594 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19595 16 2.92101 3.54931 0.12145 3.45003 16 - -
19596 1.38629 1.38629 1.38629 1.38629
19597 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19598 17 0.14698 3.34251 2.77733 3.24063 17 - -
19599 1.38629 1.38629 1.38629 1.38629
19600 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19601 18 3.05066 2.57097 3.10026 0.18492 18 - -
19602 1.38629 1.38629 1.38629 1.38629
19603 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19604 19 0.14698 3.34251 2.77733 3.24063 19 - -
19605 1.38629 1.38629 1.38629 1.38629
19606 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19607 20 3.05066 2.57097 3.10026 0.18492 20 - -
19608 1.38629 1.38629 1.38629 1.38629
19609 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19610 21 3.38956 0.13553 3.44084 2.79718 21 - -
19611 1.38629 1.38629 1.38629 1.38629
19612 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19613 22 3.05066 2.57097 3.10026 0.18492 22 - -
19614 1.38629 1.38629 1.38629 1.38629
19615 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19616 23 3.38956 0.13553 3.44084 2.79718 23 - -
19617 1.38629 1.38629 1.38629 1.38629
19618 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19619 24 2.92101 3.54931 0.12145 3.45003 24 - -
19620 1.38629 1.38629 1.38629 1.38629
19621 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19622 25 2.92101 3.54931 0.12145 3.45003 25 - -
19623 1.38629 1.38629 1.38629 1.38629
19624 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19625 26 3.38956 0.13553 3.44084 2.79718 26 - -
19626 1.38629 1.38629 1.38629 1.38629
19627 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19628 27 3.05066 2.57097 3.10026 0.18492 27 - -
19629 1.38629 1.38629 1.38629 1.38629
19630 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19631 28 3.38956 0.13553 3.44084 2.79718 28 - -
19632 1.38629 1.38629 1.38629 1.38629
19633 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19634 29 3.05066 2.57097 3.10026 0.18492 29 - -
19635 1.38629 1.38629 1.38629 1.38629
19636 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19637 30 3.38956 0.13553 3.44084 2.79718 30 - -
19638 1.38629 1.38629 1.38629 1.38629
19639 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19640 31 2.92101 3.54931 0.12145 3.45003 31 - -
19641 1.38629 1.38629 1.38629 1.38629
19642 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19643 32 3.38956 0.13553 3.44084 2.79718 32 - -
19644 1.38629 1.38629 1.38629 1.38629
19645 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19646 33 0.14698 3.34251 2.77733 3.24063 33 - -
19647 1.38629 1.38629 1.38629 1.38629
19648 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19649 34 3.05066 2.57097 3.10026 0.18492 34 - -
19650 1.38629 1.38629 1.38629 1.38629
19651 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19652 35 3.38956 0.13553 3.44084 2.79718 35 - -
19653 1.38629 1.38629 1.38629 1.38629
19654 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19655 36 2.92101 3.54931 0.12145 3.45003 36 - -
19656 1.38629 1.38629 1.38629 1.38629
19657 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19658 37 0.14698 3.34251 2.77733 3.24063 37 - -
19659 1.38629 1.38629 1.38629 1.38629
19660 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19661 38 3.05066 2.57097 3.10026 0.18492 38 - -
19662 1.38629 1.38629 1.38629 1.38629
19663 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19664 39 2.92101 3.54931 0.12145 3.45003 39 - -
19665 1.38629 1.38629 1.38629 1.38629
19666 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19667 40 0.14698 3.34251 2.77733 3.24063 40 - -
19668 1.38629 1.38629 1.38629 1.38629
19669 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19670 41 0.14698 3.34251 2.77733 3.24063 41 - -
19671 1.38629 1.38629 1.38629 1.38629
19672 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19673 42 2.92101 3.54931 0.12145 3.45003 42 - -
19674 1.38629 1.38629 1.38629 1.38629
19675 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19676 43 0.14698 3.34251 2.77733 3.24063 43 - -
19677 1.38629 1.38629 1.38629 1.38629
19678 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19679 44 0.14698 3.34251 2.77733 3.24063 44 - -
19680 1.38629 1.38629 1.38629 1.38629
19681 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547
19682 45 3.38956 0.13553 3.44084 2.79718 45 - -
19683 1.38629 1.38629 1.38629 1.38629
19684 0.01902 3.97162 * 1.46634 0.26236 0.00000 *
19685 //
19686 HMMER3/b [3.0 | March 2010]
19687 NAME 2_5.8_Tracheophyta_58S_start_ninen_long
19688 LENG 45
19689 ALPH DNA
19690 RF no
19691 CS no
19692 MAP yes
19693 DATE Fri Feb 17 16:14:13 2012
19694 NSEQ 2
19695 EFFN 2.000000
19696 CKSUM 194503138
19697 STATS LOCAL MSV -7.4789 0.72807
19698 STATS LOCAL VITERBI -8.2229 0.72807
19699 STATS LOCAL FORWARD -3.6133 0.72807
19700 HMM A C G T
19701 m->m m->i m->d i->m i->i d->m d->d
19702 COMPO 1.39870 1.39791 1.37392 1.37493
19703 1.38629 1.38629 1.38629 1.38629
19704 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
19705 1 2.57915 2.25909 2.64442 0.28946 1 - -
19706 1.38629 1.38629 1.38629 1.38629
19707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19708 2 2.53331 3.02441 0.20344 2.88069 2 - -
19709 1.38629 1.38629 1.38629 1.38629
19710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19711 3 0.23862 2.84929 2.43386 2.70756 3 - -
19712 1.38629 1.38629 1.38629 1.38629
19713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19714 4 2.81865 0.23582 2.88868 2.35662 4 - -
19715 1.38629 1.38629 1.38629 1.38629
19716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19717 5 2.57915 2.25909 2.64442 0.28946 5 - -
19718 1.38629 1.38629 1.38629 1.38629
19719 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19720 6 2.81865 0.23582 2.88868 2.35662 6 - -
19721 1.38629 1.38629 1.38629 1.38629
19722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19723 7 2.57915 2.25909 2.64442 0.28946 7 - -
19724 1.38629 1.38629 1.38629 1.38629
19725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19726 8 2.81865 0.23582 2.88868 2.35662 8 - -
19727 1.38629 1.38629 1.38629 1.38629
19728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19729 9 2.53331 3.02441 0.20344 2.88069 9 - -
19730 1.38629 1.38629 1.38629 1.38629
19731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19732 10 2.53331 3.02441 0.20344 2.88069 10 - -
19733 1.38629 1.38629 1.38629 1.38629
19734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19735 11 2.81865 0.23582 2.88868 2.35662 11 - -
19736 1.38629 1.38629 1.38629 1.38629
19737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19738 12 0.23862 2.84929 2.43386 2.70756 12 - -
19739 1.38629 1.38629 1.38629 1.38629
19740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19741 13 0.23862 2.84929 2.43386 2.70756 13 - -
19742 1.38629 1.38629 1.38629 1.38629
19743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19744 14 2.57915 2.25909 2.64442 0.28946 14 - -
19745 1.38629 1.38629 1.38629 1.38629
19746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19747 15 2.53331 3.02441 0.20344 2.88069 15 - -
19748 1.38629 1.38629 1.38629 1.38629
19749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19750 16 2.53331 3.02441 0.20344 2.88069 16 - -
19751 1.38629 1.38629 1.38629 1.38629
19752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19753 17 0.23862 2.84929 2.43386 2.70756 17 - -
19754 1.38629 1.38629 1.38629 1.38629
19755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19756 18 2.57915 2.25909 2.64442 0.28946 18 - -
19757 1.38629 1.38629 1.38629 1.38629
19758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19759 19 0.23862 2.84929 2.43386 2.70756 19 - -
19760 1.38629 1.38629 1.38629 1.38629
19761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19762 20 2.57915 2.25909 2.64442 0.28946 20 - -
19763 1.38629 1.38629 1.38629 1.38629
19764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19765 21 2.81865 0.23582 2.88868 2.35662 21 - -
19766 1.38629 1.38629 1.38629 1.38629
19767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19768 22 2.57915 2.25909 2.64442 0.28946 22 - -
19769 1.38629 1.38629 1.38629 1.38629
19770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19771 23 2.57915 2.25909 2.64442 0.28946 23 - -
19772 1.38629 1.38629 1.38629 1.38629
19773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19774 24 2.53331 3.02441 0.20344 2.88069 24 - -
19775 1.38629 1.38629 1.38629 1.38629
19776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19777 25 2.53331 3.02441 0.20344 2.88069 25 - -
19778 1.38629 1.38629 1.38629 1.38629
19779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19780 26 2.81865 0.23582 2.88868 2.35662 26 - -
19781 1.38629 1.38629 1.38629 1.38629
19782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19783 27 2.57915 2.25909 2.64442 0.28946 27 - -
19784 1.38629 1.38629 1.38629 1.38629
19785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19786 28 2.81865 0.23582 2.88868 2.35662 28 - -
19787 1.38629 1.38629 1.38629 1.38629
19788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19789 29 2.57915 2.25909 2.64442 0.28946 29 - -
19790 1.38629 1.38629 1.38629 1.38629
19791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19792 30 2.81865 0.23582 2.88868 2.35662 30 - -
19793 1.38629 1.38629 1.38629 1.38629
19794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19795 31 2.53331 3.02441 0.20344 2.88069 31 - -
19796 1.38629 1.38629 1.38629 1.38629
19797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19798 32 2.81865 0.23582 2.88868 2.35662 32 - -
19799 1.38629 1.38629 1.38629 1.38629
19800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19801 33 0.23862 2.84929 2.43386 2.70756 33 - -
19802 1.38629 1.38629 1.38629 1.38629
19803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19804 34 2.57915 2.25909 2.64442 0.28946 34 - -
19805 1.38629 1.38629 1.38629 1.38629
19806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19807 35 2.81865 0.23582 2.88868 2.35662 35 - -
19808 1.38629 1.38629 1.38629 1.38629
19809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19810 36 2.53331 3.02441 0.20344 2.88069 36 - -
19811 1.38629 1.38629 1.38629 1.38629
19812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19813 37 0.23862 2.84929 2.43386 2.70756 37 - -
19814 1.38629 1.38629 1.38629 1.38629
19815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19816 38 2.57915 2.25909 2.64442 0.28946 38 - -
19817 1.38629 1.38629 1.38629 1.38629
19818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19819 39 2.53331 3.02441 0.20344 2.88069 39 - -
19820 1.38629 1.38629 1.38629 1.38629
19821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19822 40 0.23862 2.84929 2.43386 2.70756 40 - -
19823 1.38629 1.38629 1.38629 1.38629
19824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19825 41 0.23862 2.84929 2.43386 2.70756 41 - -
19826 1.38629 1.38629 1.38629 1.38629
19827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19828 42 2.53331 3.02441 0.20344 2.88069 42 - -
19829 1.38629 1.38629 1.38629 1.38629
19830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19831 43 0.23862 2.84929 2.43386 2.70756 43 - -
19832 1.38629 1.38629 1.38629 1.38629
19833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19834 44 0.23862 2.84929 2.43386 2.70756 44 - -
19835 1.38629 1.38629 1.38629 1.38629
19836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
19837 45 2.81865 0.23582 2.88868 2.35662 45 - -
19838 1.38629 1.38629 1.38629 1.38629
19839 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
19840 //
19841 HMMER3/b [3.0 | March 2010]
19842 NAME 2_5.8_Tracheophyta_58S_start_nineo_long
19843 LENG 45
19844 ALPH DNA
19845 RF no
19846 CS no
19847 MAP yes
19848 DATE Fri Feb 17 16:14:18 2012
19849 NSEQ 3
19850 EFFN 3.000000
19851 CKSUM 3592650123
19852 STATS LOCAL MSV -7.9344 0.72076
19853 STATS LOCAL VITERBI -7.6721 0.72076
19854 STATS LOCAL FORWARD -3.7518 0.72076
19855 HMM A C G T
19856 m->m m->i m->d i->m i->i d->m d->d
19857 COMPO 1.26182 1.31519 1.42658 1.56874
19858 1.38629 1.38629 1.38629 1.38629
19859 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
19860 1 1.21118 1.33798 1.26855 1.84174 1 - -
19861 1.38629 1.38629 1.38629 1.38629
19862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19863 2 2.86982 3.47591 0.13017 3.36931 2 - -
19864 1.38629 1.38629 1.38629 1.38629
19865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19866 3 0.15719 3.27118 2.73043 3.16274 3 - -
19867 1.38629 1.38629 1.38629 1.38629
19868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19869 4 3.30705 0.14631 3.36166 2.73626 4 - -
19870 1.38629 1.38629 1.38629 1.38629
19871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19872 5 2.97980 2.52563 3.03204 0.19727 5 - -
19873 1.38629 1.38629 1.38629 1.38629
19874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19875 6 3.30705 0.14631 3.36166 2.73626 6 - -
19876 1.38629 1.38629 1.38629 1.38629
19877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19878 7 2.97980 2.52563 3.03204 0.19727 7 - -
19879 1.38629 1.38629 1.38629 1.38629
19880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19881 8 3.30705 0.14631 3.36166 2.73626 8 - -
19882 1.38629 1.38629 1.38629 1.38629
19883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19884 9 2.86982 3.47591 0.13017 3.36931 9 - -
19885 1.38629 1.38629 1.38629 1.38629
19886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19887 10 0.15719 3.27118 2.73043 3.16274 10 - -
19888 1.38629 1.38629 1.38629 1.38629
19889 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19890 11 3.30705 0.14631 3.36166 2.73626 11 - -
19891 1.38629 1.38629 1.38629 1.38629
19892 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19893 12 0.15719 3.27118 2.73043 3.16274 12 - -
19894 1.38629 1.38629 1.38629 1.38629
19895 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19896 13 0.15719 3.27118 2.73043 3.16274 13 - -
19897 1.38629 1.38629 1.38629 1.38629
19898 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19899 14 3.30705 0.14631 3.36166 2.73626 14 - -
19900 1.38629 1.38629 1.38629 1.38629
19901 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19902 15 2.86982 3.47591 0.13017 3.36931 15 - -
19903 1.38629 1.38629 1.38629 1.38629
19904 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19905 16 2.86982 3.47591 0.13017 3.36931 16 - -
19906 1.38629 1.38629 1.38629 1.38629
19907 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19908 17 0.15719 3.27118 2.73043 3.16274 17 - -
19909 1.38629 1.38629 1.38629 1.38629
19910 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19911 18 2.97980 2.52563 3.03204 0.19727 18 - -
19912 1.38629 1.38629 1.38629 1.38629
19913 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19914 19 0.15719 3.27118 2.73043 3.16274 19 - -
19915 1.38629 1.38629 1.38629 1.38629
19916 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19917 20 2.97980 2.52563 3.03204 0.19727 20 - -
19918 1.38629 1.38629 1.38629 1.38629
19919 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19920 21 3.30705 0.14631 3.36166 2.73626 21 - -
19921 1.38629 1.38629 1.38629 1.38629
19922 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19923 22 2.97980 2.52563 3.03204 0.19727 22 - -
19924 1.38629 1.38629 1.38629 1.38629
19925 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19926 23 3.30705 0.14631 3.36166 2.73626 23 - -
19927 1.38629 1.38629 1.38629 1.38629
19928 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19929 24 2.86982 3.47591 0.13017 3.36931 24 - -
19930 1.38629 1.38629 1.38629 1.38629
19931 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19932 25 2.86982 3.47591 0.13017 3.36931 25 - -
19933 1.38629 1.38629 1.38629 1.38629
19934 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19935 26 3.30705 0.14631 3.36166 2.73626 26 - -
19936 1.38629 1.38629 1.38629 1.38629
19937 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19938 27 2.97980 2.52563 3.03204 0.19727 27 - -
19939 1.38629 1.38629 1.38629 1.38629
19940 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19941 28 3.30705 0.14631 3.36166 2.73626 28 - -
19942 1.38629 1.38629 1.38629 1.38629
19943 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19944 29 0.15719 3.27118 2.73043 3.16274 29 - -
19945 1.38629 1.38629 1.38629 1.38629
19946 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19947 30 2.97980 2.52563 3.03204 0.19727 30 - -
19948 1.38629 1.38629 1.38629 1.38629
19949 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19950 31 2.86982 3.47591 0.13017 3.36931 31 - -
19951 1.38629 1.38629 1.38629 1.38629
19952 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19953 32 3.30705 0.14631 3.36166 2.73626 32 - -
19954 1.38629 1.38629 1.38629 1.38629
19955 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19956 33 0.15719 3.27118 2.73043 3.16274 33 - -
19957 1.38629 1.38629 1.38629 1.38629
19958 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19959 34 2.97980 2.52563 3.03204 0.19727 34 - -
19960 1.38629 1.38629 1.38629 1.38629
19961 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19962 35 3.30705 0.14631 3.36166 2.73626 35 - -
19963 1.38629 1.38629 1.38629 1.38629
19964 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19965 36 2.86982 3.47591 0.13017 3.36931 36 - -
19966 1.38629 1.38629 1.38629 1.38629
19967 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19968 37 0.15719 3.27118 2.73043 3.16274 37 - -
19969 1.38629 1.38629 1.38629 1.38629
19970 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19971 38 2.97980 2.52563 3.03204 0.19727 38 - -
19972 1.38629 1.38629 1.38629 1.38629
19973 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19974 39 2.86982 3.47591 0.13017 3.36931 39 - -
19975 1.38629 1.38629 1.38629 1.38629
19976 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19977 40 0.15719 3.27118 2.73043 3.16274 40 - -
19978 1.38629 1.38629 1.38629 1.38629
19979 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19980 41 0.15719 3.27118 2.73043 3.16274 41 - -
19981 1.38629 1.38629 1.38629 1.38629
19982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19983 42 2.86982 3.47591 0.13017 3.36931 42 - -
19984 1.38629 1.38629 1.38629 1.38629
19985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19986 43 0.15719 3.27118 2.73043 3.16274 43 - -
19987 1.38629 1.38629 1.38629 1.38629
19988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19989 44 0.15719 3.27118 2.73043 3.16274 44 - -
19990 1.38629 1.38629 1.38629 1.38629
19991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
19992 45 3.30705 0.14631 3.36166 2.73626 45 - -
19993 1.38629 1.38629 1.38629 1.38629
19994 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
19995 //
19996 HMMER3/b [3.0 | March 2010]
19997 NAME 2_5.8_Tracheophyta_58S_start_ninep_long
19998 LENG 45
19999 ALPH DNA
20000 RF no
20001 CS no
20002 MAP yes
20003 DATE Fri Feb 17 16:14:24 2012
20004 NSEQ 12
20005 EFFN 3.190430
20006 CKSUM 2049545075
20007 STATS LOCAL MSV -8.0345 0.71932
20008 STATS LOCAL VITERBI -7.6858 0.71932
20009 STATS LOCAL FORWARD -3.9181 0.71932
20010 HMM A C G T
20011 m->m m->i m->d i->m i->i d->m d->d
20012 COMPO 1.34160 1.26670 1.38129 1.58203
20013 1.38629 1.38629 1.38629 1.38629
20014 0.03781 3.98721 3.98721 1.46634 0.26236 0.00000 *
20015 1 3.38316 0.13633 3.43471 2.79249 1 - -
20016 1.38629 1.38629 1.38629 1.38629
20017 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20018 2 2.91709 3.54364 0.12210 3.44379 2 - -
20019 1.38629 1.38629 1.38629 1.38629
20020 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20021 3 0.14775 3.33697 2.77371 3.23457 3 - -
20022 1.38629 1.38629 1.38629 1.38629
20023 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20024 4 3.38316 0.13633 3.43471 2.79249 4 - -
20025 1.38629 1.38629 1.38629 1.38629
20026 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20027 5 3.04512 2.56744 3.09493 0.18585 5 - -
20028 1.38629 1.38629 1.38629 1.38629
20029 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20030 6 3.38316 0.13633 3.43471 2.79249 6 - -
20031 1.38629 1.38629 1.38629 1.38629
20032 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20033 7 3.04512 2.56744 3.09493 0.18585 7 - -
20034 1.38629 1.38629 1.38629 1.38629
20035 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20036 8 3.38316 0.13633 3.43471 2.79249 8 - -
20037 1.38629 1.38629 1.38629 1.38629
20038 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20039 9 2.91709 3.54364 0.12210 3.44379 9 - -
20040 1.38629 1.38629 1.38629 1.38629
20041 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20042 10 2.91709 3.54364 0.12210 3.44379 10 - -
20043 1.38629 1.38629 1.38629 1.38629
20044 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20045 11 3.38316 0.13633 3.43471 2.79249 11 - -
20046 1.38629 1.38629 1.38629 1.38629
20047 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20048 12 0.14775 3.33697 2.77371 3.23457 12 - -
20049 1.38629 1.38629 1.38629 1.38629
20050 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20051 13 0.14775 3.33697 2.77371 3.23457 13 - -
20052 1.38629 1.38629 1.38629 1.38629
20053 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20054 14 3.38316 0.13633 3.43471 2.79249 14 - -
20055 1.38629 1.38629 1.38629 1.38629
20056 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20057 15 2.91709 3.54364 0.12210 3.44379 15 - -
20058 1.38629 1.38629 1.38629 1.38629
20059 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20060 16 2.91709 3.54364 0.12210 3.44379 16 - -
20061 1.38629 1.38629 1.38629 1.38629
20062 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20063 17 0.14775 3.33697 2.77371 3.23457 17 - -
20064 1.38629 1.38629 1.38629 1.38629
20065 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20066 18 3.04512 2.56744 3.09493 0.18585 18 - -
20067 1.38629 1.38629 1.38629 1.38629
20068 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20069 19 0.14775 3.33697 2.77371 3.23457 19 - -
20070 1.38629 1.38629 1.38629 1.38629
20071 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20072 20 3.04512 2.56744 3.09493 0.18585 20 - -
20073 1.38629 1.38629 1.38629 1.38629
20074 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20075 21 3.38316 0.13633 3.43471 2.79249 21 - -
20076 1.38629 1.38629 1.38629 1.38629
20077 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20078 22 3.04512 2.56744 3.09493 0.18585 22 - -
20079 1.38629 1.38629 1.38629 1.38629
20080 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20081 23 3.38316 0.13633 3.43471 2.79249 23 - -
20082 1.38629 1.38629 1.38629 1.38629
20083 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20084 24 2.91709 3.54364 0.12210 3.44379 24 - -
20085 1.38629 1.38629 1.38629 1.38629
20086 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20087 25 2.91709 3.54364 0.12210 3.44379 25 - -
20088 1.38629 1.38629 1.38629 1.38629
20089 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20090 26 3.38316 0.13633 3.43471 2.79249 26 - -
20091 1.38629 1.38629 1.38629 1.38629
20092 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20093 27 3.04512 2.56744 3.09493 0.18585 27 - -
20094 1.38629 1.38629 1.38629 1.38629
20095 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20096 28 3.38316 0.13633 3.43471 2.79249 28 - -
20097 1.38629 1.38629 1.38629 1.38629
20098 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20099 29 0.14775 3.33697 2.77371 3.23457 29 - -
20100 1.38629 1.38629 1.38629 1.38629
20101 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20102 30 3.04512 2.56744 3.09493 0.18585 30 - -
20103 1.38629 1.38629 1.38629 1.38629
20104 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20105 31 2.91709 3.54364 0.12210 3.44379 31 - -
20106 1.38629 1.38629 1.38629 1.38629
20107 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20108 32 3.38316 0.13633 3.43471 2.79249 32 - -
20109 1.38629 1.38629 1.38629 1.38629
20110 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20111 33 0.14775 3.33697 2.77371 3.23457 33 - -
20112 1.38629 1.38629 1.38629 1.38629
20113 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20114 34 3.04512 2.56744 3.09493 0.18585 34 - -
20115 1.38629 1.38629 1.38629 1.38629
20116 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20117 35 3.38316 0.13633 3.43471 2.79249 35 - -
20118 1.38629 1.38629 1.38629 1.38629
20119 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20120 36 2.91709 3.54364 0.12210 3.44379 36 - -
20121 1.38629 1.38629 1.38629 1.38629
20122 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20123 37 0.14775 3.33697 2.77371 3.23457 37 - -
20124 1.38629 1.38629 1.38629 1.38629
20125 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20126 38 3.04512 2.56744 3.09493 0.18585 38 - -
20127 1.38629 1.38629 1.38629 1.38629
20128 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20129 39 2.91709 3.54364 0.12210 3.44379 39 - -
20130 1.38629 1.38629 1.38629 1.38629
20131 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20132 40 0.14775 3.33697 2.77371 3.23457 40 - -
20133 1.38629 1.38629 1.38629 1.38629
20134 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20135 41 0.14775 3.33697 2.77371 3.23457 41 - -
20136 1.38629 1.38629 1.38629 1.38629
20137 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20138 42 2.91709 3.54364 0.12210 3.44379 42 - -
20139 1.38629 1.38629 1.38629 1.38629
20140 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20141 43 0.14775 3.33697 2.77371 3.23457 43 - -
20142 1.38629 1.38629 1.38629 1.38629
20143 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20144 44 0.14775 3.33697 2.77371 3.23457 44 - -
20145 1.38629 1.38629 1.38629 1.38629
20146 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547
20147 45 3.38316 0.13633 3.43471 2.79249 45 - -
20148 1.38629 1.38629 1.38629 1.38629
20149 0.01908 3.96848 * 1.46634 0.26236 0.00000 *
20150 //
20151 HMMER3/b [3.0 | March 2010]
20152 NAME 2_5.8_Tracheophyta_58S_start_nineq_long
20153 LENG 45
20154 ALPH DNA
20155 RF no
20156 CS no
20157 MAP yes
20158 DATE Fri Feb 17 16:14:31 2012
20159 NSEQ 15
20160 EFFN 3.336182
20161 CKSUM 3271186430
20162 STATS LOCAL MSV -8.0468 0.71932
20163 STATS LOCAL VITERBI -7.6643 0.71932
20164 STATS LOCAL FORWARD -4.0052 0.71932
20165 HMM A C G T
20166 m->m m->i m->d i->m i->i d->m d->d
20167 COMPO 1.33355 1.35898 1.37681 1.48212
20168 1.38629 1.38629 1.38629 1.38629
20169 0.03679 4.01389 4.01389 1.46634 0.26236 0.00000 *
20170 1 0.14133 3.38458 2.80473 3.28665 1 - -
20171 1.38629 1.38629 1.38629 1.38629
20172 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20173 2 2.95053 3.59213 0.11668 3.49725 2 - -
20174 1.38629 1.38629 1.38629 1.38629
20175 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20176 3 0.14133 3.38458 2.80473 3.28665 3 - -
20177 1.38629 1.38629 1.38629 1.38629
20178 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20179 4 3.43808 0.12962 3.48733 2.83261 4 - -
20180 1.38629 1.38629 1.38629 1.38629
20181 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20182 5 3.09296 2.59791 3.14095 0.17798 5 - -
20183 1.38629 1.38629 1.38629 1.38629
20184 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20185 6 3.43808 0.12962 3.48733 2.83261 6 - -
20186 1.38629 1.38629 1.38629 1.38629
20187 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20188 7 3.09296 2.59791 3.14095 0.17798 7 - -
20189 1.38629 1.38629 1.38629 1.38629
20190 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20191 8 3.43808 0.12962 3.48733 2.83261 8 - -
20192 1.38629 1.38629 1.38629 1.38629
20193 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20194 9 2.95053 3.59213 0.11668 3.49725 9 - -
20195 1.38629 1.38629 1.38629 1.38629
20196 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20197 10 2.95053 3.59213 0.11668 3.49725 10 - -
20198 1.38629 1.38629 1.38629 1.38629
20199 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20200 11 3.43808 0.12962 3.48733 2.83261 11 - -
20201 1.38629 1.38629 1.38629 1.38629
20202 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20203 12 0.14133 3.38458 2.80473 3.28665 12 - -
20204 1.38629 1.38629 1.38629 1.38629
20205 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20206 13 0.14133 3.38458 2.80473 3.28665 13 - -
20207 1.38629 1.38629 1.38629 1.38629
20208 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20209 14 3.43808 0.12962 3.48733 2.83261 14 - -
20210 1.38629 1.38629 1.38629 1.38629
20211 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20212 15 2.95053 3.59213 0.11668 3.49725 15 - -
20213 1.38629 1.38629 1.38629 1.38629
20214 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20215 16 2.95053 3.59213 0.11668 3.49725 16 - -
20216 1.38629 1.38629 1.38629 1.38629
20217 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20218 17 0.14133 3.38458 2.80473 3.28665 17 - -
20219 1.38629 1.38629 1.38629 1.38629
20220 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20221 18 3.09296 2.59791 3.14095 0.17798 18 - -
20222 1.38629 1.38629 1.38629 1.38629
20223 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20224 19 0.14133 3.38458 2.80473 3.28665 19 - -
20225 1.38629 1.38629 1.38629 1.38629
20226 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20227 20 3.09296 2.59791 3.14095 0.17798 20 - -
20228 1.38629 1.38629 1.38629 1.38629
20229 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20230 21 3.43808 0.12962 3.48733 2.83261 21 - -
20231 1.38629 1.38629 1.38629 1.38629
20232 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20233 22 3.09296 2.59791 3.14095 0.17798 22 - -
20234 1.38629 1.38629 1.38629 1.38629
20235 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20236 23 3.09296 2.59791 3.14095 0.17798 23 - -
20237 1.38629 1.38629 1.38629 1.38629
20238 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20239 24 2.95053 3.59213 0.11668 3.49725 24 - -
20240 1.38629 1.38629 1.38629 1.38629
20241 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20242 25 2.95053 3.59213 0.11668 3.49725 25 - -
20243 1.38629 1.38629 1.38629 1.38629
20244 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20245 26 3.43808 0.12962 3.48733 2.83261 26 - -
20246 1.38629 1.38629 1.38629 1.38629
20247 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20248 27 3.09296 2.59791 3.14095 0.17798 27 - -
20249 1.38629 1.38629 1.38629 1.38629
20250 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20251 28 3.43808 0.12962 3.48733 2.83261 28 - -
20252 1.38629 1.38629 1.38629 1.38629
20253 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20254 29 3.09296 2.59791 3.14095 0.17798 29 - -
20255 1.38629 1.38629 1.38629 1.38629
20256 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20257 30 2.43538 0.73697 2.50788 1.04289 30 - -
20258 1.38629 1.38629 1.38629 1.38629
20259 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20260 31 2.95053 3.59213 0.11668 3.49725 31 - -
20261 1.38629 1.38629 1.38629 1.38629
20262 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20263 32 3.43808 0.12962 3.48733 2.83261 32 - -
20264 1.38629 1.38629 1.38629 1.38629
20265 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20266 33 0.14133 3.38458 2.80473 3.28665 33 - -
20267 1.38629 1.38629 1.38629 1.38629
20268 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20269 34 3.09296 2.59791 3.14095 0.17798 34 - -
20270 1.38629 1.38629 1.38629 1.38629
20271 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20272 35 3.43808 0.12962 3.48733 2.83261 35 - -
20273 1.38629 1.38629 1.38629 1.38629
20274 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20275 36 2.95053 3.59213 0.11668 3.49725 36 - -
20276 1.38629 1.38629 1.38629 1.38629
20277 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20278 37 0.14133 3.38458 2.80473 3.28665 37 - -
20279 1.38629 1.38629 1.38629 1.38629
20280 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20281 38 3.09296 2.59791 3.14095 0.17798 38 - -
20282 1.38629 1.38629 1.38629 1.38629
20283 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20284 39 2.95053 3.59213 0.11668 3.49725 39 - -
20285 1.38629 1.38629 1.38629 1.38629
20286 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20287 40 0.14133 3.38458 2.80473 3.28665 40 - -
20288 1.38629 1.38629 1.38629 1.38629
20289 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20290 41 0.14133 3.38458 2.80473 3.28665 41 - -
20291 1.38629 1.38629 1.38629 1.38629
20292 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20293 42 2.95053 3.59213 0.11668 3.49725 42 - -
20294 1.38629 1.38629 1.38629 1.38629
20295 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20296 43 0.14133 3.38458 2.80473 3.28665 43 - -
20297 1.38629 1.38629 1.38629 1.38629
20298 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20299 44 0.14133 3.38458 2.80473 3.28665 44 - -
20300 1.38629 1.38629 1.38629 1.38629
20301 0.03679 4.01389 4.01389 1.46634 0.26236 1.09861 0.40547
20302 45 3.43808 0.12962 3.48733 2.83261 45 - -
20303 1.38629 1.38629 1.38629 1.38629
20304 0.01857 3.99566 * 1.46634 0.26236 0.00000 *
20305 //
20306 HMMER3/b [3.0 | March 2010]
20307 NAME 2_5.8_Tracheophyta_58S_start_niner_long
20308 LENG 45
20309 ALPH DNA
20310 RF no
20311 CS no
20312 MAP yes
20313 DATE Fri Feb 17 16:14:40 2012
20314 NSEQ 1631
20315 EFFN 3.673956
20316 CKSUM 3384115276
20317 STATS LOCAL MSV -7.6208 0.71933
20318 STATS LOCAL VITERBI -7.6410 0.71933
20319 STATS LOCAL FORWARD -3.9735 0.71933
20320 HMM A C G T
20321 m->m m->i m->d i->m i->i d->m d->d
20322 COMPO 1.38082 1.26665 1.37302 1.54405
20323 1.38629 1.38629 1.38629 1.38629
20324 0.03464 4.07312 4.07312 1.46634 0.26236 0.00000 *
20325 1 2.37824 0.62590 2.43334 1.25609 1 - -
20326 1.38629 1.38629 1.38629 1.38629
20327 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20328 2 2.77685 3.58728 0.12807 3.49652 2 - -
20329 1.38629 1.38629 1.38629 1.38629
20330 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20331 3 0.12864 3.48642 2.87047 3.39832 3 - -
20332 1.38629 1.38629 1.38629 1.38629
20333 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20334 4 3.55496 0.11657 3.59909 2.91689 4 - -
20335 1.38629 1.38629 1.38629 1.38629
20336 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20337 5 3.19708 2.66398 3.24103 0.16214 5 - -
20338 1.38629 1.38629 1.38629 1.38629
20339 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20340 6 3.55496 0.11657 3.59909 2.91689 6 - -
20341 1.38629 1.38629 1.38629 1.38629
20342 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20343 7 3.10118 2.42316 3.14895 0.19423 7 - -
20344 1.38629 1.38629 1.38629 1.38629
20345 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20346 8 3.45468 0.13230 3.42439 2.81744 8 - -
20347 1.38629 1.38629 1.38629 1.38629
20348 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20349 9 3.02021 3.69433 0.10614 3.61032 9 - -
20350 1.38629 1.38629 1.38629 1.38629
20351 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20352 10 2.92544 3.65523 0.11393 3.56912 10 - -
20353 1.38629 1.38629 1.38629 1.38629
20354 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20355 11 3.45801 0.12993 3.39292 2.86926 11 - -
20356 1.38629 1.38629 1.38629 1.38629
20357 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20358 12 0.13702 3.45284 2.78437 3.36310 12 - -
20359 1.38629 1.38629 1.38629 1.38629
20360 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20361 13 0.12864 3.48642 2.87047 3.39832 13 - -
20362 1.38629 1.38629 1.38629 1.38629
20363 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20364 14 3.50366 0.12675 3.54954 2.80967 14 - -
20365 1.38629 1.38629 1.38629 1.38629
20366 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20367 15 3.02021 3.69433 0.10614 3.61032 15 - -
20368 1.38629 1.38629 1.38629 1.38629
20369 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20370 16 3.02021 3.69433 0.10614 3.61032 16 - -
20371 1.38629 1.38629 1.38629 1.38629
20372 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20373 17 0.12864 3.48642 2.87047 3.39832 17 - -
20374 1.38629 1.38629 1.38629 1.38629
20375 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20376 18 3.19708 2.66398 3.24103 0.16214 18 - -
20377 1.38629 1.38629 1.38629 1.38629
20378 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20379 19 0.12864 3.48642 2.87047 3.39832 19 - -
20380 1.38629 1.38629 1.38629 1.38629
20381 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20382 20 3.19708 2.66398 3.24103 0.16214 20 - -
20383 1.38629 1.38629 1.38629 1.38629
20384 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20385 21 3.55496 0.11657 3.59909 2.91689 21 - -
20386 1.38629 1.38629 1.38629 1.38629
20387 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20388 22 3.19708 2.66398 3.24103 0.16214 22 - -
20389 1.38629 1.38629 1.38629 1.38629
20390 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20391 23 3.23252 0.16301 3.36338 2.57256 23 - -
20392 1.38629 1.38629 1.38629 1.38629
20393 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20394 24 2.98023 3.47991 0.11807 3.51415 24 - -
20395 1.38629 1.38629 1.38629 1.38629
20396 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20397 25 3.02021 3.69433 0.10614 3.61032 25 - -
20398 1.38629 1.38629 1.38629 1.38629
20399 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20400 26 3.50767 0.12594 3.55341 2.81776 26 - -
20401 1.38629 1.38629 1.38629 1.38629
20402 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20403 27 3.19708 2.66398 3.24103 0.16214 27 - -
20404 1.38629 1.38629 1.38629 1.38629
20405 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20406 28 3.55496 0.11657 3.59909 2.91689 28 - -
20407 1.38629 1.38629 1.38629 1.38629
20408 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20409 29 1.49008 2.22189 2.28320 0.57220 29 - -
20410 1.38629 1.38629 1.38629 1.38629
20411 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20412 30 2.48276 1.06693 2.55323 0.70402 30 - -
20413 1.38629 1.38629 1.38629 1.38629
20414 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20415 31 2.92531 3.65518 0.11394 3.56906 31 - -
20416 1.38629 1.38629 1.38629 1.38629
20417 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20418 32 3.55496 0.11657 3.59909 2.91689 32 - -
20419 1.38629 1.38629 1.38629 1.38629
20420 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20421 33 0.12864 3.48642 2.87047 3.39832 33 - -
20422 1.38629 1.38629 1.38629 1.38629
20423 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20424 34 3.19708 2.66398 3.24103 0.16214 34 - -
20425 1.38629 1.38629 1.38629 1.38629
20426 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20427 35 3.55496 0.11657 3.59909 2.91689 35 - -
20428 1.38629 1.38629 1.38629 1.38629
20429 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20430 36 3.02021 3.69433 0.10614 3.61032 36 - -
20431 1.38629 1.38629 1.38629 1.38629
20432 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20433 37 0.12864 3.48642 2.87047 3.39832 37 - -
20434 1.38629 1.38629 1.38629 1.38629
20435 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20436 38 3.19708 2.66398 3.24103 0.16214 38 - -
20437 1.38629 1.38629 1.38629 1.38629
20438 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20439 39 3.02021 3.69433 0.10614 3.61032 39 - -
20440 1.38629 1.38629 1.38629 1.38629
20441 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20442 40 0.12864 3.48642 2.87047 3.39832 40 - -
20443 1.38629 1.38629 1.38629 1.38629
20444 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20445 41 0.12864 3.48642 2.87047 3.39832 41 - -
20446 1.38629 1.38629 1.38629 1.38629
20447 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20448 42 3.02021 3.69433 0.10614 3.61032 42 - -
20449 1.38629 1.38629 1.38629 1.38629
20450 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20451 43 0.12864 3.48642 2.87047 3.39832 43 - -
20452 1.38629 1.38629 1.38629 1.38629
20453 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20454 44 0.12864 3.48642 2.87047 3.39832 44 - -
20455 1.38629 1.38629 1.38629 1.38629
20456 0.03464 4.07312 4.07312 1.46634 0.26236 1.09861 0.40547
20457 45 3.55496 0.11657 3.59909 2.91689 45 - -
20458 1.38629 1.38629 1.38629 1.38629
20459 0.01747 4.05595 * 1.46634 0.26236 0.00000 *
20460 //
20461 HMMER3/b [3.0 | March 2010]
20462 NAME 2_5.8_Tracheophyta_58S_start_onea_long
20463 LENG 45
20464 ALPH DNA
20465 RF no
20466 CS no
20467 MAP yes
20468 DATE Fri Feb 17 15:54:43 2012
20469 NSEQ 8
20470 EFFN 3.597656
20471 CKSUM 3069228844
20472 STATS LOCAL MSV -7.7371 0.71932
20473 STATS LOCAL VITERBI -7.6193 0.71932
20474 STATS LOCAL FORWARD -4.1725 0.71932
20475 HMM A C G T
20476 m->m m->i m->d i->m i->i d->m d->d
20477 COMPO 1.32040 1.29960 1.63507 1.32655
20478 1.38629 1.38629 1.38629 1.38629
20479 0.03511 4.06004 4.06004 1.46634 0.26236 0.00000 *
20480 1 3.17435 2.64957 3.21919 0.16545 1 - -
20481 1.38629 1.38629 1.38629 1.38629
20482 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20483 2 2.16721 0.30824 2.78013 2.42212 2 - -
20484 1.38629 1.38629 1.38629 1.38629
20485 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20486 3 0.13127 3.46439 2.85631 3.37414 3 - -
20487 1.38629 1.38629 1.38629 1.38629
20488 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20489 4 3.52976 0.11925 3.57502 2.89885 4 - -
20490 1.38629 1.38629 1.38629 1.38629
20491 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20492 5 3.17435 2.64957 3.21919 0.16545 5 - -
20493 1.38629 1.38629 1.38629 1.38629
20494 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20495 6 3.17435 2.64957 3.21919 0.16545 6 - -
20496 1.38629 1.38629 1.38629 1.38629
20497 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20498 7 3.17435 2.64957 3.21919 0.16545 7 - -
20499 1.38629 1.38629 1.38629 1.38629
20500 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20501 8 3.52976 0.11925 3.57502 2.89885 8 - -
20502 1.38629 1.38629 1.38629 1.38629
20503 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20504 9 0.13127 3.46439 2.85631 3.37414 9 - -
20505 1.38629 1.38629 1.38629 1.38629
20506 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20507 10 0.13127 3.46439 2.85631 3.37414 10 - -
20508 1.38629 1.38629 1.38629 1.38629
20509 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20510 11 3.52976 0.11925 3.57502 2.89885 11 - -
20511 1.38629 1.38629 1.38629 1.38629
20512 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20513 12 0.13127 3.46439 2.85631 3.37414 12 - -
20514 1.38629 1.38629 1.38629 1.38629
20515 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20516 13 0.13127 3.46439 2.85631 3.37414 13 - -
20517 1.38629 1.38629 1.38629 1.38629
20518 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20519 14 2.45394 0.94651 2.52541 0.80760 14 - -
20520 1.38629 1.38629 1.38629 1.38629
20521 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20522 15 3.00534 3.67241 0.10830 3.58603 15 - -
20523 1.38629 1.38629 1.38629 1.38629
20524 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20525 16 3.00534 3.67241 0.10830 3.58603 16 - -
20526 1.38629 1.38629 1.38629 1.38629
20527 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20528 17 0.13127 3.46439 2.85631 3.37414 17 - -
20529 1.38629 1.38629 1.38629 1.38629
20530 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20531 18 3.17435 2.64957 3.21919 0.16545 18 - -
20532 1.38629 1.38629 1.38629 1.38629
20533 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20534 19 3.52976 0.11925 3.57502 2.89885 19 - -
20535 1.38629 1.38629 1.38629 1.38629
20536 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20537 20 3.17435 2.64957 3.21919 0.16545 20 - -
20538 1.38629 1.38629 1.38629 1.38629
20539 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20540 21 3.52976 0.11925 3.57502 2.89885 21 - -
20541 1.38629 1.38629 1.38629 1.38629
20542 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20543 22 3.17435 2.64957 3.21919 0.16545 22 - -
20544 1.38629 1.38629 1.38629 1.38629
20545 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20546 23 3.17435 2.64957 3.21919 0.16545 23 - -
20547 1.38629 1.38629 1.38629 1.38629
20548 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20549 24 3.00534 3.67241 0.10830 3.58603 24 - -
20550 1.38629 1.38629 1.38629 1.38629
20551 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20552 25 3.00534 3.67241 0.10830 3.58603 25 - -
20553 1.38629 1.38629 1.38629 1.38629
20554 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20555 26 3.52976 0.11925 3.57502 2.89885 26 - -
20556 1.38629 1.38629 1.38629 1.38629
20557 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20558 27 3.17435 2.64957 3.21919 0.16545 27 - -
20559 1.38629 1.38629 1.38629 1.38629
20560 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20561 28 3.52976 0.11925 3.57502 2.89885 28 - -
20562 1.38629 1.38629 1.38629 1.38629
20563 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20564 29 3.17435 2.64957 3.21919 0.16545 29 - -
20565 1.38629 1.38629 1.38629 1.38629
20566 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20567 30 3.52976 0.11925 3.57502 2.89885 30 - -
20568 1.38629 1.38629 1.38629 1.38629
20569 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20570 31 3.00534 3.67241 0.10830 3.58603 31 - -
20571 1.38629 1.38629 1.38629 1.38629
20572 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20573 32 3.52976 0.11925 3.57502 2.89885 32 - -
20574 1.38629 1.38629 1.38629 1.38629
20575 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20576 33 0.13127 3.46439 2.85631 3.37414 33 - -
20577 1.38629 1.38629 1.38629 1.38629
20578 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20579 34 3.17435 2.64957 3.21919 0.16545 34 - -
20580 1.38629 1.38629 1.38629 1.38629
20581 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20582 35 3.52976 0.11925 3.57502 2.89885 35 - -
20583 1.38629 1.38629 1.38629 1.38629
20584 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20585 36 3.00534 3.67241 0.10830 3.58603 36 - -
20586 1.38629 1.38629 1.38629 1.38629
20587 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20588 37 0.13127 3.46439 2.85631 3.37414 37 - -
20589 1.38629 1.38629 1.38629 1.38629
20590 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20591 38 3.17435 2.64957 3.21919 0.16545 38 - -
20592 1.38629 1.38629 1.38629 1.38629
20593 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20594 39 3.00534 3.67241 0.10830 3.58603 39 - -
20595 1.38629 1.38629 1.38629 1.38629
20596 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20597 40 0.13127 3.46439 2.85631 3.37414 40 - -
20598 1.38629 1.38629 1.38629 1.38629
20599 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20600 41 0.13127 3.46439 2.85631 3.37414 41 - -
20601 1.38629 1.38629 1.38629 1.38629
20602 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20603 42 1.68040 2.89345 0.36377 2.76041 42 - -
20604 1.38629 1.38629 1.38629 1.38629
20605 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20606 43 0.13127 3.46439 2.85631 3.37414 43 - -
20607 1.38629 1.38629 1.38629 1.38629
20608 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20609 44 0.13127 3.46439 2.85631 3.37414 44 - -
20610 1.38629 1.38629 1.38629 1.38629
20611 0.03511 4.06004 4.06004 1.46634 0.26236 1.09861 0.40547
20612 45 3.52976 0.11925 3.57502 2.89885 45 - -
20613 1.38629 1.38629 1.38629 1.38629
20614 0.01771 4.04264 * 1.46634 0.26236 0.00000 *
20615 //
20616 HMMER3/b [3.0 | March 2010]
20617 NAME 2_5.8_Tracheophyta_58S_start_oneb_long
20618 LENG 45
20619 ALPH DNA
20620 RF no
20621 CS no
20622 MAP yes
20623 DATE Fri Feb 17 15:54:52 2012
20624 NSEQ 3
20625 EFFN 3.000000
20626 CKSUM 2894283180
20627 STATS LOCAL MSV -8.1544 0.72049
20628 STATS LOCAL VITERBI -7.7198 0.72049
20629 STATS LOCAL FORWARD -4.0031 0.72049
20630 HMM A C G T
20631 m->m m->i m->d i->m i->i d->m d->d
20632 COMPO 1.40519 1.31757 1.52716 1.31028
20633 1.38629 1.38629 1.38629 1.38629
20634 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
20635 1 3.30705 0.14631 3.36166 2.73626 1 - -
20636 1.38629 1.38629 1.38629 1.38629
20637 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20638 2 0.15719 3.27118 2.73043 3.16274 2 - -
20639 1.38629 1.38629 1.38629 1.38629
20640 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20641 3 0.15719 3.27118 2.73043 3.16274 3 - -
20642 1.38629 1.38629 1.38629 1.38629
20643 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20644 4 3.30705 0.14631 3.36166 2.73626 4 - -
20645 1.38629 1.38629 1.38629 1.38629
20646 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20647 5 2.97980 2.52563 3.03204 0.19727 5 - -
20648 1.38629 1.38629 1.38629 1.38629
20649 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20650 6 2.97980 2.52563 3.03204 0.19727 6 - -
20651 1.38629 1.38629 1.38629 1.38629
20652 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20653 7 2.97980 2.52563 3.03204 0.19727 7 - -
20654 1.38629 1.38629 1.38629 1.38629
20655 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20656 8 2.97980 2.52563 3.03204 0.19727 8 - -
20657 1.38629 1.38629 1.38629 1.38629
20658 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20659 9 2.86982 3.47591 0.13017 3.36931 9 - -
20660 1.38629 1.38629 1.38629 1.38629
20661 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20662 10 2.86982 3.47591 0.13017 3.36931 10 - -
20663 1.38629 1.38629 1.38629 1.38629
20664 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20665 11 3.30705 0.14631 3.36166 2.73626 11 - -
20666 1.38629 1.38629 1.38629 1.38629
20667 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20668 12 0.15719 3.27118 2.73043 3.16274 12 - -
20669 1.38629 1.38629 1.38629 1.38629
20670 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20671 13 0.15719 3.27118 2.73043 3.16274 13 - -
20672 1.38629 1.38629 1.38629 1.38629
20673 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20674 14 3.30705 0.14631 3.36166 2.73626 14 - -
20675 1.38629 1.38629 1.38629 1.38629
20676 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20677 15 2.86982 3.47591 0.13017 3.36931 15 - -
20678 1.38629 1.38629 1.38629 1.38629
20679 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20680 16 2.86982 3.47591 0.13017 3.36931 16 - -
20681 1.38629 1.38629 1.38629 1.38629
20682 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20683 17 0.15719 3.27118 2.73043 3.16274 17 - -
20684 1.38629 1.38629 1.38629 1.38629
20685 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20686 18 2.97980 2.52563 3.03204 0.19727 18 - -
20687 1.38629 1.38629 1.38629 1.38629
20688 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20689 19 3.30705 0.14631 3.36166 2.73626 19 - -
20690 1.38629 1.38629 1.38629 1.38629
20691 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20692 20 2.97980 2.52563 3.03204 0.19727 20 - -
20693 1.38629 1.38629 1.38629 1.38629
20694 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20695 21 3.30705 0.14631 3.36166 2.73626 21 - -
20696 1.38629 1.38629 1.38629 1.38629
20697 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20698 22 2.97980 2.52563 3.03204 0.19727 22 - -
20699 1.38629 1.38629 1.38629 1.38629
20700 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20701 23 2.97980 2.52563 3.03204 0.19727 23 - -
20702 1.38629 1.38629 1.38629 1.38629
20703 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20704 24 2.86982 3.47591 0.13017 3.36931 24 - -
20705 1.38629 1.38629 1.38629 1.38629
20706 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20707 25 2.86982 3.47591 0.13017 3.36931 25 - -
20708 1.38629 1.38629 1.38629 1.38629
20709 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20710 26 2.97980 2.52563 3.03204 0.19727 26 - -
20711 1.38629 1.38629 1.38629 1.38629
20712 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20713 27 2.97980 2.52563 3.03204 0.19727 27 - -
20714 1.38629 1.38629 1.38629 1.38629
20715 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20716 28 3.30705 0.14631 3.36166 2.73626 28 - -
20717 1.38629 1.38629 1.38629 1.38629
20718 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20719 29 2.97980 2.52563 3.03204 0.19727 29 - -
20720 1.38629 1.38629 1.38629 1.38629
20721 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20722 30 3.30705 0.14631 3.36166 2.73626 30 - -
20723 1.38629 1.38629 1.38629 1.38629
20724 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20725 31 3.30705 0.14631 3.36166 2.73626 31 - -
20726 1.38629 1.38629 1.38629 1.38629
20727 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20728 32 3.30705 0.14631 3.36166 2.73626 32 - -
20729 1.38629 1.38629 1.38629 1.38629
20730 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20731 33 0.15719 3.27118 2.73043 3.16274 33 - -
20732 1.38629 1.38629 1.38629 1.38629
20733 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20734 34 2.97980 2.52563 3.03204 0.19727 34 - -
20735 1.38629 1.38629 1.38629 1.38629
20736 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20737 35 3.30705 0.14631 3.36166 2.73626 35 - -
20738 1.38629 1.38629 1.38629 1.38629
20739 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20740 36 2.86982 3.47591 0.13017 3.36931 36 - -
20741 1.38629 1.38629 1.38629 1.38629
20742 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20743 37 0.15719 3.27118 2.73043 3.16274 37 - -
20744 1.38629 1.38629 1.38629 1.38629
20745 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20746 38 2.97980 2.52563 3.03204 0.19727 38 - -
20747 1.38629 1.38629 1.38629 1.38629
20748 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20749 39 2.86982 3.47591 0.13017 3.36931 39 - -
20750 1.38629 1.38629 1.38629 1.38629
20751 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20752 40 0.15719 3.27118 2.73043 3.16274 40 - -
20753 1.38629 1.38629 1.38629 1.38629
20754 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20755 41 0.15719 3.27118 2.73043 3.16274 41 - -
20756 1.38629 1.38629 1.38629 1.38629
20757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20758 42 2.86982 3.47591 0.13017 3.36931 42 - -
20759 1.38629 1.38629 1.38629 1.38629
20760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20761 43 0.15719 3.27118 2.73043 3.16274 43 - -
20762 1.38629 1.38629 1.38629 1.38629
20763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20764 44 0.15719 3.27118 2.73043 3.16274 44 - -
20765 1.38629 1.38629 1.38629 1.38629
20766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
20767 45 3.30705 0.14631 3.36166 2.73626 45 - -
20768 1.38629 1.38629 1.38629 1.38629
20769 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
20770 //
20771 HMMER3/b [3.0 | March 2010]
20772 NAME 2_5.8_Tracheophyta_58S_start_onec_long
20773 LENG 45
20774 ALPH DNA
20775 RF no
20776 CS no
20777 MAP yes
20778 DATE Fri Feb 17 15:55:02 2012
20779 NSEQ 44
20780 EFFN 3.649658
20781 CKSUM 2327022651
20782 STATS LOCAL MSV -7.5756 0.71932
20783 STATS LOCAL VITERBI -7.5779 0.71932
20784 STATS LOCAL FORWARD -3.9495 0.71932
20785 HMM A C G T
20786 m->m m->i m->d i->m i->i d->m d->d
20787 COMPO 1.21489 1.46036 1.53943 1.36023
20788 1.38629 1.38629 1.38629 1.38629
20789 0.03479 4.06897 4.06897 1.46634 0.26236 0.00000 *
20790 1 0.29652 2.21705 2.54287 2.67327 1 - -
20791 1.38629 1.38629 1.38629 1.38629
20792 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20793 2 0.12947 3.47946 2.86600 3.39068 2 - -
20794 1.38629 1.38629 1.38629 1.38629
20795 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20796 3 0.12947 3.47946 2.86600 3.39068 3 - -
20797 1.38629 1.38629 1.38629 1.38629
20798 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20799 4 3.54700 0.11741 3.59149 2.91120 4 - -
20800 1.38629 1.38629 1.38629 1.38629
20801 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20802 5 3.18989 2.65942 3.23412 0.16318 5 - -
20803 1.38629 1.38629 1.38629 1.38629
20804 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20805 6 3.18989 2.65942 3.23412 0.16318 6 - -
20806 1.38629 1.38629 1.38629 1.38629
20807 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20808 7 3.18989 2.65942 3.23412 0.16318 7 - -
20809 1.38629 1.38629 1.38629 1.38629
20810 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20811 8 2.94187 0.29151 3.00554 1.89321 8 - -
20812 1.38629 1.38629 1.38629 1.38629
20813 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20814 9 0.12947 3.47946 2.86600 3.39068 9 - -
20815 1.38629 1.38629 1.38629 1.38629
20816 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20817 10 0.12947 3.47946 2.86600 3.39068 10 - -
20818 1.38629 1.38629 1.38629 1.38629
20819 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20820 11 3.54700 0.11741 3.59149 2.91120 11 - -
20821 1.38629 1.38629 1.38629 1.38629
20822 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20823 12 0.12947 3.47946 2.86600 3.39068 12 - -
20824 1.38629 1.38629 1.38629 1.38629
20825 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20826 13 0.12947 3.47946 2.86600 3.39068 13 - -
20827 1.38629 1.38629 1.38629 1.38629
20828 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20829 14 3.02953 0.25564 3.09094 2.02663 14 - -
20830 1.38629 1.38629 1.38629 1.38629
20831 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20832 15 3.01552 3.68741 0.10682 3.60266 15 - -
20833 1.38629 1.38629 1.38629 1.38629
20834 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20835 16 3.01552 3.68741 0.10682 3.60266 16 - -
20836 1.38629 1.38629 1.38629 1.38629
20837 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20838 17 0.12947 3.47946 2.86600 3.39068 17 - -
20839 1.38629 1.38629 1.38629 1.38629
20840 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20841 18 3.18989 2.65942 3.23412 0.16318 18 - -
20842 1.38629 1.38629 1.38629 1.38629
20843 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20844 19 3.54700 0.11741 3.59149 2.91120 19 - -
20845 1.38629 1.38629 1.38629 1.38629
20846 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20847 20 3.18989 2.65942 3.23412 0.16318 20 - -
20848 1.38629 1.38629 1.38629 1.38629
20849 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20850 21 3.54700 0.11741 3.59149 2.91120 21 - -
20851 1.38629 1.38629 1.38629 1.38629
20852 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20853 22 3.18989 2.65942 3.23412 0.16318 22 - -
20854 1.38629 1.38629 1.38629 1.38629
20855 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20856 23 3.18989 2.65942 3.23412 0.16318 23 - -
20857 1.38629 1.38629 1.38629 1.38629
20858 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20859 24 3.01552 3.68741 0.10682 3.60266 24 - -
20860 1.38629 1.38629 1.38629 1.38629
20861 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20862 25 3.01552 3.68741 0.10682 3.60266 25 - -
20863 1.38629 1.38629 1.38629 1.38629
20864 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20865 26 2.97399 2.15606 3.02698 0.24251 26 - -
20866 1.38629 1.38629 1.38629 1.38629
20867 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20868 27 3.18989 2.65942 3.23412 0.16318 27 - -
20869 1.38629 1.38629 1.38629 1.38629
20870 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20871 28 3.54700 0.11741 3.59149 2.91120 28 - -
20872 1.38629 1.38629 1.38629 1.38629
20873 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20874 29 2.98242 2.17364 3.03507 0.23890 29 - -
20875 1.38629 1.38629 1.38629 1.38629
20876 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20877 30 2.52061 2.13933 0.31228 2.65809 30 - -
20878 1.38629 1.38629 1.38629 1.38629
20879 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20880 31 3.01552 3.68741 0.10682 3.60266 31 - -
20881 1.38629 1.38629 1.38629 1.38629
20882 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20883 32 3.54700 0.11741 3.59149 2.91120 32 - -
20884 1.38629 1.38629 1.38629 1.38629
20885 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20886 33 0.12947 3.47946 2.86600 3.39068 33 - -
20887 1.38629 1.38629 1.38629 1.38629
20888 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20889 34 3.18989 2.65942 3.23412 0.16318 34 - -
20890 1.38629 1.38629 1.38629 1.38629
20891 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20892 35 3.54700 0.11741 3.59149 2.91120 35 - -
20893 1.38629 1.38629 1.38629 1.38629
20894 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20895 36 3.01552 3.68741 0.10682 3.60266 36 - -
20896 1.38629 1.38629 1.38629 1.38629
20897 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20898 37 0.12947 3.47946 2.86600 3.39068 37 - -
20899 1.38629 1.38629 1.38629 1.38629
20900 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20901 38 3.18989 2.65942 3.23412 0.16318 38 - -
20902 1.38629 1.38629 1.38629 1.38629
20903 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20904 39 3.01552 3.68741 0.10682 3.60266 39 - -
20905 1.38629 1.38629 1.38629 1.38629
20906 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20907 40 0.12947 3.47946 2.86600 3.39068 40 - -
20908 1.38629 1.38629 1.38629 1.38629
20909 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20910 41 0.12947 3.47946 2.86600 3.39068 41 - -
20911 1.38629 1.38629 1.38629 1.38629
20912 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20913 42 3.01552 3.68741 0.10682 3.60266 42 - -
20914 1.38629 1.38629 1.38629 1.38629
20915 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20916 43 0.12947 3.47946 2.86600 3.39068 43 - -
20917 1.38629 1.38629 1.38629 1.38629
20918 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20919 44 0.12947 3.47946 2.86600 3.39068 44 - -
20920 1.38629 1.38629 1.38629 1.38629
20921 0.03479 4.06897 4.06897 1.46634 0.26236 1.09861 0.40547
20922 45 3.54700 0.11741 3.59149 2.91120 45 - -
20923 1.38629 1.38629 1.38629 1.38629
20924 0.01755 4.05173 * 1.46634 0.26236 0.00000 *
20925 //
20926 HMMER3/b [3.0 | March 2010]
20927 NAME 2_5.8_Tracheophyta_58S_start_sevena_long
20928 LENG 45
20929 ALPH DNA
20930 RF no
20931 CS no
20932 MAP yes
20933 DATE Fri Feb 17 15:57:27 2012
20934 NSEQ 33
20935 EFFN 3.307251
20936 CKSUM 3974060790
20937 STATS LOCAL MSV -8.1230 0.71931
20938 STATS LOCAL VITERBI -7.6737 0.71931
20939 STATS LOCAL FORWARD -4.1389 0.71931
20940 HMM A C G T
20941 m->m m->i m->d i->m i->i d->m d->d
20942 COMPO 1.40155 1.34561 1.31245 1.49502
20943 1.38629 1.38629 1.38629 1.38629
20944 0.03699 4.00865 4.00865 1.46634 0.26236 0.00000 *
20945 1 2.94407 3.58273 0.11771 3.48688 1 - -
20946 1.38629 1.38629 1.38629 1.38629
20947 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20948 2 2.94407 3.58273 0.11771 3.48688 2 - -
20949 1.38629 1.38629 1.38629 1.38629
20950 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20951 3 0.14255 3.37531 2.79871 3.27650 3 - -
20952 1.38629 1.38629 1.38629 1.38629
20953 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20954 4 3.42740 0.13089 3.47710 2.82484 4 - -
20955 1.38629 1.38629 1.38629 1.38629
20956 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20957 5 3.08361 2.59196 3.13196 0.17948 5 - -
20958 1.38629 1.38629 1.38629 1.38629
20959 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20960 6 3.42740 0.13089 3.47710 2.82484 6 - -
20961 1.38629 1.38629 1.38629 1.38629
20962 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20963 7 3.42740 0.13089 3.47710 2.82484 7 - -
20964 1.38629 1.38629 1.38629 1.38629
20965 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20966 8 3.42740 0.13089 3.47710 2.82484 8 - -
20967 1.38629 1.38629 1.38629 1.38629
20968 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20969 9 2.94407 3.58273 0.11771 3.48688 9 - -
20970 1.38629 1.38629 1.38629 1.38629
20971 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20972 10 0.14255 3.37531 2.79871 3.27650 10 - -
20973 1.38629 1.38629 1.38629 1.38629
20974 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20975 11 3.42740 0.13089 3.47710 2.82484 11 - -
20976 1.38629 1.38629 1.38629 1.38629
20977 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20978 12 0.14255 3.37531 2.79871 3.27650 12 - -
20979 1.38629 1.38629 1.38629 1.38629
20980 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20981 13 0.14255 3.37531 2.79871 3.27650 13 - -
20982 1.38629 1.38629 1.38629 1.38629
20983 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20984 14 3.08361 2.59196 3.13196 0.17948 14 - -
20985 1.38629 1.38629 1.38629 1.38629
20986 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20987 15 2.94407 3.58273 0.11771 3.48688 15 - -
20988 1.38629 1.38629 1.38629 1.38629
20989 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20990 16 2.94407 3.58273 0.11771 3.48688 16 - -
20991 1.38629 1.38629 1.38629 1.38629
20992 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20993 17 0.14255 3.37531 2.79871 3.27650 17 - -
20994 1.38629 1.38629 1.38629 1.38629
20995 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20996 18 3.08361 2.59196 3.13196 0.17948 18 - -
20997 1.38629 1.38629 1.38629 1.38629
20998 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
20999 19 0.14255 3.37531 2.79871 3.27650 19 - -
21000 1.38629 1.38629 1.38629 1.38629
21001 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21002 20 3.08361 2.59196 3.13196 0.17948 20 - -
21003 1.38629 1.38629 1.38629 1.38629
21004 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21005 21 3.42740 0.13089 3.47710 2.82484 21 - -
21006 1.38629 1.38629 1.38629 1.38629
21007 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21008 22 3.08361 2.59196 3.13196 0.17948 22 - -
21009 1.38629 1.38629 1.38629 1.38629
21010 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21011 23 3.08361 2.59196 3.13196 0.17948 23 - -
21012 1.38629 1.38629 1.38629 1.38629
21013 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21014 24 2.94407 3.58273 0.11771 3.48688 24 - -
21015 1.38629 1.38629 1.38629 1.38629
21016 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21017 25 2.94407 3.58273 0.11771 3.48688 25 - -
21018 1.38629 1.38629 1.38629 1.38629
21019 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21020 26 3.42740 0.13089 3.47710 2.82484 26 - -
21021 1.38629 1.38629 1.38629 1.38629
21022 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21023 27 3.08361 2.59196 3.13196 0.17948 27 - -
21024 1.38629 1.38629 1.38629 1.38629
21025 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21026 28 3.42740 0.13089 3.47710 2.82484 28 - -
21027 1.38629 1.38629 1.38629 1.38629
21028 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21029 29 3.08361 2.59196 3.13196 0.17948 29 - -
21030 1.38629 1.38629 1.38629 1.38629
21031 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21032 30 2.65063 0.43216 2.72028 1.53976 30 - -
21033 1.38629 1.38629 1.38629 1.38629
21034 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21035 31 2.67056 3.44980 0.14636 3.34717 31 - -
21036 1.38629 1.38629 1.38629 1.38629
21037 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21038 32 3.42740 0.13089 3.47710 2.82484 32 - -
21039 1.38629 1.38629 1.38629 1.38629
21040 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21041 33 0.14255 3.37531 2.79871 3.27650 33 - -
21042 1.38629 1.38629 1.38629 1.38629
21043 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21044 34 3.08361 2.59196 3.13196 0.17948 34 - -
21045 1.38629 1.38629 1.38629 1.38629
21046 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21047 35 3.42740 0.13089 3.47710 2.82484 35 - -
21048 1.38629 1.38629 1.38629 1.38629
21049 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21050 36 2.94407 3.58273 0.11771 3.48688 36 - -
21051 1.38629 1.38629 1.38629 1.38629
21052 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21053 37 0.14255 3.37531 2.79871 3.27650 37 - -
21054 1.38629 1.38629 1.38629 1.38629
21055 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21056 38 3.08361 2.59196 3.13196 0.17948 38 - -
21057 1.38629 1.38629 1.38629 1.38629
21058 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21059 39 2.94407 3.58273 0.11771 3.48688 39 - -
21060 1.38629 1.38629 1.38629 1.38629
21061 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21062 40 0.14255 3.37531 2.79871 3.27650 40 - -
21063 1.38629 1.38629 1.38629 1.38629
21064 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21065 41 0.14255 3.37531 2.79871 3.27650 41 - -
21066 1.38629 1.38629 1.38629 1.38629
21067 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21068 42 2.94407 3.58273 0.11771 3.48688 42 - -
21069 1.38629 1.38629 1.38629 1.38629
21070 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21071 43 0.14255 3.37531 2.79871 3.27650 43 - -
21072 1.38629 1.38629 1.38629 1.38629
21073 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21074 44 2.94407 3.58273 0.11771 3.48688 44 - -
21075 1.38629 1.38629 1.38629 1.38629
21076 0.03699 4.00865 4.00865 1.46634 0.26236 1.09861 0.40547
21077 45 3.42740 0.13089 3.47710 2.82484 45 - -
21078 1.38629 1.38629 1.38629 1.38629
21079 0.01867 3.99033 * 1.46634 0.26236 0.00000 *
21080 //
21081 HMMER3/b [3.0 | March 2010]
21082 NAME 2_5.8_Tracheophyta_58S_start_sevenb_long
21083 LENG 45
21084 ALPH DNA
21085 RF no
21086 CS no
21087 MAP yes
21088 DATE Fri Feb 17 15:57:34 2012
21089 NSEQ 2
21090 EFFN 2.000000
21091 CKSUM 345249460
21092 STATS LOCAL MSV -7.4451 0.72877
21093 STATS LOCAL VITERBI -8.2827 0.72877
21094 STATS LOCAL FORWARD -3.2802 0.72877
21095 HMM A C G T
21096 m->m m->i m->d i->m i->i d->m d->d
21097 COMPO 1.27023 1.23254 1.61372 1.47606
21098 1.38629 1.38629 1.38629 1.38629
21099 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
21100 1 2.81865 0.23582 2.88868 2.35662 1 - -
21101 1.38629 1.38629 1.38629 1.38629
21102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21103 2 0.92825 2.28391 0.95698 2.13014 2 - -
21104 1.38629 1.38629 1.38629 1.38629
21105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21106 3 0.23862 2.84929 2.43386 2.70756 3 - -
21107 1.38629 1.38629 1.38629 1.38629
21108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21109 4 2.81865 0.23582 2.88868 2.35662 4 - -
21110 1.38629 1.38629 1.38629 1.38629
21111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21112 5 2.57915 2.25909 2.64442 0.28946 5 - -
21113 1.38629 1.38629 1.38629 1.38629
21114 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21115 6 2.81865 0.23582 2.88868 2.35662 6 - -
21116 1.38629 1.38629 1.38629 1.38629
21117 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21118 7 2.57915 2.25909 2.64442 0.28946 7 - -
21119 1.38629 1.38629 1.38629 1.38629
21120 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21121 8 2.81865 0.23582 2.88868 2.35662 8 - -
21122 1.38629 1.38629 1.38629 1.38629
21123 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21124 9 2.53331 3.02441 0.20344 2.88069 9 - -
21125 1.38629 1.38629 1.38629 1.38629
21126 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21127 10 2.53331 3.02441 0.20344 2.88069 10 - -
21128 1.38629 1.38629 1.38629 1.38629
21129 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21130 11 2.81865 0.23582 2.88868 2.35662 11 - -
21131 1.38629 1.38629 1.38629 1.38629
21132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21133 12 0.23862 2.84929 2.43386 2.70756 12 - -
21134 1.38629 1.38629 1.38629 1.38629
21135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21136 13 0.23862 2.84929 2.43386 2.70756 13 - -
21137 1.38629 1.38629 1.38629 1.38629
21138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21139 14 2.81865 0.23582 2.88868 2.35662 14 - -
21140 1.38629 1.38629 1.38629 1.38629
21141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21142 15 2.53331 3.02441 0.20344 2.88069 15 - -
21143 1.38629 1.38629 1.38629 1.38629
21144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21145 16 2.53331 3.02441 0.20344 2.88069 16 - -
21146 1.38629 1.38629 1.38629 1.38629
21147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21148 17 0.23862 2.84929 2.43386 2.70756 17 - -
21149 1.38629 1.38629 1.38629 1.38629
21150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21151 18 2.57915 2.25909 2.64442 0.28946 18 - -
21152 1.38629 1.38629 1.38629 1.38629
21153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21154 19 0.23862 2.84929 2.43386 2.70756 19 - -
21155 1.38629 1.38629 1.38629 1.38629
21156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21157 20 2.57915 2.25909 2.64442 0.28946 20 - -
21158 1.38629 1.38629 1.38629 1.38629
21159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21160 21 2.81865 0.23582 2.88868 2.35662 21 - -
21161 1.38629 1.38629 1.38629 1.38629
21162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21163 22 2.57915 2.25909 2.64442 0.28946 22 - -
21164 1.38629 1.38629 1.38629 1.38629
21165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21166 23 2.81865 0.23582 2.88868 2.35662 23 - -
21167 1.38629 1.38629 1.38629 1.38629
21168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21169 24 2.53331 3.02441 0.20344 2.88069 24 - -
21170 1.38629 1.38629 1.38629 1.38629
21171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21172 25 2.57915 2.25909 2.64442 0.28946 25 - -
21173 1.38629 1.38629 1.38629 1.38629
21174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21175 26 2.81865 0.23582 2.88868 2.35662 26 - -
21176 1.38629 1.38629 1.38629 1.38629
21177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21178 27 2.57915 2.25909 2.64442 0.28946 27 - -
21179 1.38629 1.38629 1.38629 1.38629
21180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21181 28 2.81865 0.23582 2.88868 2.35662 28 - -
21182 1.38629 1.38629 1.38629 1.38629
21183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21184 29 2.57915 2.25909 2.64442 0.28946 29 - -
21185 1.38629 1.38629 1.38629 1.38629
21186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21187 30 2.81865 0.23582 2.88868 2.35662 30 - -
21188 1.38629 1.38629 1.38629 1.38629
21189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21190 31 2.53331 3.02441 0.20344 2.88069 31 - -
21191 1.38629 1.38629 1.38629 1.38629
21192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21193 32 2.81865 0.23582 2.88868 2.35662 32 - -
21194 1.38629 1.38629 1.38629 1.38629
21195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21196 33 0.23862 2.84929 2.43386 2.70756 33 - -
21197 1.38629 1.38629 1.38629 1.38629
21198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21199 34 2.57915 2.25909 2.64442 0.28946 34 - -
21200 1.38629 1.38629 1.38629 1.38629
21201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21202 35 2.81865 0.23582 2.88868 2.35662 35 - -
21203 1.38629 1.38629 1.38629 1.38629
21204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21205 36 0.23862 2.84929 2.43386 2.70756 36 - -
21206 1.38629 1.38629 1.38629 1.38629
21207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21208 37 0.23862 2.84929 2.43386 2.70756 37 - -
21209 1.38629 1.38629 1.38629 1.38629
21210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21211 38 2.57915 2.25909 2.64442 0.28946 38 - -
21212 1.38629 1.38629 1.38629 1.38629
21213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21214 39 0.23862 2.84929 2.43386 2.70756 39 - -
21215 1.38629 1.38629 1.38629 1.38629
21216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21217 40 0.23862 2.84929 2.43386 2.70756 40 - -
21218 1.38629 1.38629 1.38629 1.38629
21219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21220 41 0.23862 2.84929 2.43386 2.70756 41 - -
21221 1.38629 1.38629 1.38629 1.38629
21222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21223 42 2.53331 3.02441 0.20344 2.88069 42 - -
21224 1.38629 1.38629 1.38629 1.38629
21225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21226 43 0.23862 2.84929 2.43386 2.70756 43 - -
21227 1.38629 1.38629 1.38629 1.38629
21228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21229 44 0.23862 2.84929 2.43386 2.70756 44 - -
21230 1.38629 1.38629 1.38629 1.38629
21231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21232 45 2.81865 0.23582 2.88868 2.35662 45 - -
21233 1.38629 1.38629 1.38629 1.38629
21234 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
21235 //
21236 HMMER3/b [3.0 | March 2010]
21237 NAME 2_5.8_Tracheophyta_58S_start_sevenc_long
21238 LENG 45
21239 ALPH DNA
21240 RF no
21241 CS no
21242 MAP yes
21243 DATE Fri Feb 17 15:57:45 2012
21244 NSEQ 2
21245 EFFN 2.000000
21246 CKSUM 984252909
21247 STATS LOCAL MSV -7.6013 0.72797
21248 STATS LOCAL VITERBI -8.1244 0.72797
21249 STATS LOCAL FORWARD -3.5282 0.72797
21250 HMM A C G T
21251 m->m m->i m->d i->m i->i d->m d->d
21252 COMPO 1.34254 1.39917 1.37271 1.43299
21253 1.38629 1.38629 1.38629 1.38629
21254 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
21255 1 2.81865 0.23582 2.88868 2.35662 1 - -
21256 1.38629 1.38629 1.38629 1.38629
21257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21258 2 2.53331 3.02441 0.20344 2.88069 2 - -
21259 1.38629 1.38629 1.38629 1.38629
21260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21261 3 0.23862 2.84929 2.43386 2.70756 3 - -
21262 1.38629 1.38629 1.38629 1.38629
21263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21264 4 2.81865 0.23582 2.88868 2.35662 4 - -
21265 1.38629 1.38629 1.38629 1.38629
21266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21267 5 2.57915 2.25909 2.64442 0.28946 5 - -
21268 1.38629 1.38629 1.38629 1.38629
21269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21270 6 2.81865 0.23582 2.88868 2.35662 6 - -
21271 1.38629 1.38629 1.38629 1.38629
21272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21273 7 2.57915 2.25909 2.64442 0.28946 7 - -
21274 1.38629 1.38629 1.38629 1.38629
21275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21276 8 2.81865 0.23582 2.88868 2.35662 8 - -
21277 1.38629 1.38629 1.38629 1.38629
21278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21279 9 2.53331 3.02441 0.20344 2.88069 9 - -
21280 1.38629 1.38629 1.38629 1.38629
21281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21282 10 0.23862 2.84929 2.43386 2.70756 10 - -
21283 1.38629 1.38629 1.38629 1.38629
21284 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21285 11 2.57915 2.25909 2.64442 0.28946 11 - -
21286 1.38629 1.38629 1.38629 1.38629
21287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21288 12 0.23862 2.84929 2.43386 2.70756 12 - -
21289 1.38629 1.38629 1.38629 1.38629
21290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21291 13 0.23862 2.84929 2.43386 2.70756 13 - -
21292 1.38629 1.38629 1.38629 1.38629
21293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21294 14 2.57915 2.25909 2.64442 0.28946 14 - -
21295 1.38629 1.38629 1.38629 1.38629
21296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21297 15 2.53331 3.02441 0.20344 2.88069 15 - -
21298 1.38629 1.38629 1.38629 1.38629
21299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21300 16 2.53331 3.02441 0.20344 2.88069 16 - -
21301 1.38629 1.38629 1.38629 1.38629
21302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21303 17 0.23862 2.84929 2.43386 2.70756 17 - -
21304 1.38629 1.38629 1.38629 1.38629
21305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21306 18 2.57915 2.25909 2.64442 0.28946 18 - -
21307 1.38629 1.38629 1.38629 1.38629
21308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21309 19 0.23862 2.84929 2.43386 2.70756 19 - -
21310 1.38629 1.38629 1.38629 1.38629
21311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21312 20 2.53331 3.02441 0.20344 2.88069 20 - -
21313 1.38629 1.38629 1.38629 1.38629
21314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21315 21 2.81865 0.23582 2.88868 2.35662 21 - -
21316 1.38629 1.38629 1.38629 1.38629
21317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21318 22 2.57915 2.25909 2.64442 0.28946 22 - -
21319 1.38629 1.38629 1.38629 1.38629
21320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21321 23 2.81865 0.23582 2.88868 2.35662 23 - -
21322 1.38629 1.38629 1.38629 1.38629
21323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21324 24 2.53331 3.02441 0.20344 2.88069 24 - -
21325 1.38629 1.38629 1.38629 1.38629
21326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21327 25 2.53331 3.02441 0.20344 2.88069 25 - -
21328 1.38629 1.38629 1.38629 1.38629
21329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21330 26 2.81865 0.23582 2.88868 2.35662 26 - -
21331 1.38629 1.38629 1.38629 1.38629
21332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21333 27 2.57915 2.25909 2.64442 0.28946 27 - -
21334 1.38629 1.38629 1.38629 1.38629
21335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21336 28 2.81865 0.23582 2.88868 2.35662 28 - -
21337 1.38629 1.38629 1.38629 1.38629
21338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21339 29 2.57915 2.25909 2.64442 0.28946 29 - -
21340 1.38629 1.38629 1.38629 1.38629
21341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21342 30 2.81865 0.23582 2.88868 2.35662 30 - -
21343 1.38629 1.38629 1.38629 1.38629
21344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21345 31 2.53331 3.02441 0.20344 2.88069 31 - -
21346 1.38629 1.38629 1.38629 1.38629
21347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21348 32 2.81865 0.23582 2.88868 2.35662 32 - -
21349 1.38629 1.38629 1.38629 1.38629
21350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21351 33 0.23862 2.84929 2.43386 2.70756 33 - -
21352 1.38629 1.38629 1.38629 1.38629
21353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21354 34 2.57915 2.25909 2.64442 0.28946 34 - -
21355 1.38629 1.38629 1.38629 1.38629
21356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21357 35 2.81865 0.23582 2.88868 2.35662 35 - -
21358 1.38629 1.38629 1.38629 1.38629
21359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21360 36 2.53331 3.02441 0.20344 2.88069 36 - -
21361 1.38629 1.38629 1.38629 1.38629
21362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21363 37 0.23862 2.84929 2.43386 2.70756 37 - -
21364 1.38629 1.38629 1.38629 1.38629
21365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21366 38 2.57915 2.25909 2.64442 0.28946 38 - -
21367 1.38629 1.38629 1.38629 1.38629
21368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21369 39 2.53331 3.02441 0.20344 2.88069 39 - -
21370 1.38629 1.38629 1.38629 1.38629
21371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21372 40 0.23862 2.84929 2.43386 2.70756 40 - -
21373 1.38629 1.38629 1.38629 1.38629
21374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21375 41 0.23862 2.84929 2.43386 2.70756 41 - -
21376 1.38629 1.38629 1.38629 1.38629
21377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21378 42 2.53331 3.02441 0.20344 2.88069 42 - -
21379 1.38629 1.38629 1.38629 1.38629
21380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21381 43 0.23862 2.84929 2.43386 2.70756 43 - -
21382 1.38629 1.38629 1.38629 1.38629
21383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21384 44 0.23862 2.84929 2.43386 2.70756 44 - -
21385 1.38629 1.38629 1.38629 1.38629
21386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21387 45 2.57915 2.25909 2.64442 0.28946 45 - -
21388 1.38629 1.38629 1.38629 1.38629
21389 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
21390 //
21391 HMMER3/b [3.0 | March 2010]
21392 NAME 2_5.8_Tracheophyta_58S_start_sevend_long
21393 LENG 45
21394 ALPH DNA
21395 RF no
21396 CS no
21397 MAP yes
21398 DATE Fri Feb 17 15:57:51 2012
21399 NSEQ 4
21400 EFFN 3.183594
21401 CKSUM 890420045
21402 STATS LOCAL MSV -8.1260 0.71933
21403 STATS LOCAL VITERBI -7.7591 0.71933
21404 STATS LOCAL FORWARD -3.7309 0.71933
21405 HMM A C G T
21406 m->m m->i m->d i->m i->i d->m d->d
21407 COMPO 1.40872 1.20773 1.38372 1.57976
21408 1.38629 1.38629 1.38629 1.38629
21409 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 *
21410 1 3.38051 0.13666 3.43217 2.79055 1 - -
21411 1.38629 1.38629 1.38629 1.38629
21412 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21413 2 2.91546 3.54130 0.12237 3.44120 2 - -
21414 1.38629 1.38629 1.38629 1.38629
21415 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21416 3 0.14807 3.33468 2.77222 3.23207 3 - -
21417 1.38629 1.38629 1.38629 1.38629
21418 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21419 4 3.38051 0.13666 3.43217 2.79055 4 - -
21420 1.38629 1.38629 1.38629 1.38629
21421 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21422 5 3.04283 2.56598 3.09273 0.18624 5 - -
21423 1.38629 1.38629 1.38629 1.38629
21424 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21425 6 3.38051 0.13666 3.43217 2.79055 6 - -
21426 1.38629 1.38629 1.38629 1.38629
21427 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21428 7 3.04283 2.56598 3.09273 0.18624 7 - -
21429 1.38629 1.38629 1.38629 1.38629
21430 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21431 8 3.38051 0.13666 3.43217 2.79055 8 - -
21432 1.38629 1.38629 1.38629 1.38629
21433 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21434 9 2.91546 3.54130 0.12237 3.44120 9 - -
21435 1.38629 1.38629 1.38629 1.38629
21436 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21437 10 2.91546 3.54130 0.12237 3.44120 10 - -
21438 1.38629 1.38629 1.38629 1.38629
21439 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21440 11 3.38051 0.13666 3.43217 2.79055 11 - -
21441 1.38629 1.38629 1.38629 1.38629
21442 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21443 12 0.14807 3.33468 2.77222 3.23207 12 - -
21444 1.38629 1.38629 1.38629 1.38629
21445 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21446 13 0.14807 3.33468 2.77222 3.23207 13 - -
21447 1.38629 1.38629 1.38629 1.38629
21448 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21449 14 3.38051 0.13666 3.43217 2.79055 14 - -
21450 1.38629 1.38629 1.38629 1.38629
21451 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21452 15 2.91546 3.54130 0.12237 3.44120 15 - -
21453 1.38629 1.38629 1.38629 1.38629
21454 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21455 16 2.91546 3.54130 0.12237 3.44120 16 - -
21456 1.38629 1.38629 1.38629 1.38629
21457 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21458 17 0.14807 3.33468 2.77222 3.23207 17 - -
21459 1.38629 1.38629 1.38629 1.38629
21460 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21461 18 3.04283 2.56598 3.09273 0.18624 18 - -
21462 1.38629 1.38629 1.38629 1.38629
21463 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21464 19 0.14807 3.33468 2.77222 3.23207 19 - -
21465 1.38629 1.38629 1.38629 1.38629
21466 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21467 20 3.04283 2.56598 3.09273 0.18624 20 - -
21468 1.38629 1.38629 1.38629 1.38629
21469 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21470 21 3.38051 0.13666 3.43217 2.79055 21 - -
21471 1.38629 1.38629 1.38629 1.38629
21472 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21473 22 3.04283 2.56598 3.09273 0.18624 22 - -
21474 1.38629 1.38629 1.38629 1.38629
21475 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21476 23 3.38051 0.13666 3.43217 2.79055 23 - -
21477 1.38629 1.38629 1.38629 1.38629
21478 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21479 24 2.91546 3.54130 0.12237 3.44120 24 - -
21480 1.38629 1.38629 1.38629 1.38629
21481 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21482 25 3.38051 0.13666 3.43217 2.79055 25 - -
21483 1.38629 1.38629 1.38629 1.38629
21484 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21485 26 2.91546 3.54130 0.12237 3.44120 26 - -
21486 1.38629 1.38629 1.38629 1.38629
21487 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21488 27 3.04283 2.56598 3.09273 0.18624 27 - -
21489 1.38629 1.38629 1.38629 1.38629
21490 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21491 28 3.38051 0.13666 3.43217 2.79055 28 - -
21492 1.38629 1.38629 1.38629 1.38629
21493 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21494 29 3.04283 2.56598 3.09273 0.18624 29 - -
21495 1.38629 1.38629 1.38629 1.38629
21496 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21497 30 3.38051 0.13666 3.43217 2.79055 30 - -
21498 1.38629 1.38629 1.38629 1.38629
21499 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21500 31 2.91546 3.54130 0.12237 3.44120 31 - -
21501 1.38629 1.38629 1.38629 1.38629
21502 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21503 32 3.38051 0.13666 3.43217 2.79055 32 - -
21504 1.38629 1.38629 1.38629 1.38629
21505 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21506 33 0.14807 3.33468 2.77222 3.23207 33 - -
21507 1.38629 1.38629 1.38629 1.38629
21508 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21509 34 3.04283 2.56598 3.09273 0.18624 34 - -
21510 1.38629 1.38629 1.38629 1.38629
21511 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21512 35 3.38051 0.13666 3.43217 2.79055 35 - -
21513 1.38629 1.38629 1.38629 1.38629
21514 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21515 36 2.91546 3.54130 0.12237 3.44120 36 - -
21516 1.38629 1.38629 1.38629 1.38629
21517 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21518 37 0.14807 3.33468 2.77222 3.23207 37 - -
21519 1.38629 1.38629 1.38629 1.38629
21520 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21521 38 3.04283 2.56598 3.09273 0.18624 38 - -
21522 1.38629 1.38629 1.38629 1.38629
21523 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21524 39 2.91546 3.54130 0.12237 3.44120 39 - -
21525 1.38629 1.38629 1.38629 1.38629
21526 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21527 40 0.14807 3.33468 2.77222 3.23207 40 - -
21528 1.38629 1.38629 1.38629 1.38629
21529 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21530 41 0.14807 3.33468 2.77222 3.23207 41 - -
21531 1.38629 1.38629 1.38629 1.38629
21532 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21533 42 2.91546 3.54130 0.12237 3.44120 42 - -
21534 1.38629 1.38629 1.38629 1.38629
21535 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21536 43 0.14807 3.33468 2.77222 3.23207 43 - -
21537 1.38629 1.38629 1.38629 1.38629
21538 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21539 44 0.14807 3.33468 2.77222 3.23207 44 - -
21540 1.38629 1.38629 1.38629 1.38629
21541 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
21542 45 3.38051 0.13666 3.43217 2.79055 45 - -
21543 1.38629 1.38629 1.38629 1.38629
21544 0.01911 3.96719 * 1.46634 0.26236 0.00000 *
21545 //
21546 HMMER3/b [3.0 | March 2010]
21547 NAME 2_5.8_Tracheophyta_58S_start_sevene_long
21548 LENG 45
21549 ALPH DNA
21550 RF no
21551 CS no
21552 MAP yes
21553 DATE Fri Feb 17 15:57:57 2012
21554 NSEQ 2
21555 EFFN 2.000000
21556 CKSUM 2718696898
21557 STATS LOCAL MSV -7.4885 0.72793
21558 STATS LOCAL VITERBI -8.0276 0.72793
21559 STATS LOCAL FORWARD -3.5798 0.72793
21560 HMM A C G T
21561 m->m m->i m->d i->m i->i d->m d->d
21562 COMPO 1.29079 1.34425 1.43332 1.48857
21563 1.38629 1.38629 1.38629 1.38629
21564 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
21565 1 2.81865 0.23582 2.88868 2.35662 1 - -
21566 1.38629 1.38629 1.38629 1.38629
21567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21568 2 2.53331 3.02441 0.20344 2.88069 2 - -
21569 1.38629 1.38629 1.38629 1.38629
21570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21571 3 0.23862 2.84929 2.43386 2.70756 3 - -
21572 1.38629 1.38629 1.38629 1.38629
21573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21574 4 2.81865 0.23582 2.88868 2.35662 4 - -
21575 1.38629 1.38629 1.38629 1.38629
21576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21577 5 2.57915 2.25909 2.64442 0.28946 5 - -
21578 1.38629 1.38629 1.38629 1.38629
21579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21580 6 2.81865 0.23582 2.88868 2.35662 6 - -
21581 1.38629 1.38629 1.38629 1.38629
21582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21583 7 2.57915 2.25909 2.64442 0.28946 7 - -
21584 1.38629 1.38629 1.38629 1.38629
21585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21586 8 2.81865 0.23582 2.88868 2.35662 8 - -
21587 1.38629 1.38629 1.38629 1.38629
21588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21589 9 2.53331 3.02441 0.20344 2.88069 9 - -
21590 1.38629 1.38629 1.38629 1.38629
21591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21592 10 0.23862 2.84929 2.43386 2.70756 10 - -
21593 1.38629 1.38629 1.38629 1.38629
21594 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21595 11 2.81865 0.23582 2.88868 2.35662 11 - -
21596 1.38629 1.38629 1.38629 1.38629
21597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21598 12 0.23862 2.84929 2.43386 2.70756 12 - -
21599 1.38629 1.38629 1.38629 1.38629
21600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21601 13 0.23862 2.84929 2.43386 2.70756 13 - -
21602 1.38629 1.38629 1.38629 1.38629
21603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21604 14 2.57915 2.25909 2.64442 0.28946 14 - -
21605 1.38629 1.38629 1.38629 1.38629
21606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21607 15 2.53331 3.02441 0.20344 2.88069 15 - -
21608 1.38629 1.38629 1.38629 1.38629
21609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21610 16 2.53331 3.02441 0.20344 2.88069 16 - -
21611 1.38629 1.38629 1.38629 1.38629
21612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21613 17 0.23862 2.84929 2.43386 2.70756 17 - -
21614 1.38629 1.38629 1.38629 1.38629
21615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21616 18 2.57915 2.25909 2.64442 0.28946 18 - -
21617 1.38629 1.38629 1.38629 1.38629
21618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21619 19 0.23862 2.84929 2.43386 2.70756 19 - -
21620 1.38629 1.38629 1.38629 1.38629
21621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21622 20 2.57915 2.25909 2.64442 0.28946 20 - -
21623 1.38629 1.38629 1.38629 1.38629
21624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21625 21 2.81865 0.23582 2.88868 2.35662 21 - -
21626 1.38629 1.38629 1.38629 1.38629
21627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21628 22 2.57915 2.25909 2.64442 0.28946 22 - -
21629 1.38629 1.38629 1.38629 1.38629
21630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21631 23 0.23862 2.84929 2.43386 2.70756 23 - -
21632 1.38629 1.38629 1.38629 1.38629
21633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21634 24 2.53331 3.02441 0.20344 2.88069 24 - -
21635 1.38629 1.38629 1.38629 1.38629
21636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21637 25 2.53331 3.02441 0.20344 2.88069 25 - -
21638 1.38629 1.38629 1.38629 1.38629
21639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21640 26 2.81865 0.23582 2.88868 2.35662 26 - -
21641 1.38629 1.38629 1.38629 1.38629
21642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21643 27 2.57915 2.25909 2.64442 0.28946 27 - -
21644 1.38629 1.38629 1.38629 1.38629
21645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21646 28 2.81865 0.23582 2.88868 2.35662 28 - -
21647 1.38629 1.38629 1.38629 1.38629
21648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21649 29 2.57915 2.25909 2.64442 0.28946 29 - -
21650 1.38629 1.38629 1.38629 1.38629
21651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21652 30 2.81865 0.23582 2.88868 2.35662 30 - -
21653 1.38629 1.38629 1.38629 1.38629
21654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21655 31 2.53331 3.02441 0.20344 2.88069 31 - -
21656 1.38629 1.38629 1.38629 1.38629
21657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21658 32 2.81865 0.23582 2.88868 2.35662 32 - -
21659 1.38629 1.38629 1.38629 1.38629
21660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21661 33 0.23862 2.84929 2.43386 2.70756 33 - -
21662 1.38629 1.38629 1.38629 1.38629
21663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21664 34 2.57915 2.25909 2.64442 0.28946 34 - -
21665 1.38629 1.38629 1.38629 1.38629
21666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21667 35 2.81865 0.23582 2.88868 2.35662 35 - -
21668 1.38629 1.38629 1.38629 1.38629
21669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21670 36 2.53331 3.02441 0.20344 2.88069 36 - -
21671 1.38629 1.38629 1.38629 1.38629
21672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21673 37 0.23862 2.84929 2.43386 2.70756 37 - -
21674 1.38629 1.38629 1.38629 1.38629
21675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21676 38 2.57915 2.25909 2.64442 0.28946 38 - -
21677 1.38629 1.38629 1.38629 1.38629
21678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21679 39 2.53331 3.02441 0.20344 2.88069 39 - -
21680 1.38629 1.38629 1.38629 1.38629
21681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21682 40 0.23862 2.84929 2.43386 2.70756 40 - -
21683 1.38629 1.38629 1.38629 1.38629
21684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21685 41 0.23862 2.84929 2.43386 2.70756 41 - -
21686 1.38629 1.38629 1.38629 1.38629
21687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21688 42 2.53331 3.02441 0.20344 2.88069 42 - -
21689 1.38629 1.38629 1.38629 1.38629
21690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21691 43 0.23862 2.84929 2.43386 2.70756 43 - -
21692 1.38629 1.38629 1.38629 1.38629
21693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21694 44 0.23862 2.84929 2.43386 2.70756 44 - -
21695 1.38629 1.38629 1.38629 1.38629
21696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21697 45 2.81865 0.23582 2.88868 2.35662 45 - -
21698 1.38629 1.38629 1.38629 1.38629
21699 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
21700 //
21701 HMMER3/b [3.0 | March 2010]
21702 NAME 2_5.8_Tracheophyta_58S_start_sevenf_long
21703 LENG 45
21704 ALPH DNA
21705 RF no
21706 CS no
21707 MAP yes
21708 DATE Fri Feb 17 15:58:01 2012
21709 NSEQ 2
21710 EFFN 2.000000
21711 CKSUM 1738718247
21712 STATS LOCAL MSV -7.5475 0.72825
21713 STATS LOCAL VITERBI -8.3216 0.72825
21714 STATS LOCAL FORWARD -3.4732 0.72825
21715 HMM A C G T
21716 m->m m->i m->d i->m i->i d->m d->d
21717 COMPO 1.28986 1.39643 1.49646 1.37323
21718 1.38629 1.38629 1.38629 1.38629
21719 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
21720 1 2.57915 2.25909 2.64442 0.28946 1 - -
21721 1.38629 1.38629 1.38629 1.38629
21722 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21723 2 2.53331 3.02441 0.20344 2.88069 2 - -
21724 1.38629 1.38629 1.38629 1.38629
21725 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21726 3 0.23862 2.84929 2.43386 2.70756 3 - -
21727 1.38629 1.38629 1.38629 1.38629
21728 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21729 4 2.81865 0.23582 2.88868 2.35662 4 - -
21730 1.38629 1.38629 1.38629 1.38629
21731 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21732 5 2.57915 2.25909 2.64442 0.28946 5 - -
21733 1.38629 1.38629 1.38629 1.38629
21734 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21735 6 2.81865 0.23582 2.88868 2.35662 6 - -
21736 1.38629 1.38629 1.38629 1.38629
21737 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21738 7 2.57915 2.25909 2.64442 0.28946 7 - -
21739 1.38629 1.38629 1.38629 1.38629
21740 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21741 8 2.81865 0.23582 2.88868 2.35662 8 - -
21742 1.38629 1.38629 1.38629 1.38629
21743 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21744 9 2.53331 3.02441 0.20344 2.88069 9 - -
21745 1.38629 1.38629 1.38629 1.38629
21746 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21747 10 2.53331 3.02441 0.20344 2.88069 10 - -
21748 1.38629 1.38629 1.38629 1.38629
21749 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21750 11 2.57915 2.25909 2.64442 0.28946 11 - -
21751 1.38629 1.38629 1.38629 1.38629
21752 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21753 12 0.23862 2.84929 2.43386 2.70756 12 - -
21754 1.38629 1.38629 1.38629 1.38629
21755 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21756 13 0.23862 2.84929 2.43386 2.70756 13 - -
21757 1.38629 1.38629 1.38629 1.38629
21758 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21759 14 2.81865 0.23582 2.88868 2.35662 14 - -
21760 1.38629 1.38629 1.38629 1.38629
21761 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21762 15 0.23862 2.84929 2.43386 2.70756 15 - -
21763 1.38629 1.38629 1.38629 1.38629
21764 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21765 16 2.53331 3.02441 0.20344 2.88069 16 - -
21766 1.38629 1.38629 1.38629 1.38629
21767 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21768 17 0.23862 2.84929 2.43386 2.70756 17 - -
21769 1.38629 1.38629 1.38629 1.38629
21770 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21771 18 2.57915 2.25909 2.64442 0.28946 18 - -
21772 1.38629 1.38629 1.38629 1.38629
21773 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21774 19 0.23862 2.84929 2.43386 2.70756 19 - -
21775 1.38629 1.38629 1.38629 1.38629
21776 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21777 20 2.57915 2.25909 2.64442 0.28946 20 - -
21778 1.38629 1.38629 1.38629 1.38629
21779 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21780 21 2.81865 0.23582 2.88868 2.35662 21 - -
21781 1.38629 1.38629 1.38629 1.38629
21782 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21783 22 2.57915 2.25909 2.64442 0.28946 22 - -
21784 1.38629 1.38629 1.38629 1.38629
21785 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21786 23 2.81865 0.23582 2.88868 2.35662 23 - -
21787 1.38629 1.38629 1.38629 1.38629
21788 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21789 24 0.23862 2.84929 2.43386 2.70756 24 - -
21790 1.38629 1.38629 1.38629 1.38629
21791 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21792 25 2.53331 3.02441 0.20344 2.88069 25 - -
21793 1.38629 1.38629 1.38629 1.38629
21794 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21795 26 2.81865 0.23582 2.88868 2.35662 26 - -
21796 1.38629 1.38629 1.38629 1.38629
21797 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21798 27 2.57915 2.25909 2.64442 0.28946 27 - -
21799 1.38629 1.38629 1.38629 1.38629
21800 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21801 28 2.81865 0.23582 2.88868 2.35662 28 - -
21802 1.38629 1.38629 1.38629 1.38629
21803 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21804 29 2.57915 2.25909 2.64442 0.28946 29 - -
21805 1.38629 1.38629 1.38629 1.38629
21806 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21807 30 2.81865 0.23582 2.88868 2.35662 30 - -
21808 1.38629 1.38629 1.38629 1.38629
21809 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21810 31 2.53331 3.02441 0.20344 2.88069 31 - -
21811 1.38629 1.38629 1.38629 1.38629
21812 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21813 32 2.81865 0.23582 2.88868 2.35662 32 - -
21814 1.38629 1.38629 1.38629 1.38629
21815 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21816 33 0.23862 2.84929 2.43386 2.70756 33 - -
21817 1.38629 1.38629 1.38629 1.38629
21818 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21819 34 2.57915 2.25909 2.64442 0.28946 34 - -
21820 1.38629 1.38629 1.38629 1.38629
21821 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21822 35 2.57915 2.25909 2.64442 0.28946 35 - -
21823 1.38629 1.38629 1.38629 1.38629
21824 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21825 36 2.53331 3.02441 0.20344 2.88069 36 - -
21826 1.38629 1.38629 1.38629 1.38629
21827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21828 37 0.23862 2.84929 2.43386 2.70756 37 - -
21829 1.38629 1.38629 1.38629 1.38629
21830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21831 38 2.57915 2.25909 2.64442 0.28946 38 - -
21832 1.38629 1.38629 1.38629 1.38629
21833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21834 39 2.53331 3.02441 0.20344 2.88069 39 - -
21835 1.38629 1.38629 1.38629 1.38629
21836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21837 40 0.23862 2.84929 2.43386 2.70756 40 - -
21838 1.38629 1.38629 1.38629 1.38629
21839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21840 41 0.23862 2.84929 2.43386 2.70756 41 - -
21841 1.38629 1.38629 1.38629 1.38629
21842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21843 42 2.53331 3.02441 0.20344 2.88069 42 - -
21844 1.38629 1.38629 1.38629 1.38629
21845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21846 43 0.23862 2.84929 2.43386 2.70756 43 - -
21847 1.38629 1.38629 1.38629 1.38629
21848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21849 44 0.23862 2.84929 2.43386 2.70756 44 - -
21850 1.38629 1.38629 1.38629 1.38629
21851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
21852 45 2.81865 0.23582 2.88868 2.35662 45 - -
21853 1.38629 1.38629 1.38629 1.38629
21854 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
21855 //
21856 HMMER3/b [3.0 | March 2010]
21857 NAME 2_5.8_Tracheophyta_58S_start_seveng_long
21858 LENG 45
21859 ALPH DNA
21860 RF no
21861 CS no
21862 MAP yes
21863 DATE Fri Feb 17 15:58:06 2012
21864 NSEQ 8
21865 EFFN 3.160156
21866 CKSUM 1659179232
21867 STATS LOCAL MSV -7.9878 0.71933
21868 STATS LOCAL VITERBI -7.5924 0.71933
21869 STATS LOCAL FORWARD -3.9345 0.71933
21870 HMM A C G T
21871 m->m m->i m->d i->m i->i d->m d->d
21872 COMPO 1.40981 1.15513 1.38466 1.65870
21873 1.38629 1.38629 1.38629 1.38629
21874 0.03803 3.98158 3.98158 1.46634 0.26236 0.00000 *
21875 1 3.37140 0.13782 3.42342 2.78385 1 - -
21876 1.38629 1.38629 1.38629 1.38629
21877 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21878 2 2.90985 3.53322 0.12331 3.43230 2 - -
21879 1.38629 1.38629 1.38629 1.38629
21880 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21881 3 0.14916 3.32679 2.76705 3.22344 3 - -
21882 1.38629 1.38629 1.38629 1.38629
21883 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21884 4 3.37140 0.13782 3.42342 2.78385 4 - -
21885 1.38629 1.38629 1.38629 1.38629
21886 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21887 5 3.03495 2.56095 3.08514 0.18757 5 - -
21888 1.38629 1.38629 1.38629 1.38629
21889 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21890 6 3.37140 0.13782 3.42342 2.78385 6 - -
21891 1.38629 1.38629 1.38629 1.38629
21892 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21893 7 3.03495 2.56095 3.08514 0.18757 7 - -
21894 1.38629 1.38629 1.38629 1.38629
21895 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21896 8 3.37140 0.13782 3.42342 2.78385 8 - -
21897 1.38629 1.38629 1.38629 1.38629
21898 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21899 9 2.90985 3.53322 0.12331 3.43230 9 - -
21900 1.38629 1.38629 1.38629 1.38629
21901 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21902 10 2.90985 3.53322 0.12331 3.43230 10 - -
21903 1.38629 1.38629 1.38629 1.38629
21904 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21905 11 3.37140 0.13782 3.42342 2.78385 11 - -
21906 1.38629 1.38629 1.38629 1.38629
21907 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21908 12 0.14916 3.32679 2.76705 3.22344 12 - -
21909 1.38629 1.38629 1.38629 1.38629
21910 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21911 13 0.14916 3.32679 2.76705 3.22344 13 - -
21912 1.38629 1.38629 1.38629 1.38629
21913 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21914 14 3.37140 0.13782 3.42342 2.78385 14 - -
21915 1.38629 1.38629 1.38629 1.38629
21916 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21917 15 2.90985 3.53322 0.12331 3.43230 15 - -
21918 1.38629 1.38629 1.38629 1.38629
21919 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21920 16 2.90985 3.53322 0.12331 3.43230 16 - -
21921 1.38629 1.38629 1.38629 1.38629
21922 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21923 17 0.14916 3.32679 2.76705 3.22344 17 - -
21924 1.38629 1.38629 1.38629 1.38629
21925 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21926 18 3.03495 2.56095 3.08514 0.18757 18 - -
21927 1.38629 1.38629 1.38629 1.38629
21928 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21929 19 0.14916 3.32679 2.76705 3.22344 19 - -
21930 1.38629 1.38629 1.38629 1.38629
21931 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21932 20 3.03495 2.56095 3.08514 0.18757 20 - -
21933 1.38629 1.38629 1.38629 1.38629
21934 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21935 21 3.37140 0.13782 3.42342 2.78385 21 - -
21936 1.38629 1.38629 1.38629 1.38629
21937 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21938 22 3.03495 2.56095 3.08514 0.18757 22 - -
21939 1.38629 1.38629 1.38629 1.38629
21940 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21941 23 3.03495 2.56095 3.08514 0.18757 23 - -
21942 1.38629 1.38629 1.38629 1.38629
21943 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21944 24 2.90985 3.53322 0.12331 3.43230 24 - -
21945 1.38629 1.38629 1.38629 1.38629
21946 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21947 25 2.90985 3.53322 0.12331 3.43230 25 - -
21948 1.38629 1.38629 1.38629 1.38629
21949 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21950 26 3.37140 0.13782 3.42342 2.78385 26 - -
21951 1.38629 1.38629 1.38629 1.38629
21952 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21953 27 3.03495 2.56095 3.08514 0.18757 27 - -
21954 1.38629 1.38629 1.38629 1.38629
21955 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21956 28 3.37140 0.13782 3.42342 2.78385 28 - -
21957 1.38629 1.38629 1.38629 1.38629
21958 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21959 29 3.37140 0.13782 3.42342 2.78385 29 - -
21960 1.38629 1.38629 1.38629 1.38629
21961 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21962 30 3.37140 0.13782 3.42342 2.78385 30 - -
21963 1.38629 1.38629 1.38629 1.38629
21964 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21965 31 2.90985 3.53322 0.12331 3.43230 31 - -
21966 1.38629 1.38629 1.38629 1.38629
21967 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21968 32 3.37140 0.13782 3.42342 2.78385 32 - -
21969 1.38629 1.38629 1.38629 1.38629
21970 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21971 33 3.37140 0.13782 3.42342 2.78385 33 - -
21972 1.38629 1.38629 1.38629 1.38629
21973 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21974 34 0.14916 3.32679 2.76705 3.22344 34 - -
21975 1.38629 1.38629 1.38629 1.38629
21976 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21977 35 3.37140 0.13782 3.42342 2.78385 35 - -
21978 1.38629 1.38629 1.38629 1.38629
21979 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21980 36 2.90985 3.53322 0.12331 3.43230 36 - -
21981 1.38629 1.38629 1.38629 1.38629
21982 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21983 37 0.14916 3.32679 2.76705 3.22344 37 - -
21984 1.38629 1.38629 1.38629 1.38629
21985 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21986 38 3.03495 2.56095 3.08514 0.18757 38 - -
21987 1.38629 1.38629 1.38629 1.38629
21988 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21989 39 2.90985 3.53322 0.12331 3.43230 39 - -
21990 1.38629 1.38629 1.38629 1.38629
21991 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21992 40 0.14916 3.32679 2.76705 3.22344 40 - -
21993 1.38629 1.38629 1.38629 1.38629
21994 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21995 41 0.14916 3.32679 2.76705 3.22344 41 - -
21996 1.38629 1.38629 1.38629 1.38629
21997 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
21998 42 2.90985 3.53322 0.12331 3.43230 42 - -
21999 1.38629 1.38629 1.38629 1.38629
22000 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
22001 43 0.14916 3.32679 2.76705 3.22344 43 - -
22002 1.38629 1.38629 1.38629 1.38629
22003 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
22004 44 0.14916 3.32679 2.76705 3.22344 44 - -
22005 1.38629 1.38629 1.38629 1.38629
22006 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547
22007 45 3.37140 0.13782 3.42342 2.78385 45 - -
22008 1.38629 1.38629 1.38629 1.38629
22009 0.01919 3.96275 * 1.46634 0.26236 0.00000 *
22010 //
22011 HMMER3/b [3.0 | March 2010]
22012 NAME 2_5.8_Tracheophyta_58S_start_sevenh_long
22013 LENG 45
22014 ALPH DNA
22015 RF no
22016 CS no
22017 MAP yes
22018 DATE Fri Feb 17 15:58:12 2012
22019 NSEQ 3
22020 EFFN 3.000000
22021 CKSUM 3370148041
22022 STATS LOCAL MSV -8.0586 0.72009
22023 STATS LOCAL VITERBI -7.6977 0.72009
22024 STATS LOCAL FORWARD -3.8459 0.72009
22025 HMM A C G T
22026 m->m m->i m->d i->m i->i d->m d->d
22027 COMPO 1.34211 1.26931 1.38024 1.57910
22028 1.38629 1.38629 1.38629 1.38629
22029 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22030 1 3.30705 0.14631 3.36166 2.73626 1 - -
22031 1.38629 1.38629 1.38629 1.38629
22032 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22033 2 2.86982 3.47591 0.13017 3.36931 2 - -
22034 1.38629 1.38629 1.38629 1.38629
22035 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22036 3 0.15719 3.27118 2.73043 3.16274 3 - -
22037 1.38629 1.38629 1.38629 1.38629
22038 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22039 4 3.30705 0.14631 3.36166 2.73626 4 - -
22040 1.38629 1.38629 1.38629 1.38629
22041 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22042 5 2.97980 2.52563 3.03204 0.19727 5 - -
22043 1.38629 1.38629 1.38629 1.38629
22044 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22045 6 3.30705 0.14631 3.36166 2.73626 6 - -
22046 1.38629 1.38629 1.38629 1.38629
22047 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22048 7 2.97980 2.52563 3.03204 0.19727 7 - -
22049 1.38629 1.38629 1.38629 1.38629
22050 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22051 8 3.30705 0.14631 3.36166 2.73626 8 - -
22052 1.38629 1.38629 1.38629 1.38629
22053 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22054 9 2.86982 3.47591 0.13017 3.36931 9 - -
22055 1.38629 1.38629 1.38629 1.38629
22056 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22057 10 2.86982 3.47591 0.13017 3.36931 10 - -
22058 1.38629 1.38629 1.38629 1.38629
22059 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22060 11 3.30705 0.14631 3.36166 2.73626 11 - -
22061 1.38629 1.38629 1.38629 1.38629
22062 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22063 12 0.15719 3.27118 2.73043 3.16274 12 - -
22064 1.38629 1.38629 1.38629 1.38629
22065 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22066 13 0.15719 3.27118 2.73043 3.16274 13 - -
22067 1.38629 1.38629 1.38629 1.38629
22068 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22069 14 3.30705 0.14631 3.36166 2.73626 14 - -
22070 1.38629 1.38629 1.38629 1.38629
22071 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22072 15 2.86982 3.47591 0.13017 3.36931 15 - -
22073 1.38629 1.38629 1.38629 1.38629
22074 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22075 16 2.86982 3.47591 0.13017 3.36931 16 - -
22076 1.38629 1.38629 1.38629 1.38629
22077 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22078 17 0.15719 3.27118 2.73043 3.16274 17 - -
22079 1.38629 1.38629 1.38629 1.38629
22080 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22081 18 2.97980 2.52563 3.03204 0.19727 18 - -
22082 1.38629 1.38629 1.38629 1.38629
22083 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22084 19 0.15719 3.27118 2.73043 3.16274 19 - -
22085 1.38629 1.38629 1.38629 1.38629
22086 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22087 20 2.97980 2.52563 3.03204 0.19727 20 - -
22088 1.38629 1.38629 1.38629 1.38629
22089 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22090 21 3.30705 0.14631 3.36166 2.73626 21 - -
22091 1.38629 1.38629 1.38629 1.38629
22092 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22093 22 2.97980 2.52563 3.03204 0.19727 22 - -
22094 1.38629 1.38629 1.38629 1.38629
22095 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22096 23 3.30705 0.14631 3.36166 2.73626 23 - -
22097 1.38629 1.38629 1.38629 1.38629
22098 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22099 24 2.86982 3.47591 0.13017 3.36931 24 - -
22100 1.38629 1.38629 1.38629 1.38629
22101 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22102 25 2.86982 3.47591 0.13017 3.36931 25 - -
22103 1.38629 1.38629 1.38629 1.38629
22104 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22105 26 3.30705 0.14631 3.36166 2.73626 26 - -
22106 1.38629 1.38629 1.38629 1.38629
22107 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22108 27 2.97980 2.52563 3.03204 0.19727 27 - -
22109 1.38629 1.38629 1.38629 1.38629
22110 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22111 28 3.30705 0.14631 3.36166 2.73626 28 - -
22112 1.38629 1.38629 1.38629 1.38629
22113 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22114 29 2.97980 2.52563 3.03204 0.19727 29 - -
22115 1.38629 1.38629 1.38629 1.38629
22116 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22117 30 3.30705 0.14631 3.36166 2.73626 30 - -
22118 1.38629 1.38629 1.38629 1.38629
22119 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22120 31 2.86982 3.47591 0.13017 3.36931 31 - -
22121 1.38629 1.38629 1.38629 1.38629
22122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22123 32 2.97980 2.52563 3.03204 0.19727 32 - -
22124 1.38629 1.38629 1.38629 1.38629
22125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22126 33 0.15719 3.27118 2.73043 3.16274 33 - -
22127 1.38629 1.38629 1.38629 1.38629
22128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22129 34 0.15719 3.27118 2.73043 3.16274 34 - -
22130 1.38629 1.38629 1.38629 1.38629
22131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22132 35 3.30705 0.14631 3.36166 2.73626 35 - -
22133 1.38629 1.38629 1.38629 1.38629
22134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22135 36 2.86982 3.47591 0.13017 3.36931 36 - -
22136 1.38629 1.38629 1.38629 1.38629
22137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22138 37 0.15719 3.27118 2.73043 3.16274 37 - -
22139 1.38629 1.38629 1.38629 1.38629
22140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22141 38 2.97980 2.52563 3.03204 0.19727 38 - -
22142 1.38629 1.38629 1.38629 1.38629
22143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22144 39 2.86982 3.47591 0.13017 3.36931 39 - -
22145 1.38629 1.38629 1.38629 1.38629
22146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22147 40 0.15719 3.27118 2.73043 3.16274 40 - -
22148 1.38629 1.38629 1.38629 1.38629
22149 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22150 41 0.15719 3.27118 2.73043 3.16274 41 - -
22151 1.38629 1.38629 1.38629 1.38629
22152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22153 42 2.86982 3.47591 0.13017 3.36931 42 - -
22154 1.38629 1.38629 1.38629 1.38629
22155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22156 43 0.15719 3.27118 2.73043 3.16274 43 - -
22157 1.38629 1.38629 1.38629 1.38629
22158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22159 44 0.15719 3.27118 2.73043 3.16274 44 - -
22160 1.38629 1.38629 1.38629 1.38629
22161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22162 45 3.30705 0.14631 3.36166 2.73626 45 - -
22163 1.38629 1.38629 1.38629 1.38629
22164 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
22165 //
22166 HMMER3/b [3.0 | March 2010]
22167 NAME 2_5.8_Tracheophyta_58S_start_seveni_long
22168 LENG 45
22169 ALPH DNA
22170 RF no
22171 CS no
22172 MAP yes
22173 DATE Fri Feb 17 15:58:18 2012
22174 NSEQ 3
22175 EFFN 3.000000
22176 CKSUM 2759242053
22177 STATS LOCAL MSV -7.9338 0.72035
22178 STATS LOCAL VITERBI -7.6316 0.72035
22179 STATS LOCAL FORWARD -3.8921 0.72035
22180 HMM A C G T
22181 m->m m->i m->d i->m i->i d->m d->d
22182 COMPO 1.28091 1.32591 1.52215 1.43375
22183 1.38629 1.38629 1.38629 1.38629
22184 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22185 1 2.97980 2.52563 3.03204 0.19727 1 - -
22186 1.38629 1.38629 1.38629 1.38629
22187 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22188 2 2.86982 3.47591 0.13017 3.36931 2 - -
22189 1.38629 1.38629 1.38629 1.38629
22190 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22191 3 0.15719 3.27118 2.73043 3.16274 3 - -
22192 1.38629 1.38629 1.38629 1.38629
22193 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22194 4 3.30705 0.14631 3.36166 2.73626 4 - -
22195 1.38629 1.38629 1.38629 1.38629
22196 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22197 5 2.97980 2.52563 3.03204 0.19727 5 - -
22198 1.38629 1.38629 1.38629 1.38629
22199 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22200 6 3.30705 0.14631 3.36166 2.73626 6 - -
22201 1.38629 1.38629 1.38629 1.38629
22202 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22203 7 2.97980 2.52563 3.03204 0.19727 7 - -
22204 1.38629 1.38629 1.38629 1.38629
22205 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22206 8 3.30705 0.14631 3.36166 2.73626 8 - -
22207 1.38629 1.38629 1.38629 1.38629
22208 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22209 9 2.86982 3.47591 0.13017 3.36931 9 - -
22210 1.38629 1.38629 1.38629 1.38629
22211 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22212 10 0.15719 3.27118 2.73043 3.16274 10 - -
22213 1.38629 1.38629 1.38629 1.38629
22214 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22215 11 3.30705 0.14631 3.36166 2.73626 11 - -
22216 1.38629 1.38629 1.38629 1.38629
22217 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22218 12 0.15719 3.27118 2.73043 3.16274 12 - -
22219 1.38629 1.38629 1.38629 1.38629
22220 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22221 13 0.15719 3.27118 2.73043 3.16274 13 - -
22222 1.38629 1.38629 1.38629 1.38629
22223 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22224 14 3.30705 0.14631 3.36166 2.73626 14 - -
22225 1.38629 1.38629 1.38629 1.38629
22226 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22227 15 2.86982 3.47591 0.13017 3.36931 15 - -
22228 1.38629 1.38629 1.38629 1.38629
22229 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22230 16 2.86982 3.47591 0.13017 3.36931 16 - -
22231 1.38629 1.38629 1.38629 1.38629
22232 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22233 17 0.15719 3.27118 2.73043 3.16274 17 - -
22234 1.38629 1.38629 1.38629 1.38629
22235 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22236 18 2.97980 2.52563 3.03204 0.19727 18 - -
22237 1.38629 1.38629 1.38629 1.38629
22238 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22239 19 0.15719 3.27118 2.73043 3.16274 19 - -
22240 1.38629 1.38629 1.38629 1.38629
22241 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22242 20 2.97980 2.52563 3.03204 0.19727 20 - -
22243 1.38629 1.38629 1.38629 1.38629
22244 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22245 21 3.30705 0.14631 3.36166 2.73626 21 - -
22246 1.38629 1.38629 1.38629 1.38629
22247 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22248 22 2.97980 2.52563 3.03204 0.19727 22 - -
22249 1.38629 1.38629 1.38629 1.38629
22250 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22251 23 3.30705 0.14631 3.36166 2.73626 23 - -
22252 1.38629 1.38629 1.38629 1.38629
22253 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22254 24 2.86982 3.47591 0.13017 3.36931 24 - -
22255 1.38629 1.38629 1.38629 1.38629
22256 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22257 25 2.86982 3.47591 0.13017 3.36931 25 - -
22258 1.38629 1.38629 1.38629 1.38629
22259 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22260 26 3.30705 0.14631 3.36166 2.73626 26 - -
22261 1.38629 1.38629 1.38629 1.38629
22262 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22263 27 2.97980 2.52563 3.03204 0.19727 27 - -
22264 1.38629 1.38629 1.38629 1.38629
22265 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22266 28 3.30705 0.14631 3.36166 2.73626 28 - -
22267 1.38629 1.38629 1.38629 1.38629
22268 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22269 29 2.97980 2.52563 3.03204 0.19727 29 - -
22270 1.38629 1.38629 1.38629 1.38629
22271 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22272 30 2.97980 2.52563 3.03204 0.19727 30 - -
22273 1.38629 1.38629 1.38629 1.38629
22274 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22275 31 2.86982 3.47591 0.13017 3.36931 31 - -
22276 1.38629 1.38629 1.38629 1.38629
22277 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22278 32 3.30705 0.14631 3.36166 2.73626 32 - -
22279 1.38629 1.38629 1.38629 1.38629
22280 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22281 33 0.15719 3.27118 2.73043 3.16274 33 - -
22282 1.38629 1.38629 1.38629 1.38629
22283 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22284 34 2.97980 2.52563 3.03204 0.19727 34 - -
22285 1.38629 1.38629 1.38629 1.38629
22286 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22287 35 3.30705 0.14631 3.36166 2.73626 35 - -
22288 1.38629 1.38629 1.38629 1.38629
22289 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22290 36 0.15719 3.27118 2.73043 3.16274 36 - -
22291 1.38629 1.38629 1.38629 1.38629
22292 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22293 37 0.15719 3.27118 2.73043 3.16274 37 - -
22294 1.38629 1.38629 1.38629 1.38629
22295 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22296 38 2.97980 2.52563 3.03204 0.19727 38 - -
22297 1.38629 1.38629 1.38629 1.38629
22298 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22299 39 2.86982 3.47591 0.13017 3.36931 39 - -
22300 1.38629 1.38629 1.38629 1.38629
22301 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22302 40 0.15719 3.27118 2.73043 3.16274 40 - -
22303 1.38629 1.38629 1.38629 1.38629
22304 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22305 41 0.15719 3.27118 2.73043 3.16274 41 - -
22306 1.38629 1.38629 1.38629 1.38629
22307 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22308 42 2.86982 3.47591 0.13017 3.36931 42 - -
22309 1.38629 1.38629 1.38629 1.38629
22310 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22311 43 0.15719 3.27118 2.73043 3.16274 43 - -
22312 1.38629 1.38629 1.38629 1.38629
22313 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22314 44 0.15719 3.27118 2.73043 3.16274 44 - -
22315 1.38629 1.38629 1.38629 1.38629
22316 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22317 45 3.30705 0.14631 3.36166 2.73626 45 - -
22318 1.38629 1.38629 1.38629 1.38629
22319 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
22320 //
22321 HMMER3/b [3.0 | March 2010]
22322 NAME 2_5.8_Tracheophyta_58S_start_sevenj_long
22323 LENG 45
22324 ALPH DNA
22325 RF no
22326 CS no
22327 MAP yes
22328 DATE Fri Feb 17 15:58:24 2012
22329 NSEQ 4
22330 EFFN 3.230469
22331 CKSUM 1413873171
22332 STATS LOCAL MSV -8.0313 0.71932
22333 STATS LOCAL VITERBI -7.5228 0.71932
22334 STATS LOCAL FORWARD -4.0558 0.71932
22335 HMM A C G T
22336 m->m m->i m->d i->m i->i d->m d->d
22337 COMPO 1.40654 1.32503 1.38182 1.43510
22338 1.38629 1.38629 1.38629 1.38629
22339 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
22340 1 3.05845 2.57594 3.10775 0.18362 1 - -
22341 1.38629 1.38629 1.38629 1.38629
22342 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22343 2 2.92650 3.55724 0.12055 3.45877 2 - -
22344 1.38629 1.38629 1.38629 1.38629
22345 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22346 3 0.14592 3.35028 2.78241 3.24912 3 - -
22347 1.38629 1.38629 1.38629 1.38629
22348 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22349 4 3.39853 0.13441 3.44944 2.80375 4 - -
22350 1.38629 1.38629 1.38629 1.38629
22351 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22352 5 3.05845 2.57594 3.10775 0.18362 5 - -
22353 1.38629 1.38629 1.38629 1.38629
22354 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22355 6 3.39853 0.13441 3.44944 2.80375 6 - -
22356 1.38629 1.38629 1.38629 1.38629
22357 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22358 7 3.05845 2.57594 3.10775 0.18362 7 - -
22359 1.38629 1.38629 1.38629 1.38629
22360 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22361 8 3.39853 0.13441 3.44944 2.80375 8 - -
22362 1.38629 1.38629 1.38629 1.38629
22363 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22364 9 2.92650 3.55724 0.12055 3.45877 9 - -
22365 1.38629 1.38629 1.38629 1.38629
22366 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22367 10 2.92650 3.55724 0.12055 3.45877 10 - -
22368 1.38629 1.38629 1.38629 1.38629
22369 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22370 11 3.39853 0.13441 3.44944 2.80375 11 - -
22371 1.38629 1.38629 1.38629 1.38629
22372 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22373 12 0.14592 3.35028 2.78241 3.24912 12 - -
22374 1.38629 1.38629 1.38629 1.38629
22375 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22376 13 0.14592 3.35028 2.78241 3.24912 13 - -
22377 1.38629 1.38629 1.38629 1.38629
22378 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22379 14 3.39853 0.13441 3.44944 2.80375 14 - -
22380 1.38629 1.38629 1.38629 1.38629
22381 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22382 15 2.92650 3.55724 0.12055 3.45877 15 - -
22383 1.38629 1.38629 1.38629 1.38629
22384 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22385 16 2.92650 3.55724 0.12055 3.45877 16 - -
22386 1.38629 1.38629 1.38629 1.38629
22387 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22388 17 0.14592 3.35028 2.78241 3.24912 17 - -
22389 1.38629 1.38629 1.38629 1.38629
22390 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22391 18 3.05845 2.57594 3.10775 0.18362 18 - -
22392 1.38629 1.38629 1.38629 1.38629
22393 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22394 19 0.14592 3.35028 2.78241 3.24912 19 - -
22395 1.38629 1.38629 1.38629 1.38629
22396 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22397 20 3.05845 2.57594 3.10775 0.18362 20 - -
22398 1.38629 1.38629 1.38629 1.38629
22399 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22400 21 3.39853 0.13441 3.44944 2.80375 21 - -
22401 1.38629 1.38629 1.38629 1.38629
22402 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22403 22 3.05845 2.57594 3.10775 0.18362 22 - -
22404 1.38629 1.38629 1.38629 1.38629
22405 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22406 23 3.05845 2.57594 3.10775 0.18362 23 - -
22407 1.38629 1.38629 1.38629 1.38629
22408 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22409 24 2.92650 3.55724 0.12055 3.45877 24 - -
22410 1.38629 1.38629 1.38629 1.38629
22411 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22412 25 2.92650 3.55724 0.12055 3.45877 25 - -
22413 1.38629 1.38629 1.38629 1.38629
22414 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22415 26 3.39853 0.13441 3.44944 2.80375 26 - -
22416 1.38629 1.38629 1.38629 1.38629
22417 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22418 27 3.05845 2.57594 3.10775 0.18362 27 - -
22419 1.38629 1.38629 1.38629 1.38629
22420 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22421 28 3.39853 0.13441 3.44944 2.80375 28 - -
22422 1.38629 1.38629 1.38629 1.38629
22423 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22424 29 3.39853 0.13441 3.44944 2.80375 29 - -
22425 1.38629 1.38629 1.38629 1.38629
22426 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22427 30 3.39853 0.13441 3.44944 2.80375 30 - -
22428 1.38629 1.38629 1.38629 1.38629
22429 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22430 31 2.92650 3.55724 0.12055 3.45877 31 - -
22431 1.38629 1.38629 1.38629 1.38629
22432 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22433 32 3.05845 2.57594 3.10775 0.18362 32 - -
22434 1.38629 1.38629 1.38629 1.38629
22435 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22436 33 0.14592 3.35028 2.78241 3.24912 33 - -
22437 1.38629 1.38629 1.38629 1.38629
22438 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22439 34 3.05845 2.57594 3.10775 0.18362 34 - -
22440 1.38629 1.38629 1.38629 1.38629
22441 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22442 35 3.39853 0.13441 3.44944 2.80375 35 - -
22443 1.38629 1.38629 1.38629 1.38629
22444 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22445 36 2.92650 3.55724 0.12055 3.45877 36 - -
22446 1.38629 1.38629 1.38629 1.38629
22447 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22448 37 0.14592 3.35028 2.78241 3.24912 37 - -
22449 1.38629 1.38629 1.38629 1.38629
22450 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22451 38 3.05845 2.57594 3.10775 0.18362 38 - -
22452 1.38629 1.38629 1.38629 1.38629
22453 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22454 39 2.92650 3.55724 0.12055 3.45877 39 - -
22455 1.38629 1.38629 1.38629 1.38629
22456 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22457 40 0.14592 3.35028 2.78241 3.24912 40 - -
22458 1.38629 1.38629 1.38629 1.38629
22459 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22460 41 0.14592 3.35028 2.78241 3.24912 41 - -
22461 1.38629 1.38629 1.38629 1.38629
22462 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22463 42 2.92650 3.55724 0.12055 3.45877 42 - -
22464 1.38629 1.38629 1.38629 1.38629
22465 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22466 43 0.14592 3.35028 2.78241 3.24912 43 - -
22467 1.38629 1.38629 1.38629 1.38629
22468 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22469 44 0.14592 3.35028 2.78241 3.24912 44 - -
22470 1.38629 1.38629 1.38629 1.38629
22471 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
22472 45 3.39853 0.13441 3.44944 2.80375 45 - -
22473 1.38629 1.38629 1.38629 1.38629
22474 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
22475 //
22476 HMMER3/b [3.0 | March 2010]
22477 NAME 2_5.8_Tracheophyta_58S_start_sevenk_long
22478 LENG 45
22479 ALPH DNA
22480 RF no
22481 CS no
22482 MAP yes
22483 DATE Fri Feb 17 15:58:30 2012
22484 NSEQ 5
22485 EFFN 3.217773
22486 CKSUM 3068909412
22487 STATS LOCAL MSV -8.0273 0.71930
22488 STATS LOCAL VITERBI -7.4396 0.71930
22489 STATS LOCAL FORWARD -3.9665 0.71930
22490 HMM A C G T
22491 m->m m->i m->d i->m i->i d->m d->d
22492 COMPO 1.34043 1.32830 1.38034 1.50578
22493 1.38629 1.38629 1.38629 1.38629
22494 0.03761 3.99227 3.99227 1.46634 0.26236 0.00000 *
22495 1 3.05424 2.57325 3.10370 0.18432 1 - -
22496 1.38629 1.38629 1.38629 1.38629
22497 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22498 2 2.92353 3.55295 0.12104 3.45404 2 - -
22499 1.38629 1.38629 1.38629 1.38629
22500 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22501 3 0.14649 3.34608 2.77966 3.24453 3 - -
22502 1.38629 1.38629 1.38629 1.38629
22503 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22504 4 3.39368 0.13501 3.44479 2.80020 4 - -
22505 1.38629 1.38629 1.38629 1.38629
22506 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22507 5 3.05424 2.57325 3.10370 0.18432 5 - -
22508 1.38629 1.38629 1.38629 1.38629
22509 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22510 6 3.39368 0.13501 3.44479 2.80020 6 - -
22511 1.38629 1.38629 1.38629 1.38629
22512 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22513 7 3.05424 2.57325 3.10370 0.18432 7 - -
22514 1.38629 1.38629 1.38629 1.38629
22515 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22516 8 3.39368 0.13501 3.44479 2.80020 8 - -
22517 1.38629 1.38629 1.38629 1.38629
22518 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22519 9 2.92353 3.55295 0.12104 3.45404 9 - -
22520 1.38629 1.38629 1.38629 1.38629
22521 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22522 10 2.92353 3.55295 0.12104 3.45404 10 - -
22523 1.38629 1.38629 1.38629 1.38629
22524 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22525 11 3.39368 0.13501 3.44479 2.80020 11 - -
22526 1.38629 1.38629 1.38629 1.38629
22527 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22528 12 0.14649 3.34608 2.77966 3.24453 12 - -
22529 1.38629 1.38629 1.38629 1.38629
22530 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22531 13 0.14649 3.34608 2.77966 3.24453 13 - -
22532 1.38629 1.38629 1.38629 1.38629
22533 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22534 14 3.39368 0.13501 3.44479 2.80020 14 - -
22535 1.38629 1.38629 1.38629 1.38629
22536 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22537 15 2.92353 3.55295 0.12104 3.45404 15 - -
22538 1.38629 1.38629 1.38629 1.38629
22539 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22540 16 2.92353 3.55295 0.12104 3.45404 16 - -
22541 1.38629 1.38629 1.38629 1.38629
22542 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22543 17 0.14649 3.34608 2.77966 3.24453 17 - -
22544 1.38629 1.38629 1.38629 1.38629
22545 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22546 18 3.05424 2.57325 3.10370 0.18432 18 - -
22547 1.38629 1.38629 1.38629 1.38629
22548 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22549 19 0.14649 3.34608 2.77966 3.24453 19 - -
22550 1.38629 1.38629 1.38629 1.38629
22551 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22552 20 3.05424 2.57325 3.10370 0.18432 20 - -
22553 1.38629 1.38629 1.38629 1.38629
22554 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22555 21 3.39368 0.13501 3.44479 2.80020 21 - -
22556 1.38629 1.38629 1.38629 1.38629
22557 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22558 22 3.05424 2.57325 3.10370 0.18432 22 - -
22559 1.38629 1.38629 1.38629 1.38629
22560 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22561 23 0.14649 3.34608 2.77966 3.24453 23 - -
22562 1.38629 1.38629 1.38629 1.38629
22563 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22564 24 2.92353 3.55295 0.12104 3.45404 24 - -
22565 1.38629 1.38629 1.38629 1.38629
22566 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22567 25 2.92353 3.55295 0.12104 3.45404 25 - -
22568 1.38629 1.38629 1.38629 1.38629
22569 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22570 26 3.39368 0.13501 3.44479 2.80020 26 - -
22571 1.38629 1.38629 1.38629 1.38629
22572 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22573 27 3.05424 2.57325 3.10370 0.18432 27 - -
22574 1.38629 1.38629 1.38629 1.38629
22575 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22576 28 3.39368 0.13501 3.44479 2.80020 28 - -
22577 1.38629 1.38629 1.38629 1.38629
22578 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22579 29 3.05424 2.57325 3.10370 0.18432 29 - -
22580 1.38629 1.38629 1.38629 1.38629
22581 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22582 30 3.05424 2.57325 3.10370 0.18432 30 - -
22583 1.38629 1.38629 1.38629 1.38629
22584 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22585 31 2.92353 3.55295 0.12104 3.45404 31 - -
22586 1.38629 1.38629 1.38629 1.38629
22587 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22588 32 3.39368 0.13501 3.44479 2.80020 32 - -
22589 1.38629 1.38629 1.38629 1.38629
22590 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22591 33 3.39368 0.13501 3.44479 2.80020 33 - -
22592 1.38629 1.38629 1.38629 1.38629
22593 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22594 34 0.14649 3.34608 2.77966 3.24453 34 - -
22595 1.38629 1.38629 1.38629 1.38629
22596 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22597 35 3.39368 0.13501 3.44479 2.80020 35 - -
22598 1.38629 1.38629 1.38629 1.38629
22599 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22600 36 2.92353 3.55295 0.12104 3.45404 36 - -
22601 1.38629 1.38629 1.38629 1.38629
22602 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22603 37 0.14649 3.34608 2.77966 3.24453 37 - -
22604 1.38629 1.38629 1.38629 1.38629
22605 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22606 38 3.05424 2.57325 3.10370 0.18432 38 - -
22607 1.38629 1.38629 1.38629 1.38629
22608 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22609 39 2.92353 3.55295 0.12104 3.45404 39 - -
22610 1.38629 1.38629 1.38629 1.38629
22611 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22612 40 0.14649 3.34608 2.77966 3.24453 40 - -
22613 1.38629 1.38629 1.38629 1.38629
22614 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22615 41 0.14649 3.34608 2.77966 3.24453 41 - -
22616 1.38629 1.38629 1.38629 1.38629
22617 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22618 42 2.92353 3.55295 0.12104 3.45404 42 - -
22619 1.38629 1.38629 1.38629 1.38629
22620 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22621 43 0.14649 3.34608 2.77966 3.24453 43 - -
22622 1.38629 1.38629 1.38629 1.38629
22623 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22624 44 0.14649 3.34608 2.77966 3.24453 44 - -
22625 1.38629 1.38629 1.38629 1.38629
22626 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
22627 45 3.39368 0.13501 3.44479 2.80020 45 - -
22628 1.38629 1.38629 1.38629 1.38629
22629 0.01898 3.97364 * 1.46634 0.26236 0.00000 *
22630 //
22631 HMMER3/b [3.0 | March 2010]
22632 NAME 2_5.8_Tracheophyta_58S_start_sevenl_long
22633 LENG 45
22634 ALPH DNA
22635 RF no
22636 CS no
22637 MAP yes
22638 DATE Fri Feb 17 15:58:36 2012
22639 NSEQ 6
22640 EFFN 3.260742
22641 CKSUM 1522618069
22642 STATS LOCAL MSV -7.9109 0.71931
22643 STATS LOCAL VITERBI -7.6232 0.71931
22644 STATS LOCAL FORWARD -4.3580 0.71931
22645 HMM A C G T
22646 m->m m->i m->d i->m i->i d->m d->d
22647 COMPO 1.33594 1.46037 1.37844 1.37450
22648 1.38629 1.38629 1.38629 1.38629
22649 0.03731 4.00017 4.00017 1.46634 0.26236 0.00000 *
22650 1 0.14457 3.36023 2.78889 3.26000 1 - -
22651 1.38629 1.38629 1.38629 1.38629
22652 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22653 2 2.93350 3.56738 0.11941 3.46995 2 - -
22654 1.38629 1.38629 1.38629 1.38629
22655 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22656 3 0.14457 3.36023 2.78889 3.26000 3 - -
22657 1.38629 1.38629 1.38629 1.38629
22658 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22659 4 3.41001 0.13300 3.46044 2.81215 4 - -
22660 1.38629 1.38629 1.38629 1.38629
22661 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22662 5 3.06843 2.58230 3.11735 0.18196 5 - -
22663 1.38629 1.38629 1.38629 1.38629
22664 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22665 6 3.41001 0.13300 3.46044 2.81215 6 - -
22666 1.38629 1.38629 1.38629 1.38629
22667 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22668 7 3.06843 2.58230 3.11735 0.18196 7 - -
22669 1.38629 1.38629 1.38629 1.38629
22670 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22671 8 3.06843 2.58230 3.11735 0.18196 8 - -
22672 1.38629 1.38629 1.38629 1.38629
22673 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22674 9 2.93350 3.56738 0.11941 3.46995 9 - -
22675 1.38629 1.38629 1.38629 1.38629
22676 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22677 10 2.93350 3.56738 0.11941 3.46995 10 - -
22678 1.38629 1.38629 1.38629 1.38629
22679 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22680 11 3.41001 0.13300 3.46044 2.81215 11 - -
22681 1.38629 1.38629 1.38629 1.38629
22682 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22683 12 0.14457 3.36023 2.78889 3.26000 12 - -
22684 1.38629 1.38629 1.38629 1.38629
22685 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22686 13 0.14457 3.36023 2.78889 3.26000 13 - -
22687 1.38629 1.38629 1.38629 1.38629
22688 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22689 14 3.06843 2.58230 3.11735 0.18196 14 - -
22690 1.38629 1.38629 1.38629 1.38629
22691 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22692 15 2.93350 3.56738 0.11941 3.46995 15 - -
22693 1.38629 1.38629 1.38629 1.38629
22694 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22695 16 2.93350 3.56738 0.11941 3.46995 16 - -
22696 1.38629 1.38629 1.38629 1.38629
22697 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22698 17 0.14457 3.36023 2.78889 3.26000 17 - -
22699 1.38629 1.38629 1.38629 1.38629
22700 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22701 18 3.06843 2.58230 3.11735 0.18196 18 - -
22702 1.38629 1.38629 1.38629 1.38629
22703 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22704 19 0.14457 3.36023 2.78889 3.26000 19 - -
22705 1.38629 1.38629 1.38629 1.38629
22706 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22707 20 3.06843 2.58230 3.11735 0.18196 20 - -
22708 1.38629 1.38629 1.38629 1.38629
22709 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22710 21 3.41001 0.13300 3.46044 2.81215 21 - -
22711 1.38629 1.38629 1.38629 1.38629
22712 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22713 22 3.06843 2.58230 3.11735 0.18196 22 - -
22714 1.38629 1.38629 1.38629 1.38629
22715 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22716 23 3.41001 0.13300 3.46044 2.81215 23 - -
22717 1.38629 1.38629 1.38629 1.38629
22718 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22719 24 2.93350 3.56738 0.11941 3.46995 24 - -
22720 1.38629 1.38629 1.38629 1.38629
22721 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22722 25 2.93350 3.56738 0.11941 3.46995 25 - -
22723 1.38629 1.38629 1.38629 1.38629
22724 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22725 26 3.41001 0.13300 3.46044 2.81215 26 - -
22726 1.38629 1.38629 1.38629 1.38629
22727 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22728 27 3.06843 2.58230 3.11735 0.18196 27 - -
22729 1.38629 1.38629 1.38629 1.38629
22730 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22731 28 3.41001 0.13300 3.46044 2.81215 28 - -
22732 1.38629 1.38629 1.38629 1.38629
22733 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22734 29 3.06843 2.58230 3.11735 0.18196 29 - -
22735 1.38629 1.38629 1.38629 1.38629
22736 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22737 30 3.06843 2.58230 3.11735 0.18196 30 - -
22738 1.38629 1.38629 1.38629 1.38629
22739 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22740 31 2.93350 3.56738 0.11941 3.46995 31 - -
22741 1.38629 1.38629 1.38629 1.38629
22742 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22743 32 3.41001 0.13300 3.46044 2.81215 32 - -
22744 1.38629 1.38629 1.38629 1.38629
22745 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22746 33 0.14457 3.36023 2.78889 3.26000 33 - -
22747 1.38629 1.38629 1.38629 1.38629
22748 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22749 34 3.06843 2.58230 3.11735 0.18196 34 - -
22750 1.38629 1.38629 1.38629 1.38629
22751 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22752 35 3.41001 0.13300 3.46044 2.81215 35 - -
22753 1.38629 1.38629 1.38629 1.38629
22754 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22755 36 2.93350 3.56738 0.11941 3.46995 36 - -
22756 1.38629 1.38629 1.38629 1.38629
22757 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22758 37 0.14457 3.36023 2.78889 3.26000 37 - -
22759 1.38629 1.38629 1.38629 1.38629
22760 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22761 38 3.06843 2.58230 3.11735 0.18196 38 - -
22762 1.38629 1.38629 1.38629 1.38629
22763 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22764 39 2.93350 3.56738 0.11941 3.46995 39 - -
22765 1.38629 1.38629 1.38629 1.38629
22766 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22767 40 0.14457 3.36023 2.78889 3.26000 40 - -
22768 1.38629 1.38629 1.38629 1.38629
22769 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22770 41 0.14457 3.36023 2.78889 3.26000 41 - -
22771 1.38629 1.38629 1.38629 1.38629
22772 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22773 42 2.93350 3.56738 0.11941 3.46995 42 - -
22774 1.38629 1.38629 1.38629 1.38629
22775 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22776 43 0.14457 3.36023 2.78889 3.26000 43 - -
22777 1.38629 1.38629 1.38629 1.38629
22778 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22779 44 0.14457 3.36023 2.78889 3.26000 44 - -
22780 1.38629 1.38629 1.38629 1.38629
22781 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
22782 45 3.41001 0.13300 3.46044 2.81215 45 - -
22783 1.38629 1.38629 1.38629 1.38629
22784 0.01883 3.98169 * 1.46634 0.26236 0.00000 *
22785 //
22786 HMMER3/b [3.0 | March 2010]
22787 NAME 2_5.8_Tracheophyta_58S_start_sevenm_long
22788 LENG 45
22789 ALPH DNA
22790 RF no
22791 CS no
22792 MAP yes
22793 DATE Fri Feb 17 15:58:41 2012
22794 NSEQ 3
22795 EFFN 3.000000
22796 CKSUM 3456743413
22797 STATS LOCAL MSV -7.9235 0.72006
22798 STATS LOCAL VITERBI -7.5962 0.72006
22799 STATS LOCAL FORWARD -3.5311 0.72006
22800 HMM A C G T
22801 m->m m->i m->d i->m i->i d->m d->d
22802 COMPO 1.28260 1.21341 1.44975 1.65613
22803 1.38629 1.38629 1.38629 1.38629
22804 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22805 1 3.30705 0.14631 3.36166 2.73626 1 - -
22806 1.38629 1.38629 1.38629 1.38629
22807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22808 2 2.86982 3.47591 0.13017 3.36931 2 - -
22809 1.38629 1.38629 1.38629 1.38629
22810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22811 3 0.15719 3.27118 2.73043 3.16274 3 - -
22812 1.38629 1.38629 1.38629 1.38629
22813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22814 4 3.30705 0.14631 3.36166 2.73626 4 - -
22815 1.38629 1.38629 1.38629 1.38629
22816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22817 5 2.97980 2.52563 3.03204 0.19727 5 - -
22818 1.38629 1.38629 1.38629 1.38629
22819 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22820 6 3.30705 0.14631 3.36166 2.73626 6 - -
22821 1.38629 1.38629 1.38629 1.38629
22822 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22823 7 2.97980 2.52563 3.03204 0.19727 7 - -
22824 1.38629 1.38629 1.38629 1.38629
22825 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22826 8 3.30705 0.14631 3.36166 2.73626 8 - -
22827 1.38629 1.38629 1.38629 1.38629
22828 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22829 9 2.86982 3.47591 0.13017 3.36931 9 - -
22830 1.38629 1.38629 1.38629 1.38629
22831 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22832 10 0.15719 3.27118 2.73043 3.16274 10 - -
22833 1.38629 1.38629 1.38629 1.38629
22834 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22835 11 3.30705 0.14631 3.36166 2.73626 11 - -
22836 1.38629 1.38629 1.38629 1.38629
22837 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22838 12 0.15719 3.27118 2.73043 3.16274 12 - -
22839 1.38629 1.38629 1.38629 1.38629
22840 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22841 13 0.15719 3.27118 2.73043 3.16274 13 - -
22842 1.38629 1.38629 1.38629 1.38629
22843 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22844 14 3.30705 0.14631 3.36166 2.73626 14 - -
22845 1.38629 1.38629 1.38629 1.38629
22846 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22847 15 2.86982 3.47591 0.13017 3.36931 15 - -
22848 1.38629 1.38629 1.38629 1.38629
22849 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22850 16 2.86982 3.47591 0.13017 3.36931 16 - -
22851 1.38629 1.38629 1.38629 1.38629
22852 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22853 17 0.15719 3.27118 2.73043 3.16274 17 - -
22854 1.38629 1.38629 1.38629 1.38629
22855 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22856 18 2.97980 2.52563 3.03204 0.19727 18 - -
22857 1.38629 1.38629 1.38629 1.38629
22858 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22859 19 0.15719 3.27118 2.73043 3.16274 19 - -
22860 1.38629 1.38629 1.38629 1.38629
22861 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22862 20 2.97980 2.52563 3.03204 0.19727 20 - -
22863 1.38629 1.38629 1.38629 1.38629
22864 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22865 21 3.30705 0.14631 3.36166 2.73626 21 - -
22866 1.38629 1.38629 1.38629 1.38629
22867 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22868 22 2.97980 2.52563 3.03204 0.19727 22 - -
22869 1.38629 1.38629 1.38629 1.38629
22870 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22871 23 2.97980 2.52563 3.03204 0.19727 23 - -
22872 1.38629 1.38629 1.38629 1.38629
22873 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22874 24 2.86982 3.47591 0.13017 3.36931 24 - -
22875 1.38629 1.38629 1.38629 1.38629
22876 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22877 25 2.86982 3.47591 0.13017 3.36931 25 - -
22878 1.38629 1.38629 1.38629 1.38629
22879 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22880 26 3.30705 0.14631 3.36166 2.73626 26 - -
22881 1.38629 1.38629 1.38629 1.38629
22882 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22883 27 3.30705 0.14631 3.36166 2.73626 27 - -
22884 1.38629 1.38629 1.38629 1.38629
22885 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22886 28 3.30705 0.14631 3.36166 2.73626 28 - -
22887 1.38629 1.38629 1.38629 1.38629
22888 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22889 29 0.15719 3.27118 2.73043 3.16274 29 - -
22890 1.38629 1.38629 1.38629 1.38629
22891 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22892 30 3.30705 0.14631 3.36166 2.73626 30 - -
22893 1.38629 1.38629 1.38629 1.38629
22894 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22895 31 2.86982 3.47591 0.13017 3.36931 31 - -
22896 1.38629 1.38629 1.38629 1.38629
22897 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22898 32 3.30705 0.14631 3.36166 2.73626 32 - -
22899 1.38629 1.38629 1.38629 1.38629
22900 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22901 33 0.15719 3.27118 2.73043 3.16274 33 - -
22902 1.38629 1.38629 1.38629 1.38629
22903 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22904 34 2.97980 2.52563 3.03204 0.19727 34 - -
22905 1.38629 1.38629 1.38629 1.38629
22906 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22907 35 3.30705 0.14631 3.36166 2.73626 35 - -
22908 1.38629 1.38629 1.38629 1.38629
22909 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22910 36 2.86982 3.47591 0.13017 3.36931 36 - -
22911 1.38629 1.38629 1.38629 1.38629
22912 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22913 37 0.15719 3.27118 2.73043 3.16274 37 - -
22914 1.38629 1.38629 1.38629 1.38629
22915 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22916 38 2.97980 2.52563 3.03204 0.19727 38 - -
22917 1.38629 1.38629 1.38629 1.38629
22918 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22919 39 2.86982 3.47591 0.13017 3.36931 39 - -
22920 1.38629 1.38629 1.38629 1.38629
22921 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22922 40 0.15719 3.27118 2.73043 3.16274 40 - -
22923 1.38629 1.38629 1.38629 1.38629
22924 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22925 41 0.15719 3.27118 2.73043 3.16274 41 - -
22926 1.38629 1.38629 1.38629 1.38629
22927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22928 42 2.86982 3.47591 0.13017 3.36931 42 - -
22929 1.38629 1.38629 1.38629 1.38629
22930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22931 43 0.15719 3.27118 2.73043 3.16274 43 - -
22932 1.38629 1.38629 1.38629 1.38629
22933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22934 44 0.15719 3.27118 2.73043 3.16274 44 - -
22935 1.38629 1.38629 1.38629 1.38629
22936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22937 45 3.30705 0.14631 3.36166 2.73626 45 - -
22938 1.38629 1.38629 1.38629 1.38629
22939 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
22940 //
22941 HMMER3/b [3.0 | March 2010]
22942 NAME 2_5.8_Tracheophyta_58S_start_sevenn_long
22943 LENG 45
22944 ALPH DNA
22945 RF no
22946 CS no
22947 MAP yes
22948 DATE Fri Feb 17 15:58:46 2012
22949 NSEQ 3
22950 EFFN 3.000000
22951 CKSUM 239138404
22952 STATS LOCAL MSV -7.8873 0.72025
22953 STATS LOCAL VITERBI -7.6451 0.72025
22954 STATS LOCAL FORWARD -3.8332 0.72025
22955 HMM A C G T
22956 m->m m->i m->d i->m i->i d->m d->d
22957 COMPO 1.40577 1.32699 1.38047 1.43511
22958 1.38629 1.38629 1.38629 1.38629
22959 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
22960 1 2.97980 2.52563 3.03204 0.19727 1 - -
22961 1.38629 1.38629 1.38629 1.38629
22962 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22963 2 2.86982 3.47591 0.13017 3.36931 2 - -
22964 1.38629 1.38629 1.38629 1.38629
22965 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22966 3 0.15719 3.27118 2.73043 3.16274 3 - -
22967 1.38629 1.38629 1.38629 1.38629
22968 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22969 4 3.30705 0.14631 3.36166 2.73626 4 - -
22970 1.38629 1.38629 1.38629 1.38629
22971 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22972 5 2.97980 2.52563 3.03204 0.19727 5 - -
22973 1.38629 1.38629 1.38629 1.38629
22974 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22975 6 3.30705 0.14631 3.36166 2.73626 6 - -
22976 1.38629 1.38629 1.38629 1.38629
22977 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22978 7 2.97980 2.52563 3.03204 0.19727 7 - -
22979 1.38629 1.38629 1.38629 1.38629
22980 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22981 8 3.30705 0.14631 3.36166 2.73626 8 - -
22982 1.38629 1.38629 1.38629 1.38629
22983 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22984 9 2.86982 3.47591 0.13017 3.36931 9 - -
22985 1.38629 1.38629 1.38629 1.38629
22986 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22987 10 2.86982 3.47591 0.13017 3.36931 10 - -
22988 1.38629 1.38629 1.38629 1.38629
22989 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22990 11 3.30705 0.14631 3.36166 2.73626 11 - -
22991 1.38629 1.38629 1.38629 1.38629
22992 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22993 12 0.15719 3.27118 2.73043 3.16274 12 - -
22994 1.38629 1.38629 1.38629 1.38629
22995 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22996 13 0.15719 3.27118 2.73043 3.16274 13 - -
22997 1.38629 1.38629 1.38629 1.38629
22998 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
22999 14 3.30705 0.14631 3.36166 2.73626 14 - -
23000 1.38629 1.38629 1.38629 1.38629
23001 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23002 15 2.86982 3.47591 0.13017 3.36931 15 - -
23003 1.38629 1.38629 1.38629 1.38629
23004 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23005 16 2.86982 3.47591 0.13017 3.36931 16 - -
23006 1.38629 1.38629 1.38629 1.38629
23007 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23008 17 0.15719 3.27118 2.73043 3.16274 17 - -
23009 1.38629 1.38629 1.38629 1.38629
23010 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23011 18 2.97980 2.52563 3.03204 0.19727 18 - -
23012 1.38629 1.38629 1.38629 1.38629
23013 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23014 19 0.15719 3.27118 2.73043 3.16274 19 - -
23015 1.38629 1.38629 1.38629 1.38629
23016 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23017 20 2.97980 2.52563 3.03204 0.19727 20 - -
23018 1.38629 1.38629 1.38629 1.38629
23019 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23020 21 3.30705 0.14631 3.36166 2.73626 21 - -
23021 1.38629 1.38629 1.38629 1.38629
23022 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23023 22 2.97980 2.52563 3.03204 0.19727 22 - -
23024 1.38629 1.38629 1.38629 1.38629
23025 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23026 23 2.97980 2.52563 3.03204 0.19727 23 - -
23027 1.38629 1.38629 1.38629 1.38629
23028 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23029 24 2.86982 3.47591 0.13017 3.36931 24 - -
23030 1.38629 1.38629 1.38629 1.38629
23031 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23032 25 2.86982 3.47591 0.13017 3.36931 25 - -
23033 1.38629 1.38629 1.38629 1.38629
23034 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23035 26 2.97980 2.52563 3.03204 0.19727 26 - -
23036 1.38629 1.38629 1.38629 1.38629
23037 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23038 27 3.30705 0.14631 3.36166 2.73626 27 - -
23039 1.38629 1.38629 1.38629 1.38629
23040 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23041 28 3.30705 0.14631 3.36166 2.73626 28 - -
23042 1.38629 1.38629 1.38629 1.38629
23043 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23044 29 2.97980 2.52563 3.03204 0.19727 29 - -
23045 1.38629 1.38629 1.38629 1.38629
23046 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23047 30 3.30705 0.14631 3.36166 2.73626 30 - -
23048 1.38629 1.38629 1.38629 1.38629
23049 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23050 31 2.86982 3.47591 0.13017 3.36931 31 - -
23051 1.38629 1.38629 1.38629 1.38629
23052 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23053 32 3.30705 0.14631 3.36166 2.73626 32 - -
23054 1.38629 1.38629 1.38629 1.38629
23055 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23056 33 0.15719 3.27118 2.73043 3.16274 33 - -
23057 1.38629 1.38629 1.38629 1.38629
23058 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23059 34 2.97980 2.52563 3.03204 0.19727 34 - -
23060 1.38629 1.38629 1.38629 1.38629
23061 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23062 35 3.30705 0.14631 3.36166 2.73626 35 - -
23063 1.38629 1.38629 1.38629 1.38629
23064 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23065 36 2.86982 3.47591 0.13017 3.36931 36 - -
23066 1.38629 1.38629 1.38629 1.38629
23067 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23068 37 0.15719 3.27118 2.73043 3.16274 37 - -
23069 1.38629 1.38629 1.38629 1.38629
23070 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23071 38 2.97980 2.52563 3.03204 0.19727 38 - -
23072 1.38629 1.38629 1.38629 1.38629
23073 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23074 39 2.86982 3.47591 0.13017 3.36931 39 - -
23075 1.38629 1.38629 1.38629 1.38629
23076 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23077 40 0.15719 3.27118 2.73043 3.16274 40 - -
23078 1.38629 1.38629 1.38629 1.38629
23079 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23080 41 0.15719 3.27118 2.73043 3.16274 41 - -
23081 1.38629 1.38629 1.38629 1.38629
23082 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23083 42 2.86982 3.47591 0.13017 3.36931 42 - -
23084 1.38629 1.38629 1.38629 1.38629
23085 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23086 43 0.15719 3.27118 2.73043 3.16274 43 - -
23087 1.38629 1.38629 1.38629 1.38629
23088 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23089 44 0.15719 3.27118 2.73043 3.16274 44 - -
23090 1.38629 1.38629 1.38629 1.38629
23091 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
23092 45 3.30705 0.14631 3.36166 2.73626 45 - -
23093 1.38629 1.38629 1.38629 1.38629
23094 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
23095 //
23096 HMMER3/b [3.0 | March 2010]
23097 NAME 2_5.8_Tracheophyta_58S_start_seveno_long
23098 LENG 45
23099 ALPH DNA
23100 RF no
23101 CS no
23102 MAP yes
23103 DATE Fri Feb 17 15:58:53 2012
23104 NSEQ 25
23105 EFFN 3.305054
23106 CKSUM 615057231
23107 STATS LOCAL MSV -8.1082 0.71933
23108 STATS LOCAL VITERBI -7.6429 0.71933
23109 STATS LOCAL FORWARD -3.7763 0.71933
23110 HMM A C G T
23111 m->m m->i m->d i->m i->i d->m d->d
23112 COMPO 1.36993 1.20241 1.43339 1.57550
23113 1.38629 1.38629 1.38629 1.38629
23114 0.03701 4.00825 4.00825 1.46634 0.26236 0.00000 *
23115 1 3.42658 0.13099 3.47632 2.82425 1 - -
23116 1.38629 1.38629 1.38629 1.38629
23117 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23118 2 2.94358 3.58201 0.11779 3.48608 2 - -
23119 1.38629 1.38629 1.38629 1.38629
23120 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23121 3 0.14264 3.37460 2.79825 3.27573 3 - -
23122 1.38629 1.38629 1.38629 1.38629
23123 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23124 4 3.42658 0.13099 3.47632 2.82425 4 - -
23125 1.38629 1.38629 1.38629 1.38629
23126 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23127 5 3.08290 2.59151 3.13127 0.17960 5 - -
23128 1.38629 1.38629 1.38629 1.38629
23129 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23130 6 3.42658 0.13099 3.47632 2.82425 6 - -
23131 1.38629 1.38629 1.38629 1.38629
23132 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23133 7 3.08290 2.59151 3.13127 0.17960 7 - -
23134 1.38629 1.38629 1.38629 1.38629
23135 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23136 8 3.42658 0.13099 3.47632 2.82425 8 - -
23137 1.38629 1.38629 1.38629 1.38629
23138 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23139 9 2.94358 3.58201 0.11779 3.48608 9 - -
23140 1.38629 1.38629 1.38629 1.38629
23141 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23142 10 0.64013 2.55391 1.18659 2.41084 10 - -
23143 1.38629 1.38629 1.38629 1.38629
23144 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23145 11 3.42658 0.13099 3.47632 2.82425 11 - -
23146 1.38629 1.38629 1.38629 1.38629
23147 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23148 12 0.14264 3.37460 2.79825 3.27573 12 - -
23149 1.38629 1.38629 1.38629 1.38629
23150 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23151 13 0.14264 3.37460 2.79825 3.27573 13 - -
23152 1.38629 1.38629 1.38629 1.38629
23153 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23154 14 3.42658 0.13099 3.47632 2.82425 14 - -
23155 1.38629 1.38629 1.38629 1.38629
23156 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23157 15 2.94358 3.58201 0.11779 3.48608 15 - -
23158 1.38629 1.38629 1.38629 1.38629
23159 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23160 16 2.94358 3.58201 0.11779 3.48608 16 - -
23161 1.38629 1.38629 1.38629 1.38629
23162 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23163 17 0.14264 3.37460 2.79825 3.27573 17 - -
23164 1.38629 1.38629 1.38629 1.38629
23165 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23166 18 3.08290 2.59151 3.13127 0.17960 18 - -
23167 1.38629 1.38629 1.38629 1.38629
23168 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23169 19 0.14264 3.37460 2.79825 3.27573 19 - -
23170 1.38629 1.38629 1.38629 1.38629
23171 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23172 20 3.08290 2.59151 3.13127 0.17960 20 - -
23173 1.38629 1.38629 1.38629 1.38629
23174 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23175 21 3.42658 0.13099 3.47632 2.82425 21 - -
23176 1.38629 1.38629 1.38629 1.38629
23177 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23178 22 3.08290 2.59151 3.13127 0.17960 22 - -
23179 1.38629 1.38629 1.38629 1.38629
23180 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23181 23 3.42658 0.13099 3.47632 2.82425 23 - -
23182 1.38629 1.38629 1.38629 1.38629
23183 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23184 24 2.94358 3.58201 0.11779 3.48608 24 - -
23185 1.38629 1.38629 1.38629 1.38629
23186 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23187 25 2.94358 3.58201 0.11779 3.48608 25 - -
23188 1.38629 1.38629 1.38629 1.38629
23189 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23190 26 3.42658 0.13099 3.47632 2.82425 26 - -
23191 1.38629 1.38629 1.38629 1.38629
23192 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23193 27 3.08290 2.59151 3.13127 0.17960 27 - -
23194 1.38629 1.38629 1.38629 1.38629
23195 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23196 28 3.42658 0.13099 3.47632 2.82425 28 - -
23197 1.38629 1.38629 1.38629 1.38629
23198 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23199 29 3.08290 2.59151 3.13127 0.17960 29 - -
23200 1.38629 1.38629 1.38629 1.38629
23201 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23202 30 3.42658 0.13099 3.47632 2.82425 30 - -
23203 1.38629 1.38629 1.38629 1.38629
23204 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23205 31 2.94358 3.58201 0.11779 3.48608 31 - -
23206 1.38629 1.38629 1.38629 1.38629
23207 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23208 32 3.42658 0.13099 3.47632 2.82425 32 - -
23209 1.38629 1.38629 1.38629 1.38629
23210 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23211 33 0.14264 3.37460 2.79825 3.27573 33 - -
23212 1.38629 1.38629 1.38629 1.38629
23213 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23214 34 3.08290 2.59151 3.13127 0.17960 34 - -
23215 1.38629 1.38629 1.38629 1.38629
23216 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23217 35 3.42658 0.13099 3.47632 2.82425 35 - -
23218 1.38629 1.38629 1.38629 1.38629
23219 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23220 36 2.94358 3.58201 0.11779 3.48608 36 - -
23221 1.38629 1.38629 1.38629 1.38629
23222 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23223 37 0.14264 3.37460 2.79825 3.27573 37 - -
23224 1.38629 1.38629 1.38629 1.38629
23225 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23226 38 3.08290 2.59151 3.13127 0.17960 38 - -
23227 1.38629 1.38629 1.38629 1.38629
23228 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23229 39 2.94358 3.58201 0.11779 3.48608 39 - -
23230 1.38629 1.38629 1.38629 1.38629
23231 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23232 40 0.14264 3.37460 2.79825 3.27573 40 - -
23233 1.38629 1.38629 1.38629 1.38629
23234 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23235 41 0.14264 3.37460 2.79825 3.27573 41 - -
23236 1.38629 1.38629 1.38629 1.38629
23237 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23238 42 2.94358 3.58201 0.11779 3.48608 42 - -
23239 1.38629 1.38629 1.38629 1.38629
23240 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23241 43 0.14264 3.37460 2.79825 3.27573 43 - -
23242 1.38629 1.38629 1.38629 1.38629
23243 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23244 44 0.14264 3.37460 2.79825 3.27573 44 - -
23245 1.38629 1.38629 1.38629 1.38629
23246 0.03701 4.00825 4.00825 1.46634 0.26236 1.09861 0.40547
23247 45 3.42658 0.13099 3.47632 2.82425 45 - -
23248 1.38629 1.38629 1.38629 1.38629
23249 0.01867 3.98992 * 1.46634 0.26236 0.00000 *
23250 //
23251 HMMER3/b [3.0 | March 2010]
23252 NAME 2_5.8_Tracheophyta_58S_start_sevenp_long
23253 LENG 45
23254 ALPH DNA
23255 RF no
23256 CS no
23257 MAP yes
23258 DATE Fri Feb 17 15:58:57 2012
23259 NSEQ 4
23260 EFFN 3.191406
23261 CKSUM 3224455691
23262 STATS LOCAL MSV -8.0922 0.71932
23263 STATS LOCAL VITERBI -7.4985 0.71932
23264 STATS LOCAL FORWARD -3.9868 0.71932
23265 HMM A C G T
23266 m->m m->i m->d i->m i->i d->m d->d
23267 COMPO 1.34156 1.26862 1.38126 1.57949
23268 1.38629 1.38629 1.38629 1.38629
23269 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 *
23270 1 3.04545 2.56765 3.09524 0.18579 1 - -
23271 1.38629 1.38629 1.38629 1.38629
23272 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23273 2 2.91732 3.54398 0.12206 3.44415 2 - -
23274 1.38629 1.38629 1.38629 1.38629
23275 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23276 3 0.14770 3.33730 2.77393 3.23493 3 - -
23277 1.38629 1.38629 1.38629 1.38629
23278 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23279 4 3.38354 0.13628 3.43507 2.79277 4 - -
23280 1.38629 1.38629 1.38629 1.38629
23281 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23282 5 3.04545 2.56765 3.09524 0.18579 5 - -
23283 1.38629 1.38629 1.38629 1.38629
23284 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23285 6 3.38354 0.13628 3.43507 2.79277 6 - -
23286 1.38629 1.38629 1.38629 1.38629
23287 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23288 7 3.38354 0.13628 3.43507 2.79277 7 - -
23289 1.38629 1.38629 1.38629 1.38629
23290 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23291 8 3.38354 0.13628 3.43507 2.79277 8 - -
23292 1.38629 1.38629 1.38629 1.38629
23293 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23294 9 2.91732 3.54398 0.12206 3.44415 9 - -
23295 1.38629 1.38629 1.38629 1.38629
23296 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23297 10 2.91732 3.54398 0.12206 3.44415 10 - -
23298 1.38629 1.38629 1.38629 1.38629
23299 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23300 11 3.38354 0.13628 3.43507 2.79277 11 - -
23301 1.38629 1.38629 1.38629 1.38629
23302 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23303 12 0.14770 3.33730 2.77393 3.23493 12 - -
23304 1.38629 1.38629 1.38629 1.38629
23305 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23306 13 0.14770 3.33730 2.77393 3.23493 13 - -
23307 1.38629 1.38629 1.38629 1.38629
23308 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23309 14 3.38354 0.13628 3.43507 2.79277 14 - -
23310 1.38629 1.38629 1.38629 1.38629
23311 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23312 15 2.91732 3.54398 0.12206 3.44415 15 - -
23313 1.38629 1.38629 1.38629 1.38629
23314 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23315 16 2.91732 3.54398 0.12206 3.44415 16 - -
23316 1.38629 1.38629 1.38629 1.38629
23317 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23318 17 0.14770 3.33730 2.77393 3.23493 17 - -
23319 1.38629 1.38629 1.38629 1.38629
23320 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23321 18 3.04545 2.56765 3.09524 0.18579 18 - -
23322 1.38629 1.38629 1.38629 1.38629
23323 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23324 19 0.14770 3.33730 2.77393 3.23493 19 - -
23325 1.38629 1.38629 1.38629 1.38629
23326 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23327 20 3.04545 2.56765 3.09524 0.18579 20 - -
23328 1.38629 1.38629 1.38629 1.38629
23329 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23330 21 3.38354 0.13628 3.43507 2.79277 21 - -
23331 1.38629 1.38629 1.38629 1.38629
23332 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23333 22 3.04545 2.56765 3.09524 0.18579 22 - -
23334 1.38629 1.38629 1.38629 1.38629
23335 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23336 23 0.14770 3.33730 2.77393 3.23493 23 - -
23337 1.38629 1.38629 1.38629 1.38629
23338 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23339 24 2.91732 3.54398 0.12206 3.44415 24 - -
23340 1.38629 1.38629 1.38629 1.38629
23341 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23342 25 2.91732 3.54398 0.12206 3.44415 25 - -
23343 1.38629 1.38629 1.38629 1.38629
23344 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23345 26 3.38354 0.13628 3.43507 2.79277 26 - -
23346 1.38629 1.38629 1.38629 1.38629
23347 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23348 27 3.04545 2.56765 3.09524 0.18579 27 - -
23349 1.38629 1.38629 1.38629 1.38629
23350 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23351 28 3.38354 0.13628 3.43507 2.79277 28 - -
23352 1.38629 1.38629 1.38629 1.38629
23353 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23354 29 3.04545 2.56765 3.09524 0.18579 29 - -
23355 1.38629 1.38629 1.38629 1.38629
23356 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23357 30 3.38354 0.13628 3.43507 2.79277 30 - -
23358 1.38629 1.38629 1.38629 1.38629
23359 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23360 31 2.91732 3.54398 0.12206 3.44415 31 - -
23361 1.38629 1.38629 1.38629 1.38629
23362 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23363 32 3.38354 0.13628 3.43507 2.79277 32 - -
23364 1.38629 1.38629 1.38629 1.38629
23365 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23366 33 0.14770 3.33730 2.77393 3.23493 33 - -
23367 1.38629 1.38629 1.38629 1.38629
23368 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23369 34 3.04545 2.56765 3.09524 0.18579 34 - -
23370 1.38629 1.38629 1.38629 1.38629
23371 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23372 35 3.38354 0.13628 3.43507 2.79277 35 - -
23373 1.38629 1.38629 1.38629 1.38629
23374 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23375 36 2.91732 3.54398 0.12206 3.44415 36 - -
23376 1.38629 1.38629 1.38629 1.38629
23377 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23378 37 0.14770 3.33730 2.77393 3.23493 37 - -
23379 1.38629 1.38629 1.38629 1.38629
23380 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23381 38 3.04545 2.56765 3.09524 0.18579 38 - -
23382 1.38629 1.38629 1.38629 1.38629
23383 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23384 39 2.91732 3.54398 0.12206 3.44415 39 - -
23385 1.38629 1.38629 1.38629 1.38629
23386 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23387 40 0.14770 3.33730 2.77393 3.23493 40 - -
23388 1.38629 1.38629 1.38629 1.38629
23389 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23390 41 0.14770 3.33730 2.77393 3.23493 41 - -
23391 1.38629 1.38629 1.38629 1.38629
23392 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23393 42 2.91732 3.54398 0.12206 3.44415 42 - -
23394 1.38629 1.38629 1.38629 1.38629
23395 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23396 43 0.14770 3.33730 2.77393 3.23493 43 - -
23397 1.38629 1.38629 1.38629 1.38629
23398 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23399 44 0.14770 3.33730 2.77393 3.23493 44 - -
23400 1.38629 1.38629 1.38629 1.38629
23401 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547
23402 45 3.38354 0.13628 3.43507 2.79277 45 - -
23403 1.38629 1.38629 1.38629 1.38629
23404 0.01908 3.96867 * 1.46634 0.26236 0.00000 *
23405 //
23406 HMMER3/b [3.0 | March 2010]
23407 NAME 2_5.8_Tracheophyta_58S_start_sevenr_long
23408 LENG 45
23409 ALPH DNA
23410 RF no
23411 CS no
23412 MAP yes
23413 DATE Fri Feb 17 15:59:15 2012
23414 NSEQ 74
23415 EFFN 3.184204
23416 CKSUM 2229931290
23417 STATS LOCAL MSV -8.1546 0.71932
23418 STATS LOCAL VITERBI -7.7675 0.71932
23419 STATS LOCAL FORWARD -3.8541 0.71932
23420 HMM A C G T
23421 m->m m->i m->d i->m i->i d->m d->d
23422 COMPO 1.40873 1.20772 1.38372 1.57976
23423 1.38629 1.38629 1.38629 1.38629
23424 0.03785 3.98605 3.98605 1.46634 0.26236 0.00000 *
23425 1 3.38075 0.13663 3.43240 2.79072 1 - -
23426 1.38629 1.38629 1.38629 1.38629
23427 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23428 2 2.91561 3.54151 0.12235 3.44143 2 - -
23429 1.38629 1.38629 1.38629 1.38629
23430 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23431 3 0.14804 3.33489 2.77235 3.23229 3 - -
23432 1.38629 1.38629 1.38629 1.38629
23433 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23434 4 3.38075 0.13663 3.43240 2.79072 4 - -
23435 1.38629 1.38629 1.38629 1.38629
23436 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23437 5 3.04304 2.56611 3.09292 0.18620 5 - -
23438 1.38629 1.38629 1.38629 1.38629
23439 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23440 6 3.38075 0.13663 3.43240 2.79072 6 - -
23441 1.38629 1.38629 1.38629 1.38629
23442 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23443 7 3.04304 2.56611 3.09292 0.18620 7 - -
23444 1.38629 1.38629 1.38629 1.38629
23445 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23446 8 3.38075 0.13663 3.43240 2.79072 8 - -
23447 1.38629 1.38629 1.38629 1.38629
23448 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23449 9 2.91561 3.54151 0.12235 3.44143 9 - -
23450 1.38629 1.38629 1.38629 1.38629
23451 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23452 10 2.91561 3.54151 0.12235 3.44143 10 - -
23453 1.38629 1.38629 1.38629 1.38629
23454 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23455 11 3.38075 0.13663 3.43240 2.79072 11 - -
23456 1.38629 1.38629 1.38629 1.38629
23457 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23458 12 0.14804 3.33489 2.77235 3.23229 12 - -
23459 1.38629 1.38629 1.38629 1.38629
23460 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23461 13 0.14804 3.33489 2.77235 3.23229 13 - -
23462 1.38629 1.38629 1.38629 1.38629
23463 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23464 14 3.38075 0.13663 3.43240 2.79072 14 - -
23465 1.38629 1.38629 1.38629 1.38629
23466 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23467 15 2.91561 3.54151 0.12235 3.44143 15 - -
23468 1.38629 1.38629 1.38629 1.38629
23469 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23470 16 2.91561 3.54151 0.12235 3.44143 16 - -
23471 1.38629 1.38629 1.38629 1.38629
23472 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23473 17 0.14804 3.33489 2.77235 3.23229 17 - -
23474 1.38629 1.38629 1.38629 1.38629
23475 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23476 18 3.04304 2.56611 3.09292 0.18620 18 - -
23477 1.38629 1.38629 1.38629 1.38629
23478 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23479 19 0.14804 3.33489 2.77235 3.23229 19 - -
23480 1.38629 1.38629 1.38629 1.38629
23481 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23482 20 3.04304 2.56611 3.09292 0.18620 20 - -
23483 1.38629 1.38629 1.38629 1.38629
23484 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23485 21 3.38075 0.13663 3.43240 2.79072 21 - -
23486 1.38629 1.38629 1.38629 1.38629
23487 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23488 22 3.04304 2.56611 3.09292 0.18620 22 - -
23489 1.38629 1.38629 1.38629 1.38629
23490 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23491 23 3.38075 0.13663 3.43240 2.79072 23 - -
23492 1.38629 1.38629 1.38629 1.38629
23493 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23494 24 2.91561 3.54151 0.12235 3.44143 24 - -
23495 1.38629 1.38629 1.38629 1.38629
23496 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23497 25 2.91561 3.54151 0.12235 3.44143 25 - -
23498 1.38629 1.38629 1.38629 1.38629
23499 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23500 26 3.38075 0.13663 3.43240 2.79072 26 - -
23501 1.38629 1.38629 1.38629 1.38629
23502 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23503 27 3.04304 2.56611 3.09292 0.18620 27 - -
23504 1.38629 1.38629 1.38629 1.38629
23505 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23506 28 3.38075 0.13663 3.43240 2.79072 28 - -
23507 1.38629 1.38629 1.38629 1.38629
23508 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23509 29 3.04304 2.56611 3.09292 0.18620 29 - -
23510 1.38629 1.38629 1.38629 1.38629
23511 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23512 30 3.38075 0.13663 3.43240 2.79072 30 - -
23513 1.38629 1.38629 1.38629 1.38629
23514 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23515 31 2.91561 3.54151 0.12235 3.44143 31 - -
23516 1.38629 1.38629 1.38629 1.38629
23517 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23518 32 3.38075 0.13663 3.43240 2.79072 32 - -
23519 1.38629 1.38629 1.38629 1.38629
23520 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23521 33 0.14804 3.33489 2.77235 3.23229 33 - -
23522 1.38629 1.38629 1.38629 1.38629
23523 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23524 34 3.04304 2.56611 3.09292 0.18620 34 - -
23525 1.38629 1.38629 1.38629 1.38629
23526 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23527 35 3.38075 0.13663 3.43240 2.79072 35 - -
23528 1.38629 1.38629 1.38629 1.38629
23529 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23530 36 2.91561 3.54151 0.12235 3.44143 36 - -
23531 1.38629 1.38629 1.38629 1.38629
23532 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23533 37 0.14804 3.33489 2.77235 3.23229 37 - -
23534 1.38629 1.38629 1.38629 1.38629
23535 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23536 38 3.04304 2.56611 3.09292 0.18620 38 - -
23537 1.38629 1.38629 1.38629 1.38629
23538 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23539 39 2.91561 3.54151 0.12235 3.44143 39 - -
23540 1.38629 1.38629 1.38629 1.38629
23541 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23542 40 0.14804 3.33489 2.77235 3.23229 40 - -
23543 1.38629 1.38629 1.38629 1.38629
23544 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23545 41 0.14804 3.33489 2.77235 3.23229 41 - -
23546 1.38629 1.38629 1.38629 1.38629
23547 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23548 42 2.91561 3.54151 0.12235 3.44143 42 - -
23549 1.38629 1.38629 1.38629 1.38629
23550 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23551 43 0.14804 3.33489 2.77235 3.23229 43 - -
23552 1.38629 1.38629 1.38629 1.38629
23553 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23554 44 0.14804 3.33489 2.77235 3.23229 44 - -
23555 1.38629 1.38629 1.38629 1.38629
23556 0.03785 3.98605 3.98605 1.46634 0.26236 1.09861 0.40547
23557 45 3.38075 0.13663 3.43240 2.79072 45 - -
23558 1.38629 1.38629 1.38629 1.38629
23559 0.01911 3.96731 * 1.46634 0.26236 0.00000 *
23560 //
23561 HMMER3/b [3.0 | March 2010]
23562 NAME 2_5.8_Tracheophyta_58S_start_sevens_long
23563 LENG 45
23564 ALPH DNA
23565 RF no
23566 CS no
23567 MAP yes
23568 DATE Fri Feb 17 15:59:22 2012
23569 NSEQ 26
23570 EFFN 3.310303
23571 CKSUM 3119625533
23572 STATS LOCAL MSV -8.1714 0.71932
23573 STATS LOCAL VITERBI -7.5462 0.71932
23574 STATS LOCAL FORWARD -4.0110 0.71932
23575 HMM A C G T
23576 m->m m->i m->d i->m i->i d->m d->d
23577 COMPO 1.33741 1.25636 1.37825 1.60561
23578 1.38629 1.38629 1.38629 1.38629
23579 0.03697 4.00920 4.00920 1.46634 0.26236 0.00000 *
23580 1 3.42853 0.13075 3.47818 2.82567 1 - -
23581 1.38629 1.38629 1.38629 1.38629
23582 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23583 2 2.94476 3.58372 0.11760 3.48798 2 - -
23584 1.38629 1.38629 1.38629 1.38629
23585 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23586 3 0.14242 3.37629 2.79934 3.27758 3 - -
23587 1.38629 1.38629 1.38629 1.38629
23588 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23589 4 3.42853 0.13075 3.47818 2.82567 4 - -
23590 1.38629 1.38629 1.38629 1.38629
23591 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23592 5 3.08460 2.59259 3.13291 0.17932 5 - -
23593 1.38629 1.38629 1.38629 1.38629
23594 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23595 6 3.42853 0.13075 3.47818 2.82567 6 - -
23596 1.38629 1.38629 1.38629 1.38629
23597 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23598 7 2.48923 1.32755 2.55816 0.55433 7 - -
23599 1.38629 1.38629 1.38629 1.38629
23600 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23601 8 3.42853 0.13075 3.47818 2.82567 8 - -
23602 1.38629 1.38629 1.38629 1.38629
23603 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23604 9 2.94476 3.58372 0.11760 3.48798 9 - -
23605 1.38629 1.38629 1.38629 1.38629
23606 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23607 10 2.94476 3.58372 0.11760 3.48798 10 - -
23608 1.38629 1.38629 1.38629 1.38629
23609 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23610 11 3.42853 0.13075 3.47818 2.82567 11 - -
23611 1.38629 1.38629 1.38629 1.38629
23612 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23613 12 0.14242 3.37629 2.79934 3.27758 12 - -
23614 1.38629 1.38629 1.38629 1.38629
23615 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23616 13 0.14242 3.37629 2.79934 3.27758 13 - -
23617 1.38629 1.38629 1.38629 1.38629
23618 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23619 14 3.42853 0.13075 3.47818 2.82567 14 - -
23620 1.38629 1.38629 1.38629 1.38629
23621 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23622 15 2.94476 3.58372 0.11760 3.48798 15 - -
23623 1.38629 1.38629 1.38629 1.38629
23624 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23625 16 2.94476 3.58372 0.11760 3.48798 16 - -
23626 1.38629 1.38629 1.38629 1.38629
23627 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23628 17 0.14242 3.37629 2.79934 3.27758 17 - -
23629 1.38629 1.38629 1.38629 1.38629
23630 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23631 18 3.08460 2.59259 3.13291 0.17932 18 - -
23632 1.38629 1.38629 1.38629 1.38629
23633 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23634 19 0.14242 3.37629 2.79934 3.27758 19 - -
23635 1.38629 1.38629 1.38629 1.38629
23636 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23637 20 3.08460 2.59259 3.13291 0.17932 20 - -
23638 1.38629 1.38629 1.38629 1.38629
23639 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23640 21 3.10916 0.21109 3.16829 2.26736 21 - -
23641 1.38629 1.38629 1.38629 1.38629
23642 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23643 22 3.08460 2.59259 3.13291 0.17932 22 - -
23644 1.38629 1.38629 1.38629 1.38629
23645 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23646 23 0.14242 3.37629 2.79934 3.27758 23 - -
23647 1.38629 1.38629 1.38629 1.38629
23648 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23649 24 2.94476 3.58372 0.11760 3.48798 24 - -
23650 1.38629 1.38629 1.38629 1.38629
23651 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23652 25 2.94476 3.58372 0.11760 3.48798 25 - -
23653 1.38629 1.38629 1.38629 1.38629
23654 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23655 26 3.42853 0.13075 3.47818 2.82567 26 - -
23656 1.38629 1.38629 1.38629 1.38629
23657 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23658 27 3.08460 2.59259 3.13291 0.17932 27 - -
23659 1.38629 1.38629 1.38629 1.38629
23660 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23661 28 3.42853 0.13075 3.47818 2.82567 28 - -
23662 1.38629 1.38629 1.38629 1.38629
23663 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23664 29 3.08460 2.59259 3.13291 0.17932 29 - -
23665 1.38629 1.38629 1.38629 1.38629
23666 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23667 30 3.42853 0.13075 3.47818 2.82567 30 - -
23668 1.38629 1.38629 1.38629 1.38629
23669 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23670 31 2.94476 3.58372 0.11760 3.48798 31 - -
23671 1.38629 1.38629 1.38629 1.38629
23672 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23673 32 3.42853 0.13075 3.47818 2.82567 32 - -
23674 1.38629 1.38629 1.38629 1.38629
23675 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23676 33 0.14242 3.37629 2.79934 3.27758 33 - -
23677 1.38629 1.38629 1.38629 1.38629
23678 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23679 34 3.08460 2.59259 3.13291 0.17932 34 - -
23680 1.38629 1.38629 1.38629 1.38629
23681 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23682 35 3.42853 0.13075 3.47818 2.82567 35 - -
23683 1.38629 1.38629 1.38629 1.38629
23684 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23685 36 2.94476 3.58372 0.11760 3.48798 36 - -
23686 1.38629 1.38629 1.38629 1.38629
23687 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23688 37 0.14242 3.37629 2.79934 3.27758 37 - -
23689 1.38629 1.38629 1.38629 1.38629
23690 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23691 38 3.08460 2.59259 3.13291 0.17932 38 - -
23692 1.38629 1.38629 1.38629 1.38629
23693 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23694 39 2.94476 3.58372 0.11760 3.48798 39 - -
23695 1.38629 1.38629 1.38629 1.38629
23696 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23697 40 0.14242 3.37629 2.79934 3.27758 40 - -
23698 1.38629 1.38629 1.38629 1.38629
23699 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23700 41 0.14242 3.37629 2.79934 3.27758 41 - -
23701 1.38629 1.38629 1.38629 1.38629
23702 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23703 42 2.94476 3.58372 0.11760 3.48798 42 - -
23704 1.38629 1.38629 1.38629 1.38629
23705 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23706 43 0.14242 3.37629 2.79934 3.27758 43 - -
23707 1.38629 1.38629 1.38629 1.38629
23708 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23709 44 0.14242 3.37629 2.79934 3.27758 44 - -
23710 1.38629 1.38629 1.38629 1.38629
23711 0.03697 4.00920 4.00920 1.46634 0.26236 1.09861 0.40547
23712 45 3.42853 0.13075 3.47818 2.82567 45 - -
23713 1.38629 1.38629 1.38629 1.38629
23714 0.01866 3.99089 * 1.46634 0.26236 0.00000 *
23715 //
23716 HMMER3/b [3.0 | March 2010]
23717 NAME 2_5.8_Tracheophyta_58S_start_sevent_long
23718 LENG 45
23719 ALPH DNA
23720 RF no
23721 CS no
23722 MAP yes
23723 DATE Fri Feb 17 15:59:29 2012
23724 NSEQ 45
23725 EFFN 3.331604
23726 CKSUM 206813971
23727 STATS LOCAL MSV -8.1957 0.71932
23728 STATS LOCAL VITERBI -7.6561 0.71932
23729 STATS LOCAL FORWARD -3.8955 0.71932
23730 HMM A C G T
23731 m->m m->i m->d i->m i->i d->m d->d
23732 COMPO 1.38293 1.23894 1.37747 1.57383
23733 1.38629 1.38629 1.38629 1.38629
23734 0.03683 4.01306 4.01306 1.46634 0.26236 0.00000 *
23735 1 3.43639 0.12982 3.48571 2.83139 1 - -
23736 1.38629 1.38629 1.38629 1.38629
23737 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23738 2 2.94952 3.59065 0.11684 3.49562 2 - -
23739 1.38629 1.38629 1.38629 1.38629
23740 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23741 3 0.14152 3.38311 2.80378 3.28505 3 - -
23742 1.38629 1.38629 1.38629 1.38629
23743 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23744 4 3.43639 0.12982 3.48571 2.83139 4 - -
23745 1.38629 1.38629 1.38629 1.38629
23746 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23747 5 3.09149 2.59697 3.13953 0.17821 5 - -
23748 1.38629 1.38629 1.38629 1.38629
23749 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23750 6 3.43639 0.12982 3.48571 2.83139 6 - -
23751 1.38629 1.38629 1.38629 1.38629
23752 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23753 7 3.09149 2.59697 3.13953 0.17821 7 - -
23754 1.38629 1.38629 1.38629 1.38629
23755 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23756 8 3.43639 0.12982 3.48571 2.83139 8 - -
23757 1.38629 1.38629 1.38629 1.38629
23758 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23759 9 2.94952 3.59065 0.11684 3.49562 9 - -
23760 1.38629 1.38629 1.38629 1.38629
23761 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23762 10 2.94952 3.59065 0.11684 3.49562 10 - -
23763 1.38629 1.38629 1.38629 1.38629
23764 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23765 11 3.43639 0.12982 3.48571 2.83139 11 - -
23766 1.38629 1.38629 1.38629 1.38629
23767 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23768 12 0.14152 3.38311 2.80378 3.28505 12 - -
23769 1.38629 1.38629 1.38629 1.38629
23770 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23771 13 0.14152 3.38311 2.80378 3.28505 13 - -
23772 1.38629 1.38629 1.38629 1.38629
23773 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23774 14 3.43639 0.12982 3.48571 2.83139 14 - -
23775 1.38629 1.38629 1.38629 1.38629
23776 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23777 15 2.94952 3.59065 0.11684 3.49562 15 - -
23778 1.38629 1.38629 1.38629 1.38629
23779 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23780 16 2.94952 3.59065 0.11684 3.49562 16 - -
23781 1.38629 1.38629 1.38629 1.38629
23782 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23783 17 0.14152 3.38311 2.80378 3.28505 17 - -
23784 1.38629 1.38629 1.38629 1.38629
23785 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23786 18 3.09149 2.59697 3.13953 0.17821 18 - -
23787 1.38629 1.38629 1.38629 1.38629
23788 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23789 19 0.14152 3.38311 2.80378 3.28505 19 - -
23790 1.38629 1.38629 1.38629 1.38629
23791 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23792 20 3.09149 2.59697 3.13953 0.17821 20 - -
23793 1.38629 1.38629 1.38629 1.38629
23794 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23795 21 3.43639 0.12982 3.48571 2.83139 21 - -
23796 1.38629 1.38629 1.38629 1.38629
23797 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23798 22 3.09149 2.59697 3.13953 0.17821 22 - -
23799 1.38629 1.38629 1.38629 1.38629
23800 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23801 23 1.05652 0.92289 2.14755 1.97908 23 - -
23802 1.38629 1.38629 1.38629 1.38629
23803 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23804 24 2.94952 3.59065 0.11684 3.49562 24 - -
23805 1.38629 1.38629 1.38629 1.38629
23806 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23807 25 2.94952 3.59065 0.11684 3.49562 25 - -
23808 1.38629 1.38629 1.38629 1.38629
23809 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23810 26 3.43639 0.12982 3.48571 2.83139 26 - -
23811 1.38629 1.38629 1.38629 1.38629
23812 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23813 27 3.09149 2.59697 3.13953 0.17821 27 - -
23814 1.38629 1.38629 1.38629 1.38629
23815 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23816 28 3.43639 0.12982 3.48571 2.83139 28 - -
23817 1.38629 1.38629 1.38629 1.38629
23818 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23819 29 3.09149 2.59697 3.13953 0.17821 29 - -
23820 1.38629 1.38629 1.38629 1.38629
23821 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23822 30 3.43639 0.12982 3.48571 2.83139 30 - -
23823 1.38629 1.38629 1.38629 1.38629
23824 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23825 31 2.94952 3.59065 0.11684 3.49562 31 - -
23826 1.38629 1.38629 1.38629 1.38629
23827 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23828 32 3.43639 0.12982 3.48571 2.83139 32 - -
23829 1.38629 1.38629 1.38629 1.38629
23830 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23831 33 0.14152 3.38311 2.80378 3.28505 33 - -
23832 1.38629 1.38629 1.38629 1.38629
23833 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23834 34 3.09149 2.59697 3.13953 0.17821 34 - -
23835 1.38629 1.38629 1.38629 1.38629
23836 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23837 35 3.43639 0.12982 3.48571 2.83139 35 - -
23838 1.38629 1.38629 1.38629 1.38629
23839 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23840 36 2.94952 3.59065 0.11684 3.49562 36 - -
23841 1.38629 1.38629 1.38629 1.38629
23842 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23843 37 0.14152 3.38311 2.80378 3.28505 37 - -
23844 1.38629 1.38629 1.38629 1.38629
23845 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23846 38 3.09149 2.59697 3.13953 0.17821 38 - -
23847 1.38629 1.38629 1.38629 1.38629
23848 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23849 39 2.94952 3.59065 0.11684 3.49562 39 - -
23850 1.38629 1.38629 1.38629 1.38629
23851 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23852 40 0.14152 3.38311 2.80378 3.28505 40 - -
23853 1.38629 1.38629 1.38629 1.38629
23854 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23855 41 0.14152 3.38311 2.80378 3.28505 41 - -
23856 1.38629 1.38629 1.38629 1.38629
23857 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23858 42 2.94952 3.59065 0.11684 3.49562 42 - -
23859 1.38629 1.38629 1.38629 1.38629
23860 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23861 43 0.14152 3.38311 2.80378 3.28505 43 - -
23862 1.38629 1.38629 1.38629 1.38629
23863 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23864 44 0.14152 3.38311 2.80378 3.28505 44 - -
23865 1.38629 1.38629 1.38629 1.38629
23866 0.03683 4.01306 4.01306 1.46634 0.26236 1.09861 0.40547
23867 45 3.43639 0.12982 3.48571 2.83139 45 - -
23868 1.38629 1.38629 1.38629 1.38629
23869 0.01858 3.99482 * 1.46634 0.26236 0.00000 *
23870 //
23871 HMMER3/b [3.0 | March 2010]
23872 NAME 2_5.8_Tracheophyta_58S_start_sevenu_long
23873 LENG 45
23874 ALPH DNA
23875 RF no
23876 CS no
23877 MAP yes
23878 DATE Fri Feb 17 15:59:44 2012
23879 NSEQ 29
23880 EFFN 3.196655
23881 CKSUM 1208045264
23882 STATS LOCAL MSV -8.0269 0.71932
23883 STATS LOCAL VITERBI -7.6133 0.71932
23884 STATS LOCAL FORWARD -3.7499 0.71932
23885 HMM A C G T
23886 m->m m->i m->d i->m i->i d->m d->d
23887 COMPO 1.34312 1.20706 1.45348 1.57920
23888 1.38629 1.38629 1.38629 1.38629
23889 0.03776 3.98836 3.98836 1.46634 0.26236 0.00000 *
23890 1 3.38556 0.13603 3.43701 2.79425 1 - -
23891 1.38629 1.38629 1.38629 1.38629
23892 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23893 2 2.91856 3.54577 0.12186 3.44613 2 - -
23894 1.38629 1.38629 1.38629 1.38629
23895 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23896 3 0.14746 3.33905 2.77507 3.23685 3 - -
23897 1.38629 1.38629 1.38629 1.38629
23898 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23899 4 3.38556 0.13603 3.43701 2.79425 4 - -
23900 1.38629 1.38629 1.38629 1.38629
23901 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23902 5 3.04720 2.56877 3.09693 0.18550 5 - -
23903 1.38629 1.38629 1.38629 1.38629
23904 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23905 6 3.38556 0.13603 3.43701 2.79425 6 - -
23906 1.38629 1.38629 1.38629 1.38629
23907 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23908 7 3.04720 2.56877 3.09693 0.18550 7 - -
23909 1.38629 1.38629 1.38629 1.38629
23910 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23911 8 3.38556 0.13603 3.43701 2.79425 8 - -
23912 1.38629 1.38629 1.38629 1.38629
23913 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23914 9 2.91856 3.54577 0.12186 3.44613 9 - -
23915 1.38629 1.38629 1.38629 1.38629
23916 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23917 10 0.14746 3.33905 2.77507 3.23685 10 - -
23918 1.38629 1.38629 1.38629 1.38629
23919 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23920 11 3.38556 0.13603 3.43701 2.79425 11 - -
23921 1.38629 1.38629 1.38629 1.38629
23922 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23923 12 0.14746 3.33905 2.77507 3.23685 12 - -
23924 1.38629 1.38629 1.38629 1.38629
23925 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23926 13 0.14746 3.33905 2.77507 3.23685 13 - -
23927 1.38629 1.38629 1.38629 1.38629
23928 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23929 14 3.38556 0.13603 3.43701 2.79425 14 - -
23930 1.38629 1.38629 1.38629 1.38629
23931 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23932 15 2.91856 3.54577 0.12186 3.44613 15 - -
23933 1.38629 1.38629 1.38629 1.38629
23934 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23935 16 2.91856 3.54577 0.12186 3.44613 16 - -
23936 1.38629 1.38629 1.38629 1.38629
23937 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23938 17 0.14746 3.33905 2.77507 3.23685 17 - -
23939 1.38629 1.38629 1.38629 1.38629
23940 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23941 18 3.04720 2.56877 3.09693 0.18550 18 - -
23942 1.38629 1.38629 1.38629 1.38629
23943 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23944 19 0.14746 3.33905 2.77507 3.23685 19 - -
23945 1.38629 1.38629 1.38629 1.38629
23946 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23947 20 3.04720 2.56877 3.09693 0.18550 20 - -
23948 1.38629 1.38629 1.38629 1.38629
23949 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23950 21 3.38556 0.13603 3.43701 2.79425 21 - -
23951 1.38629 1.38629 1.38629 1.38629
23952 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23953 22 3.04720 2.56877 3.09693 0.18550 22 - -
23954 1.38629 1.38629 1.38629 1.38629
23955 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23956 23 3.38556 0.13603 3.43701 2.79425 23 - -
23957 1.38629 1.38629 1.38629 1.38629
23958 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23959 24 2.91856 3.54577 0.12186 3.44613 24 - -
23960 1.38629 1.38629 1.38629 1.38629
23961 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23962 25 2.91856 3.54577 0.12186 3.44613 25 - -
23963 1.38629 1.38629 1.38629 1.38629
23964 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23965 26 3.38556 0.13603 3.43701 2.79425 26 - -
23966 1.38629 1.38629 1.38629 1.38629
23967 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23968 27 3.04720 2.56877 3.09693 0.18550 27 - -
23969 1.38629 1.38629 1.38629 1.38629
23970 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23971 28 3.38556 0.13603 3.43701 2.79425 28 - -
23972 1.38629 1.38629 1.38629 1.38629
23973 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23974 29 3.04720 2.56877 3.09693 0.18550 29 - -
23975 1.38629 1.38629 1.38629 1.38629
23976 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23977 30 3.38556 0.13603 3.43701 2.79425 30 - -
23978 1.38629 1.38629 1.38629 1.38629
23979 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23980 31 2.91856 3.54577 0.12186 3.44613 31 - -
23981 1.38629 1.38629 1.38629 1.38629
23982 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23983 32 3.38556 0.13603 3.43701 2.79425 32 - -
23984 1.38629 1.38629 1.38629 1.38629
23985 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23986 33 0.14746 3.33905 2.77507 3.23685 33 - -
23987 1.38629 1.38629 1.38629 1.38629
23988 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23989 34 3.04720 2.56877 3.09693 0.18550 34 - -
23990 1.38629 1.38629 1.38629 1.38629
23991 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23992 35 3.38556 0.13603 3.43701 2.79425 35 - -
23993 1.38629 1.38629 1.38629 1.38629
23994 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23995 36 2.91856 3.54577 0.12186 3.44613 36 - -
23996 1.38629 1.38629 1.38629 1.38629
23997 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
23998 37 0.14746 3.33905 2.77507 3.23685 37 - -
23999 1.38629 1.38629 1.38629 1.38629
24000 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24001 38 3.04720 2.56877 3.09693 0.18550 38 - -
24002 1.38629 1.38629 1.38629 1.38629
24003 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24004 39 2.91856 3.54577 0.12186 3.44613 39 - -
24005 1.38629 1.38629 1.38629 1.38629
24006 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24007 40 0.14746 3.33905 2.77507 3.23685 40 - -
24008 1.38629 1.38629 1.38629 1.38629
24009 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24010 41 0.14746 3.33905 2.77507 3.23685 41 - -
24011 1.38629 1.38629 1.38629 1.38629
24012 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24013 42 2.91856 3.54577 0.12186 3.44613 42 - -
24014 1.38629 1.38629 1.38629 1.38629
24015 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24016 43 0.14746 3.33905 2.77507 3.23685 43 - -
24017 1.38629 1.38629 1.38629 1.38629
24018 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24019 44 0.14746 3.33905 2.77507 3.23685 44 - -
24020 1.38629 1.38629 1.38629 1.38629
24021 0.03776 3.98836 3.98836 1.46634 0.26236 1.09861 0.40547
24022 45 3.38556 0.13603 3.43701 2.79425 45 - -
24023 1.38629 1.38629 1.38629 1.38629
24024 0.01906 3.96966 * 1.46634 0.26236 0.00000 *
24025 //
24026 HMMER3/b [3.0 | March 2010]
24027 NAME 2_5.8_Tracheophyta_58S_start_six_long
24028 LENG 45
24029 ALPH DNA
24030 RF no
24031 CS no
24032 MAP yes
24033 DATE Fri Feb 17 15:57:14 2012
24034 NSEQ 25
24035 EFFN 3.634644
24036 CKSUM 3375772547
24037 STATS LOCAL MSV -7.6909 0.71933
24038 STATS LOCAL VITERBI -7.6485 0.71933
24039 STATS LOCAL FORWARD -4.2957 0.71933
24040 HMM A C G T
24041 m->m m->i m->d i->m i->i d->m d->d
24042 COMPO 1.41402 1.35683 1.31536 1.46541
24043 1.38629 1.38629 1.38629 1.38629
24044 0.03488 4.06640 4.06640 1.46634 0.26236 0.00000 *
24045 1 3.01261 3.68311 0.10724 3.59789 1 - -
24046 1.38629 1.38629 1.38629 1.38629
24047 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24048 2 3.01261 3.68311 0.10724 3.59789 2 - -
24049 1.38629 1.38629 1.38629 1.38629
24050 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24051 3 0.20058 3.22612 2.32391 3.12033 3 - -
24052 1.38629 1.38629 1.38629 1.38629
24053 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24054 4 3.54206 0.11793 3.58677 2.90766 4 - -
24055 1.38629 1.38629 1.38629 1.38629
24056 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24057 5 3.18542 2.65659 3.22983 0.16383 5 - -
24058 1.38629 1.38629 1.38629 1.38629
24059 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24060 6 3.54206 0.11793 3.58677 2.90766 6 - -
24061 1.38629 1.38629 1.38629 1.38629
24062 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24063 7 2.45961 0.91446 2.53114 0.83418 7 - -
24064 1.38629 1.38629 1.38629 1.38629
24065 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24066 8 3.54206 0.11793 3.58677 2.90766 8 - -
24067 1.38629 1.38629 1.38629 1.38629
24068 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24069 9 1.15707 2.62856 0.63457 2.48594 9 - -
24070 1.38629 1.38629 1.38629 1.38629
24071 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24072 10 0.63166 2.60938 1.17129 2.46809 10 - -
24073 1.38629 1.38629 1.38629 1.38629
24074 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24075 11 3.54206 0.11793 3.58677 2.90766 11 - -
24076 1.38629 1.38629 1.38629 1.38629
24077 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24078 12 0.12998 3.47513 2.86322 3.38593 12 - -
24079 1.38629 1.38629 1.38629 1.38629
24080 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24081 13 0.12998 3.47513 2.86322 3.38593 13 - -
24082 1.38629 1.38629 1.38629 1.38629
24083 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24084 14 3.18542 2.65659 3.22983 0.16383 14 - -
24085 1.38629 1.38629 1.38629 1.38629
24086 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24087 15 3.01261 3.68311 0.10724 3.59789 15 - -
24088 1.38629 1.38629 1.38629 1.38629
24089 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24090 16 3.01261 3.68311 0.10724 3.59789 16 - -
24091 1.38629 1.38629 1.38629 1.38629
24092 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24093 17 0.12998 3.47513 2.86322 3.38593 17 - -
24094 1.38629 1.38629 1.38629 1.38629
24095 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24096 18 3.18542 2.65659 3.22983 0.16383 18 - -
24097 1.38629 1.38629 1.38629 1.38629
24098 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24099 19 0.12998 3.47513 2.86322 3.38593 19 - -
24100 1.38629 1.38629 1.38629 1.38629
24101 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24102 20 3.18542 2.65659 3.22983 0.16383 20 - -
24103 1.38629 1.38629 1.38629 1.38629
24104 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24105 21 3.54206 0.11793 3.58677 2.90766 21 - -
24106 1.38629 1.38629 1.38629 1.38629
24107 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24108 22 3.18542 2.65659 3.22983 0.16383 22 - -
24109 1.38629 1.38629 1.38629 1.38629
24110 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24111 23 3.18542 2.65659 3.22983 0.16383 23 - -
24112 1.38629 1.38629 1.38629 1.38629
24113 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24114 24 3.01261 3.68311 0.10724 3.59789 24 - -
24115 1.38629 1.38629 1.38629 1.38629
24116 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24117 25 3.01261 3.68311 0.10724 3.59789 25 - -
24118 1.38629 1.38629 1.38629 1.38629
24119 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24120 26 3.54206 0.11793 3.58677 2.90766 26 - -
24121 1.38629 1.38629 1.38629 1.38629
24122 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24123 27 3.18542 2.65659 3.22983 0.16383 27 - -
24124 1.38629 1.38629 1.38629 1.38629
24125 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24126 28 3.54206 0.11793 3.58677 2.90766 28 - -
24127 1.38629 1.38629 1.38629 1.38629
24128 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24129 29 3.18542 2.65659 3.22983 0.16383 29 - -
24130 1.38629 1.38629 1.38629 1.38629
24131 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24132 30 3.54206 0.11793 3.58677 2.90766 30 - -
24133 1.38629 1.38629 1.38629 1.38629
24134 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24135 31 3.01261 3.68311 0.10724 3.59789 31 - -
24136 1.38629 1.38629 1.38629 1.38629
24137 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24138 32 3.54206 0.11793 3.58677 2.90766 32 - -
24139 1.38629 1.38629 1.38629 1.38629
24140 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24141 33 0.12998 3.47513 2.86322 3.38593 33 - -
24142 1.38629 1.38629 1.38629 1.38629
24143 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24144 34 3.18542 2.65659 3.22983 0.16383 34 - -
24145 1.38629 1.38629 1.38629 1.38629
24146 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24147 35 3.54206 0.11793 3.58677 2.90766 35 - -
24148 1.38629 1.38629 1.38629 1.38629
24149 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24150 36 3.01261 3.68311 0.10724 3.59789 36 - -
24151 1.38629 1.38629 1.38629 1.38629
24152 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24153 37 0.12998 3.47513 2.86322 3.38593 37 - -
24154 1.38629 1.38629 1.38629 1.38629
24155 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24156 38 3.18542 2.65659 3.22983 0.16383 38 - -
24157 1.38629 1.38629 1.38629 1.38629
24158 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24159 39 3.01261 3.68311 0.10724 3.59789 39 - -
24160 1.38629 1.38629 1.38629 1.38629
24161 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24162 40 0.12998 3.47513 2.86322 3.38593 40 - -
24163 1.38629 1.38629 1.38629 1.38629
24164 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24165 41 0.12998 3.47513 2.86322 3.38593 41 - -
24166 1.38629 1.38629 1.38629 1.38629
24167 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24168 42 3.01261 3.68311 0.10724 3.59789 42 - -
24169 1.38629 1.38629 1.38629 1.38629
24170 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24171 43 0.12998 3.47513 2.86322 3.38593 43 - -
24172 1.38629 1.38629 1.38629 1.38629
24173 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24174 44 3.01261 3.68311 0.10724 3.59789 44 - -
24175 1.38629 1.38629 1.38629 1.38629
24176 0.03488 4.06640 4.06640 1.46634 0.26236 1.09861 0.40547
24177 45 3.54206 0.11793 3.58677 2.90766 45 - -
24178 1.38629 1.38629 1.38629 1.38629
24179 0.01759 4.04911 * 1.46634 0.26236 0.00000 *
24180 //
24181 HMMER3/b [3.0 | March 2010]
24182 NAME 2_5.8_Tracheophyta_58S_start_ten_long
24183 LENG 45
24184 ALPH DNA
24185 RF no
24186 CS no
24187 MAP yes
24188 DATE Fri Feb 17 16:14:50 2012
24189 NSEQ 8
24190 EFFN 3.410156
24191 CKSUM 2247624815
24192 STATS LOCAL MSV -7.6172 0.71932
24193 STATS LOCAL VITERBI -7.5031 0.71932
24194 STATS LOCAL FORWARD -4.1590 0.71932
24195 HMM A C G T
24196 m->m m->i m->d i->m i->i d->m d->d
24197 COMPO 1.33211 1.33801 1.36527 1.52141
24198 1.38629 1.38629 1.38629 1.38629
24199 0.03630 4.02716 4.02716 1.46634 0.26236 0.00000 *
24200 1 2.29532 0.53992 1.62521 2.12354 1 - -
24201 1.38629 1.38629 1.38629 1.38629
24202 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24203 2 2.96668 3.61569 0.11415 3.52327 2 - -
24204 1.38629 1.38629 1.38629 1.38629
24205 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24206 3 0.13830 3.40786 2.81982 3.31216 3 - -
24207 1.38629 1.38629 1.38629 1.38629
24208 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24209 4 3.46489 0.12648 3.51299 2.85207 4 - -
24210 1.38629 1.38629 1.38629 1.38629
24211 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24212 5 3.11656 2.61290 3.16364 0.17424 5 - -
24213 1.38629 1.38629 1.38629 1.38629
24214 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24215 6 3.46489 0.12648 3.51299 2.85207 6 - -
24216 1.38629 1.38629 1.38629 1.38629
24217 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24218 7 3.11656 2.61290 3.16364 0.17424 7 - -
24219 1.38629 1.38629 1.38629 1.38629
24220 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24221 8 3.46489 0.12648 3.51299 2.85207 8 - -
24222 1.38629 1.38629 1.38629 1.38629
24223 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24224 9 2.96668 3.61569 0.11415 3.52327 9 - -
24225 1.38629 1.38629 1.38629 1.38629
24226 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24227 10 2.96668 3.61569 0.11415 3.52327 10 - -
24228 1.38629 1.38629 1.38629 1.38629
24229 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24230 11 3.46489 0.12648 3.51299 2.85207 11 - -
24231 1.38629 1.38629 1.38629 1.38629
24232 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24233 12 0.13830 3.40786 2.81982 3.31216 12 - -
24234 1.38629 1.38629 1.38629 1.38629
24235 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24236 13 0.13830 3.40786 2.81982 3.31216 13 - -
24237 1.38629 1.38629 1.38629 1.38629
24238 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24239 14 2.61100 1.55260 2.67637 0.43691 14 - -
24240 1.38629 1.38629 1.38629 1.38629
24241 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24242 15 2.96668 3.61569 0.11415 3.52327 15 - -
24243 1.38629 1.38629 1.38629 1.38629
24244 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24245 16 2.96668 3.61569 0.11415 3.52327 16 - -
24246 1.38629 1.38629 1.38629 1.38629
24247 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24248 17 0.13830 3.40786 2.81982 3.31216 17 - -
24249 1.38629 1.38629 1.38629 1.38629
24250 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24251 18 3.11656 2.61290 3.16364 0.17424 18 - -
24252 1.38629 1.38629 1.38629 1.38629
24253 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24254 19 0.13830 3.40786 2.81982 3.31216 19 - -
24255 1.38629 1.38629 1.38629 1.38629
24256 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24257 20 3.11656 2.61290 3.16364 0.17424 20 - -
24258 1.38629 1.38629 1.38629 1.38629
24259 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24260 21 3.46489 0.12648 3.51299 2.85207 21 - -
24261 1.38629 1.38629 1.38629 1.38629
24262 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24263 22 3.11656 2.61290 3.16364 0.17424 22 - -
24264 1.38629 1.38629 1.38629 1.38629
24265 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24266 23 0.13830 3.40786 2.81982 3.31216 23 - -
24267 1.38629 1.38629 1.38629 1.38629
24268 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24269 24 2.96668 3.61569 0.11415 3.52327 24 - -
24270 1.38629 1.38629 1.38629 1.38629
24271 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24272 25 2.96668 3.61569 0.11415 3.52327 25 - -
24273 1.38629 1.38629 1.38629 1.38629
24274 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24275 26 3.46489 0.12648 3.51299 2.85207 26 - -
24276 1.38629 1.38629 1.38629 1.38629
24277 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24278 27 3.11656 2.61290 3.16364 0.17424 27 - -
24279 1.38629 1.38629 1.38629 1.38629
24280 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24281 28 3.46489 0.12648 3.51299 2.85207 28 - -
24282 1.38629 1.38629 1.38629 1.38629
24283 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24284 29 3.11656 2.61290 3.16364 0.17424 29 - -
24285 1.38629 1.38629 1.38629 1.38629
24286 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24287 30 3.46489 0.12648 3.51299 2.85207 30 - -
24288 1.38629 1.38629 1.38629 1.38629
24289 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24290 31 2.96668 3.61569 0.11415 3.52327 31 - -
24291 1.38629 1.38629 1.38629 1.38629
24292 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24293 32 3.46489 0.12648 3.51299 2.85207 32 - -
24294 1.38629 1.38629 1.38629 1.38629
24295 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24296 33 0.13830 3.40786 2.81982 3.31216 33 - -
24297 1.38629 1.38629 1.38629 1.38629
24298 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24299 34 3.11656 2.61290 3.16364 0.17424 34 - -
24300 1.38629 1.38629 1.38629 1.38629
24301 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24302 35 3.46489 0.12648 3.51299 2.85207 35 - -
24303 1.38629 1.38629 1.38629 1.38629
24304 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24305 36 2.96668 3.61569 0.11415 3.52327 36 - -
24306 1.38629 1.38629 1.38629 1.38629
24307 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24308 37 0.13830 3.40786 2.81982 3.31216 37 - -
24309 1.38629 1.38629 1.38629 1.38629
24310 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24311 38 3.11656 2.61290 3.16364 0.17424 38 - -
24312 1.38629 1.38629 1.38629 1.38629
24313 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24314 39 2.96668 3.61569 0.11415 3.52327 39 - -
24315 1.38629 1.38629 1.38629 1.38629
24316 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24317 40 0.13830 3.40786 2.81982 3.31216 40 - -
24318 1.38629 1.38629 1.38629 1.38629
24319 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24320 41 0.13830 3.40786 2.81982 3.31216 41 - -
24321 1.38629 1.38629 1.38629 1.38629
24322 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24323 42 2.96668 3.61569 0.11415 3.52327 42 - -
24324 1.38629 1.38629 1.38629 1.38629
24325 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24326 43 0.13830 3.40786 2.81982 3.31216 43 - -
24327 1.38629 1.38629 1.38629 1.38629
24328 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24329 44 0.13830 3.40786 2.81982 3.31216 44 - -
24330 1.38629 1.38629 1.38629 1.38629
24331 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547
24332 45 3.46489 0.12648 3.51299 2.85207 45 - -
24333 1.38629 1.38629 1.38629 1.38629
24334 0.01832 4.00918 * 1.46634 0.26236 0.00000 *
24335 //
24336 HMMER3/b [3.0 | March 2010]
24337 NAME 2_5.8_Tracheophyta_58S_start_three_long
24338 LENG 45
24339 ALPH DNA
24340 RF no
24341 CS no
24342 MAP yes
24343 DATE Fri Feb 17 15:55:24 2012
24344 NSEQ 2
24345 EFFN 2.000000
24346 CKSUM 3870492215
24347 STATS LOCAL MSV -7.3319 0.72969
24348 STATS LOCAL VITERBI -8.2230 0.72969
24349 STATS LOCAL FORWARD -3.4162 0.72969
24350 HMM A C G T
24351 m->m m->i m->d i->m i->i d->m d->d
24352 COMPO 1.26546 1.40829 1.55378 1.33987
24353 1.38629 1.38629 1.38629 1.38629
24354 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
24355 1 2.57915 2.25909 2.64442 0.28946 1 - -
24356 1.38629 1.38629 1.38629 1.38629
24357 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24358 2 2.53331 3.02441 0.20344 2.88069 2 - -
24359 1.38629 1.38629 1.38629 1.38629
24360 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24361 3 0.23862 2.84929 2.43386 2.70756 3 - -
24362 1.38629 1.38629 1.38629 1.38629
24363 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24364 4 2.81865 0.23582 2.88868 2.35662 4 - -
24365 1.38629 1.38629 1.38629 1.38629
24366 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24367 5 2.57915 2.25909 2.64442 0.28946 5 - -
24368 1.38629 1.38629 1.38629 1.38629
24369 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24370 6 2.81865 0.23582 2.88868 2.35662 6 - -
24371 1.38629 1.38629 1.38629 1.38629
24372 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24373 7 2.57915 2.25909 2.64442 0.28946 7 - -
24374 1.38629 1.38629 1.38629 1.38629
24375 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24376 8 2.57915 2.25909 2.64442 0.28946 8 - -
24377 1.38629 1.38629 1.38629 1.38629
24378 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24379 9 2.53331 3.02441 0.20344 2.88069 9 - -
24380 1.38629 1.38629 1.38629 1.38629
24381 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24382 10 2.53331 3.02441 0.20344 2.88069 10 - -
24383 1.38629 1.38629 1.38629 1.38629
24384 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24385 11 2.81865 0.23582 2.88868 2.35662 11 - -
24386 1.38629 1.38629 1.38629 1.38629
24387 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24388 12 0.23862 2.84929 2.43386 2.70756 12 - -
24389 1.38629 1.38629 1.38629 1.38629
24390 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24391 13 0.23862 2.84929 2.43386 2.70756 13 - -
24392 1.38629 1.38629 1.38629 1.38629
24393 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24394 14 2.15554 1.00938 2.23102 0.88601 14 - -
24395 1.38629 1.38629 1.38629 1.38629
24396 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24397 15 2.53331 3.02441 0.20344 2.88069 15 - -
24398 1.38629 1.38629 1.38629 1.38629
24399 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24400 16 2.53331 3.02441 0.20344 2.88069 16 - -
24401 1.38629 1.38629 1.38629 1.38629
24402 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24403 17 0.23862 2.84929 2.43386 2.70756 17 - -
24404 1.38629 1.38629 1.38629 1.38629
24405 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24406 18 2.57915 2.25909 2.64442 0.28946 18 - -
24407 1.38629 1.38629 1.38629 1.38629
24408 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24409 19 0.23862 2.84929 2.43386 2.70756 19 - -
24410 1.38629 1.38629 1.38629 1.38629
24411 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24412 20 2.57915 2.25909 2.64442 0.28946 20 - -
24413 1.38629 1.38629 1.38629 1.38629
24414 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24415 21 2.81865 0.23582 2.88868 2.35662 21 - -
24416 1.38629 1.38629 1.38629 1.38629
24417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24418 22 2.57915 2.25909 2.64442 0.28946 22 - -
24419 1.38629 1.38629 1.38629 1.38629
24420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24421 23 2.81865 0.23582 2.88868 2.35662 23 - -
24422 1.38629 1.38629 1.38629 1.38629
24423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24424 24 0.23862 2.84929 2.43386 2.70756 24 - -
24425 1.38629 1.38629 1.38629 1.38629
24426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24427 25 2.53331 3.02441 0.20344 2.88069 25 - -
24428 1.38629 1.38629 1.38629 1.38629
24429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24430 26 0.23862 2.84929 2.43386 2.70756 26 - -
24431 1.38629 1.38629 1.38629 1.38629
24432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24433 27 2.57915 2.25909 2.64442 0.28946 27 - -
24434 1.38629 1.38629 1.38629 1.38629
24435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24436 28 2.81865 0.23582 2.88868 2.35662 28 - -
24437 1.38629 1.38629 1.38629 1.38629
24438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24439 29 2.57915 2.25909 2.64442 0.28946 29 - -
24440 1.38629 1.38629 1.38629 1.38629
24441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24442 30 2.81865 0.23582 2.88868 2.35662 30 - -
24443 1.38629 1.38629 1.38629 1.38629
24444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24445 31 0.23862 2.84929 2.43386 2.70756 31 - -
24446 1.38629 1.38629 1.38629 1.38629
24447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24448 32 1.01448 1.11006 1.95471 1.79419 32 - -
24449 1.38629 1.38629 1.38629 1.38629
24450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24451 33 2.81865 0.23582 2.88868 2.35662 33 - -
24452 1.38629 1.38629 1.38629 1.38629
24453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24454 34 2.81865 0.23582 2.88868 2.35662 34 - -
24455 1.38629 1.38629 1.38629 1.38629
24456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24457 35 2.81865 0.23582 2.88868 2.35662 35 - -
24458 1.38629 1.38629 1.38629 1.38629
24459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24460 36 2.57915 2.25909 2.64442 0.28946 36 - -
24461 1.38629 1.38629 1.38629 1.38629
24462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24463 37 0.23862 2.84929 2.43386 2.70756 37 - -
24464 1.38629 1.38629 1.38629 1.38629
24465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24466 38 2.57915 2.25909 2.64442 0.28946 38 - -
24467 1.38629 1.38629 1.38629 1.38629
24468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24469 39 2.53331 3.02441 0.20344 2.88069 39 - -
24470 1.38629 1.38629 1.38629 1.38629
24471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24472 40 0.23862 2.84929 2.43386 2.70756 40 - -
24473 1.38629 1.38629 1.38629 1.38629
24474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24475 41 0.23862 2.84929 2.43386 2.70756 41 - -
24476 1.38629 1.38629 1.38629 1.38629
24477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24478 42 2.53331 3.02441 0.20344 2.88069 42 - -
24479 1.38629 1.38629 1.38629 1.38629
24480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24481 43 0.23862 2.84929 2.43386 2.70756 43 - -
24482 1.38629 1.38629 1.38629 1.38629
24483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24484 44 0.23862 2.84929 2.43386 2.70756 44 - -
24485 1.38629 1.38629 1.38629 1.38629
24486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24487 45 2.57915 2.25909 2.64442 0.28946 45 - -
24488 1.38629 1.38629 1.38629 1.38629
24489 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
24490 //
24491 HMMER3/b [3.0 | March 2010]
24492 NAME 2_5.8_Tracheophyta_58S_start_twelve_long
24493 LENG 45
24494 ALPH DNA
24495 RF no
24496 CS no
24497 MAP yes
24498 DATE Fri Feb 17 16:15:47 2012
24499 NSEQ 2
24500 EFFN 2.000000
24501 CKSUM 3193425339
24502 STATS LOCAL MSV -7.4743 0.72839
24503 STATS LOCAL VITERBI -8.4610 0.72839
24504 STATS LOCAL FORWARD -3.5279 0.72839
24505 HMM A C G T
24506 m->m m->i m->d i->m i->i d->m d->d
24507 COMPO 1.18443 1.58899 1.49130 1.32852
24508 1.38629 1.38629 1.38629 1.38629
24509 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
24510 1 0.23862 2.84929 2.43386 2.70756 1 - -
24511 1.38629 1.38629 1.38629 1.38629
24512 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24513 2 0.23862 2.84929 2.43386 2.70756 2 - -
24514 1.38629 1.38629 1.38629 1.38629
24515 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24516 3 0.23862 2.84929 2.43386 2.70756 3 - -
24517 1.38629 1.38629 1.38629 1.38629
24518 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24519 4 2.57915 2.25909 2.64442 0.28946 4 - -
24520 1.38629 1.38629 1.38629 1.38629
24521 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24522 5 2.57915 2.25909 2.64442 0.28946 5 - -
24523 1.38629 1.38629 1.38629 1.38629
24524 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24525 6 2.57915 2.25909 2.64442 0.28946 6 - -
24526 1.38629 1.38629 1.38629 1.38629
24527 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24528 7 2.57915 2.25909 2.64442 0.28946 7 - -
24529 1.38629 1.38629 1.38629 1.38629
24530 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24531 8 2.81865 0.23582 2.88868 2.35662 8 - -
24532 1.38629 1.38629 1.38629 1.38629
24533 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24534 9 0.23862 2.84929 2.43386 2.70756 9 - -
24535 1.38629 1.38629 1.38629 1.38629
24536 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24537 10 0.23862 2.84929 2.43386 2.70756 10 - -
24538 1.38629 1.38629 1.38629 1.38629
24539 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24540 11 2.81865 0.23582 2.88868 2.35662 11 - -
24541 1.38629 1.38629 1.38629 1.38629
24542 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24543 12 2.53331 3.02441 0.20344 2.88069 12 - -
24544 1.38629 1.38629 1.38629 1.38629
24545 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24546 13 0.23862 2.84929 2.43386 2.70756 13 - -
24547 1.38629 1.38629 1.38629 1.38629
24548 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24549 14 2.57915 2.25909 2.64442 0.28946 14 - -
24550 1.38629 1.38629 1.38629 1.38629
24551 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24552 15 2.53331 3.02441 0.20344 2.88069 15 - -
24553 1.38629 1.38629 1.38629 1.38629
24554 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24555 16 2.53331 3.02441 0.20344 2.88069 16 - -
24556 1.38629 1.38629 1.38629 1.38629
24557 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24558 17 0.23862 2.84929 2.43386 2.70756 17 - -
24559 1.38629 1.38629 1.38629 1.38629
24560 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24561 18 2.57915 2.25909 2.64442 0.28946 18 - -
24562 1.38629 1.38629 1.38629 1.38629
24563 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24564 19 0.23862 2.84929 2.43386 2.70756 19 - -
24565 1.38629 1.38629 1.38629 1.38629
24566 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24567 20 2.57915 2.25909 2.64442 0.28946 20 - -
24568 1.38629 1.38629 1.38629 1.38629
24569 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24570 21 2.81865 0.23582 2.88868 2.35662 21 - -
24571 1.38629 1.38629 1.38629 1.38629
24572 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24573 22 2.57915 2.25909 2.64442 0.28946 22 - -
24574 1.38629 1.38629 1.38629 1.38629
24575 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24576 23 2.57915 2.25909 2.64442 0.28946 23 - -
24577 1.38629 1.38629 1.38629 1.38629
24578 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24579 24 2.53331 3.02441 0.20344 2.88069 24 - -
24580 1.38629 1.38629 1.38629 1.38629
24581 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24582 25 2.53331 3.02441 0.20344 2.88069 25 - -
24583 1.38629 1.38629 1.38629 1.38629
24584 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24585 26 2.57915 2.25909 2.64442 0.28946 26 - -
24586 1.38629 1.38629 1.38629 1.38629
24587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24588 27 2.57915 2.25909 2.64442 0.28946 27 - -
24589 1.38629 1.38629 1.38629 1.38629
24590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24591 28 2.81865 0.23582 2.88868 2.35662 28 - -
24592 1.38629 1.38629 1.38629 1.38629
24593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24594 29 2.81865 0.23582 2.88868 2.35662 29 - -
24595 1.38629 1.38629 1.38629 1.38629
24596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24597 30 2.81865 0.23582 2.88868 2.35662 30 - -
24598 1.38629 1.38629 1.38629 1.38629
24599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24600 31 0.23862 2.84929 2.43386 2.70756 31 - -
24601 1.38629 1.38629 1.38629 1.38629
24602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24603 32 2.57915 2.25909 2.64442 0.28946 32 - -
24604 1.38629 1.38629 1.38629 1.38629
24605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24606 33 0.23862 2.84929 2.43386 2.70756 33 - -
24607 1.38629 1.38629 1.38629 1.38629
24608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24609 34 0.23862 2.84929 2.43386 2.70756 34 - -
24610 1.38629 1.38629 1.38629 1.38629
24611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24612 35 2.81865 0.23582 2.88868 2.35662 35 - -
24613 1.38629 1.38629 1.38629 1.38629
24614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24615 36 2.53331 3.02441 0.20344 2.88069 36 - -
24616 1.38629 1.38629 1.38629 1.38629
24617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24618 37 0.23862 2.84929 2.43386 2.70756 37 - -
24619 1.38629 1.38629 1.38629 1.38629
24620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24621 38 2.57915 2.25909 2.64442 0.28946 38 - -
24622 1.38629 1.38629 1.38629 1.38629
24623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24624 39 2.53331 3.02441 0.20344 2.88069 39 - -
24625 1.38629 1.38629 1.38629 1.38629
24626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24627 40 0.23862 2.84929 2.43386 2.70756 40 - -
24628 1.38629 1.38629 1.38629 1.38629
24629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24630 41 0.23862 2.84929 2.43386 2.70756 41 - -
24631 1.38629 1.38629 1.38629 1.38629
24632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24633 42 2.53331 3.02441 0.20344 2.88069 42 - -
24634 1.38629 1.38629 1.38629 1.38629
24635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24636 43 0.23862 2.84929 2.43386 2.70756 43 - -
24637 1.38629 1.38629 1.38629 1.38629
24638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24639 44 2.53331 3.02441 0.20344 2.88069 44 - -
24640 1.38629 1.38629 1.38629 1.38629
24641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24642 45 2.81865 0.23582 2.88868 2.35662 45 - -
24643 1.38629 1.38629 1.38629 1.38629
24644 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
24645 //
24646 HMMER3/b [3.0 | March 2010]
24647 NAME 2_5.8_Tracheophyta_58S_start_two_long
24648 LENG 45
24649 ALPH DNA
24650 RF no
24651 CS no
24652 MAP yes
24653 DATE Fri Feb 17 15:55:14 2012
24654 NSEQ 33
24655 EFFN 4.088745
24656 CKSUM 2745058666
24657 STATS LOCAL MSV -7.3007 0.71933
24658 STATS LOCAL VITERBI -7.4981 0.71933
24659 STATS LOCAL FORWARD -4.0745 0.71933
24660 HMM A C G T
24661 m->m m->i m->d i->m i->i d->m d->d
24662 COMPO 1.24255 1.32691 1.51870 1.48254
24663 1.38629 1.38629 1.38629 1.38629
24664 0.03232 4.14135 4.14135 1.46634 0.26236 0.00000 *
24665 1 3.08151 0.26039 3.14187 1.96496 1 - -
24666 1.38629 1.38629 1.38629 1.38629
24667 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24668 2 2.24934 2.22887 0.33370 2.65056 2 - -
24669 1.38629 1.38629 1.38629 1.38629
24670 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24671 3 0.11631 3.59700 2.94148 3.51985 3 - -
24672 1.38629 1.38629 1.38629 1.38629
24673 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24674 4 3.68053 0.10420 3.71889 3.00607 4 - -
24675 1.38629 1.38629 1.38629 1.38629
24676 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24677 5 3.31305 2.73756 3.35243 0.14634 5 - -
24678 1.38629 1.38629 1.38629 1.38629
24679 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24680 6 3.68053 0.10420 3.71889 3.00607 6 - -
24681 1.38629 1.38629 1.38629 1.38629
24682 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24683 7 3.31305 2.73756 3.35243 0.14634 7 - -
24684 1.38629 1.38629 1.38629 1.38629
24685 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24686 8 3.68053 0.10420 3.71889 3.00607 8 - -
24687 1.38629 1.38629 1.38629 1.38629
24688 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24689 9 0.11631 3.59700 2.94148 3.51985 9 - -
24690 1.38629 1.38629 1.38629 1.38629
24691 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24692 10 1.36081 2.35748 0.58452 2.39123 10 - -
24693 1.38629 1.38629 1.38629 1.38629
24694 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24695 11 3.68053 0.10420 3.71889 3.00607 11 - -
24696 1.38629 1.38629 1.38629 1.38629
24697 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24698 12 0.11631 3.59700 2.94148 3.51985 12 - -
24699 1.38629 1.38629 1.38629 1.38629
24700 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24701 13 0.11631 3.59700 2.94148 3.51985 13 - -
24702 1.38629 1.38629 1.38629 1.38629
24703 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24704 14 2.99284 0.29746 3.05557 1.83222 14 - -
24705 1.38629 1.38629 1.38629 1.38629
24706 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24707 15 1.64325 2.96875 0.36128 2.83874 15 - -
24708 1.38629 1.38629 1.38629 1.38629
24709 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24710 16 2.61746 3.59547 0.13977 3.50636 16 - -
24711 1.38629 1.38629 1.38629 1.38629
24712 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24713 17 0.11631 3.59700 2.94148 3.51985 17 - -
24714 1.38629 1.38629 1.38629 1.38629
24715 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24716 18 3.31305 2.73756 3.35243 0.14634 18 - -
24717 1.38629 1.38629 1.38629 1.38629
24718 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24719 19 0.11631 3.59700 2.94148 3.51985 19 - -
24720 1.38629 1.38629 1.38629 1.38629
24721 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24722 20 3.31305 2.73756 3.35243 0.14634 20 - -
24723 1.38629 1.38629 1.38629 1.38629
24724 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24725 21 3.68053 0.10420 3.71889 3.00607 21 - -
24726 1.38629 1.38629 1.38629 1.38629
24727 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24728 22 3.31305 2.73756 3.35243 0.14634 22 - -
24729 1.38629 1.38629 1.38629 1.38629
24730 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24731 23 3.31305 2.73756 3.35243 0.14634 23 - -
24732 1.38629 1.38629 1.38629 1.38629
24733 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24734 24 3.09344 3.80283 0.09610 3.73076 24 - -
24735 1.38629 1.38629 1.38629 1.38629
24736 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24737 25 3.09344 3.80283 0.09610 3.73076 25 - -
24738 1.38629 1.38629 1.38629 1.38629
24739 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24740 26 3.68053 0.10420 3.71889 3.00607 26 - -
24741 1.38629 1.38629 1.38629 1.38629
24742 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24743 27 3.31305 2.73756 3.35243 0.14634 27 - -
24744 1.38629 1.38629 1.38629 1.38629
24745 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24746 28 3.68053 0.10420 3.71889 3.00607 28 - -
24747 1.38629 1.38629 1.38629 1.38629
24748 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24749 29 3.06578 2.13738 3.11637 0.23433 29 - -
24750 1.38629 1.38629 1.38629 1.38629
24751 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24752 30 2.99489 1.99380 3.04848 0.26612 30 - -
24753 1.38629 1.38629 1.38629 1.38629
24754 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24755 31 3.09344 3.80283 0.09610 3.73076 31 - -
24756 1.38629 1.38629 1.38629 1.38629
24757 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24758 32 3.68053 0.10420 3.71889 3.00607 32 - -
24759 1.38629 1.38629 1.38629 1.38629
24760 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24761 33 0.26910 2.27149 2.63136 2.80031 33 - -
24762 1.38629 1.38629 1.38629 1.38629
24763 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24764 34 0.11631 3.59700 2.94148 3.51985 34 - -
24765 1.38629 1.38629 1.38629 1.38629
24766 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24767 35 2.77040 0.31631 2.50093 2.06733 35 - -
24768 1.38629 1.38629 1.38629 1.38629
24769 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24770 36 3.09344 3.80283 0.09610 3.73076 36 - -
24771 1.38629 1.38629 1.38629 1.38629
24772 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24773 37 0.11631 3.59700 2.94148 3.51985 37 - -
24774 1.38629 1.38629 1.38629 1.38629
24775 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24776 38 3.31305 2.73756 3.35243 0.14634 38 - -
24777 1.38629 1.38629 1.38629 1.38629
24778 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24779 39 3.09344 3.80283 0.09610 3.73076 39 - -
24780 1.38629 1.38629 1.38629 1.38629
24781 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24782 40 0.11631 3.59700 2.94148 3.51985 40 - -
24783 1.38629 1.38629 1.38629 1.38629
24784 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24785 41 0.11631 3.59700 2.94148 3.51985 41 - -
24786 1.38629 1.38629 1.38629 1.38629
24787 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24788 42 3.09344 3.80283 0.09610 3.73076 42 - -
24789 1.38629 1.38629 1.38629 1.38629
24790 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24791 43 0.11631 3.59700 2.94148 3.51985 43 - -
24792 1.38629 1.38629 1.38629 1.38629
24793 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24794 44 0.11631 3.59700 2.94148 3.51985 44 - -
24795 1.38629 1.38629 1.38629 1.38629
24796 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547
24797 45 3.68053 0.10420 3.71889 3.00607 45 - -
24798 1.38629 1.38629 1.38629 1.38629
24799 0.01629 4.12532 * 1.46634 0.26236 0.00000 *
24800 //
24801 HMMER3/b [3.0 | March 2010]
24802 NAME 4_LSU_Tracheophyta_4_LSU_start_eight_long
24803 LENG 45
24804 ALPH DNA
24805 RF no
24806 CS no
24807 MAP yes
24808 DATE Sun Feb 19 00:11:54 2012
24809 NSEQ 2
24810 EFFN 2.000000
24811 CKSUM 4159611321
24812 STATS LOCAL MSV -7.6630 0.72772
24813 STATS LOCAL VITERBI -8.2445 0.72772
24814 STATS LOCAL FORWARD -3.1773 0.72772
24815 HMM A C G T
24816 m->m m->i m->d i->m i->i d->m d->d
24817 COMPO 1.39536 1.28586 1.21082 1.72659
24818 1.38629 1.38629 1.38629 1.38629
24819 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
24820 1 0.23862 2.84929 2.43386 2.70756 1 - -
24821 1.38629 1.38629 1.38629 1.38629
24822 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24823 2 2.57915 2.25909 2.64442 0.28946 2 - -
24824 1.38629 1.38629 1.38629 1.38629
24825 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24826 3 2.53331 3.02441 0.20344 2.88069 3 - -
24827 1.38629 1.38629 1.38629 1.38629
24828 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24829 4 2.81865 0.23582 2.88868 2.35662 4 - -
24830 1.38629 1.38629 1.38629 1.38629
24831 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24832 5 2.53331 3.02441 0.20344 2.88069 5 - -
24833 1.38629 1.38629 1.38629 1.38629
24834 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24835 6 0.23862 2.84929 2.43386 2.70756 6 - -
24836 1.38629 1.38629 1.38629 1.38629
24837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24838 7 2.81865 0.23582 2.88868 2.35662 7 - -
24839 1.38629 1.38629 1.38629 1.38629
24840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24841 8 2.81865 0.23582 2.88868 2.35662 8 - -
24842 1.38629 1.38629 1.38629 1.38629
24843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24844 9 2.81865 0.23582 2.88868 2.35662 9 - -
24845 1.38629 1.38629 1.38629 1.38629
24846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24847 10 2.81865 0.23582 2.88868 2.35662 10 - -
24848 1.38629 1.38629 1.38629 1.38629
24849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24850 11 0.23862 2.84929 2.43386 2.70756 11 - -
24851 1.38629 1.38629 1.38629 1.38629
24852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24853 12 2.53331 3.02441 0.20344 2.88069 12 - -
24854 1.38629 1.38629 1.38629 1.38629
24855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24856 13 2.53331 3.02441 0.20344 2.88069 13 - -
24857 1.38629 1.38629 1.38629 1.38629
24858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24859 14 0.23862 2.84929 2.43386 2.70756 14 - -
24860 1.38629 1.38629 1.38629 1.38629
24861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24862 15 2.57915 2.25909 2.64442 0.28946 15 - -
24863 1.38629 1.38629 1.38629 1.38629
24864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24865 16 2.53331 3.02441 0.20344 2.88069 16 - -
24866 1.38629 1.38629 1.38629 1.38629
24867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24868 17 2.53331 3.02441 0.20344 2.88069 17 - -
24869 1.38629 1.38629 1.38629 1.38629
24870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24871 18 2.53331 3.02441 0.20344 2.88069 18 - -
24872 1.38629 1.38629 1.38629 1.38629
24873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24874 19 2.81865 0.23582 2.88868 2.35662 19 - -
24875 1.38629 1.38629 1.38629 1.38629
24876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24877 20 2.53331 3.02441 0.20344 2.88069 20 - -
24878 1.38629 1.38629 1.38629 1.38629
24879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24880 21 0.23862 2.84929 2.43386 2.70756 21 - -
24881 1.38629 1.38629 1.38629 1.38629
24882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24883 22 2.53331 3.02441 0.20344 2.88069 22 - -
24884 1.38629 1.38629 1.38629 1.38629
24885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24886 23 2.53331 3.02441 0.20344 2.88069 23 - -
24887 1.38629 1.38629 1.38629 1.38629
24888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24889 24 2.81865 0.23582 2.88868 2.35662 24 - -
24890 1.38629 1.38629 1.38629 1.38629
24891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24892 25 2.81865 0.23582 2.88868 2.35662 25 - -
24893 1.38629 1.38629 1.38629 1.38629
24894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24895 26 0.23862 2.84929 2.43386 2.70756 26 - -
24896 1.38629 1.38629 1.38629 1.38629
24897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24898 27 2.81865 0.23582 2.88868 2.35662 27 - -
24899 1.38629 1.38629 1.38629 1.38629
24900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24901 28 2.81865 0.23582 2.88868 2.35662 28 - -
24902 1.38629 1.38629 1.38629 1.38629
24903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24904 29 2.81865 0.23582 2.88868 2.35662 29 - -
24905 1.38629 1.38629 1.38629 1.38629
24906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24907 30 2.53331 3.02441 0.20344 2.88069 30 - -
24908 1.38629 1.38629 1.38629 1.38629
24909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24910 31 2.81865 0.23582 2.88868 2.35662 31 - -
24911 1.38629 1.38629 1.38629 1.38629
24912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24913 32 2.15554 1.00938 2.23102 0.88601 32 - -
24914 1.38629 1.38629 1.38629 1.38629
24915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24916 33 2.53331 3.02441 0.20344 2.88069 33 - -
24917 1.38629 1.38629 1.38629 1.38629
24918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24919 34 0.23862 2.84929 2.43386 2.70756 34 - -
24920 1.38629 1.38629 1.38629 1.38629
24921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24922 35 2.53331 3.02441 0.20344 2.88069 35 - -
24923 1.38629 1.38629 1.38629 1.38629
24924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24925 36 2.57915 2.25909 2.64442 0.28946 36 - -
24926 1.38629 1.38629 1.38629 1.38629
24927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24928 37 2.57915 2.25909 2.64442 0.28946 37 - -
24929 1.38629 1.38629 1.38629 1.38629
24930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24931 38 2.57915 2.25909 2.64442 0.28946 38 - -
24932 1.38629 1.38629 1.38629 1.38629
24933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24934 39 0.23862 2.84929 2.43386 2.70756 39 - -
24935 1.38629 1.38629 1.38629 1.38629
24936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24937 40 0.23862 2.84929 2.43386 2.70756 40 - -
24938 1.38629 1.38629 1.38629 1.38629
24939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24940 41 2.53331 3.02441 0.20344 2.88069 41 - -
24941 1.38629 1.38629 1.38629 1.38629
24942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24943 42 2.81865 0.23582 2.88868 2.35662 42 - -
24944 1.38629 1.38629 1.38629 1.38629
24945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24946 43 0.23862 2.84929 2.43386 2.70756 43 - -
24947 1.38629 1.38629 1.38629 1.38629
24948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24949 44 2.57915 2.25909 2.64442 0.28946 44 - -
24950 1.38629 1.38629 1.38629 1.38629
24951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
24952 45 0.23862 2.84929 2.43386 2.70756 45 - -
24953 1.38629 1.38629 1.38629 1.38629
24954 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
24955 //
24956 HMMER3/b [3.0 | March 2010]
24957 NAME 4_LSU_Tracheophyta_4_LSU_start_eighteen_long
24958 LENG 45
24959 ALPH DNA
24960 RF no
24961 CS no
24962 MAP yes
24963 DATE Sun Feb 19 00:20:42 2012
24964 NSEQ 33
24965 EFFN 3.331421
24966 CKSUM 3818006769
24967 STATS LOCAL MSV -8.2061 0.71933
24968 STATS LOCAL VITERBI -7.9142 0.71933
24969 STATS LOCAL FORWARD -3.6602 0.71933
24970 HMM A C G T
24971 m->m m->i m->d i->m i->i d->m d->d
24972 COMPO 1.33233 1.18916 1.25067 1.92862
24973 1.38629 1.38629 1.38629 1.38629
24974 0.03683 4.01303 4.01303 1.46634 0.26236 0.00000 *
24975 1 0.14153 3.38306 2.80374 3.28498 1 - -
24976 1.38629 1.38629 1.38629 1.38629
24977 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24978 2 2.57793 1.52098 2.64414 0.45491 2 - -
24979 1.38629 1.38629 1.38629 1.38629
24980 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24981 3 2.94948 3.59059 0.11685 3.49555 3 - -
24982 1.38629 1.38629 1.38629 1.38629
24983 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24984 4 3.43633 0.12982 3.48565 2.83134 4 - -
24985 1.38629 1.38629 1.38629 1.38629
24986 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24987 5 2.94948 3.59059 0.11685 3.49555 5 - -
24988 1.38629 1.38629 1.38629 1.38629
24989 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24990 6 0.14153 3.38306 2.80374 3.28498 6 - -
24991 1.38629 1.38629 1.38629 1.38629
24992 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24993 7 3.43633 0.12982 3.48565 2.83134 7 - -
24994 1.38629 1.38629 1.38629 1.38629
24995 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24996 8 3.43633 0.12982 3.48565 2.83134 8 - -
24997 1.38629 1.38629 1.38629 1.38629
24998 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
24999 9 3.43633 0.12982 3.48565 2.83134 9 - -
25000 1.38629 1.38629 1.38629 1.38629
25001 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25002 10 3.43633 0.12982 3.48565 2.83134 10 - -
25003 1.38629 1.38629 1.38629 1.38629
25004 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25005 11 0.14153 3.38306 2.80374 3.28498 11 - -
25006 1.38629 1.38629 1.38629 1.38629
25007 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25008 12 2.94948 3.59059 0.11685 3.49555 12 - -
25009 1.38629 1.38629 1.38629 1.38629
25010 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25011 13 2.94948 3.59059 0.11685 3.49555 13 - -
25012 1.38629 1.38629 1.38629 1.38629
25013 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25014 14 0.14153 3.38306 2.80374 3.28498 14 - -
25015 1.38629 1.38629 1.38629 1.38629
25016 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25017 15 2.41105 1.01266 2.48283 0.76891 15 - -
25018 1.38629 1.38629 1.38629 1.38629
25019 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25020 16 2.94948 3.59059 0.11685 3.49555 16 - -
25021 1.38629 1.38629 1.38629 1.38629
25022 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25023 17 2.94948 3.59059 0.11685 3.49555 17 - -
25024 1.38629 1.38629 1.38629 1.38629
25025 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25026 18 2.81354 3.03622 0.16108 3.19986 18 - -
25027 1.38629 1.38629 1.38629 1.38629
25028 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25029 19 3.43633 0.12982 3.48565 2.83134 19 - -
25030 1.38629 1.38629 1.38629 1.38629
25031 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25032 20 2.94948 3.59059 0.11685 3.49555 20 - -
25033 1.38629 1.38629 1.38629 1.38629
25034 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25035 21 0.14153 3.38306 2.80374 3.28498 21 - -
25036 1.38629 1.38629 1.38629 1.38629
25037 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25038 22 2.94948 3.59059 0.11685 3.49555 22 - -
25039 1.38629 1.38629 1.38629 1.38629
25040 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25041 23 0.14153 3.38306 2.80374 3.28498 23 - -
25042 1.38629 1.38629 1.38629 1.38629
25043 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25044 24 3.43633 0.12982 3.48565 2.83134 24 - -
25045 1.38629 1.38629 1.38629 1.38629
25046 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25047 25 3.43633 0.12982 3.48565 2.83134 25 - -
25048 1.38629 1.38629 1.38629 1.38629
25049 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25050 26 0.14153 3.38306 2.80374 3.28498 26 - -
25051 1.38629 1.38629 1.38629 1.38629
25052 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25053 27 3.43633 0.12982 3.48565 2.83134 27 - -
25054 1.38629 1.38629 1.38629 1.38629
25055 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25056 28 3.43633 0.12982 3.48565 2.83134 28 - -
25057 1.38629 1.38629 1.38629 1.38629
25058 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25059 29 3.43633 0.12982 3.48565 2.83134 29 - -
25060 1.38629 1.38629 1.38629 1.38629
25061 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25062 30 2.94948 3.59059 0.11685 3.49555 30 - -
25063 1.38629 1.38629 1.38629 1.38629
25064 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25065 31 3.43633 0.12982 3.48565 2.83134 31 - -
25066 1.38629 1.38629 1.38629 1.38629
25067 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25068 32 3.17556 0.19247 3.23275 2.36594 32 - -
25069 1.38629 1.38629 1.38629 1.38629
25070 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25071 33 2.94948 3.59059 0.11685 3.49555 33 - -
25072 1.38629 1.38629 1.38629 1.38629
25073 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25074 34 0.14153 3.38306 2.80374 3.28498 34 - -
25075 1.38629 1.38629 1.38629 1.38629
25076 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25077 35 2.94948 3.59059 0.11685 3.49555 35 - -
25078 1.38629 1.38629 1.38629 1.38629
25079 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25080 36 3.09143 2.59694 3.13948 0.17822 36 - -
25081 1.38629 1.38629 1.38629 1.38629
25082 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25083 37 3.09143 2.59694 3.13948 0.17822 37 - -
25084 1.38629 1.38629 1.38629 1.38629
25085 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25086 38 3.09143 2.59694 3.13948 0.17822 38 - -
25087 1.38629 1.38629 1.38629 1.38629
25088 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25089 39 0.14153 3.38306 2.80374 3.28498 39 - -
25090 1.38629 1.38629 1.38629 1.38629
25091 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25092 40 0.14153 3.38306 2.80374 3.28498 40 - -
25093 1.38629 1.38629 1.38629 1.38629
25094 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25095 41 2.94948 3.59059 0.11685 3.49555 41 - -
25096 1.38629 1.38629 1.38629 1.38629
25097 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25098 42 3.43633 0.12982 3.48565 2.83134 42 - -
25099 1.38629 1.38629 1.38629 1.38629
25100 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25101 43 0.14153 3.38306 2.80374 3.28498 43 - -
25102 1.38629 1.38629 1.38629 1.38629
25103 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25104 44 3.09143 2.59694 3.13948 0.17822 44 - -
25105 1.38629 1.38629 1.38629 1.38629
25106 0.03683 4.01303 4.01303 1.46634 0.26236 1.09861 0.40547
25107 45 0.14153 3.38306 2.80374 3.28498 45 - -
25108 1.38629 1.38629 1.38629 1.38629
25109 0.01858 3.99479 * 1.46634 0.26236 0.00000 *
25110 //
25111 HMMER3/b [3.0 | March 2010]
25112 NAME 4_LSU_Tracheophyta_4_LSU_start_elevena_long
25113 LENG 45
25114 ALPH DNA
25115 RF no
25116 CS no
25117 MAP yes
25118 DATE Sun Feb 19 00:14:33 2012
25119 NSEQ 2
25120 EFFN 2.000000
25121 CKSUM 200537437
25122 STATS LOCAL MSV -7.4731 0.72765
25123 STATS LOCAL VITERBI -8.1305 0.72765
25124 STATS LOCAL FORWARD -3.3552 0.72765
25125 HMM A C G T
25126 m->m m->i m->d i->m i->i d->m d->d
25127 COMPO 1.40083 1.29332 1.32030 1.55025
25128 1.38629 1.38629 1.38629 1.38629
25129 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
25130 1 2.81865 0.23582 2.88868 2.35662 1 - -
25131 1.38629 1.38629 1.38629 1.38629
25132 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25133 2 2.81865 0.23582 2.88868 2.35662 2 - -
25134 1.38629 1.38629 1.38629 1.38629
25135 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25136 3 0.23862 2.84929 2.43386 2.70756 3 - -
25137 1.38629 1.38629 1.38629 1.38629
25138 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25139 4 2.57915 2.25909 2.64442 0.28946 4 - -
25140 1.38629 1.38629 1.38629 1.38629
25141 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25142 5 2.53331 3.02441 0.20344 2.88069 5 - -
25143 1.38629 1.38629 1.38629 1.38629
25144 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25145 6 0.23862 2.84929 2.43386 2.70756 6 - -
25146 1.38629 1.38629 1.38629 1.38629
25147 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25148 7 2.81865 0.23582 2.88868 2.35662 7 - -
25149 1.38629 1.38629 1.38629 1.38629
25150 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25151 8 2.81865 0.23582 2.88868 2.35662 8 - -
25152 1.38629 1.38629 1.38629 1.38629
25153 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25154 9 2.81865 0.23582 2.88868 2.35662 9 - -
25155 1.38629 1.38629 1.38629 1.38629
25156 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25157 10 2.81865 0.23582 2.88868 2.35662 10 - -
25158 1.38629 1.38629 1.38629 1.38629
25159 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25160 11 0.23862 2.84929 2.43386 2.70756 11 - -
25161 1.38629 1.38629 1.38629 1.38629
25162 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25163 12 2.53331 3.02441 0.20344 2.88069 12 - -
25164 1.38629 1.38629 1.38629 1.38629
25165 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25166 13 2.53331 3.02441 0.20344 2.88069 13 - -
25167 1.38629 1.38629 1.38629 1.38629
25168 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25169 14 2.57915 2.25909 2.64442 0.28946 14 - -
25170 1.38629 1.38629 1.38629 1.38629
25171 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25172 15 2.81865 0.23582 2.88868 2.35662 15 - -
25173 1.38629 1.38629 1.38629 1.38629
25174 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25175 16 0.23862 2.84929 2.43386 2.70756 16 - -
25176 1.38629 1.38629 1.38629 1.38629
25177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25178 17 2.53331 3.02441 0.20344 2.88069 17 - -
25179 1.38629 1.38629 1.38629 1.38629
25180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25181 18 2.53331 3.02441 0.20344 2.88069 18 - -
25182 1.38629 1.38629 1.38629 1.38629
25183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25184 19 2.81865 0.23582 2.88868 2.35662 19 - -
25185 1.38629 1.38629 1.38629 1.38629
25186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25187 20 2.53331 3.02441 0.20344 2.88069 20 - -
25188 1.38629 1.38629 1.38629 1.38629
25189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25190 21 2.53331 3.02441 0.20344 2.88069 21 - -
25191 1.38629 1.38629 1.38629 1.38629
25192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25193 22 2.53331 3.02441 0.20344 2.88069 22 - -
25194 1.38629 1.38629 1.38629 1.38629
25195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25196 23 0.23862 2.84929 2.43386 2.70756 23 - -
25197 1.38629 1.38629 1.38629 1.38629
25198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25199 24 2.57915 2.25909 2.64442 0.28946 24 - -
25200 1.38629 1.38629 1.38629 1.38629
25201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25202 25 2.57915 2.25909 2.64442 0.28946 25 - -
25203 1.38629 1.38629 1.38629 1.38629
25204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25205 26 0.23862 2.84929 2.43386 2.70756 26 - -
25206 1.38629 1.38629 1.38629 1.38629
25207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25208 27 2.81865 0.23582 2.88868 2.35662 27 - -
25209 1.38629 1.38629 1.38629 1.38629
25210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25211 28 2.81865 0.23582 2.88868 2.35662 28 - -
25212 1.38629 1.38629 1.38629 1.38629
25213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25214 29 2.81865 0.23582 2.88868 2.35662 29 - -
25215 1.38629 1.38629 1.38629 1.38629
25216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25217 30 2.53331 3.02441 0.20344 2.88069 30 - -
25218 1.38629 1.38629 1.38629 1.38629
25219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25220 31 2.81865 0.23582 2.88868 2.35662 31 - -
25221 1.38629 1.38629 1.38629 1.38629
25222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25223 32 2.57915 2.25909 2.64442 0.28946 32 - -
25224 1.38629 1.38629 1.38629 1.38629
25225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25226 33 2.53331 3.02441 0.20344 2.88069 33 - -
25227 1.38629 1.38629 1.38629 1.38629
25228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25229 34 0.23862 2.84929 2.43386 2.70756 34 - -
25230 1.38629 1.38629 1.38629 1.38629
25231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25232 35 2.53331 3.02441 0.20344 2.88069 35 - -
25233 1.38629 1.38629 1.38629 1.38629
25234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25235 36 2.57915 2.25909 2.64442 0.28946 36 - -
25236 1.38629 1.38629 1.38629 1.38629
25237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25238 37 2.57915 2.25909 2.64442 0.28946 37 - -
25239 1.38629 1.38629 1.38629 1.38629
25240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25241 38 2.57915 2.25909 2.64442 0.28946 38 - -
25242 1.38629 1.38629 1.38629 1.38629
25243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25244 39 0.23862 2.84929 2.43386 2.70756 39 - -
25245 1.38629 1.38629 1.38629 1.38629
25246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25247 40 0.23862 2.84929 2.43386 2.70756 40 - -
25248 1.38629 1.38629 1.38629 1.38629
25249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25250 41 2.53331 3.02441 0.20344 2.88069 41 - -
25251 1.38629 1.38629 1.38629 1.38629
25252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25253 42 2.81865 0.23582 2.88868 2.35662 42 - -
25254 1.38629 1.38629 1.38629 1.38629
25255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25256 43 0.23862 2.84929 2.43386 2.70756 43 - -
25257 1.38629 1.38629 1.38629 1.38629
25258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25259 44 2.57915 2.25909 2.64442 0.28946 44 - -
25260 1.38629 1.38629 1.38629 1.38629
25261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25262 45 0.23862 2.84929 2.43386 2.70756 45 - -
25263 1.38629 1.38629 1.38629 1.38629
25264 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
25265 //
25266 HMMER3/b [3.0 | March 2010]
25267 NAME 4_LSU_Tracheophyta_4_LSU_start_elevenb_long
25268 LENG 45
25269 ALPH DNA
25270 RF no
25271 CS no
25272 MAP yes
25273 DATE Sun Feb 19 00:14:40 2012
25274 NSEQ 2
25275 EFFN 2.000000
25276 CKSUM 4000050501
25277 STATS LOCAL MSV -7.5058 0.72832
25278 STATS LOCAL VITERBI -8.1521 0.72832
25279 STATS LOCAL FORWARD -3.3219 0.72832
25280 HMM A C G T
25281 m->m m->i m->d i->m i->i d->m d->d
25282 COMPO 1.34045 1.32657 1.37234 1.51698
25283 1.38629 1.38629 1.38629 1.38629
25284 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
25285 1 2.57915 2.25909 2.64442 0.28946 1 - -
25286 1.38629 1.38629 1.38629 1.38629
25287 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25288 2 2.81865 0.23582 2.88868 2.35662 2 - -
25289 1.38629 1.38629 1.38629 1.38629
25290 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25291 3 0.23862 2.84929 2.43386 2.70756 3 - -
25292 1.38629 1.38629 1.38629 1.38629
25293 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25294 4 2.57915 2.25909 2.64442 0.28946 4 - -
25295 1.38629 1.38629 1.38629 1.38629
25296 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25297 5 2.53331 3.02441 0.20344 2.88069 5 - -
25298 1.38629 1.38629 1.38629 1.38629
25299 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25300 6 0.23862 2.84929 2.43386 2.70756 6 - -
25301 1.38629 1.38629 1.38629 1.38629
25302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25303 7 2.81865 0.23582 2.88868 2.35662 7 - -
25304 1.38629 1.38629 1.38629 1.38629
25305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25306 8 2.81865 0.23582 2.88868 2.35662 8 - -
25307 1.38629 1.38629 1.38629 1.38629
25308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25309 9 2.81865 0.23582 2.88868 2.35662 9 - -
25310 1.38629 1.38629 1.38629 1.38629
25311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25312 10 2.81865 0.23582 2.88868 2.35662 10 - -
25313 1.38629 1.38629 1.38629 1.38629
25314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25315 11 0.23862 2.84929 2.43386 2.70756 11 - -
25316 1.38629 1.38629 1.38629 1.38629
25317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25318 12 2.53331 3.02441 0.20344 2.88069 12 - -
25319 1.38629 1.38629 1.38629 1.38629
25320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25321 13 2.53331 3.02441 0.20344 2.88069 13 - -
25322 1.38629 1.38629 1.38629 1.38629
25323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25324 14 2.57915 2.25909 2.64442 0.28946 14 - -
25325 1.38629 1.38629 1.38629 1.38629
25326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25327 15 2.81865 0.23582 2.88868 2.35662 15 - -
25328 1.38629 1.38629 1.38629 1.38629
25329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25330 16 0.23862 2.84929 2.43386 2.70756 16 - -
25331 1.38629 1.38629 1.38629 1.38629
25332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25333 17 2.53331 3.02441 0.20344 2.88069 17 - -
25334 1.38629 1.38629 1.38629 1.38629
25335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25336 18 0.23862 2.84929 2.43386 2.70756 18 - -
25337 1.38629 1.38629 1.38629 1.38629
25338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25339 19 2.81865 0.23582 2.88868 2.35662 19 - -
25340 1.38629 1.38629 1.38629 1.38629
25341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25342 20 2.53331 3.02441 0.20344 2.88069 20 - -
25343 1.38629 1.38629 1.38629 1.38629
25344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25345 21 2.53331 3.02441 0.20344 2.88069 21 - -
25346 1.38629 1.38629 1.38629 1.38629
25347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25348 22 2.53331 3.02441 0.20344 2.88069 22 - -
25349 1.38629 1.38629 1.38629 1.38629
25350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25351 23 0.23862 2.84929 2.43386 2.70756 23 - -
25352 1.38629 1.38629 1.38629 1.38629
25353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25354 24 2.15554 1.00938 2.23102 0.88601 24 - -
25355 1.38629 1.38629 1.38629 1.38629
25356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25357 25 2.57915 2.25909 2.64442 0.28946 25 - -
25358 1.38629 1.38629 1.38629 1.38629
25359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25360 26 0.23862 2.84929 2.43386 2.70756 26 - -
25361 1.38629 1.38629 1.38629 1.38629
25362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25363 27 2.81865 0.23582 2.88868 2.35662 27 - -
25364 1.38629 1.38629 1.38629 1.38629
25365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25366 28 2.81865 0.23582 2.88868 2.35662 28 - -
25367 1.38629 1.38629 1.38629 1.38629
25368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25369 29 2.81865 0.23582 2.88868 2.35662 29 - -
25370 1.38629 1.38629 1.38629 1.38629
25371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25372 30 2.53331 3.02441 0.20344 2.88069 30 - -
25373 1.38629 1.38629 1.38629 1.38629
25374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25375 31 2.81865 0.23582 2.88868 2.35662 31 - -
25376 1.38629 1.38629 1.38629 1.38629
25377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25378 32 2.57915 2.25909 2.64442 0.28946 32 - -
25379 1.38629 1.38629 1.38629 1.38629
25380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25381 33 2.53331 3.02441 0.20344 2.88069 33 - -
25382 1.38629 1.38629 1.38629 1.38629
25383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25384 34 0.23862 2.84929 2.43386 2.70756 34 - -
25385 1.38629 1.38629 1.38629 1.38629
25386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25387 35 2.53331 3.02441 0.20344 2.88069 35 - -
25388 1.38629 1.38629 1.38629 1.38629
25389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25390 36 2.57915 2.25909 2.64442 0.28946 36 - -
25391 1.38629 1.38629 1.38629 1.38629
25392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25393 37 2.57915 2.25909 2.64442 0.28946 37 - -
25394 1.38629 1.38629 1.38629 1.38629
25395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25396 38 2.57915 2.25909 2.64442 0.28946 38 - -
25397 1.38629 1.38629 1.38629 1.38629
25398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25399 39 0.23862 2.84929 2.43386 2.70756 39 - -
25400 1.38629 1.38629 1.38629 1.38629
25401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25402 40 0.23862 2.84929 2.43386 2.70756 40 - -
25403 1.38629 1.38629 1.38629 1.38629
25404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25405 41 2.53331 3.02441 0.20344 2.88069 41 - -
25406 1.38629 1.38629 1.38629 1.38629
25407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25408 42 2.81865 0.23582 2.88868 2.35662 42 - -
25409 1.38629 1.38629 1.38629 1.38629
25410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25411 43 0.23862 2.84929 2.43386 2.70756 43 - -
25412 1.38629 1.38629 1.38629 1.38629
25413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25414 44 2.57915 2.25909 2.64442 0.28946 44 - -
25415 1.38629 1.38629 1.38629 1.38629
25416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25417 45 0.23862 2.84929 2.43386 2.70756 45 - -
25418 1.38629 1.38629 1.38629 1.38629
25419 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
25420 //
25421 HMMER3/b [3.0 | March 2010]
25422 NAME 4_LSU_Tracheophyta_4_LSU_start_elevenc_long
25423 LENG 45
25424 ALPH DNA
25425 RF no
25426 CS no
25427 MAP yes
25428 DATE Sun Feb 19 00:14:47 2012
25429 NSEQ 6
25430 EFFN 3.295898
25431 CKSUM 3809853014
25432 STATS LOCAL MSV -8.2212 0.71931
25433 STATS LOCAL VITERBI -7.9664 0.71931
25434 STATS LOCAL FORWARD -3.6492 0.71931
25435 HMM A C G T
25436 m->m m->i m->d i->m i->i d->m d->d
25437 COMPO 1.33326 1.18308 1.24824 1.94465
25438 1.38629 1.38629 1.38629 1.38629
25439 0.03707 4.00659 4.00659 1.46634 0.26236 0.00000 *
25440 1 0.14304 3.37165 2.79633 3.27250 1 - -
25441 1.38629 1.38629 1.38629 1.38629
25442 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25443 2 2.40035 0.95194 2.47256 0.82336 2 - -
25444 1.38629 1.38629 1.38629 1.38629
25445 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25446 3 2.94151 3.57901 0.11812 3.48277 3 - -
25447 1.38629 1.38629 1.38629 1.38629
25448 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25449 4 3.42318 0.13140 3.47306 2.82176 4 - -
25450 1.38629 1.38629 1.38629 1.38629
25451 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25452 5 2.94151 3.57901 0.11812 3.48277 5 - -
25453 1.38629 1.38629 1.38629 1.38629
25454 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25455 6 0.14304 3.37165 2.79633 3.27250 6 - -
25456 1.38629 1.38629 1.38629 1.38629
25457 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25458 7 3.42318 0.13140 3.47306 2.82176 7 - -
25459 1.38629 1.38629 1.38629 1.38629
25460 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25461 8 3.42318 0.13140 3.47306 2.82176 8 - -
25462 1.38629 1.38629 1.38629 1.38629
25463 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25464 9 3.42318 0.13140 3.47306 2.82176 9 - -
25465 1.38629 1.38629 1.38629 1.38629
25466 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25467 10 3.42318 0.13140 3.47306 2.82176 10 - -
25468 1.38629 1.38629 1.38629 1.38629
25469 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25470 11 0.14304 3.37165 2.79633 3.27250 11 - -
25471 1.38629 1.38629 1.38629 1.38629
25472 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25473 12 2.94151 3.57901 0.11812 3.48277 12 - -
25474 1.38629 1.38629 1.38629 1.38629
25475 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25476 13 2.94151 3.57901 0.11812 3.48277 13 - -
25477 1.38629 1.38629 1.38629 1.38629
25478 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25479 14 0.14304 3.37165 2.79633 3.27250 14 - -
25480 1.38629 1.38629 1.38629 1.38629
25481 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25482 15 2.49506 1.35028 2.56376 0.54245 15 - -
25483 1.38629 1.38629 1.38629 1.38629
25484 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25485 16 2.94151 3.57901 0.11812 3.48277 16 - -
25486 1.38629 1.38629 1.38629 1.38629
25487 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25488 17 2.94151 3.57901 0.11812 3.48277 17 - -
25489 1.38629 1.38629 1.38629 1.38629
25490 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25491 18 2.94151 3.57901 0.11812 3.48277 18 - -
25492 1.38629 1.38629 1.38629 1.38629
25493 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25494 19 3.42318 0.13140 3.47306 2.82176 19 - -
25495 1.38629 1.38629 1.38629 1.38629
25496 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25497 20 2.94151 3.57901 0.11812 3.48277 20 - -
25498 1.38629 1.38629 1.38629 1.38629
25499 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25500 21 0.14304 3.37165 2.79633 3.27250 21 - -
25501 1.38629 1.38629 1.38629 1.38629
25502 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25503 22 2.94151 3.57901 0.11812 3.48277 22 - -
25504 1.38629 1.38629 1.38629 1.38629
25505 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25506 23 0.14304 3.37165 2.79633 3.27250 23 - -
25507 1.38629 1.38629 1.38629 1.38629
25508 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25509 24 3.42318 0.13140 3.47306 2.82176 24 - -
25510 1.38629 1.38629 1.38629 1.38629
25511 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25512 25 3.42318 0.13140 3.47306 2.82176 25 - -
25513 1.38629 1.38629 1.38629 1.38629
25514 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25515 26 0.14304 3.37165 2.79633 3.27250 26 - -
25516 1.38629 1.38629 1.38629 1.38629
25517 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25518 27 3.42318 0.13140 3.47306 2.82176 27 - -
25519 1.38629 1.38629 1.38629 1.38629
25520 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25521 28 3.42318 0.13140 3.47306 2.82176 28 - -
25522 1.38629 1.38629 1.38629 1.38629
25523 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25524 29 3.42318 0.13140 3.47306 2.82176 29 - -
25525 1.38629 1.38629 1.38629 1.38629
25526 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25527 30 2.94151 3.57901 0.11812 3.48277 30 - -
25528 1.38629 1.38629 1.38629 1.38629
25529 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25530 31 3.42318 0.13140 3.47306 2.82176 31 - -
25531 1.38629 1.38629 1.38629 1.38629
25532 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25533 32 3.42318 0.13140 3.47306 2.82176 32 - -
25534 1.38629 1.38629 1.38629 1.38629
25535 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25536 33 2.94151 3.57901 0.11812 3.48277 33 - -
25537 1.38629 1.38629 1.38629 1.38629
25538 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25539 34 0.14304 3.37165 2.79633 3.27250 34 - -
25540 1.38629 1.38629 1.38629 1.38629
25541 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25542 35 2.94151 3.57901 0.11812 3.48277 35 - -
25543 1.38629 1.38629 1.38629 1.38629
25544 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25545 36 3.07992 2.58962 3.12841 0.18008 36 - -
25546 1.38629 1.38629 1.38629 1.38629
25547 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25548 37 3.07992 2.58962 3.12841 0.18008 37 - -
25549 1.38629 1.38629 1.38629 1.38629
25550 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25551 38 3.07992 2.58962 3.12841 0.18008 38 - -
25552 1.38629 1.38629 1.38629 1.38629
25553 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25554 39 0.14304 3.37165 2.79633 3.27250 39 - -
25555 1.38629 1.38629 1.38629 1.38629
25556 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25557 40 0.14304 3.37165 2.79633 3.27250 40 - -
25558 1.38629 1.38629 1.38629 1.38629
25559 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25560 41 2.94151 3.57901 0.11812 3.48277 41 - -
25561 1.38629 1.38629 1.38629 1.38629
25562 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25563 42 3.42318 0.13140 3.47306 2.82176 42 - -
25564 1.38629 1.38629 1.38629 1.38629
25565 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25566 43 0.14304 3.37165 2.79633 3.27250 43 - -
25567 1.38629 1.38629 1.38629 1.38629
25568 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25569 44 3.07992 2.58962 3.12841 0.18008 44 - -
25570 1.38629 1.38629 1.38629 1.38629
25571 0.03707 4.00659 4.00659 1.46634 0.26236 1.09861 0.40547
25572 45 0.14304 3.37165 2.79633 3.27250 45 - -
25573 1.38629 1.38629 1.38629 1.38629
25574 0.01871 3.98822 * 1.46634 0.26236 0.00000 *
25575 //
25576 HMMER3/b [3.0 | March 2010]
25577 NAME 4_LSU_Tracheophyta_4_LSU_start_elevend_long
25578 LENG 45
25579 ALPH DNA
25580 RF no
25581 CS no
25582 MAP yes
25583 DATE Sun Feb 19 00:14:53 2012
25584 NSEQ 2
25585 EFFN 2.000000
25586 CKSUM 3816763266
25587 STATS LOCAL MSV -7.6158 0.72756
25588 STATS LOCAL VITERBI -8.0459 0.72756
25589 STATS LOCAL FORWARD -3.4869 0.72756
25590 HMM A C G T
25591 m->m m->i m->d i->m i->i d->m d->d
25592 COMPO 1.45842 1.29740 1.26599 1.55024
25593 1.38629 1.38629 1.38629 1.38629
25594 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
25595 1 0.23862 2.84929 2.43386 2.70756 1 - -
25596 1.38629 1.38629 1.38629 1.38629
25597 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25598 2 2.57915 2.25909 2.64442 0.28946 2 - -
25599 1.38629 1.38629 1.38629 1.38629
25600 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25601 3 2.53331 3.02441 0.20344 2.88069 3 - -
25602 1.38629 1.38629 1.38629 1.38629
25603 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25604 4 2.81865 0.23582 2.88868 2.35662 4 - -
25605 1.38629 1.38629 1.38629 1.38629
25606 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25607 5 2.53331 3.02441 0.20344 2.88069 5 - -
25608 1.38629 1.38629 1.38629 1.38629
25609 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25610 6 0.23862 2.84929 2.43386 2.70756 6 - -
25611 1.38629 1.38629 1.38629 1.38629
25612 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25613 7 2.81865 0.23582 2.88868 2.35662 7 - -
25614 1.38629 1.38629 1.38629 1.38629
25615 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25616 8 2.81865 0.23582 2.88868 2.35662 8 - -
25617 1.38629 1.38629 1.38629 1.38629
25618 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25619 9 2.57915 2.25909 2.64442 0.28946 9 - -
25620 1.38629 1.38629 1.38629 1.38629
25621 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25622 10 2.81865 0.23582 2.88868 2.35662 10 - -
25623 1.38629 1.38629 1.38629 1.38629
25624 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25625 11 0.23862 2.84929 2.43386 2.70756 11 - -
25626 1.38629 1.38629 1.38629 1.38629
25627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25628 12 2.53331 3.02441 0.20344 2.88069 12 - -
25629 1.38629 1.38629 1.38629 1.38629
25630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25631 13 2.81865 0.23582 2.88868 2.35662 13 - -
25632 1.38629 1.38629 1.38629 1.38629
25633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25634 14 2.57915 2.25909 2.64442 0.28946 14 - -
25635 1.38629 1.38629 1.38629 1.38629
25636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25637 15 2.81865 0.23582 2.88868 2.35662 15 - -
25638 1.38629 1.38629 1.38629 1.38629
25639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25640 16 0.23862 2.84929 2.43386 2.70756 16 - -
25641 1.38629 1.38629 1.38629 1.38629
25642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25643 17 2.53331 3.02441 0.20344 2.88069 17 - -
25644 1.38629 1.38629 1.38629 1.38629
25645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25646 18 2.53331 3.02441 0.20344 2.88069 18 - -
25647 1.38629 1.38629 1.38629 1.38629
25648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25649 19 2.81865 0.23582 2.88868 2.35662 19 - -
25650 1.38629 1.38629 1.38629 1.38629
25651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25652 20 2.53331 3.02441 0.20344 2.88069 20 - -
25653 1.38629 1.38629 1.38629 1.38629
25654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25655 21 2.53331 3.02441 0.20344 2.88069 21 - -
25656 1.38629 1.38629 1.38629 1.38629
25657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25658 22 2.53331 3.02441 0.20344 2.88069 22 - -
25659 1.38629 1.38629 1.38629 1.38629
25660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25661 23 2.53331 3.02441 0.20344 2.88069 23 - -
25662 1.38629 1.38629 1.38629 1.38629
25663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25664 24 2.81865 0.23582 2.88868 2.35662 24 - -
25665 1.38629 1.38629 1.38629 1.38629
25666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25667 25 2.57915 2.25909 2.64442 0.28946 25 - -
25668 1.38629 1.38629 1.38629 1.38629
25669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25670 26 0.23862 2.84929 2.43386 2.70756 26 - -
25671 1.38629 1.38629 1.38629 1.38629
25672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25673 27 2.81865 0.23582 2.88868 2.35662 27 - -
25674 1.38629 1.38629 1.38629 1.38629
25675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25676 28 2.81865 0.23582 2.88868 2.35662 28 - -
25677 1.38629 1.38629 1.38629 1.38629
25678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25679 29 2.81865 0.23582 2.88868 2.35662 29 - -
25680 1.38629 1.38629 1.38629 1.38629
25681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25682 30 2.53331 3.02441 0.20344 2.88069 30 - -
25683 1.38629 1.38629 1.38629 1.38629
25684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25685 31 2.81865 0.23582 2.88868 2.35662 31 - -
25686 1.38629 1.38629 1.38629 1.38629
25687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25688 32 2.57915 2.25909 2.64442 0.28946 32 - -
25689 1.38629 1.38629 1.38629 1.38629
25690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25691 33 2.53331 3.02441 0.20344 2.88069 33 - -
25692 1.38629 1.38629 1.38629 1.38629
25693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25694 34 0.23862 2.84929 2.43386 2.70756 34 - -
25695 1.38629 1.38629 1.38629 1.38629
25696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25697 35 2.53331 3.02441 0.20344 2.88069 35 - -
25698 1.38629 1.38629 1.38629 1.38629
25699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25700 36 2.57915 2.25909 2.64442 0.28946 36 - -
25701 1.38629 1.38629 1.38629 1.38629
25702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25703 37 2.57915 2.25909 2.64442 0.28946 37 - -
25704 1.38629 1.38629 1.38629 1.38629
25705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25706 38 2.57915 2.25909 2.64442 0.28946 38 - -
25707 1.38629 1.38629 1.38629 1.38629
25708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25709 39 0.23862 2.84929 2.43386 2.70756 39 - -
25710 1.38629 1.38629 1.38629 1.38629
25711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25712 40 0.23862 2.84929 2.43386 2.70756 40 - -
25713 1.38629 1.38629 1.38629 1.38629
25714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25715 41 2.53331 3.02441 0.20344 2.88069 41 - -
25716 1.38629 1.38629 1.38629 1.38629
25717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25718 42 2.81865 0.23582 2.88868 2.35662 42 - -
25719 1.38629 1.38629 1.38629 1.38629
25720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25721 43 0.23862 2.84929 2.43386 2.70756 43 - -
25722 1.38629 1.38629 1.38629 1.38629
25723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25724 44 2.57915 2.25909 2.64442 0.28946 44 - -
25725 1.38629 1.38629 1.38629 1.38629
25726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
25727 45 0.23862 2.84929 2.43386 2.70756 45 - -
25728 1.38629 1.38629 1.38629 1.38629
25729 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
25730 //
25731 HMMER3/b [3.0 | March 2010]
25732 NAME 4_LSU_Tracheophyta_4_LSU_start_elevene_long
25733 LENG 45
25734 ALPH DNA
25735 RF no
25736 CS no
25737 MAP yes
25738 DATE Sun Feb 19 00:15:00 2012
25739 NSEQ 95
25740 EFFN 3.325348
25741 CKSUM 977022747
25742 STATS LOCAL MSV -8.2525 0.71931
25743 STATS LOCAL VITERBI -7.5496 0.71931
25744 STATS LOCAL FORWARD -4.0188 0.71931
25745 HMM A C G T
25746 m->m m->i m->d i->m i->i d->m d->d
25747 COMPO 1.39073 1.34440 1.20697 1.65387
25748 1.38629 1.38629 1.38629 1.38629
25749 0.03687 4.01193 4.01193 1.46634 0.26236 0.00000 *
25750 1 0.14178 3.38112 2.80248 3.28286 1 - -
25751 1.38629 1.38629 1.38629 1.38629
25752 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25753 2 2.81301 0.33032 2.87951 1.80109 2 - -
25754 1.38629 1.38629 1.38629 1.38629
25755 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25756 3 2.94812 3.58862 0.11706 3.49338 3 - -
25757 1.38629 1.38629 1.38629 1.38629
25758 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25759 4 0.14178 3.38112 2.80248 3.28286 4 - -
25760 1.38629 1.38629 1.38629 1.38629
25761 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25762 5 2.94812 3.58862 0.11706 3.49338 5 - -
25763 1.38629 1.38629 1.38629 1.38629
25764 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25765 6 0.14178 3.38112 2.80248 3.28286 6 - -
25766 1.38629 1.38629 1.38629 1.38629
25767 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25768 7 3.43409 0.13009 3.48351 2.82971 7 - -
25769 1.38629 1.38629 1.38629 1.38629
25770 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25771 8 3.43409 0.13009 3.48351 2.82971 8 - -
25772 1.38629 1.38629 1.38629 1.38629
25773 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25774 9 3.08947 2.59569 3.13759 0.17854 9 - -
25775 1.38629 1.38629 1.38629 1.38629
25776 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25777 10 3.43409 0.13009 3.48351 2.82971 10 - -
25778 1.38629 1.38629 1.38629 1.38629
25779 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25780 11 0.14178 3.38112 2.80248 3.28286 11 - -
25781 1.38629 1.38629 1.38629 1.38629
25782 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25783 12 2.94812 3.58862 0.11706 3.49338 12 - -
25784 1.38629 1.38629 1.38629 1.38629
25785 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25786 13 2.94812 3.58862 0.11706 3.49338 13 - -
25787 1.38629 1.38629 1.38629 1.38629
25788 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25789 14 3.08947 2.59569 3.13759 0.17854 14 - -
25790 1.38629 1.38629 1.38629 1.38629
25791 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25792 15 3.43409 0.13009 3.48351 2.82971 15 - -
25793 1.38629 1.38629 1.38629 1.38629
25794 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25795 16 0.14178 3.38112 2.80248 3.28286 16 - -
25796 1.38629 1.38629 1.38629 1.38629
25797 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25798 17 2.75201 3.20744 0.18382 2.75424 17 - -
25799 1.38629 1.38629 1.38629 1.38629
25800 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25801 18 2.94812 3.58862 0.11706 3.49338 18 - -
25802 1.38629 1.38629 1.38629 1.38629
25803 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25804 19 3.43409 0.13009 3.48351 2.82971 19 - -
25805 1.38629 1.38629 1.38629 1.38629
25806 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25807 20 2.94812 3.58862 0.11706 3.49338 20 - -
25808 1.38629 1.38629 1.38629 1.38629
25809 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25810 21 2.94812 3.58862 0.11706 3.49338 21 - -
25811 1.38629 1.38629 1.38629 1.38629
25812 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25813 22 2.94812 3.58862 0.11706 3.49338 22 - -
25814 1.38629 1.38629 1.38629 1.38629
25815 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25816 23 2.94812 3.58862 0.11706 3.49338 23 - -
25817 1.38629 1.38629 1.38629 1.38629
25818 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25819 24 3.43409 0.13009 3.48351 2.82971 24 - -
25820 1.38629 1.38629 1.38629 1.38629
25821 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25822 25 3.08947 2.59569 3.13759 0.17854 25 - -
25823 1.38629 1.38629 1.38629 1.38629
25824 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25825 26 0.14178 3.38112 2.80248 3.28286 26 - -
25826 1.38629 1.38629 1.38629 1.38629
25827 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25828 27 3.43409 0.13009 3.48351 2.82971 27 - -
25829 1.38629 1.38629 1.38629 1.38629
25830 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25831 28 3.43409 0.13009 3.48351 2.82971 28 - -
25832 1.38629 1.38629 1.38629 1.38629
25833 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25834 29 3.43409 0.13009 3.48351 2.82971 29 - -
25835 1.38629 1.38629 1.38629 1.38629
25836 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25837 30 2.94812 3.58862 0.11706 3.49338 30 - -
25838 1.38629 1.38629 1.38629 1.38629
25839 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25840 31 3.43409 0.13009 3.48351 2.82971 31 - -
25841 1.38629 1.38629 1.38629 1.38629
25842 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25843 32 3.08947 2.59569 3.13759 0.17854 32 - -
25844 1.38629 1.38629 1.38629 1.38629
25845 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25846 33 2.94812 3.58862 0.11706 3.49338 33 - -
25847 1.38629 1.38629 1.38629 1.38629
25848 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25849 34 0.14178 3.38112 2.80248 3.28286 34 - -
25850 1.38629 1.38629 1.38629 1.38629
25851 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25852 35 2.00758 3.04727 0.26875 2.92129 35 - -
25853 1.38629 1.38629 1.38629 1.38629
25854 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25855 36 3.08947 2.59569 3.13759 0.17854 36 - -
25856 1.38629 1.38629 1.38629 1.38629
25857 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25858 37 3.08947 2.59569 3.13759 0.17854 37 - -
25859 1.38629 1.38629 1.38629 1.38629
25860 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25861 38 3.08947 2.59569 3.13759 0.17854 38 - -
25862 1.38629 1.38629 1.38629 1.38629
25863 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25864 39 0.14178 3.38112 2.80248 3.28286 39 - -
25865 1.38629 1.38629 1.38629 1.38629
25866 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25867 40 0.14178 3.38112 2.80248 3.28286 40 - -
25868 1.38629 1.38629 1.38629 1.38629
25869 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25870 41 2.58108 3.40516 0.15757 3.29989 41 - -
25871 1.38629 1.38629 1.38629 1.38629
25872 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25873 42 3.43409 0.13009 3.48351 2.82971 42 - -
25874 1.38629 1.38629 1.38629 1.38629
25875 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25876 43 0.14178 3.38112 2.80248 3.28286 43 - -
25877 1.38629 1.38629 1.38629 1.38629
25878 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25879 44 3.08947 2.59569 3.13759 0.17854 44 - -
25880 1.38629 1.38629 1.38629 1.38629
25881 0.03687 4.01193 4.01193 1.46634 0.26236 1.09861 0.40547
25882 45 0.14178 3.38112 2.80248 3.28286 45 - -
25883 1.38629 1.38629 1.38629 1.38629
25884 0.01860 3.99367 * 1.46634 0.26236 0.00000 *
25885 //
25886 HMMER3/b [3.0 | March 2010]
25887 NAME 4_LSU_Tracheophyta_4_LSU_start_elevenf_long
25888 LENG 45
25889 ALPH DNA
25890 RF no
25891 CS no
25892 MAP yes
25893 DATE Sun Feb 19 00:15:07 2012
25894 NSEQ 4
25895 EFFN 3.152344
25896 CKSUM 36996361
25897 STATS LOCAL MSV -8.2659 0.71931
25898 STATS LOCAL VITERBI -7.8471 0.71931
25899 STATS LOCAL FORWARD -3.9177 0.71931
25900 HMM A C G T
25901 m->m m->i m->d i->m i->i d->m d->d
25902 COMPO 1.40470 1.27199 1.25449 1.66568
25903 1.38629 1.38629 1.38629 1.38629
25904 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 *
25905 1 0.14954 3.32415 2.76532 3.22056 1 - -
25906 1.38629 1.38629 1.38629 1.38629
25907 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25908 2 3.36834 0.13821 3.42049 2.78160 2 - -
25909 1.38629 1.38629 1.38629 1.38629
25910 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25911 3 2.90797 3.53050 0.12362 3.42932 3 - -
25912 1.38629 1.38629 1.38629 1.38629
25913 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25914 4 3.36834 0.13821 3.42049 2.78160 4 - -
25915 1.38629 1.38629 1.38629 1.38629
25916 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25917 5 2.90797 3.53050 0.12362 3.42932 5 - -
25918 1.38629 1.38629 1.38629 1.38629
25919 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25920 6 0.14954 3.32415 2.76532 3.22056 6 - -
25921 1.38629 1.38629 1.38629 1.38629
25922 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25923 7 3.36834 0.13821 3.42049 2.78160 7 - -
25924 1.38629 1.38629 1.38629 1.38629
25925 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25926 8 3.36834 0.13821 3.42049 2.78160 8 - -
25927 1.38629 1.38629 1.38629 1.38629
25928 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25929 9 3.36834 0.13821 3.42049 2.78160 9 - -
25930 1.38629 1.38629 1.38629 1.38629
25931 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25932 10 3.36834 0.13821 3.42049 2.78160 10 - -
25933 1.38629 1.38629 1.38629 1.38629
25934 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25935 11 0.14954 3.32415 2.76532 3.22056 11 - -
25936 1.38629 1.38629 1.38629 1.38629
25937 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25938 12 2.90797 3.53050 0.12362 3.42932 12 - -
25939 1.38629 1.38629 1.38629 1.38629
25940 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25941 13 2.90797 3.53050 0.12362 3.42932 13 - -
25942 1.38629 1.38629 1.38629 1.38629
25943 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25944 14 3.03232 2.55926 3.08260 0.18802 14 - -
25945 1.38629 1.38629 1.38629 1.38629
25946 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25947 15 3.36834 0.13821 3.42049 2.78160 15 - -
25948 1.38629 1.38629 1.38629 1.38629
25949 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25950 16 0.14954 3.32415 2.76532 3.22056 16 - -
25951 1.38629 1.38629 1.38629 1.38629
25952 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25953 17 2.90797 3.53050 0.12362 3.42932 17 - -
25954 1.38629 1.38629 1.38629 1.38629
25955 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25956 18 2.90797 3.53050 0.12362 3.42932 18 - -
25957 1.38629 1.38629 1.38629 1.38629
25958 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25959 19 3.36834 0.13821 3.42049 2.78160 19 - -
25960 1.38629 1.38629 1.38629 1.38629
25961 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25962 20 2.90797 3.53050 0.12362 3.42932 20 - -
25963 1.38629 1.38629 1.38629 1.38629
25964 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25965 21 2.90797 3.53050 0.12362 3.42932 21 - -
25966 1.38629 1.38629 1.38629 1.38629
25967 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25968 22 2.90797 3.53050 0.12362 3.42932 22 - -
25969 1.38629 1.38629 1.38629 1.38629
25970 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25971 23 2.90797 3.53050 0.12362 3.42932 23 - -
25972 1.38629 1.38629 1.38629 1.38629
25973 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25974 24 3.03232 2.55926 3.08260 0.18802 24 - -
25975 1.38629 1.38629 1.38629 1.38629
25976 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25977 25 3.03232 2.55926 3.08260 0.18802 25 - -
25978 1.38629 1.38629 1.38629 1.38629
25979 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25980 26 0.14954 3.32415 2.76532 3.22056 26 - -
25981 1.38629 1.38629 1.38629 1.38629
25982 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25983 27 3.36834 0.13821 3.42049 2.78160 27 - -
25984 1.38629 1.38629 1.38629 1.38629
25985 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25986 28 3.36834 0.13821 3.42049 2.78160 28 - -
25987 1.38629 1.38629 1.38629 1.38629
25988 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25989 29 3.36834 0.13821 3.42049 2.78160 29 - -
25990 1.38629 1.38629 1.38629 1.38629
25991 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25992 30 2.90797 3.53050 0.12362 3.42932 30 - -
25993 1.38629 1.38629 1.38629 1.38629
25994 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25995 31 3.36834 0.13821 3.42049 2.78160 31 - -
25996 1.38629 1.38629 1.38629 1.38629
25997 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
25998 32 3.03232 2.55926 3.08260 0.18802 32 - -
25999 1.38629 1.38629 1.38629 1.38629
26000 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26001 33 2.90797 3.53050 0.12362 3.42932 33 - -
26002 1.38629 1.38629 1.38629 1.38629
26003 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26004 34 0.14954 3.32415 2.76532 3.22056 34 - -
26005 1.38629 1.38629 1.38629 1.38629
26006 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26007 35 0.14954 3.32415 2.76532 3.22056 35 - -
26008 1.38629 1.38629 1.38629 1.38629
26009 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26010 36 3.03232 2.55926 3.08260 0.18802 36 - -
26011 1.38629 1.38629 1.38629 1.38629
26012 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26013 37 3.03232 2.55926 3.08260 0.18802 37 - -
26014 1.38629 1.38629 1.38629 1.38629
26015 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26016 38 3.03232 2.55926 3.08260 0.18802 38 - -
26017 1.38629 1.38629 1.38629 1.38629
26018 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26019 39 0.14954 3.32415 2.76532 3.22056 39 - -
26020 1.38629 1.38629 1.38629 1.38629
26021 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26022 40 0.14954 3.32415 2.76532 3.22056 40 - -
26023 1.38629 1.38629 1.38629 1.38629
26024 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26025 41 2.90797 3.53050 0.12362 3.42932 41 - -
26026 1.38629 1.38629 1.38629 1.38629
26027 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26028 42 3.36834 0.13821 3.42049 2.78160 42 - -
26029 1.38629 1.38629 1.38629 1.38629
26030 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26031 43 0.14954 3.32415 2.76532 3.22056 43 - -
26032 1.38629 1.38629 1.38629 1.38629
26033 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26034 44 3.03232 2.55926 3.08260 0.18802 44 - -
26035 1.38629 1.38629 1.38629 1.38629
26036 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
26037 45 0.14954 3.32415 2.76532 3.22056 45 - -
26038 1.38629 1.38629 1.38629 1.38629
26039 0.01922 3.96126 * 1.46634 0.26236 0.00000 *
26040 //
26041 HMMER3/b [3.0 | March 2010]
26042 NAME 4_LSU_Tracheophyta_4_LSU_start_eleveng_long
26043 LENG 45
26044 ALPH DNA
26045 RF no
26046 CS no
26047 MAP yes
26048 DATE Sun Feb 19 00:15:15 2012
26049 NSEQ 344
26050 EFFN 4.233337
26051 CKSUM 1202060389
26052 STATS LOCAL MSV -6.8339 0.71933
26053 STATS LOCAL VITERBI -7.6903 0.71933
26054 STATS LOCAL FORWARD -3.9091 0.71933
26055 HMM A C G T
26056 m->m m->i m->d i->m i->i d->m d->d
26057 COMPO 1.44187 1.24554 1.23728 1.68439
26058 1.38629 1.38629 1.38629 1.38629
26059 0.03158 4.16408 4.16408 1.46634 0.26236 0.00000 *
26060 1 1.20841 1.13138 1.91937 1.46084 1 - -
26061 1.38629 1.38629 1.38629 1.38629
26062 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26063 2 1.97635 0.81204 2.05225 1.24124 2 - -
26064 1.38629 1.38629 1.38629 1.38629
26065 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26066 3 2.75429 3.48717 0.13644 3.40216 3 - -
26067 1.38629 1.38629 1.38629 1.38629
26068 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26069 4 2.96058 0.21395 3.02381 2.38373 4 - -
26070 1.38629 1.38629 1.38629 1.38629
26071 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26072 5 3.07463 3.74265 0.10550 3.49902 5 - -
26073 1.38629 1.38629 1.38629 1.38629
26074 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26075 6 0.12189 3.59463 2.85353 3.51840 6 - -
26076 1.38629 1.38629 1.38629 1.38629
26077 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26078 7 3.61242 0.12118 3.65360 2.79289 7 - -
26079 1.38629 1.38629 1.38629 1.38629
26080 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26081 8 3.72015 0.10061 3.75665 3.03400 8 - -
26082 1.38629 1.38629 1.38629 1.38629
26083 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26084 9 3.35125 0.18106 3.40307 2.32989 9 - -
26085 1.38629 1.38629 1.38629 1.38629
26086 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26087 10 3.50821 0.13083 3.33406 2.86402 10 - -
26088 1.38629 1.38629 1.38629 1.38629
26089 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26090 11 0.13598 3.48607 2.90585 3.17447 11 - -
26091 1.38629 1.38629 1.38629 1.38629
26092 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26093 12 3.11636 3.83684 0.09317 3.76856 12 - -
26094 1.38629 1.38629 1.38629 1.38629
26095 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26096 13 3.11636 3.83684 0.09317 3.76856 13 - -
26097 1.38629 1.38629 1.38629 1.38629
26098 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26099 14 3.29803 2.61097 3.33834 0.15772 14 - -
26100 1.38629 1.38629 1.38629 1.38629
26101 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26102 15 3.72015 0.10061 3.75665 3.03400 15 - -
26103 1.38629 1.38629 1.38629 1.38629
26104 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26105 16 0.11265 3.63223 2.96414 3.55860 16 - -
26106 1.38629 1.38629 1.38629 1.38629
26107 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26108 17 3.07489 3.74322 0.10542 3.50050 17 - -
26109 1.38629 1.38629 1.38629 1.38629
26110 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26111 18 2.80390 3.71556 0.11793 3.63713 18 - -
26112 1.38629 1.38629 1.38629 1.38629
26113 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26114 19 3.54721 0.13460 3.59123 2.66547 19 - -
26115 1.38629 1.38629 1.38629 1.38629
26116 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26117 20 3.11636 3.83684 0.09317 3.76856 20 - -
26118 1.38629 1.38629 1.38629 1.38629
26119 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26120 21 2.89306 3.09339 0.14401 3.40010 21 - -
26121 1.38629 1.38629 1.38629 1.38629
26122 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26123 22 3.11636 3.83684 0.09317 3.76856 22 - -
26124 1.38629 1.38629 1.38629 1.38629
26125 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26126 23 0.27775 3.11797 1.90629 3.00308 23 - -
26127 1.38629 1.38629 1.38629 1.38629
26128 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26129 24 2.43721 0.67127 2.57917 1.12177 24 - -
26130 1.38629 1.38629 1.38629 1.38629
26131 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26132 25 2.83665 1.95088 2.97818 0.28989 25 - -
26133 1.38629 1.38629 1.38629 1.38629
26134 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26135 26 0.11265 3.63223 2.96414 3.55860 26 - -
26136 1.38629 1.38629 1.38629 1.38629
26137 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26138 27 3.72015 0.10061 3.75665 3.03400 27 - -
26139 1.38629 1.38629 1.38629 1.38629
26140 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26141 28 3.72015 0.10061 3.75665 3.03400 28 - -
26142 1.38629 1.38629 1.38629 1.38629
26143 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26144 29 3.72015 0.10061 3.75665 3.03400 29 - -
26145 1.38629 1.38629 1.38629 1.38629
26146 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26147 30 3.11636 3.83684 0.09317 3.76856 30 - -
26148 1.38629 1.38629 1.38629 1.38629
26149 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26150 31 3.72015 0.10061 3.75665 3.03400 31 - -
26151 1.38629 1.38629 1.38629 1.38629
26152 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26153 32 3.24554 2.47422 3.28838 0.17494 32 - -
26154 1.38629 1.38629 1.38629 1.38629
26155 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26156 33 3.11636 3.83684 0.09317 3.76856 33 - -
26157 1.38629 1.38629 1.38629 1.38629
26158 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26159 34 0.11265 3.63223 2.96414 3.55860 34 - -
26160 1.38629 1.38629 1.38629 1.38629
26161 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26162 35 2.13801 3.33567 0.21466 3.22624 35 - -
26163 1.38629 1.38629 1.38629 1.38629
26164 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26165 36 3.35066 2.76152 3.38856 0.14158 36 - -
26166 1.38629 1.38629 1.38629 1.38629
26167 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26168 37 3.35066 2.76152 3.38856 0.14158 37 - -
26169 1.38629 1.38629 1.38629 1.38629
26170 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26171 38 3.35066 2.76152 3.38856 0.14158 38 - -
26172 1.38629 1.38629 1.38629 1.38629
26173 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26174 39 0.11265 3.63223 2.96414 3.55860 39 - -
26175 1.38629 1.38629 1.38629 1.38629
26176 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26177 40 0.11265 3.63223 2.96414 3.55860 40 - -
26178 1.38629 1.38629 1.38629 1.38629
26179 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26180 41 3.11636 3.83684 0.09317 3.76856 41 - -
26181 1.38629 1.38629 1.38629 1.38629
26182 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26183 42 3.72015 0.10061 3.75665 3.03400 42 - -
26184 1.38629 1.38629 1.38629 1.38629
26185 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26186 43 0.11265 3.63223 2.96414 3.55860 43 - -
26187 1.38629 1.38629 1.38629 1.38629
26188 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26189 44 3.35066 2.76152 3.38856 0.14158 44 - -
26190 1.38629 1.38629 1.38629 1.38629
26191 0.03158 4.16408 4.16408 1.46634 0.26236 1.09861 0.40547
26192 45 0.12194 3.59444 2.85299 3.51819 45 - -
26193 1.38629 1.38629 1.38629 1.38629
26194 0.01592 4.14841 * 1.46634 0.26236 0.00000 *
26195 //
26196 HMMER3/b [3.0 | March 2010]
26197 NAME 4_LSU_Tracheophyta_4_LSU_start_fifteen_long
26198 LENG 45
26199 ALPH DNA
26200 RF no
26201 CS no
26202 MAP yes
26203 DATE Sun Feb 19 00:16:00 2012
26204 NSEQ 92
26205 EFFN 3.287720
26206 CKSUM 1199922528
26207 STATS LOCAL MSV -8.2231 0.71932
26208 STATS LOCAL VITERBI -7.6942 0.71932
26209 STATS LOCAL FORWARD -3.9730 0.71932
26210 HMM A C G T
26211 m->m m->i m->d i->m i->i d->m d->d
26212 COMPO 1.33730 1.39990 1.25149 1.58599
26213 1.38629 1.38629 1.38629 1.38629
26214 0.03713 4.00510 4.00510 1.46634 0.26236 0.00000 *
26215 1 0.14339 3.36900 2.79461 3.26960 1 - -
26216 1.38629 1.38629 1.38629 1.38629
26217 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26218 2 2.99535 2.39116 3.04673 0.20956 2 - -
26219 1.38629 1.38629 1.38629 1.38629
26220 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26221 3 2.93966 3.57632 0.11842 3.47981 3 - -
26222 1.38629 1.38629 1.38629 1.38629
26223 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26224 4 0.14339 3.36900 2.79461 3.26960 4 - -
26225 1.38629 1.38629 1.38629 1.38629
26226 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26227 5 2.93966 3.57632 0.11842 3.47981 5 - -
26228 1.38629 1.38629 1.38629 1.38629
26229 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26230 6 0.14339 3.36900 2.79461 3.26960 6 - -
26231 1.38629 1.38629 1.38629 1.38629
26232 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26233 7 3.42013 0.13177 3.47014 2.81954 7 - -
26234 1.38629 1.38629 1.38629 1.38629
26235 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26236 8 3.42013 0.13177 3.47014 2.81954 8 - -
26237 1.38629 1.38629 1.38629 1.38629
26238 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26239 9 3.07726 2.58792 3.12585 0.18052 9 - -
26240 1.38629 1.38629 1.38629 1.38629
26241 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26242 10 3.42013 0.13177 3.47014 2.81954 10 - -
26243 1.38629 1.38629 1.38629 1.38629
26244 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26245 11 0.14339 3.36900 2.79461 3.26960 11 - -
26246 1.38629 1.38629 1.38629 1.38629
26247 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26248 12 2.79119 3.50709 0.13291 3.40756 12 - -
26249 1.38629 1.38629 1.38629 1.38629
26250 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26251 13 2.93966 3.57632 0.11842 3.47981 13 - -
26252 1.38629 1.38629 1.38629 1.38629
26253 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26254 14 3.07726 2.58792 3.12585 0.18052 14 - -
26255 1.38629 1.38629 1.38629 1.38629
26256 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26257 15 3.42013 0.13177 3.47014 2.81954 15 - -
26258 1.38629 1.38629 1.38629 1.38629
26259 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26260 16 0.14339 3.36900 2.79461 3.26960 16 - -
26261 1.38629 1.38629 1.38629 1.38629
26262 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26263 17 2.93966 3.57632 0.11842 3.47981 17 - -
26264 1.38629 1.38629 1.38629 1.38629
26265 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26266 18 2.72590 3.47419 0.14014 3.37283 18 - -
26267 1.38629 1.38629 1.38629 1.38629
26268 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26269 19 3.42013 0.13177 3.47014 2.81954 19 - -
26270 1.38629 1.38629 1.38629 1.38629
26271 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26272 20 2.93966 3.57632 0.11842 3.47981 20 - -
26273 1.38629 1.38629 1.38629 1.38629
26274 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26275 21 2.93966 3.57632 0.11842 3.47981 21 - -
26276 1.38629 1.38629 1.38629 1.38629
26277 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26278 22 2.93966 3.57632 0.11842 3.47981 22 - -
26279 1.38629 1.38629 1.38629 1.38629
26280 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26281 23 2.50408 3.35218 0.16935 3.24339 23 - -
26282 1.38629 1.38629 1.38629 1.38629
26283 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26284 24 3.07462 0.17317 3.25355 2.60153 24 - -
26285 1.38629 1.38629 1.38629 1.38629
26286 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26287 25 3.07726 2.58792 3.12585 0.18052 25 - -
26288 1.38629 1.38629 1.38629 1.38629
26289 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26290 26 0.14339 3.36900 2.79461 3.26960 26 - -
26291 1.38629 1.38629 1.38629 1.38629
26292 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26293 27 3.42013 0.13177 3.47014 2.81954 27 - -
26294 1.38629 1.38629 1.38629 1.38629
26295 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26296 28 3.42013 0.13177 3.47014 2.81954 28 - -
26297 1.38629 1.38629 1.38629 1.38629
26298 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26299 29 3.42013 0.13177 3.47014 2.81954 29 - -
26300 1.38629 1.38629 1.38629 1.38629
26301 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26302 30 2.93966 3.57632 0.11842 3.47981 30 - -
26303 1.38629 1.38629 1.38629 1.38629
26304 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26305 31 3.42013 0.13177 3.47014 2.81954 31 - -
26306 1.38629 1.38629 1.38629 1.38629
26307 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26308 32 3.07726 2.58792 3.12585 0.18052 32 - -
26309 1.38629 1.38629 1.38629 1.38629
26310 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26311 33 2.93966 3.57632 0.11842 3.47981 33 - -
26312 1.38629 1.38629 1.38629 1.38629
26313 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26314 34 0.14339 3.36900 2.79461 3.26960 34 - -
26315 1.38629 1.38629 1.38629 1.38629
26316 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26317 35 0.24643 3.04265 2.14536 2.92474 35 - -
26318 1.38629 1.38629 1.38629 1.38629
26319 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26320 36 3.07726 2.58792 3.12585 0.18052 36 - -
26321 1.38629 1.38629 1.38629 1.38629
26322 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26323 37 3.07726 2.58792 3.12585 0.18052 37 - -
26324 1.38629 1.38629 1.38629 1.38629
26325 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26326 38 3.07726 2.58792 3.12585 0.18052 38 - -
26327 1.38629 1.38629 1.38629 1.38629
26328 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26329 39 0.14339 3.36900 2.79461 3.26960 39 - -
26330 1.38629 1.38629 1.38629 1.38629
26331 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26332 40 0.14339 3.36900 2.79461 3.26960 40 - -
26333 1.38629 1.38629 1.38629 1.38629
26334 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26335 41 2.93966 3.57632 0.11842 3.47981 41 - -
26336 1.38629 1.38629 1.38629 1.38629
26337 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26338 42 3.42013 0.13177 3.47014 2.81954 42 - -
26339 1.38629 1.38629 1.38629 1.38629
26340 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26341 43 0.14339 3.36900 2.79461 3.26960 43 - -
26342 1.38629 1.38629 1.38629 1.38629
26343 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26344 44 3.07726 2.58792 3.12585 0.18052 44 - -
26345 1.38629 1.38629 1.38629 1.38629
26346 0.03713 4.00510 4.00510 1.46634 0.26236 1.09861 0.40547
26347 45 0.14339 3.36900 2.79461 3.26960 45 - -
26348 1.38629 1.38629 1.38629 1.38629
26349 0.01874 3.98671 * 1.46634 0.26236 0.00000 *
26350 //
26351 HMMER3/b [3.0 | March 2010]
26352 NAME 4_LSU_Tracheophyta_4_LSU_start_five_long
26353 LENG 45
26354 ALPH DNA
26355 RF no
26356 CS no
26357 MAP yes
26358 DATE Sun Feb 19 00:11:27 2012
26359 NSEQ 157
26360 EFFN 4.201935
26361 CKSUM 3581575669
26362 STATS LOCAL MSV -6.8273 0.71932
26363 STATS LOCAL VITERBI -7.7042 0.71932
26364 STATS LOCAL FORWARD -3.8808 0.71932
26365 HMM A C G T
26366 m->m m->i m->d i->m i->i d->m d->d
26367 COMPO 1.46106 1.23380 1.22309 1.70095
26368 1.38629 1.38629 1.38629 1.38629
26369 0.03174 4.15918 4.15918 1.46634 0.26236 0.00000 *
26370 1 1.32983 0.93942 2.06623 1.52344 1 - -
26371 1.38629 1.38629 1.38629 1.38629
26372 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26373 2 1.85908 0.77789 2.05547 1.35954 2 - -
26374 1.38629 1.38629 1.38629 1.38629
26375 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26376 3 3.06034 3.71507 0.10895 3.44195 3 - -
26377 1.38629 1.38629 1.38629 1.38629
26378 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26379 4 2.46516 0.30189 2.72397 2.20751 4 - -
26380 1.38629 1.38629 1.38629 1.38629
26381 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26382 5 3.11149 3.82961 0.09379 3.76052 5 - -
26383 1.38629 1.38629 1.38629 1.38629
26384 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26385 6 0.11342 3.62471 2.95930 3.55034 6 - -
26386 1.38629 1.38629 1.38629 1.38629
26387 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26388 7 3.71171 0.10136 3.74861 3.02806 7 - -
26389 1.38629 1.38629 1.38629 1.38629
26390 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26391 8 3.71171 0.10136 3.74861 3.02806 8 - -
26392 1.38629 1.38629 1.38629 1.38629
26393 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26394 9 3.32228 0.18765 3.37511 2.29447 9 - -
26395 1.38629 1.38629 1.38629 1.38629
26396 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26397 10 3.71171 0.10136 3.74861 3.02806 10 - -
26398 1.38629 1.38629 1.38629 1.38629
26399 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26400 11 0.11342 3.62471 2.95930 3.55034 11 - -
26401 1.38629 1.38629 1.38629 1.38629
26402 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26403 12 3.11149 3.82961 0.09379 3.76052 12 - -
26404 1.38629 1.38629 1.38629 1.38629
26405 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26406 13 3.11149 3.82961 0.09379 3.76052 13 - -
26407 1.38629 1.38629 1.38629 1.38629
26408 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26409 14 3.25469 2.51402 3.29698 0.17023 14 - -
26410 1.38629 1.38629 1.38629 1.38629
26411 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26412 15 3.71171 0.10136 3.74861 3.02806 15 - -
26413 1.38629 1.38629 1.38629 1.38629
26414 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26415 16 0.11342 3.62471 2.95930 3.55034 16 - -
26416 1.38629 1.38629 1.38629 1.38629
26417 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26418 17 2.75306 3.68610 0.12329 3.60497 17 - -
26419 1.38629 1.38629 1.38629 1.38629
26420 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26421 18 2.89640 3.54949 0.13581 3.14576 18 - -
26422 1.38629 1.38629 1.38629 1.38629
26423 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26424 19 3.54044 0.13509 3.58471 2.66477 19 - -
26425 1.38629 1.38629 1.38629 1.38629
26426 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26427 20 3.11149 3.82961 0.09379 3.76052 20 - -
26428 1.38629 1.38629 1.38629 1.38629
26429 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26430 21 2.97710 3.12600 0.13567 3.44093 21 - -
26431 1.38629 1.38629 1.38629 1.38629
26432 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26433 22 3.11149 3.82961 0.09379 3.76052 22 - -
26434 1.38629 1.38629 1.38629 1.38629
26435 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26436 23 0.60645 2.70802 1.16635 2.56984 23 - -
26437 1.38629 1.38629 1.38629 1.38629
26438 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26439 24 2.55747 0.37986 2.78908 1.73123 24 - -
26440 1.38629 1.38629 1.38629 1.38629
26441 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26442 25 3.11326 2.18476 3.16216 0.22226 25 - -
26443 1.38629 1.38629 1.38629 1.38629
26444 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26445 26 0.11342 3.62471 2.95930 3.55034 26 - -
26446 1.38629 1.38629 1.38629 1.38629
26447 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26448 27 3.71171 0.10136 3.74861 3.02806 27 - -
26449 1.38629 1.38629 1.38629 1.38629
26450 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26451 28 3.71171 0.10136 3.74861 3.02806 28 - -
26452 1.38629 1.38629 1.38629 1.38629
26453 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26454 29 3.71171 0.10136 3.74861 3.02806 29 - -
26455 1.38629 1.38629 1.38629 1.38629
26456 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26457 30 3.11149 3.82961 0.09379 3.76052 30 - -
26458 1.38629 1.38629 1.38629 1.38629
26459 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26460 31 3.44260 0.13868 3.16422 2.89555 31 - -
26461 1.38629 1.38629 1.38629 1.38629
26462 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26463 32 3.11580 2.67240 2.84404 0.18828 32 - -
26464 1.38629 1.38629 1.38629 1.38629
26465 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26466 33 3.11149 3.82961 0.09379 3.76052 33 - -
26467 1.38629 1.38629 1.38629 1.38629
26468 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26469 34 0.11342 3.62471 2.95930 3.55034 34 - -
26470 1.38629 1.38629 1.38629 1.38629
26471 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26472 35 2.41235 3.50416 0.16583 3.40734 35 - -
26473 1.38629 1.38629 1.38629 1.38629
26474 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26475 36 3.34261 2.75638 3.38083 0.14258 36 - -
26476 1.38629 1.38629 1.38629 1.38629
26477 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26478 37 3.34261 2.75638 3.38083 0.14258 37 - -
26479 1.38629 1.38629 1.38629 1.38629
26480 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26481 38 3.34261 2.75638 3.38083 0.14258 38 - -
26482 1.38629 1.38629 1.38629 1.38629
26483 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26484 39 0.11342 3.62471 2.95930 3.55034 39 - -
26485 1.38629 1.38629 1.38629 1.38629
26486 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26487 40 0.11342 3.62471 2.95930 3.55034 40 - -
26488 1.38629 1.38629 1.38629 1.38629
26489 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26490 41 3.11149 3.82961 0.09379 3.76052 41 - -
26491 1.38629 1.38629 1.38629 1.38629
26492 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26493 42 3.71171 0.10136 3.74861 3.02806 42 - -
26494 1.38629 1.38629 1.38629 1.38629
26495 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26496 43 0.11342 3.62471 2.95930 3.55034 43 - -
26497 1.38629 1.38629 1.38629 1.38629
26498 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26499 44 3.34261 2.75638 3.38083 0.14258 44 - -
26500 1.38629 1.38629 1.38629 1.38629
26501 0.03174 4.15918 4.15918 1.46634 0.26236 1.09861 0.40547
26502 45 0.11342 3.62471 2.95930 3.55034 45 - -
26503 1.38629 1.38629 1.38629 1.38629
26504 0.01600 4.14344 * 1.46634 0.26236 0.00000 *
26505 //
26506 HMMER3/b [3.0 | March 2010]
26507 NAME 4_LSU_Tracheophyta_4_LSU_start_four_long
26508 LENG 45
26509 ALPH DNA
26510 RF no
26511 CS no
26512 MAP yes
26513 DATE Sun Feb 19 00:11:19 2012
26514 NSEQ 19
26515 EFFN 3.363037
26516 CKSUM 3416317619
26517 STATS LOCAL MSV -8.2126 0.71933
26518 STATS LOCAL VITERBI -7.7490 0.71933
26519 STATS LOCAL FORWARD -3.7875 0.71933
26520 HMM A C G T
26521 m->m m->i m->d i->m i->i d->m d->d
26522 COMPO 1.39475 1.27161 1.18437 1.79704
26523 1.38629 1.38629 1.38629 1.38629
26524 0.03661 4.01873 4.01873 1.46634 0.26236 0.00000 *
26525 1 0.14021 3.39310 2.81025 3.29598 1 - -
26526 1.38629 1.38629 1.38629 1.38629
26527 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26528 2 3.10158 2.60339 3.14924 0.17660 2 - -
26529 1.38629 1.38629 1.38629 1.38629
26530 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26531 3 2.95646 3.60076 0.11575 3.50679 3 - -
26532 1.38629 1.38629 1.38629 1.38629
26533 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26534 4 3.44789 0.12846 3.49672 2.83975 4 - -
26535 1.38629 1.38629 1.38629 1.38629
26536 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26537 5 2.95646 3.60076 0.11575 3.50679 5 - -
26538 1.38629 1.38629 1.38629 1.38629
26539 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26540 6 0.14021 3.39310 2.81025 3.29598 6 - -
26541 1.38629 1.38629 1.38629 1.38629
26542 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26543 7 3.44789 0.12846 3.49672 2.83975 7 - -
26544 1.38629 1.38629 1.38629 1.38629
26545 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26546 8 3.44789 0.12846 3.49672 2.83975 8 - -
26547 1.38629 1.38629 1.38629 1.38629
26548 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26549 9 3.44789 0.12846 3.49672 2.83975 9 - -
26550 1.38629 1.38629 1.38629 1.38629
26551 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26552 10 3.44789 0.12846 3.49672 2.83975 10 - -
26553 1.38629 1.38629 1.38629 1.38629
26554 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26555 11 0.14021 3.39310 2.81025 3.29598 11 - -
26556 1.38629 1.38629 1.38629 1.38629
26557 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26558 12 2.95646 3.60076 0.11575 3.50679 12 - -
26559 1.38629 1.38629 1.38629 1.38629
26560 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26561 13 2.95646 3.60076 0.11575 3.50679 13 - -
26562 1.38629 1.38629 1.38629 1.38629
26563 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26564 14 0.14021 3.39310 2.81025 3.29598 14 - -
26565 1.38629 1.38629 1.38629 1.38629
26566 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26567 15 2.83330 2.01058 2.89091 0.28536 15 - -
26568 1.38629 1.38629 1.38629 1.38629
26569 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26570 16 2.95646 3.60076 0.11575 3.50679 16 - -
26571 1.38629 1.38629 1.38629 1.38629
26572 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26573 17 2.95646 3.60076 0.11575 3.50679 17 - -
26574 1.38629 1.38629 1.38629 1.38629
26575 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26576 18 2.95646 3.60076 0.11575 3.50679 18 - -
26577 1.38629 1.38629 1.38629 1.38629
26578 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26579 19 3.44789 0.12846 3.49672 2.83975 19 - -
26580 1.38629 1.38629 1.38629 1.38629
26581 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26582 20 2.95646 3.60076 0.11575 3.50679 20 - -
26583 1.38629 1.38629 1.38629 1.38629
26584 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26585 21 0.14021 3.39310 2.81025 3.29598 21 - -
26586 1.38629 1.38629 1.38629 1.38629
26587 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26588 22 2.95646 3.60076 0.11575 3.50679 22 - -
26589 1.38629 1.38629 1.38629 1.38629
26590 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26591 23 2.95646 3.60076 0.11575 3.50679 23 - -
26592 1.38629 1.38629 1.38629 1.38629
26593 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26594 24 2.36268 0.48681 2.04280 1.82275 24 - -
26595 1.38629 1.38629 1.38629 1.38629
26596 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26597 25 3.44789 0.12846 3.49672 2.83975 25 - -
26598 1.38629 1.38629 1.38629 1.38629
26599 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26600 26 0.14021 3.39310 2.81025 3.29598 26 - -
26601 1.38629 1.38629 1.38629 1.38629
26602 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26603 27 3.44789 0.12846 3.49672 2.83975 27 - -
26604 1.38629 1.38629 1.38629 1.38629
26605 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26606 28 3.44789 0.12846 3.49672 2.83975 28 - -
26607 1.38629 1.38629 1.38629 1.38629
26608 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26609 29 3.44789 0.12846 3.49672 2.83975 29 - -
26610 1.38629 1.38629 1.38629 1.38629
26611 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26612 30 2.95646 3.60076 0.11575 3.50679 30 - -
26613 1.38629 1.38629 1.38629 1.38629
26614 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26615 31 3.44789 0.12846 3.49672 2.83975 31 - -
26616 1.38629 1.38629 1.38629 1.38629
26617 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26618 32 2.44542 1.16167 2.51596 0.65477 32 - -
26619 1.38629 1.38629 1.38629 1.38629
26620 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26621 33 2.95646 3.60076 0.11575 3.50679 33 - -
26622 1.38629 1.38629 1.38629 1.38629
26623 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26624 34 0.14021 3.39310 2.81025 3.29598 34 - -
26625 1.38629 1.38629 1.38629 1.38629
26626 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26627 35 2.95646 3.60076 0.11575 3.50679 35 - -
26628 1.38629 1.38629 1.38629 1.38629
26629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26630 36 3.10158 2.60339 3.14924 0.17660 36 - -
26631 1.38629 1.38629 1.38629 1.38629
26632 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26633 37 3.10158 2.60339 3.14924 0.17660 37 - -
26634 1.38629 1.38629 1.38629 1.38629
26635 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26636 38 3.10158 2.60339 3.14924 0.17660 38 - -
26637 1.38629 1.38629 1.38629 1.38629
26638 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26639 39 0.14021 3.39310 2.81025 3.29598 39 - -
26640 1.38629 1.38629 1.38629 1.38629
26641 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26642 40 0.14021 3.39310 2.81025 3.29598 40 - -
26643 1.38629 1.38629 1.38629 1.38629
26644 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26645 41 2.95646 3.60076 0.11575 3.50679 41 - -
26646 1.38629 1.38629 1.38629 1.38629
26647 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26648 42 3.44789 0.12846 3.49672 2.83975 42 - -
26649 1.38629 1.38629 1.38629 1.38629
26650 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26651 43 0.14021 3.39310 2.81025 3.29598 43 - -
26652 1.38629 1.38629 1.38629 1.38629
26653 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26654 44 3.10158 2.60339 3.14924 0.17660 44 - -
26655 1.38629 1.38629 1.38629 1.38629
26656 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547
26657 45 0.14021 3.39310 2.81025 3.29598 45 - -
26658 1.38629 1.38629 1.38629 1.38629
26659 0.01847 4.00059 * 1.46634 0.26236 0.00000 *
26660 //
26661 HMMER3/b [3.0 | March 2010]
26662 NAME 4_LSU_Tracheophyta_4_LSU_start_fourteen_long
26663 LENG 45
26664 ALPH DNA
26665 RF no
26666 CS no
26667 MAP yes
26668 DATE Sun Feb 19 00:15:51 2012
26669 NSEQ 140
26670 EFFN 4.627075
26671 CKSUM 3011099649
26672 STATS LOCAL MSV -6.6527 0.71932
26673 STATS LOCAL VITERBI -7.6496 0.71932
26674 STATS LOCAL FORWARD -3.9115 0.71932
26675 HMM A C G T
26676 m->m m->i m->d i->m i->i d->m d->d
26677 COMPO 1.43118 1.23274 1.27380 1.66224
26678 1.38629 1.38629 1.38629 1.38629
26679 0.02973 4.22348 4.22348 1.46634 0.26236 0.00000 *
26680 1 1.37717 1.60803 2.10525 0.85423 1 - -
26681 1.38629 1.38629 1.38629 1.38629
26682 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26683 2 2.72518 0.45872 2.70806 1.44517 2 - -
26684 1.38629 1.38629 1.38629 1.38629
26685 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26686 3 2.39521 1.56755 0.49190 2.42108 3 - -
26687 1.38629 1.38629 1.38629 1.38629
26688 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26689 4 3.18104 0.14395 3.52007 2.76579 4 - -
26690 1.38629 1.38629 1.38629 1.38629
26691 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26692 5 3.17322 3.92093 0.08634 3.86202 5 - -
26693 1.38629 1.38629 1.38629 1.38629
26694 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26695 6 0.10403 3.72055 3.02131 3.65575 6 - -
26696 1.38629 1.38629 1.38629 1.38629
26697 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26698 7 3.73295 0.10823 3.76892 2.88994 7 - -
26699 1.38629 1.38629 1.38629 1.38629
26700 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26701 8 3.70997 0.11268 3.74707 2.83880 8 - -
26702 1.38629 1.38629 1.38629 1.38629
26703 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26704 9 3.46625 0.16606 3.51430 2.38592 9 - -
26705 1.38629 1.38629 1.38629 1.38629
26706 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26707 10 3.72711 0.10935 3.76336 2.87672 10 - -
26708 1.38629 1.38629 1.38629 1.38629
26709 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26710 11 0.10403 3.72055 3.02131 3.65575 11 - -
26711 1.38629 1.38629 1.38629 1.38629
26712 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26713 12 1.53211 2.99966 0.38944 2.87027 12 - -
26714 1.38629 1.38629 1.38629 1.38629
26715 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26716 13 3.17322 3.92093 0.08634 3.86202 13 - -
26717 1.38629 1.38629 1.38629 1.38629
26718 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26719 14 3.44646 2.82292 3.48058 0.13020 14 - -
26720 1.38629 1.38629 1.38629 1.38629
26721 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26722 15 3.81848 0.09227 3.85031 3.10311 15 - -
26723 1.38629 1.38629 1.38629 1.38629
26724 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26725 16 0.10403 3.72055 3.02131 3.65575 16 - -
26726 1.38629 1.38629 1.38629 1.38629
26727 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26728 17 3.17322 3.92093 0.08634 3.86202 17 - -
26729 1.38629 1.38629 1.38629 1.38629
26730 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26731 18 2.96577 3.85342 0.10022 3.78836 18 - -
26732 1.38629 1.38629 1.38629 1.38629
26733 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26734 19 2.81556 0.45604 2.88277 1.38486 19 - -
26735 1.38629 1.38629 1.38629 1.38629
26736 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26737 20 3.17322 3.92093 0.08634 3.86202 20 - -
26738 1.38629 1.38629 1.38629 1.38629
26739 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26740 21 3.17322 3.92093 0.08634 3.86202 21 - -
26741 1.38629 1.38629 1.38629 1.38629
26742 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26743 22 3.17322 3.92093 0.08634 3.86202 22 - -
26744 1.38629 1.38629 1.38629 1.38629
26745 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26746 23 0.29522 3.14036 1.80891 3.02547 23 - -
26747 1.38629 1.38629 1.38629 1.38629
26748 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26749 24 2.36283 0.62456 2.36537 1.28577 24 - -
26750 1.38629 1.38629 1.38629 1.38629
26751 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26752 25 3.33089 2.48707 3.37093 0.16638 25 - -
26753 1.38629 1.38629 1.38629 1.38629
26754 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26755 26 0.10403 3.72055 3.02131 3.65575 26 - -
26756 1.38629 1.38629 1.38629 1.38629
26757 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26758 27 3.75492 0.10405 3.78981 2.94093 27 - -
26759 1.38629 1.38629 1.38629 1.38629
26760 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26761 28 3.81848 0.09227 3.85031 3.10311 28 - -
26762 1.38629 1.38629 1.38629 1.38629
26763 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26764 29 3.81848 0.09227 3.85031 3.10311 29 - -
26765 1.38629 1.38629 1.38629 1.38629
26766 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26767 30 3.17322 3.92093 0.08634 3.86202 30 - -
26768 1.38629 1.38629 1.38629 1.38629
26769 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26770 31 3.81848 0.09227 3.85031 3.10311 31 - -
26771 1.38629 1.38629 1.38629 1.38629
26772 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26773 32 3.44646 2.82292 3.48058 0.13020 32 - -
26774 1.38629 1.38629 1.38629 1.38629
26775 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26776 33 3.17322 3.92093 0.08634 3.86202 33 - -
26777 1.38629 1.38629 1.38629 1.38629
26778 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26779 34 0.10403 3.72055 3.02131 3.65575 34 - -
26780 1.38629 1.38629 1.38629 1.38629
26781 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26782 35 2.00667 3.32757 0.23624 3.21665 35 - -
26783 1.38629 1.38629 1.38629 1.38629
26784 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26785 36 2.82308 1.45609 2.88511 0.42835 36 - -
26786 1.38629 1.38629 1.38629 1.38629
26787 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26788 37 3.44646 2.82292 3.48058 0.13020 37 - -
26789 1.38629 1.38629 1.38629 1.38629
26790 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26791 38 3.44646 2.82292 3.48058 0.13020 38 - -
26792 1.38629 1.38629 1.38629 1.38629
26793 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26794 39 0.10403 3.72055 3.02131 3.65575 39 - -
26795 1.38629 1.38629 1.38629 1.38629
26796 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26797 40 0.10403 3.72055 3.02131 3.65575 40 - -
26798 1.38629 1.38629 1.38629 1.38629
26799 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26800 41 3.17322 3.92093 0.08634 3.86202 41 - -
26801 1.38629 1.38629 1.38629 1.38629
26802 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26803 42 3.81848 0.09227 3.85031 3.10311 42 - -
26804 1.38629 1.38629 1.38629 1.38629
26805 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26806 43 0.10403 3.72055 3.02131 3.65575 43 - -
26807 1.38629 1.38629 1.38629 1.38629
26808 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26809 44 3.44646 2.82292 3.48058 0.13020 44 - -
26810 1.38629 1.38629 1.38629 1.38629
26811 0.02973 4.22348 4.22348 1.46634 0.26236 1.09861 0.40547
26812 45 0.10403 3.72055 3.02131 3.65575 45 - -
26813 1.38629 1.38629 1.38629 1.38629
26814 0.01498 4.20873 * 1.46634 0.26236 0.00000 *
26815 //
26816 HMMER3/b [3.0 | March 2010]
26817 NAME 4_LSU_Tracheophyta_4_LSU_start_ninea_long
26818 LENG 45
26819 ALPH DNA
26820 RF no
26821 CS no
26822 MAP yes
26823 DATE Sun Feb 19 00:12:04 2012
26824 NSEQ 2
26825 EFFN 2.000000
26826 CKSUM 3826483507
26827 STATS LOCAL MSV -7.6397 0.72761
26828 STATS LOCAL VITERBI -8.2800 0.72761
26829 STATS LOCAL FORWARD -3.2833 0.72761
26830 HMM A C G T
26831 m->m m->i m->d i->m i->i d->m d->d
26832 COMPO 1.34637 1.24605 1.37655 1.61078
26833 1.38629 1.38629 1.38629 1.38629
26834 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
26835 1 2.57915 2.25909 2.64442 0.28946 1 - -
26836 1.38629 1.38629 1.38629 1.38629
26837 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26838 2 2.81865 0.23582 2.88868 2.35662 2 - -
26839 1.38629 1.38629 1.38629 1.38629
26840 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26841 3 2.53331 3.02441 0.20344 2.88069 3 - -
26842 1.38629 1.38629 1.38629 1.38629
26843 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26844 4 0.23862 2.84929 2.43386 2.70756 4 - -
26845 1.38629 1.38629 1.38629 1.38629
26846 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26847 5 2.53331 3.02441 0.20344 2.88069 5 - -
26848 1.38629 1.38629 1.38629 1.38629
26849 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26850 6 0.23862 2.84929 2.43386 2.70756 6 - -
26851 1.38629 1.38629 1.38629 1.38629
26852 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26853 7 2.81865 0.23582 2.88868 2.35662 7 - -
26854 1.38629 1.38629 1.38629 1.38629
26855 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26856 8 2.81865 0.23582 2.88868 2.35662 8 - -
26857 1.38629 1.38629 1.38629 1.38629
26858 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26859 9 2.81865 0.23582 2.88868 2.35662 9 - -
26860 1.38629 1.38629 1.38629 1.38629
26861 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26862 10 2.81865 0.23582 2.88868 2.35662 10 - -
26863 1.38629 1.38629 1.38629 1.38629
26864 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26865 11 0.23862 2.84929 2.43386 2.70756 11 - -
26866 1.38629 1.38629 1.38629 1.38629
26867 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26868 12 2.53331 3.02441 0.20344 2.88069 12 - -
26869 1.38629 1.38629 1.38629 1.38629
26870 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26871 13 2.53331 3.02441 0.20344 2.88069 13 - -
26872 1.38629 1.38629 1.38629 1.38629
26873 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26874 14 2.81865 0.23582 2.88868 2.35662 14 - -
26875 1.38629 1.38629 1.38629 1.38629
26876 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26877 15 2.81865 0.23582 2.88868 2.35662 15 - -
26878 1.38629 1.38629 1.38629 1.38629
26879 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26880 16 0.23862 2.84929 2.43386 2.70756 16 - -
26881 1.38629 1.38629 1.38629 1.38629
26882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26883 17 2.53331 3.02441 0.20344 2.88069 17 - -
26884 1.38629 1.38629 1.38629 1.38629
26885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26886 18 2.57915 2.25909 2.64442 0.28946 18 - -
26887 1.38629 1.38629 1.38629 1.38629
26888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26889 19 2.81865 0.23582 2.88868 2.35662 19 - -
26890 1.38629 1.38629 1.38629 1.38629
26891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26892 20 2.53331 3.02441 0.20344 2.88069 20 - -
26893 1.38629 1.38629 1.38629 1.38629
26894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26895 21 2.53331 3.02441 0.20344 2.88069 21 - -
26896 1.38629 1.38629 1.38629 1.38629
26897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26898 22 2.53331 3.02441 0.20344 2.88069 22 - -
26899 1.38629 1.38629 1.38629 1.38629
26900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26901 23 0.23862 2.84929 2.43386 2.70756 23 - -
26902 1.38629 1.38629 1.38629 1.38629
26903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26904 24 2.81865 0.23582 2.88868 2.35662 24 - -
26905 1.38629 1.38629 1.38629 1.38629
26906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26907 25 2.57915 2.25909 2.64442 0.28946 25 - -
26908 1.38629 1.38629 1.38629 1.38629
26909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26910 26 0.23862 2.84929 2.43386 2.70756 26 - -
26911 1.38629 1.38629 1.38629 1.38629
26912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26913 27 2.81865 0.23582 2.88868 2.35662 27 - -
26914 1.38629 1.38629 1.38629 1.38629
26915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26916 28 2.81865 0.23582 2.88868 2.35662 28 - -
26917 1.38629 1.38629 1.38629 1.38629
26918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26919 29 2.81865 0.23582 2.88868 2.35662 29 - -
26920 1.38629 1.38629 1.38629 1.38629
26921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26922 30 2.53331 3.02441 0.20344 2.88069 30 - -
26923 1.38629 1.38629 1.38629 1.38629
26924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26925 31 2.81865 0.23582 2.88868 2.35662 31 - -
26926 1.38629 1.38629 1.38629 1.38629
26927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26928 32 2.57915 2.25909 2.64442 0.28946 32 - -
26929 1.38629 1.38629 1.38629 1.38629
26930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26931 33 2.53331 3.02441 0.20344 2.88069 33 - -
26932 1.38629 1.38629 1.38629 1.38629
26933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26934 34 0.23862 2.84929 2.43386 2.70756 34 - -
26935 1.38629 1.38629 1.38629 1.38629
26936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26937 35 0.23862 2.84929 2.43386 2.70756 35 - -
26938 1.38629 1.38629 1.38629 1.38629
26939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26940 36 2.57915 2.25909 2.64442 0.28946 36 - -
26941 1.38629 1.38629 1.38629 1.38629
26942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26943 37 2.57915 2.25909 2.64442 0.28946 37 - -
26944 1.38629 1.38629 1.38629 1.38629
26945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26946 38 2.57915 2.25909 2.64442 0.28946 38 - -
26947 1.38629 1.38629 1.38629 1.38629
26948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26949 39 0.23862 2.84929 2.43386 2.70756 39 - -
26950 1.38629 1.38629 1.38629 1.38629
26951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26952 40 0.23862 2.84929 2.43386 2.70756 40 - -
26953 1.38629 1.38629 1.38629 1.38629
26954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26955 41 2.53331 3.02441 0.20344 2.88069 41 - -
26956 1.38629 1.38629 1.38629 1.38629
26957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26958 42 2.81865 0.23582 2.88868 2.35662 42 - -
26959 1.38629 1.38629 1.38629 1.38629
26960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26961 43 0.23862 2.84929 2.43386 2.70756 43 - -
26962 1.38629 1.38629 1.38629 1.38629
26963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26964 44 2.57915 2.25909 2.64442 0.28946 44 - -
26965 1.38629 1.38629 1.38629 1.38629
26966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
26967 45 0.23862 2.84929 2.43386 2.70756 45 - -
26968 1.38629 1.38629 1.38629 1.38629
26969 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
26970 //
26971 HMMER3/b [3.0 | March 2010]
26972 NAME 4_LSU_Tracheophyta_4_LSU_start_nineb_long
26973 LENG 45
26974 ALPH DNA
26975 RF no
26976 CS no
26977 MAP yes
26978 DATE Sun Feb 19 00:12:11 2012
26979 NSEQ 18
26980 EFFN 3.133301
26981 CKSUM 1046412576
26982 STATS LOCAL MSV -8.2028 0.71931
26983 STATS LOCAL VITERBI -7.6692 0.71931
26984 STATS LOCAL FORWARD -4.0356 0.71931
26985 HMM A C G T
26986 m->m m->i m->d i->m i->i d->m d->d
26987 COMPO 1.47236 1.33687 1.14083 1.66921
26988 1.38629 1.38629 1.38629 1.38629
26989 0.03822 3.97656 3.97656 1.46634 0.26236 0.00000 *
26990 1 0.15045 3.31767 2.76107 3.21348 1 - -
26991 1.38629 1.38629 1.38629 1.38629
26992 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
26993 2 3.36085 0.13917 3.41331 2.77609 2 - -
26994 1.38629 1.38629 1.38629 1.38629
26995 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
26996 3 2.90335 3.52386 0.12440 3.42200 3 - -
26997 1.38629 1.38629 1.38629 1.38629
26998 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
26999 4 2.90335 3.52386 0.12440 3.42200 4 - -
27000 1.38629 1.38629 1.38629 1.38629
27001 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27002 5 2.90335 3.52386 0.12440 3.42200 5 - -
27003 1.38629 1.38629 1.38629 1.38629
27004 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27005 6 0.15045 3.31767 2.76107 3.21348 6 - -
27006 1.38629 1.38629 1.38629 1.38629
27007 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27008 7 3.36085 0.13917 3.41331 2.77609 7 - -
27009 1.38629 1.38629 1.38629 1.38629
27010 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27011 8 3.36085 0.13917 3.41331 2.77609 8 - -
27012 1.38629 1.38629 1.38629 1.38629
27013 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27014 9 3.02586 2.55514 3.07640 0.18913 9 - -
27015 1.38629 1.38629 1.38629 1.38629
27016 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27017 10 3.36085 0.13917 3.41331 2.77609 10 - -
27018 1.38629 1.38629 1.38629 1.38629
27019 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27020 11 0.15045 3.31767 2.76107 3.21348 11 - -
27021 1.38629 1.38629 1.38629 1.38629
27022 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27023 12 2.90335 3.52386 0.12440 3.42200 12 - -
27024 1.38629 1.38629 1.38629 1.38629
27025 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27026 13 2.90335 3.52386 0.12440 3.42200 13 - -
27027 1.38629 1.38629 1.38629 1.38629
27028 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27029 14 3.02586 2.55514 3.07640 0.18913 14 - -
27030 1.38629 1.38629 1.38629 1.38629
27031 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27032 15 3.36085 0.13917 3.41331 2.77609 15 - -
27033 1.38629 1.38629 1.38629 1.38629
27034 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27035 16 0.15045 3.31767 2.76107 3.21348 16 - -
27036 1.38629 1.38629 1.38629 1.38629
27037 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27038 17 2.90335 3.52386 0.12440 3.42200 17 - -
27039 1.38629 1.38629 1.38629 1.38629
27040 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27041 18 2.90335 3.52386 0.12440 3.42200 18 - -
27042 1.38629 1.38629 1.38629 1.38629
27043 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27044 19 3.36085 0.13917 3.41331 2.77609 19 - -
27045 1.38629 1.38629 1.38629 1.38629
27046 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27047 20 2.90335 3.52386 0.12440 3.42200 20 - -
27048 1.38629 1.38629 1.38629 1.38629
27049 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27050 21 2.90335 3.52386 0.12440 3.42200 21 - -
27051 1.38629 1.38629 1.38629 1.38629
27052 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27053 22 2.90335 3.52386 0.12440 3.42200 22 - -
27054 1.38629 1.38629 1.38629 1.38629
27055 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27056 23 2.90335 3.52386 0.12440 3.42200 23 - -
27057 1.38629 1.38629 1.38629 1.38629
27058 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27059 24 3.36085 0.13917 3.41331 2.77609 24 - -
27060 1.38629 1.38629 1.38629 1.38629
27061 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27062 25 3.02586 2.55514 3.07640 0.18913 25 - -
27063 1.38629 1.38629 1.38629 1.38629
27064 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27065 26 0.15045 3.31767 2.76107 3.21348 26 - -
27066 1.38629 1.38629 1.38629 1.38629
27067 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27068 27 3.36085 0.13917 3.41331 2.77609 27 - -
27069 1.38629 1.38629 1.38629 1.38629
27070 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27071 28 3.36085 0.13917 3.41331 2.77609 28 - -
27072 1.38629 1.38629 1.38629 1.38629
27073 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27074 29 3.36085 0.13917 3.41331 2.77609 29 - -
27075 1.38629 1.38629 1.38629 1.38629
27076 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27077 30 2.90335 3.52386 0.12440 3.42200 30 - -
27078 1.38629 1.38629 1.38629 1.38629
27079 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27080 31 3.36085 0.13917 3.41331 2.77609 31 - -
27081 1.38629 1.38629 1.38629 1.38629
27082 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27083 32 3.02586 2.55514 3.07640 0.18913 32 - -
27084 1.38629 1.38629 1.38629 1.38629
27085 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27086 33 2.90335 3.52386 0.12440 3.42200 33 - -
27087 1.38629 1.38629 1.38629 1.38629
27088 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27089 34 0.15045 3.31767 2.76107 3.21348 34 - -
27090 1.38629 1.38629 1.38629 1.38629
27091 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27092 35 2.90335 3.52386 0.12440 3.42200 35 - -
27093 1.38629 1.38629 1.38629 1.38629
27094 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27095 36 3.02586 2.55514 3.07640 0.18913 36 - -
27096 1.38629 1.38629 1.38629 1.38629
27097 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27098 37 3.02586 2.55514 3.07640 0.18913 37 - -
27099 1.38629 1.38629 1.38629 1.38629
27100 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27101 38 3.02586 2.55514 3.07640 0.18913 38 - -
27102 1.38629 1.38629 1.38629 1.38629
27103 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27104 39 0.15045 3.31767 2.76107 3.21348 39 - -
27105 1.38629 1.38629 1.38629 1.38629
27106 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27107 40 0.15045 3.31767 2.76107 3.21348 40 - -
27108 1.38629 1.38629 1.38629 1.38629
27109 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27110 41 2.90335 3.52386 0.12440 3.42200 41 - -
27111 1.38629 1.38629 1.38629 1.38629
27112 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27113 42 3.36085 0.13917 3.41331 2.77609 42 - -
27114 1.38629 1.38629 1.38629 1.38629
27115 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27116 43 0.15045 3.31767 2.76107 3.21348 43 - -
27117 1.38629 1.38629 1.38629 1.38629
27118 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27119 44 3.02586 2.55514 3.07640 0.18913 44 - -
27120 1.38629 1.38629 1.38629 1.38629
27121 0.03822 3.97656 3.97656 1.46634 0.26236 1.09861 0.40547
27122 45 0.15045 3.31767 2.76107 3.21348 45 - -
27123 1.38629 1.38629 1.38629 1.38629
27124 0.01929 3.95763 * 1.46634 0.26236 0.00000 *
27125 //
27126 HMMER3/b [3.0 | March 2010]
27127 NAME 4_LSU_Tracheophyta_4_LSU_start_ninec_long
27128 LENG 45
27129 ALPH DNA
27130 RF no
27131 CS no
27132 MAP yes
27133 DATE Sun Feb 19 00:12:17 2012
27134 NSEQ 28
27135 EFFN 3.195801
27136 CKSUM 3247683125
27137 STATS LOCAL MSV -8.1990 0.71931
27138 STATS LOCAL VITERBI -7.6999 0.71931
27139 STATS LOCAL FORWARD -3.8686 0.71931
27140 HMM A C G T
27141 m->m m->i m->d i->m i->i d->m d->d
27142 COMPO 1.48734 1.27164 1.19063 1.66271
27143 1.38629 1.38629 1.38629 1.38629
27144 0.03777 3.98821 3.98821 1.46634 0.26236 0.00000 *
27145 1 0.31838 2.86951 1.88725 2.74175 1 - -
27146 1.38629 1.38629 1.38629 1.38629
27147 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27148 2 3.04692 2.56858 3.09666 0.18555 2 - -
27149 1.38629 1.38629 1.38629 1.38629
27150 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27151 3 2.91836 3.54548 0.12189 3.44581 3 - -
27152 1.38629 1.38629 1.38629 1.38629
27153 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27154 4 3.38523 0.13607 3.43670 2.79401 4 - -
27155 1.38629 1.38629 1.38629 1.38629
27156 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27157 5 2.91836 3.54548 0.12189 3.44581 5 - -
27158 1.38629 1.38629 1.38629 1.38629
27159 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27160 6 0.14750 3.33877 2.77489 3.23653 6 - -
27161 1.38629 1.38629 1.38629 1.38629
27162 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27163 7 3.38523 0.13607 3.43670 2.79401 7 - -
27164 1.38629 1.38629 1.38629 1.38629
27165 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27166 8 3.38523 0.13607 3.43670 2.79401 8 - -
27167 1.38629 1.38629 1.38629 1.38629
27168 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27169 9 3.38523 0.13607 3.43670 2.79401 9 - -
27170 1.38629 1.38629 1.38629 1.38629
27171 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27172 10 3.38523 0.13607 3.43670 2.79401 10 - -
27173 1.38629 1.38629 1.38629 1.38629
27174 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27175 11 0.14750 3.33877 2.77489 3.23653 11 - -
27176 1.38629 1.38629 1.38629 1.38629
27177 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27178 12 2.91836 3.54548 0.12189 3.44581 12 - -
27179 1.38629 1.38629 1.38629 1.38629
27180 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27181 13 2.91836 3.54548 0.12189 3.44581 13 - -
27182 1.38629 1.38629 1.38629 1.38629
27183 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27184 14 3.04692 2.56858 3.09666 0.18555 14 - -
27185 1.38629 1.38629 1.38629 1.38629
27186 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27187 15 3.38523 0.13607 3.43670 2.79401 15 - -
27188 1.38629 1.38629 1.38629 1.38629
27189 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27190 16 0.14750 3.33877 2.77489 3.23653 16 - -
27191 1.38629 1.38629 1.38629 1.38629
27192 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27193 17 2.91836 3.54548 0.12189 3.44581 17 - -
27194 1.38629 1.38629 1.38629 1.38629
27195 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27196 18 2.91836 3.54548 0.12189 3.44581 18 - -
27197 1.38629 1.38629 1.38629 1.38629
27198 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27199 19 3.38523 0.13607 3.43670 2.79401 19 - -
27200 1.38629 1.38629 1.38629 1.38629
27201 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27202 20 2.91836 3.54548 0.12189 3.44581 20 - -
27203 1.38629 1.38629 1.38629 1.38629
27204 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27205 21 2.91836 3.54548 0.12189 3.44581 21 - -
27206 1.38629 1.38629 1.38629 1.38629
27207 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27208 22 2.91836 3.54548 0.12189 3.44581 22 - -
27209 1.38629 1.38629 1.38629 1.38629
27210 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27211 23 2.91836 3.54548 0.12189 3.44581 23 - -
27212 1.38629 1.38629 1.38629 1.38629
27213 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27214 24 3.38523 0.13607 3.43670 2.79401 24 - -
27215 1.38629 1.38629 1.38629 1.38629
27216 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27217 25 3.04692 2.56858 3.09666 0.18555 25 - -
27218 1.38629 1.38629 1.38629 1.38629
27219 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27220 26 0.14750 3.33877 2.77489 3.23653 26 - -
27221 1.38629 1.38629 1.38629 1.38629
27222 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27223 27 3.38523 0.13607 3.43670 2.79401 27 - -
27224 1.38629 1.38629 1.38629 1.38629
27225 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27226 28 3.38523 0.13607 3.43670 2.79401 28 - -
27227 1.38629 1.38629 1.38629 1.38629
27228 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27229 29 3.38523 0.13607 3.43670 2.79401 29 - -
27230 1.38629 1.38629 1.38629 1.38629
27231 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27232 30 2.91836 3.54548 0.12189 3.44581 30 - -
27233 1.38629 1.38629 1.38629 1.38629
27234 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27235 31 3.38523 0.13607 3.43670 2.79401 31 - -
27236 1.38629 1.38629 1.38629 1.38629
27237 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27238 32 3.04692 2.56858 3.09666 0.18555 32 - -
27239 1.38629 1.38629 1.38629 1.38629
27240 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27241 33 2.91836 3.54548 0.12189 3.44581 33 - -
27242 1.38629 1.38629 1.38629 1.38629
27243 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27244 34 0.14750 3.33877 2.77489 3.23653 34 - -
27245 1.38629 1.38629 1.38629 1.38629
27246 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27247 35 2.91836 3.54548 0.12189 3.44581 35 - -
27248 1.38629 1.38629 1.38629 1.38629
27249 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27250 36 3.04692 2.56858 3.09666 0.18555 36 - -
27251 1.38629 1.38629 1.38629 1.38629
27252 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27253 37 3.04692 2.56858 3.09666 0.18555 37 - -
27254 1.38629 1.38629 1.38629 1.38629
27255 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27256 38 3.04692 2.56858 3.09666 0.18555 38 - -
27257 1.38629 1.38629 1.38629 1.38629
27258 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27259 39 0.14750 3.33877 2.77489 3.23653 39 - -
27260 1.38629 1.38629 1.38629 1.38629
27261 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27262 40 0.14750 3.33877 2.77489 3.23653 40 - -
27263 1.38629 1.38629 1.38629 1.38629
27264 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27265 41 2.91836 3.54548 0.12189 3.44581 41 - -
27266 1.38629 1.38629 1.38629 1.38629
27267 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27268 42 3.38523 0.13607 3.43670 2.79401 42 - -
27269 1.38629 1.38629 1.38629 1.38629
27270 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27271 43 0.14750 3.33877 2.77489 3.23653 43 - -
27272 1.38629 1.38629 1.38629 1.38629
27273 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27274 44 3.04692 2.56858 3.09666 0.18555 44 - -
27275 1.38629 1.38629 1.38629 1.38629
27276 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547
27277 45 0.14750 3.33877 2.77489 3.23653 45 - -
27278 1.38629 1.38629 1.38629 1.38629
27279 0.01906 3.96950 * 1.46634 0.26236 0.00000 *
27280 //
27281 HMMER3/b [3.0 | March 2010]
27282 NAME 4_LSU_Tracheophyta_4_LSU_start_nined_long
27283 LENG 45
27284 ALPH DNA
27285 RF no
27286 CS no
27287 MAP yes
27288 DATE Sun Feb 19 00:12:22 2012
27289 NSEQ 2
27290 EFFN 2.000000
27291 CKSUM 1933484248
27292 STATS LOCAL MSV -7.3520 0.72782
27293 STATS LOCAL VITERBI -8.2066 0.72782
27294 STATS LOCAL FORWARD -3.1788 0.72782
27295 HMM A C G T
27296 m->m m->i m->d i->m i->i d->m d->d
27297 COMPO 1.29226 1.29514 1.43530 1.54437
27298 1.38629 1.38629 1.38629 1.38629
27299 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
27300 1 2.57915 2.25909 2.64442 0.28946 1 - -
27301 1.38629 1.38629 1.38629 1.38629
27302 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27303 2 2.57915 2.25909 2.64442 0.28946 2 - -
27304 1.38629 1.38629 1.38629 1.38629
27305 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27306 3 2.53331 3.02441 0.20344 2.88069 3 - -
27307 1.38629 1.38629 1.38629 1.38629
27308 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27309 4 2.81865 0.23582 2.88868 2.35662 4 - -
27310 1.38629 1.38629 1.38629 1.38629
27311 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27312 5 0.23862 2.84929 2.43386 2.70756 5 - -
27313 1.38629 1.38629 1.38629 1.38629
27314 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27315 6 0.23862 2.84929 2.43386 2.70756 6 - -
27316 1.38629 1.38629 1.38629 1.38629
27317 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27318 7 2.81865 0.23582 2.88868 2.35662 7 - -
27319 1.38629 1.38629 1.38629 1.38629
27320 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27321 8 2.81865 0.23582 2.88868 2.35662 8 - -
27322 1.38629 1.38629 1.38629 1.38629
27323 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27324 9 2.81865 0.23582 2.88868 2.35662 9 - -
27325 1.38629 1.38629 1.38629 1.38629
27326 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27327 10 2.81865 0.23582 2.88868 2.35662 10 - -
27328 1.38629 1.38629 1.38629 1.38629
27329 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27330 11 0.23862 2.84929 2.43386 2.70756 11 - -
27331 1.38629 1.38629 1.38629 1.38629
27332 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27333 12 0.23862 2.84929 2.43386 2.70756 12 - -
27334 1.38629 1.38629 1.38629 1.38629
27335 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27336 13 2.53331 3.02441 0.20344 2.88069 13 - -
27337 1.38629 1.38629 1.38629 1.38629
27338 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27339 14 2.57915 2.25909 2.64442 0.28946 14 - -
27340 1.38629 1.38629 1.38629 1.38629
27341 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27342 15 2.81865 0.23582 2.88868 2.35662 15 - -
27343 1.38629 1.38629 1.38629 1.38629
27344 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27345 16 0.23862 2.84929 2.43386 2.70756 16 - -
27346 1.38629 1.38629 1.38629 1.38629
27347 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27348 17 2.53331 3.02441 0.20344 2.88069 17 - -
27349 1.38629 1.38629 1.38629 1.38629
27350 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27351 18 2.53331 3.02441 0.20344 2.88069 18 - -
27352 1.38629 1.38629 1.38629 1.38629
27353 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27354 19 2.57915 2.25909 2.64442 0.28946 19 - -
27355 1.38629 1.38629 1.38629 1.38629
27356 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27357 20 2.53331 3.02441 0.20344 2.88069 20 - -
27358 1.38629 1.38629 1.38629 1.38629
27359 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27360 21 2.53331 3.02441 0.20344 2.88069 21 - -
27361 1.38629 1.38629 1.38629 1.38629
27362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27363 22 2.53331 3.02441 0.20344 2.88069 22 - -
27364 1.38629 1.38629 1.38629 1.38629
27365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27366 23 0.23862 2.84929 2.43386 2.70756 23 - -
27367 1.38629 1.38629 1.38629 1.38629
27368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27369 24 2.81865 0.23582 2.88868 2.35662 24 - -
27370 1.38629 1.38629 1.38629 1.38629
27371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27372 25 2.57915 2.25909 2.64442 0.28946 25 - -
27373 1.38629 1.38629 1.38629 1.38629
27374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27375 26 0.23862 2.84929 2.43386 2.70756 26 - -
27376 1.38629 1.38629 1.38629 1.38629
27377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27378 27 2.81865 0.23582 2.88868 2.35662 27 - -
27379 1.38629 1.38629 1.38629 1.38629
27380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27381 28 2.81865 0.23582 2.88868 2.35662 28 - -
27382 1.38629 1.38629 1.38629 1.38629
27383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27384 29 2.81865 0.23582 2.88868 2.35662 29 - -
27385 1.38629 1.38629 1.38629 1.38629
27386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27387 30 2.53331 3.02441 0.20344 2.88069 30 - -
27388 1.38629 1.38629 1.38629 1.38629
27389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27390 31 2.81865 0.23582 2.88868 2.35662 31 - -
27391 1.38629 1.38629 1.38629 1.38629
27392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27393 32 2.57915 2.25909 2.64442 0.28946 32 - -
27394 1.38629 1.38629 1.38629 1.38629
27395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27396 33 2.53331 3.02441 0.20344 2.88069 33 - -
27397 1.38629 1.38629 1.38629 1.38629
27398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27399 34 0.23862 2.84929 2.43386 2.70756 34 - -
27400 1.38629 1.38629 1.38629 1.38629
27401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27402 35 0.23862 2.84929 2.43386 2.70756 35 - -
27403 1.38629 1.38629 1.38629 1.38629
27404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27405 36 2.81865 0.23582 2.88868 2.35662 36 - -
27406 1.38629 1.38629 1.38629 1.38629
27407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27408 37 2.57915 2.25909 2.64442 0.28946 37 - -
27409 1.38629 1.38629 1.38629 1.38629
27410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27411 38 2.57915 2.25909 2.64442 0.28946 38 - -
27412 1.38629 1.38629 1.38629 1.38629
27413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27414 39 0.23862 2.84929 2.43386 2.70756 39 - -
27415 1.38629 1.38629 1.38629 1.38629
27416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27417 40 0.23862 2.84929 2.43386 2.70756 40 - -
27418 1.38629 1.38629 1.38629 1.38629
27419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27420 41 2.53331 3.02441 0.20344 2.88069 41 - -
27421 1.38629 1.38629 1.38629 1.38629
27422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27423 42 2.81865 0.23582 2.88868 2.35662 42 - -
27424 1.38629 1.38629 1.38629 1.38629
27425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27426 43 0.23862 2.84929 2.43386 2.70756 43 - -
27427 1.38629 1.38629 1.38629 1.38629
27428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27429 44 2.57915 2.25909 2.64442 0.28946 44 - -
27430 1.38629 1.38629 1.38629 1.38629
27431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
27432 45 0.23862 2.84929 2.43386 2.70756 45 - -
27433 1.38629 1.38629 1.38629 1.38629
27434 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
27435 //
27436 HMMER3/b [3.0 | March 2010]
27437 NAME 4_LSU_Tracheophyta_4_LSU_start_ninee_long
27438 LENG 45
27439 ALPH DNA
27440 RF no
27441 CS no
27442 MAP yes
27443 DATE Sun Feb 19 00:12:27 2012
27444 NSEQ 4
27445 EFFN 3.152344
27446 CKSUM 2253024799
27447 STATS LOCAL MSV -8.1865 0.71933
27448 STATS LOCAL VITERBI -7.7862 0.71933
27449 STATS LOCAL FORWARD -3.8179 0.71933
27450 HMM A C G T
27451 m->m m->i m->d i->m i->i d->m d->d
27452 COMPO 1.33648 1.33706 1.25226 1.66730
27453 1.38629 1.38629 1.38629 1.38629
27454 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 *
27455 1 0.14954 3.32415 2.76532 3.22056 1 - -
27456 1.38629 1.38629 1.38629 1.38629
27457 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27458 2 0.14954 3.32415 2.76532 3.22056 2 - -
27459 1.38629 1.38629 1.38629 1.38629
27460 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27461 3 2.90797 3.53050 0.12362 3.42932 3 - -
27462 1.38629 1.38629 1.38629 1.38629
27463 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27464 4 3.03232 2.55926 3.08260 0.18802 4 - -
27465 1.38629 1.38629 1.38629 1.38629
27466 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27467 5 2.90797 3.53050 0.12362 3.42932 5 - -
27468 1.38629 1.38629 1.38629 1.38629
27469 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27470 6 0.14954 3.32415 2.76532 3.22056 6 - -
27471 1.38629 1.38629 1.38629 1.38629
27472 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27473 7 3.36834 0.13821 3.42049 2.78160 7 - -
27474 1.38629 1.38629 1.38629 1.38629
27475 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27476 8 3.36834 0.13821 3.42049 2.78160 8 - -
27477 1.38629 1.38629 1.38629 1.38629
27478 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27479 9 3.36834 0.13821 3.42049 2.78160 9 - -
27480 1.38629 1.38629 1.38629 1.38629
27481 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27482 10 3.36834 0.13821 3.42049 2.78160 10 - -
27483 1.38629 1.38629 1.38629 1.38629
27484 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27485 11 0.14954 3.32415 2.76532 3.22056 11 - -
27486 1.38629 1.38629 1.38629 1.38629
27487 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27488 12 2.90797 3.53050 0.12362 3.42932 12 - -
27489 1.38629 1.38629 1.38629 1.38629
27490 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27491 13 2.90797 3.53050 0.12362 3.42932 13 - -
27492 1.38629 1.38629 1.38629 1.38629
27493 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27494 14 3.03232 2.55926 3.08260 0.18802 14 - -
27495 1.38629 1.38629 1.38629 1.38629
27496 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27497 15 3.36834 0.13821 3.42049 2.78160 15 - -
27498 1.38629 1.38629 1.38629 1.38629
27499 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27500 16 0.14954 3.32415 2.76532 3.22056 16 - -
27501 1.38629 1.38629 1.38629 1.38629
27502 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27503 17 2.90797 3.53050 0.12362 3.42932 17 - -
27504 1.38629 1.38629 1.38629 1.38629
27505 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27506 18 2.90797 3.53050 0.12362 3.42932 18 - -
27507 1.38629 1.38629 1.38629 1.38629
27508 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27509 19 3.36834 0.13821 3.42049 2.78160 19 - -
27510 1.38629 1.38629 1.38629 1.38629
27511 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27512 20 2.90797 3.53050 0.12362 3.42932 20 - -
27513 1.38629 1.38629 1.38629 1.38629
27514 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27515 21 2.90797 3.53050 0.12362 3.42932 21 - -
27516 1.38629 1.38629 1.38629 1.38629
27517 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27518 22 2.90797 3.53050 0.12362 3.42932 22 - -
27519 1.38629 1.38629 1.38629 1.38629
27520 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27521 23 0.14954 3.32415 2.76532 3.22056 23 - -
27522 1.38629 1.38629 1.38629 1.38629
27523 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27524 24 3.36834 0.13821 3.42049 2.78160 24 - -
27525 1.38629 1.38629 1.38629 1.38629
27526 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27527 25 3.03232 2.55926 3.08260 0.18802 25 - -
27528 1.38629 1.38629 1.38629 1.38629
27529 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27530 26 0.14954 3.32415 2.76532 3.22056 26 - -
27531 1.38629 1.38629 1.38629 1.38629
27532 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27533 27 3.36834 0.13821 3.42049 2.78160 27 - -
27534 1.38629 1.38629 1.38629 1.38629
27535 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27536 28 3.36834 0.13821 3.42049 2.78160 28 - -
27537 1.38629 1.38629 1.38629 1.38629
27538 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27539 29 3.36834 0.13821 3.42049 2.78160 29 - -
27540 1.38629 1.38629 1.38629 1.38629
27541 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27542 30 2.90797 3.53050 0.12362 3.42932 30 - -
27543 1.38629 1.38629 1.38629 1.38629
27544 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27545 31 3.36834 0.13821 3.42049 2.78160 31 - -
27546 1.38629 1.38629 1.38629 1.38629
27547 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27548 32 3.03232 2.55926 3.08260 0.18802 32 - -
27549 1.38629 1.38629 1.38629 1.38629
27550 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27551 33 2.90797 3.53050 0.12362 3.42932 33 - -
27552 1.38629 1.38629 1.38629 1.38629
27553 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27554 34 0.14954 3.32415 2.76532 3.22056 34 - -
27555 1.38629 1.38629 1.38629 1.38629
27556 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27557 35 2.90797 3.53050 0.12362 3.42932 35 - -
27558 1.38629 1.38629 1.38629 1.38629
27559 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27560 36 3.03232 2.55926 3.08260 0.18802 36 - -
27561 1.38629 1.38629 1.38629 1.38629
27562 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27563 37 3.03232 2.55926 3.08260 0.18802 37 - -
27564 1.38629 1.38629 1.38629 1.38629
27565 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27566 38 3.03232 2.55926 3.08260 0.18802 38 - -
27567 1.38629 1.38629 1.38629 1.38629
27568 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27569 39 0.14954 3.32415 2.76532 3.22056 39 - -
27570 1.38629 1.38629 1.38629 1.38629
27571 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27572 40 0.14954 3.32415 2.76532 3.22056 40 - -
27573 1.38629 1.38629 1.38629 1.38629
27574 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27575 41 2.90797 3.53050 0.12362 3.42932 41 - -
27576 1.38629 1.38629 1.38629 1.38629
27577 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27578 42 3.36834 0.13821 3.42049 2.78160 42 - -
27579 1.38629 1.38629 1.38629 1.38629
27580 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27581 43 0.14954 3.32415 2.76532 3.22056 43 - -
27582 1.38629 1.38629 1.38629 1.38629
27583 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27584 44 3.03232 2.55926 3.08260 0.18802 44 - -
27585 1.38629 1.38629 1.38629 1.38629
27586 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547
27587 45 0.14954 3.32415 2.76532 3.22056 45 - -
27588 1.38629 1.38629 1.38629 1.38629
27589 0.01922 3.96126 * 1.46634 0.26236 0.00000 *
27590 //
27591 HMMER3/b [3.0 | March 2010]
27592 NAME 4_LSU_Tracheophyta_4_LSU_start_ninef_long
27593 LENG 45
27594 ALPH DNA
27595 RF no
27596 CS no
27597 MAP yes
27598 DATE Sun Feb 19 00:12:35 2012
27599 NSEQ 11
27600 EFFN 3.182373
27601 CKSUM 2259734906
27602 STATS LOCAL MSV -8.2662 0.71933
27603 STATS LOCAL VITERBI -7.7504 0.71933
27604 STATS LOCAL FORWARD -3.8026 0.71933
27605 HMM A C G T
27606 m->m m->i m->d i->m i->i d->m d->d
27607 COMPO 1.41753 1.21361 1.24880 1.75034
27608 1.38629 1.38629 1.38629 1.38629
27609 0.03787 3.98571 3.98571 1.46634 0.26236 0.00000 *
27610 1 0.14812 3.33427 2.77195 3.23162 1 - -
27611 1.38629 1.38629 1.38629 1.38629
27612 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27613 2 3.38004 0.13672 3.43172 2.79020 2 - -
27614 1.38629 1.38629 1.38629 1.38629
27615 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27616 3 2.91517 3.54088 0.12242 3.44074 3 - -
27617 1.38629 1.38629 1.38629 1.38629
27618 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27619 4 3.38004 0.13672 3.43172 2.79020 4 - -
27620 1.38629 1.38629 1.38629 1.38629
27621 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27622 5 2.91517 3.54088 0.12242 3.44074 5 - -
27623 1.38629 1.38629 1.38629 1.38629
27624 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27625 6 0.14812 3.33427 2.77195 3.23162 6 - -
27626 1.38629 1.38629 1.38629 1.38629
27627 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27628 7 3.38004 0.13672 3.43172 2.79020 7 - -
27629 1.38629 1.38629 1.38629 1.38629
27630 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27631 8 3.38004 0.13672 3.43172 2.79020 8 - -
27632 1.38629 1.38629 1.38629 1.38629
27633 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27634 9 3.38004 0.13672 3.43172 2.79020 9 - -
27635 1.38629 1.38629 1.38629 1.38629
27636 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27637 10 3.38004 0.13672 3.43172 2.79020 10 - -
27638 1.38629 1.38629 1.38629 1.38629
27639 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27640 11 0.14812 3.33427 2.77195 3.23162 11 - -
27641 1.38629 1.38629 1.38629 1.38629
27642 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27643 12 2.91517 3.54088 0.12242 3.44074 12 - -
27644 1.38629 1.38629 1.38629 1.38629
27645 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27646 13 2.91517 3.54088 0.12242 3.44074 13 - -
27647 1.38629 1.38629 1.38629 1.38629
27648 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27649 14 3.04242 2.56572 3.09233 0.18630 14 - -
27650 1.38629 1.38629 1.38629 1.38629
27651 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27652 15 3.38004 0.13672 3.43172 2.79020 15 - -
27653 1.38629 1.38629 1.38629 1.38629
27654 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27655 16 0.14812 3.33427 2.77195 3.23162 16 - -
27656 1.38629 1.38629 1.38629 1.38629
27657 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27658 17 0.32282 2.85901 1.87473 2.73070 17 - -
27659 1.38629 1.38629 1.38629 1.38629
27660 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27661 18 2.91517 3.54088 0.12242 3.44074 18 - -
27662 1.38629 1.38629 1.38629 1.38629
27663 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27664 19 3.38004 0.13672 3.43172 2.79020 19 - -
27665 1.38629 1.38629 1.38629 1.38629
27666 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27667 20 2.91517 3.54088 0.12242 3.44074 20 - -
27668 1.38629 1.38629 1.38629 1.38629
27669 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27670 21 2.91517 3.54088 0.12242 3.44074 21 - -
27671 1.38629 1.38629 1.38629 1.38629
27672 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27673 22 2.91517 3.54088 0.12242 3.44074 22 - -
27674 1.38629 1.38629 1.38629 1.38629
27675 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27676 23 2.91517 3.54088 0.12242 3.44074 23 - -
27677 1.38629 1.38629 1.38629 1.38629
27678 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27679 24 3.38004 0.13672 3.43172 2.79020 24 - -
27680 1.38629 1.38629 1.38629 1.38629
27681 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27682 25 3.04242 2.56572 3.09233 0.18630 25 - -
27683 1.38629 1.38629 1.38629 1.38629
27684 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27685 26 0.14812 3.33427 2.77195 3.23162 26 - -
27686 1.38629 1.38629 1.38629 1.38629
27687 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27688 27 3.38004 0.13672 3.43172 2.79020 27 - -
27689 1.38629 1.38629 1.38629 1.38629
27690 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27691 28 3.38004 0.13672 3.43172 2.79020 28 - -
27692 1.38629 1.38629 1.38629 1.38629
27693 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27694 29 3.38004 0.13672 3.43172 2.79020 29 - -
27695 1.38629 1.38629 1.38629 1.38629
27696 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27697 30 2.91517 3.54088 0.12242 3.44074 30 - -
27698 1.38629 1.38629 1.38629 1.38629
27699 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27700 31 3.38004 0.13672 3.43172 2.79020 31 - -
27701 1.38629 1.38629 1.38629 1.38629
27702 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27703 32 3.04242 2.56572 3.09233 0.18630 32 - -
27704 1.38629 1.38629 1.38629 1.38629
27705 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27706 33 2.91517 3.54088 0.12242 3.44074 33 - -
27707 1.38629 1.38629 1.38629 1.38629
27708 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27709 34 0.14812 3.33427 2.77195 3.23162 34 - -
27710 1.38629 1.38629 1.38629 1.38629
27711 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27712 35 2.91517 3.54088 0.12242 3.44074 35 - -
27713 1.38629 1.38629 1.38629 1.38629
27714 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27715 36 3.04242 2.56572 3.09233 0.18630 36 - -
27716 1.38629 1.38629 1.38629 1.38629
27717 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27718 37 3.04242 2.56572 3.09233 0.18630 37 - -
27719 1.38629 1.38629 1.38629 1.38629
27720 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27721 38 3.04242 2.56572 3.09233 0.18630 38 - -
27722 1.38629 1.38629 1.38629 1.38629
27723 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27724 39 0.14812 3.33427 2.77195 3.23162 39 - -
27725 1.38629 1.38629 1.38629 1.38629
27726 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27727 40 0.14812 3.33427 2.77195 3.23162 40 - -
27728 1.38629 1.38629 1.38629 1.38629
27729 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27730 41 2.91517 3.54088 0.12242 3.44074 41 - -
27731 1.38629 1.38629 1.38629 1.38629
27732 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27733 42 3.38004 0.13672 3.43172 2.79020 42 - -
27734 1.38629 1.38629 1.38629 1.38629
27735 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27736 43 0.14812 3.33427 2.77195 3.23162 43 - -
27737 1.38629 1.38629 1.38629 1.38629
27738 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27739 44 3.04242 2.56572 3.09233 0.18630 44 - -
27740 1.38629 1.38629 1.38629 1.38629
27741 0.03787 3.98571 3.98571 1.46634 0.26236 1.09861 0.40547
27742 45 0.14812 3.33427 2.77195 3.23162 45 - -
27743 1.38629 1.38629 1.38629 1.38629
27744 0.01911 3.96696 * 1.46634 0.26236 0.00000 *
27745 //
27746 HMMER3/b [3.0 | March 2010]
27747 NAME 4_LSU_Tracheophyta_4_LSU_start_nineg_long
27748 LENG 45
27749 ALPH DNA
27750 RF no
27751 CS no
27752 MAP yes
27753 DATE Sun Feb 19 00:12:40 2012
27754 NSEQ 3
27755 EFFN 3.000000
27756 CKSUM 3180213690
27757 STATS LOCAL MSV -7.9951 0.71983
27758 STATS LOCAL VITERBI -7.7998 0.71983
27759 STATS LOCAL FORWARD -3.7258 0.71983
27760 HMM A C G T
27761 m->m m->i m->d i->m i->i d->m d->d
27762 COMPO 1.33644 1.34183 1.19530 1.75307
27763 1.38629 1.38629 1.38629 1.38629
27764 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
27765 1 0.15719 3.27118 2.73043 3.16274 1 - -
27766 1.38629 1.38629 1.38629 1.38629
27767 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27768 2 0.15719 3.27118 2.73043 3.16274 2 - -
27769 1.38629 1.38629 1.38629 1.38629
27770 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27771 3 2.86982 3.47591 0.13017 3.36931 3 - -
27772 1.38629 1.38629 1.38629 1.38629
27773 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27774 4 3.30705 0.14631 3.36166 2.73626 4 - -
27775 1.38629 1.38629 1.38629 1.38629
27776 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27777 5 2.86982 3.47591 0.13017 3.36931 5 - -
27778 1.38629 1.38629 1.38629 1.38629
27779 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27780 6 0.15719 3.27118 2.73043 3.16274 6 - -
27781 1.38629 1.38629 1.38629 1.38629
27782 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27783 7 3.30705 0.14631 3.36166 2.73626 7 - -
27784 1.38629 1.38629 1.38629 1.38629
27785 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27786 8 3.30705 0.14631 3.36166 2.73626 8 - -
27787 1.38629 1.38629 1.38629 1.38629
27788 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27789 9 3.30705 0.14631 3.36166 2.73626 9 - -
27790 1.38629 1.38629 1.38629 1.38629
27791 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27792 10 3.30705 0.14631 3.36166 2.73626 10 - -
27793 1.38629 1.38629 1.38629 1.38629
27794 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27795 11 0.15719 3.27118 2.73043 3.16274 11 - -
27796 1.38629 1.38629 1.38629 1.38629
27797 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27798 12 2.86982 3.47591 0.13017 3.36931 12 - -
27799 1.38629 1.38629 1.38629 1.38629
27800 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27801 13 2.86982 3.47591 0.13017 3.36931 13 - -
27802 1.38629 1.38629 1.38629 1.38629
27803 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27804 14 2.97980 2.52563 3.03204 0.19727 14 - -
27805 1.38629 1.38629 1.38629 1.38629
27806 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27807 15 3.30705 0.14631 3.36166 2.73626 15 - -
27808 1.38629 1.38629 1.38629 1.38629
27809 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27810 16 0.15719 3.27118 2.73043 3.16274 16 - -
27811 1.38629 1.38629 1.38629 1.38629
27812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27813 17 2.86982 3.47591 0.13017 3.36931 17 - -
27814 1.38629 1.38629 1.38629 1.38629
27815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27816 18 2.86982 3.47591 0.13017 3.36931 18 - -
27817 1.38629 1.38629 1.38629 1.38629
27818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27819 19 3.30705 0.14631 3.36166 2.73626 19 - -
27820 1.38629 1.38629 1.38629 1.38629
27821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27822 20 2.86982 3.47591 0.13017 3.36931 20 - -
27823 1.38629 1.38629 1.38629 1.38629
27824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27825 21 2.86982 3.47591 0.13017 3.36931 21 - -
27826 1.38629 1.38629 1.38629 1.38629
27827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27828 22 2.86982 3.47591 0.13017 3.36931 22 - -
27829 1.38629 1.38629 1.38629 1.38629
27830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27831 23 2.86982 3.47591 0.13017 3.36931 23 - -
27832 1.38629 1.38629 1.38629 1.38629
27833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27834 24 0.15719 3.27118 2.73043 3.16274 24 - -
27835 1.38629 1.38629 1.38629 1.38629
27836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27837 25 2.97980 2.52563 3.03204 0.19727 25 - -
27838 1.38629 1.38629 1.38629 1.38629
27839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27840 26 0.15719 3.27118 2.73043 3.16274 26 - -
27841 1.38629 1.38629 1.38629 1.38629
27842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27843 27 3.30705 0.14631 3.36166 2.73626 27 - -
27844 1.38629 1.38629 1.38629 1.38629
27845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27846 28 3.30705 0.14631 3.36166 2.73626 28 - -
27847 1.38629 1.38629 1.38629 1.38629
27848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27849 29 3.30705 0.14631 3.36166 2.73626 29 - -
27850 1.38629 1.38629 1.38629 1.38629
27851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27852 30 2.86982 3.47591 0.13017 3.36931 30 - -
27853 1.38629 1.38629 1.38629 1.38629
27854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27855 31 3.30705 0.14631 3.36166 2.73626 31 - -
27856 1.38629 1.38629 1.38629 1.38629
27857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27858 32 2.97980 2.52563 3.03204 0.19727 32 - -
27859 1.38629 1.38629 1.38629 1.38629
27860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27861 33 2.86982 3.47591 0.13017 3.36931 33 - -
27862 1.38629 1.38629 1.38629 1.38629
27863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27864 34 0.15719 3.27118 2.73043 3.16274 34 - -
27865 1.38629 1.38629 1.38629 1.38629
27866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27867 35 2.86982 3.47591 0.13017 3.36931 35 - -
27868 1.38629 1.38629 1.38629 1.38629
27869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27870 36 2.97980 2.52563 3.03204 0.19727 36 - -
27871 1.38629 1.38629 1.38629 1.38629
27872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27873 37 2.97980 2.52563 3.03204 0.19727 37 - -
27874 1.38629 1.38629 1.38629 1.38629
27875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27876 38 2.97980 2.52563 3.03204 0.19727 38 - -
27877 1.38629 1.38629 1.38629 1.38629
27878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27879 39 0.15719 3.27118 2.73043 3.16274 39 - -
27880 1.38629 1.38629 1.38629 1.38629
27881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27882 40 0.15719 3.27118 2.73043 3.16274 40 - -
27883 1.38629 1.38629 1.38629 1.38629
27884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27885 41 2.86982 3.47591 0.13017 3.36931 41 - -
27886 1.38629 1.38629 1.38629 1.38629
27887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27888 42 3.30705 0.14631 3.36166 2.73626 42 - -
27889 1.38629 1.38629 1.38629 1.38629
27890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27891 43 0.15719 3.27118 2.73043 3.16274 43 - -
27892 1.38629 1.38629 1.38629 1.38629
27893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27894 44 2.97980 2.52563 3.03204 0.19727 44 - -
27895 1.38629 1.38629 1.38629 1.38629
27896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
27897 45 0.15719 3.27118 2.73043 3.16274 45 - -
27898 1.38629 1.38629 1.38629 1.38629
27899 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
27900 //
27901 HMMER3/b [3.0 | March 2010]
27902 NAME 4_LSU_Tracheophyta_4_LSU_start_nineh_long
27903 LENG 45
27904 ALPH DNA
27905 RF no
27906 CS no
27907 MAP yes
27908 DATE Sun Feb 19 00:12:45 2012
27909 NSEQ 5
27910 EFFN 3.168945
27911 CKSUM 177826028
27912 STATS LOCAL MSV -8.0764 0.71931
27913 STATS LOCAL VITERBI -7.7650 0.71931
27914 STATS LOCAL FORWARD -3.8765 0.71931
27915 HMM A C G T
27916 m->m m->i m->d i->m i->i d->m d->d
27917 COMPO 1.47768 1.27000 1.25567 1.57931
27918 1.38629 1.38629 1.38629 1.38629
27919 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 *
27920 1 3.03791 2.56284 3.08799 0.18707 1 - -
27921 1.38629 1.38629 1.38629 1.38629
27922 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27923 2 3.03791 2.56284 3.08799 0.18707 2 - -
27924 1.38629 1.38629 1.38629 1.38629
27925 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27926 3 2.91196 3.53626 0.12295 3.43565 3 - -
27927 1.38629 1.38629 1.38629 1.38629
27928 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27929 4 3.37482 0.13738 3.42671 2.78637 4 - -
27930 1.38629 1.38629 1.38629 1.38629
27931 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27932 5 2.91196 3.53626 0.12295 3.43565 5 - -
27933 1.38629 1.38629 1.38629 1.38629
27934 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27935 6 0.14875 3.32976 2.76899 3.22669 6 - -
27936 1.38629 1.38629 1.38629 1.38629
27937 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27938 7 3.37482 0.13738 3.42671 2.78637 7 - -
27939 1.38629 1.38629 1.38629 1.38629
27940 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27941 8 3.37482 0.13738 3.42671 2.78637 8 - -
27942 1.38629 1.38629 1.38629 1.38629
27943 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27944 9 3.37482 0.13738 3.42671 2.78637 9 - -
27945 1.38629 1.38629 1.38629 1.38629
27946 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27947 10 3.37482 0.13738 3.42671 2.78637 10 - -
27948 1.38629 1.38629 1.38629 1.38629
27949 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27950 11 0.14875 3.32976 2.76899 3.22669 11 - -
27951 1.38629 1.38629 1.38629 1.38629
27952 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27953 12 2.91196 3.53626 0.12295 3.43565 12 - -
27954 1.38629 1.38629 1.38629 1.38629
27955 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27956 13 2.91196 3.53626 0.12295 3.43565 13 - -
27957 1.38629 1.38629 1.38629 1.38629
27958 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27959 14 3.03791 2.56284 3.08799 0.18707 14 - -
27960 1.38629 1.38629 1.38629 1.38629
27961 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27962 15 3.37482 0.13738 3.42671 2.78637 15 - -
27963 1.38629 1.38629 1.38629 1.38629
27964 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27965 16 0.14875 3.32976 2.76899 3.22669 16 - -
27966 1.38629 1.38629 1.38629 1.38629
27967 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27968 17 2.91196 3.53626 0.12295 3.43565 17 - -
27969 1.38629 1.38629 1.38629 1.38629
27970 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27971 18 2.91196 3.53626 0.12295 3.43565 18 - -
27972 1.38629 1.38629 1.38629 1.38629
27973 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27974 19 3.37482 0.13738 3.42671 2.78637 19 - -
27975 1.38629 1.38629 1.38629 1.38629
27976 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27977 20 2.91196 3.53626 0.12295 3.43565 20 - -
27978 1.38629 1.38629 1.38629 1.38629
27979 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27980 21 2.91196 3.53626 0.12295 3.43565 21 - -
27981 1.38629 1.38629 1.38629 1.38629
27982 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27983 22 2.91196 3.53626 0.12295 3.43565 22 - -
27984 1.38629 1.38629 1.38629 1.38629
27985 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27986 23 0.14875 3.32976 2.76899 3.22669 23 - -
27987 1.38629 1.38629 1.38629 1.38629
27988 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27989 24 3.03791 2.56284 3.08799 0.18707 24 - -
27990 1.38629 1.38629 1.38629 1.38629
27991 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27992 25 3.37482 0.13738 3.42671 2.78637 25 - -
27993 1.38629 1.38629 1.38629 1.38629
27994 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27995 26 0.14875 3.32976 2.76899 3.22669 26 - -
27996 1.38629 1.38629 1.38629 1.38629
27997 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
27998 27 3.37482 0.13738 3.42671 2.78637 27 - -
27999 1.38629 1.38629 1.38629 1.38629
28000 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28001 28 3.37482 0.13738 3.42671 2.78637 28 - -
28002 1.38629 1.38629 1.38629 1.38629
28003 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28004 29 3.37482 0.13738 3.42671 2.78637 29 - -
28005 1.38629 1.38629 1.38629 1.38629
28006 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28007 30 2.91196 3.53626 0.12295 3.43565 30 - -
28008 1.38629 1.38629 1.38629 1.38629
28009 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28010 31 3.37482 0.13738 3.42671 2.78637 31 - -
28011 1.38629 1.38629 1.38629 1.38629
28012 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28013 32 3.03791 2.56284 3.08799 0.18707 32 - -
28014 1.38629 1.38629 1.38629 1.38629
28015 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28016 33 2.91196 3.53626 0.12295 3.43565 33 - -
28017 1.38629 1.38629 1.38629 1.38629
28018 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28019 34 0.14875 3.32976 2.76899 3.22669 34 - -
28020 1.38629 1.38629 1.38629 1.38629
28021 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28022 35 2.91196 3.53626 0.12295 3.43565 35 - -
28023 1.38629 1.38629 1.38629 1.38629
28024 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28025 36 3.03791 2.56284 3.08799 0.18707 36 - -
28026 1.38629 1.38629 1.38629 1.38629
28027 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28028 37 3.03791 2.56284 3.08799 0.18707 37 - -
28029 1.38629 1.38629 1.38629 1.38629
28030 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28031 38 3.03791 2.56284 3.08799 0.18707 38 - -
28032 1.38629 1.38629 1.38629 1.38629
28033 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28034 39 0.14875 3.32976 2.76899 3.22669 39 - -
28035 1.38629 1.38629 1.38629 1.38629
28036 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28037 40 0.14875 3.32976 2.76899 3.22669 40 - -
28038 1.38629 1.38629 1.38629 1.38629
28039 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28040 41 2.91196 3.53626 0.12295 3.43565 41 - -
28041 1.38629 1.38629 1.38629 1.38629
28042 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28043 42 3.37482 0.13738 3.42671 2.78637 42 - -
28044 1.38629 1.38629 1.38629 1.38629
28045 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28046 43 0.14875 3.32976 2.76899 3.22669 43 - -
28047 1.38629 1.38629 1.38629 1.38629
28048 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28049 44 3.03791 2.56284 3.08799 0.18707 44 - -
28050 1.38629 1.38629 1.38629 1.38629
28051 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28052 45 0.14875 3.32976 2.76899 3.22669 45 - -
28053 1.38629 1.38629 1.38629 1.38629
28054 0.01916 3.96442 * 1.46634 0.26236 0.00000 *
28055 //
28056 HMMER3/b [3.0 | March 2010]
28057 NAME 4_LSU_Tracheophyta_4_LSU_start_ninei_long
28058 LENG 45
28059 ALPH DNA
28060 RF no
28061 CS no
28062 MAP yes
28063 DATE Sun Feb 19 00:12:50 2012
28064 NSEQ 7
28065 EFFN 3.120605
28066 CKSUM 2734349611
28067 STATS LOCAL MSV -8.1916 0.71933
28068 STATS LOCAL VITERBI -7.7361 0.71933
28069 STATS LOCAL FORWARD -3.7364 0.71933
28070 HMM A C G T
28071 m->m m->i m->d i->m i->i d->m d->d
28072 COMPO 1.47980 1.15880 1.25782 1.74766
28073 1.38629 1.38629 1.38629 1.38629
28074 0.03831 3.97417 3.97417 1.46634 0.26236 0.00000 *
28075 1 3.35584 0.13982 3.40850 2.77239 1 - -
28076 1.38629 1.38629 1.38629 1.38629
28077 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28078 2 3.35584 0.13982 3.40850 2.77239 2 - -
28079 1.38629 1.38629 1.38629 1.38629
28080 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28081 3 2.90025 3.51940 0.12492 3.41710 3 - -
28082 1.38629 1.38629 1.38629 1.38629
28083 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28084 4 3.02155 2.55238 3.07224 0.18988 4 - -
28085 1.38629 1.38629 1.38629 1.38629
28086 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28087 5 2.90025 3.51940 0.12492 3.41710 5 - -
28088 1.38629 1.38629 1.38629 1.38629
28089 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28090 6 0.15106 3.31333 2.75822 3.20874 6 - -
28091 1.38629 1.38629 1.38629 1.38629
28092 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28093 7 3.35584 0.13982 3.40850 2.77239 7 - -
28094 1.38629 1.38629 1.38629 1.38629
28095 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28096 8 3.35584 0.13982 3.40850 2.77239 8 - -
28097 1.38629 1.38629 1.38629 1.38629
28098 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28099 9 3.35584 0.13982 3.40850 2.77239 9 - -
28100 1.38629 1.38629 1.38629 1.38629
28101 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28102 10 3.35584 0.13982 3.40850 2.77239 10 - -
28103 1.38629 1.38629 1.38629 1.38629
28104 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28105 11 0.15106 3.31333 2.75822 3.20874 11 - -
28106 1.38629 1.38629 1.38629 1.38629
28107 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28108 12 2.90025 3.51940 0.12492 3.41710 12 - -
28109 1.38629 1.38629 1.38629 1.38629
28110 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28111 13 2.90025 3.51940 0.12492 3.41710 13 - -
28112 1.38629 1.38629 1.38629 1.38629
28113 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28114 14 3.02155 2.55238 3.07224 0.18988 14 - -
28115 1.38629 1.38629 1.38629 1.38629
28116 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28117 15 3.35584 0.13982 3.40850 2.77239 15 - -
28118 1.38629 1.38629 1.38629 1.38629
28119 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28120 16 0.15106 3.31333 2.75822 3.20874 16 - -
28121 1.38629 1.38629 1.38629 1.38629
28122 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28123 17 2.90025 3.51940 0.12492 3.41710 17 - -
28124 1.38629 1.38629 1.38629 1.38629
28125 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28126 18 2.90025 3.51940 0.12492 3.41710 18 - -
28127 1.38629 1.38629 1.38629 1.38629
28128 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28129 19 3.35584 0.13982 3.40850 2.77239 19 - -
28130 1.38629 1.38629 1.38629 1.38629
28131 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28132 20 2.90025 3.51940 0.12492 3.41710 20 - -
28133 1.38629 1.38629 1.38629 1.38629
28134 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28135 21 2.90025 3.51940 0.12492 3.41710 21 - -
28136 1.38629 1.38629 1.38629 1.38629
28137 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28138 22 2.90025 3.51940 0.12492 3.41710 22 - -
28139 1.38629 1.38629 1.38629 1.38629
28140 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28141 23 0.15106 3.31333 2.75822 3.20874 23 - -
28142 1.38629 1.38629 1.38629 1.38629
28143 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28144 24 3.35584 0.13982 3.40850 2.77239 24 - -
28145 1.38629 1.38629 1.38629 1.38629
28146 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28147 25 3.35584 0.13982 3.40850 2.77239 25 - -
28148 1.38629 1.38629 1.38629 1.38629
28149 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28150 26 0.15106 3.31333 2.75822 3.20874 26 - -
28151 1.38629 1.38629 1.38629 1.38629
28152 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28153 27 3.35584 0.13982 3.40850 2.77239 27 - -
28154 1.38629 1.38629 1.38629 1.38629
28155 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28156 28 3.35584 0.13982 3.40850 2.77239 28 - -
28157 1.38629 1.38629 1.38629 1.38629
28158 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28159 29 3.35584 0.13982 3.40850 2.77239 29 - -
28160 1.38629 1.38629 1.38629 1.38629
28161 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28162 30 2.90025 3.51940 0.12492 3.41710 30 - -
28163 1.38629 1.38629 1.38629 1.38629
28164 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28165 31 3.35584 0.13982 3.40850 2.77239 31 - -
28166 1.38629 1.38629 1.38629 1.38629
28167 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28168 32 3.02155 2.55238 3.07224 0.18988 32 - -
28169 1.38629 1.38629 1.38629 1.38629
28170 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28171 33 2.90025 3.51940 0.12492 3.41710 33 - -
28172 1.38629 1.38629 1.38629 1.38629
28173 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28174 34 0.15106 3.31333 2.75822 3.20874 34 - -
28175 1.38629 1.38629 1.38629 1.38629
28176 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28177 35 2.90025 3.51940 0.12492 3.41710 35 - -
28178 1.38629 1.38629 1.38629 1.38629
28179 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28180 36 3.02155 2.55238 3.07224 0.18988 36 - -
28181 1.38629 1.38629 1.38629 1.38629
28182 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28183 37 3.02155 2.55238 3.07224 0.18988 37 - -
28184 1.38629 1.38629 1.38629 1.38629
28185 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28186 38 3.02155 2.55238 3.07224 0.18988 38 - -
28187 1.38629 1.38629 1.38629 1.38629
28188 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28189 39 0.15106 3.31333 2.75822 3.20874 39 - -
28190 1.38629 1.38629 1.38629 1.38629
28191 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28192 40 0.15106 3.31333 2.75822 3.20874 40 - -
28193 1.38629 1.38629 1.38629 1.38629
28194 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28195 41 2.90025 3.51940 0.12492 3.41710 41 - -
28196 1.38629 1.38629 1.38629 1.38629
28197 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28198 42 3.35584 0.13982 3.40850 2.77239 42 - -
28199 1.38629 1.38629 1.38629 1.38629
28200 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28201 43 0.15106 3.31333 2.75822 3.20874 43 - -
28202 1.38629 1.38629 1.38629 1.38629
28203 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28204 44 3.02155 2.55238 3.07224 0.18988 44 - -
28205 1.38629 1.38629 1.38629 1.38629
28206 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547
28207 45 0.15106 3.31333 2.75822 3.20874 45 - -
28208 1.38629 1.38629 1.38629 1.38629
28209 0.01934 3.95520 * 1.46634 0.26236 0.00000 *
28210 //
28211 HMMER3/b [3.0 | March 2010]
28212 NAME 4_LSU_Tracheophyta_4_LSU_start_ninej_long
28213 LENG 45
28214 ALPH DNA
28215 RF no
28216 CS no
28217 MAP yes
28218 DATE Sun Feb 19 00:12:54 2012
28219 NSEQ 4
28220 EFFN 3.136719
28221 CKSUM 1347985792
28222 STATS LOCAL MSV -8.1185 0.71931
28223 STATS LOCAL VITERBI -7.6324 0.71931
28224 STATS LOCAL FORWARD -3.7644 0.71931
28225 HMM A C G T
28226 m->m m->i m->d i->m i->i d->m d->d
28227 COMPO 1.41001 1.15750 1.31861 1.74823
28228 1.38629 1.38629 1.38629 1.38629
28229 0.03820 3.97720 3.97720 1.46634 0.26236 0.00000 *
28230 1 3.36220 0.13900 3.41461 2.77708 1 - -
28231 1.38629 1.38629 1.38629 1.38629
28232 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28233 2 3.36220 0.13900 3.41461 2.77708 2 - -
28234 1.38629 1.38629 1.38629 1.38629
28235 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28236 3 2.90418 3.52506 0.12426 3.42332 3 - -
28237 1.38629 1.38629 1.38629 1.38629
28238 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28239 4 3.36220 0.13900 3.41461 2.77708 4 - -
28240 1.38629 1.38629 1.38629 1.38629
28241 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28242 5 2.90418 3.52506 0.12426 3.42332 5 - -
28243 1.38629 1.38629 1.38629 1.38629
28244 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28245 6 0.15028 3.31884 2.76184 3.21476 6 - -
28246 1.38629 1.38629 1.38629 1.38629
28247 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28248 7 3.36220 0.13900 3.41461 2.77708 7 - -
28249 1.38629 1.38629 1.38629 1.38629
28250 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28251 8 3.36220 0.13900 3.41461 2.77708 8 - -
28252 1.38629 1.38629 1.38629 1.38629
28253 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28254 9 3.36220 0.13900 3.41461 2.77708 9 - -
28255 1.38629 1.38629 1.38629 1.38629
28256 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28257 10 3.36220 0.13900 3.41461 2.77708 10 - -
28258 1.38629 1.38629 1.38629 1.38629
28259 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28260 11 0.15028 3.31884 2.76184 3.21476 11 - -
28261 1.38629 1.38629 1.38629 1.38629
28262 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28263 12 2.90418 3.52506 0.12426 3.42332 12 - -
28264 1.38629 1.38629 1.38629 1.38629
28265 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28266 13 2.90418 3.52506 0.12426 3.42332 13 - -
28267 1.38629 1.38629 1.38629 1.38629
28268 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28269 14 3.02702 2.55588 3.07751 0.18893 14 - -
28270 1.38629 1.38629 1.38629 1.38629
28271 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28272 15 3.36220 0.13900 3.41461 2.77708 15 - -
28273 1.38629 1.38629 1.38629 1.38629
28274 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28275 16 0.15028 3.31884 2.76184 3.21476 16 - -
28276 1.38629 1.38629 1.38629 1.38629
28277 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28278 17 2.90418 3.52506 0.12426 3.42332 17 - -
28279 1.38629 1.38629 1.38629 1.38629
28280 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28281 18 0.15028 3.31884 2.76184 3.21476 18 - -
28282 1.38629 1.38629 1.38629 1.38629
28283 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28284 19 3.36220 0.13900 3.41461 2.77708 19 - -
28285 1.38629 1.38629 1.38629 1.38629
28286 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28287 20 2.90418 3.52506 0.12426 3.42332 20 - -
28288 1.38629 1.38629 1.38629 1.38629
28289 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28290 21 2.90418 3.52506 0.12426 3.42332 21 - -
28291 1.38629 1.38629 1.38629 1.38629
28292 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28293 22 2.90418 3.52506 0.12426 3.42332 22 - -
28294 1.38629 1.38629 1.38629 1.38629
28295 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28296 23 0.15028 3.31884 2.76184 3.21476 23 - -
28297 1.38629 1.38629 1.38629 1.38629
28298 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28299 24 3.36220 0.13900 3.41461 2.77708 24 - -
28300 1.38629 1.38629 1.38629 1.38629
28301 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28302 25 3.02702 2.55588 3.07751 0.18893 25 - -
28303 1.38629 1.38629 1.38629 1.38629
28304 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28305 26 0.15028 3.31884 2.76184 3.21476 26 - -
28306 1.38629 1.38629 1.38629 1.38629
28307 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28308 27 3.36220 0.13900 3.41461 2.77708 27 - -
28309 1.38629 1.38629 1.38629 1.38629
28310 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28311 28 3.36220 0.13900 3.41461 2.77708 28 - -
28312 1.38629 1.38629 1.38629 1.38629
28313 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28314 29 3.36220 0.13900 3.41461 2.77708 29 - -
28315 1.38629 1.38629 1.38629 1.38629
28316 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28317 30 2.90418 3.52506 0.12426 3.42332 30 - -
28318 1.38629 1.38629 1.38629 1.38629
28319 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28320 31 3.36220 0.13900 3.41461 2.77708 31 - -
28321 1.38629 1.38629 1.38629 1.38629
28322 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28323 32 3.02702 2.55588 3.07751 0.18893 32 - -
28324 1.38629 1.38629 1.38629 1.38629
28325 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28326 33 2.90418 3.52506 0.12426 3.42332 33 - -
28327 1.38629 1.38629 1.38629 1.38629
28328 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28329 34 0.15028 3.31884 2.76184 3.21476 34 - -
28330 1.38629 1.38629 1.38629 1.38629
28331 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28332 35 2.90418 3.52506 0.12426 3.42332 35 - -
28333 1.38629 1.38629 1.38629 1.38629
28334 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28335 36 3.02702 2.55588 3.07751 0.18893 36 - -
28336 1.38629 1.38629 1.38629 1.38629
28337 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28338 37 3.02702 2.55588 3.07751 0.18893 37 - -
28339 1.38629 1.38629 1.38629 1.38629
28340 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28341 38 3.02702 2.55588 3.07751 0.18893 38 - -
28342 1.38629 1.38629 1.38629 1.38629
28343 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28344 39 0.15028 3.31884 2.76184 3.21476 39 - -
28345 1.38629 1.38629 1.38629 1.38629
28346 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28347 40 0.15028 3.31884 2.76184 3.21476 40 - -
28348 1.38629 1.38629 1.38629 1.38629
28349 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28350 41 2.90418 3.52506 0.12426 3.42332 41 - -
28351 1.38629 1.38629 1.38629 1.38629
28352 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28353 42 3.36220 0.13900 3.41461 2.77708 42 - -
28354 1.38629 1.38629 1.38629 1.38629
28355 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28356 43 0.15028 3.31884 2.76184 3.21476 43 - -
28357 1.38629 1.38629 1.38629 1.38629
28358 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28359 44 3.02702 2.55588 3.07751 0.18893 44 - -
28360 1.38629 1.38629 1.38629 1.38629
28361 0.03820 3.97720 3.97720 1.46634 0.26236 1.09861 0.40547
28362 45 0.15028 3.31884 2.76184 3.21476 45 - -
28363 1.38629 1.38629 1.38629 1.38629
28364 0.01928 3.95828 * 1.46634 0.26236 0.00000 *
28365 //
28366 HMMER3/b [3.0 | March 2010]
28367 NAME 4_LSU_Tracheophyta_4_LSU_start_ninek_long
28368 LENG 45
28369 ALPH DNA
28370 RF no
28371 CS no
28372 MAP yes
28373 DATE Sun Feb 19 00:13:05 2012
28374 NSEQ 9
28375 EFFN 3.265137
28376 CKSUM 2766384668
28377 STATS LOCAL MSV -8.1227 0.71931
28378 STATS LOCAL VITERBI -7.6635 0.71931
28379 STATS LOCAL FORWARD -3.7620 0.71931
28380 HMM A C G T
28381 m->m m->i m->d i->m i->i d->m d->d
28382 COMPO 1.50333 1.26598 1.24180 1.57607
28383 1.38629 1.38629 1.38629 1.38629
28384 0.03728 4.00097 4.00097 1.46634 0.26236 0.00000 *
28385 1 3.06987 2.58322 3.11874 0.18173 1 - -
28386 1.38629 1.38629 1.38629 1.38629
28387 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28388 2 3.06987 2.58322 3.11874 0.18173 2 - -
28389 1.38629 1.38629 1.38629 1.38629
28390 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28391 3 2.93451 3.56885 0.11925 3.47156 3 - -
28392 1.38629 1.38629 1.38629 1.38629
28393 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28394 4 3.41166 0.13280 3.46202 2.81336 4 - -
28395 1.38629 1.38629 1.38629 1.38629
28396 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28397 5 2.93451 3.56885 0.11925 3.47156 5 - -
28398 1.38629 1.38629 1.38629 1.38629
28399 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28400 6 0.14438 3.36166 2.78983 3.26157 6 - -
28401 1.38629 1.38629 1.38629 1.38629
28402 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28403 7 3.41166 0.13280 3.46202 2.81336 7 - -
28404 1.38629 1.38629 1.38629 1.38629
28405 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28406 8 3.41166 0.13280 3.46202 2.81336 8 - -
28407 1.38629 1.38629 1.38629 1.38629
28408 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28409 9 3.41166 0.13280 3.46202 2.81336 9 - -
28410 1.38629 1.38629 1.38629 1.38629
28411 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28412 10 3.41166 0.13280 3.46202 2.81336 10 - -
28413 1.38629 1.38629 1.38629 1.38629
28414 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28415 11 0.14438 3.36166 2.78983 3.26157 11 - -
28416 1.38629 1.38629 1.38629 1.38629
28417 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28418 12 2.93451 3.56885 0.11925 3.47156 12 - -
28419 1.38629 1.38629 1.38629 1.38629
28420 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28421 13 2.93451 3.56885 0.11925 3.47156 13 - -
28422 1.38629 1.38629 1.38629 1.38629
28423 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28424 14 3.06987 2.58322 3.11874 0.18173 14 - -
28425 1.38629 1.38629 1.38629 1.38629
28426 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28427 15 3.41166 0.13280 3.46202 2.81336 15 - -
28428 1.38629 1.38629 1.38629 1.38629
28429 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28430 16 0.14438 3.36166 2.78983 3.26157 16 - -
28431 1.38629 1.38629 1.38629 1.38629
28432 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28433 17 2.93451 3.56885 0.11925 3.47156 17 - -
28434 1.38629 1.38629 1.38629 1.38629
28435 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28436 18 2.93451 3.56885 0.11925 3.47156 18 - -
28437 1.38629 1.38629 1.38629 1.38629
28438 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28439 19 3.41166 0.13280 3.46202 2.81336 19 - -
28440 1.38629 1.38629 1.38629 1.38629
28441 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28442 20 0.52310 2.61815 1.38438 2.47807 20 - -
28443 1.38629 1.38629 1.38629 1.38629
28444 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28445 21 2.93451 3.56885 0.11925 3.47156 21 - -
28446 1.38629 1.38629 1.38629 1.38629
28447 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28448 22 2.93451 3.56885 0.11925 3.47156 22 - -
28449 1.38629 1.38629 1.38629 1.38629
28450 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28451 23 2.93451 3.56885 0.11925 3.47156 23 - -
28452 1.38629 1.38629 1.38629 1.38629
28453 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28454 24 3.41166 0.13280 3.46202 2.81336 24 - -
28455 1.38629 1.38629 1.38629 1.38629
28456 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28457 25 3.06987 2.58322 3.11874 0.18173 25 - -
28458 1.38629 1.38629 1.38629 1.38629
28459 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28460 26 0.14438 3.36166 2.78983 3.26157 26 - -
28461 1.38629 1.38629 1.38629 1.38629
28462 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28463 27 3.41166 0.13280 3.46202 2.81336 27 - -
28464 1.38629 1.38629 1.38629 1.38629
28465 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28466 28 3.41166 0.13280 3.46202 2.81336 28 - -
28467 1.38629 1.38629 1.38629 1.38629
28468 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28469 29 3.41166 0.13280 3.46202 2.81336 29 - -
28470 1.38629 1.38629 1.38629 1.38629
28471 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28472 30 2.93451 3.56885 0.11925 3.47156 30 - -
28473 1.38629 1.38629 1.38629 1.38629
28474 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28475 31 3.41166 0.13280 3.46202 2.81336 31 - -
28476 1.38629 1.38629 1.38629 1.38629
28477 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28478 32 3.06987 2.58322 3.11874 0.18173 32 - -
28479 1.38629 1.38629 1.38629 1.38629
28480 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28481 33 2.93451 3.56885 0.11925 3.47156 33 - -
28482 1.38629 1.38629 1.38629 1.38629
28483 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28484 34 0.14438 3.36166 2.78983 3.26157 34 - -
28485 1.38629 1.38629 1.38629 1.38629
28486 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28487 35 2.93451 3.56885 0.11925 3.47156 35 - -
28488 1.38629 1.38629 1.38629 1.38629
28489 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28490 36 3.06987 2.58322 3.11874 0.18173 36 - -
28491 1.38629 1.38629 1.38629 1.38629
28492 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28493 37 3.06987 2.58322 3.11874 0.18173 37 - -
28494 1.38629 1.38629 1.38629 1.38629
28495 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28496 38 3.06987 2.58322 3.11874 0.18173 38 - -
28497 1.38629 1.38629 1.38629 1.38629
28498 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28499 39 0.14438 3.36166 2.78983 3.26157 39 - -
28500 1.38629 1.38629 1.38629 1.38629
28501 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28502 40 0.14438 3.36166 2.78983 3.26157 40 - -
28503 1.38629 1.38629 1.38629 1.38629
28504 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28505 41 2.93451 3.56885 0.11925 3.47156 41 - -
28506 1.38629 1.38629 1.38629 1.38629
28507 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28508 42 3.41166 0.13280 3.46202 2.81336 42 - -
28509 1.38629 1.38629 1.38629 1.38629
28510 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28511 43 0.14438 3.36166 2.78983 3.26157 43 - -
28512 1.38629 1.38629 1.38629 1.38629
28513 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28514 44 3.06987 2.58322 3.11874 0.18173 44 - -
28515 1.38629 1.38629 1.38629 1.38629
28516 0.03728 4.00097 4.00097 1.46634 0.26236 1.09861 0.40547
28517 45 0.14438 3.36166 2.78983 3.26157 45 - -
28518 1.38629 1.38629 1.38629 1.38629
28519 0.01881 3.98251 * 1.46634 0.26236 0.00000 *
28520 //
28521 HMMER3/b [3.0 | March 2010]
28522 NAME 4_LSU_Tracheophyta_4_LSU_start_ninel_long
28523 LENG 45
28524 ALPH DNA
28525 RF no
28526 CS no
28527 MAP yes
28528 DATE Sun Feb 19 00:13:10 2012
28529 NSEQ 6
28530 EFFN 3.131836
28531 CKSUM 1499209124
28532 STATS LOCAL MSV -8.0603 0.71933
28533 STATS LOCAL VITERBI -7.7477 0.71933
28534 STATS LOCAL FORWARD -3.6468 0.71933
28535 HMM A C G T
28536 m->m m->i m->d i->m i->i d->m d->d
28537 COMPO 1.40997 1.15883 1.31859 1.74593
28538 1.38629 1.38629 1.38629 1.38629
28539 0.03823 3.97628 3.97628 1.46634 0.26236 0.00000 *
28540 1 3.36028 0.13924 3.41276 2.77566 1 - -
28541 1.38629 1.38629 1.38629 1.38629
28542 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28543 2 3.02537 2.55482 3.07592 0.18922 2 - -
28544 1.38629 1.38629 1.38629 1.38629
28545 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28546 3 2.90299 3.52335 0.12446 3.42144 3 - -
28547 1.38629 1.38629 1.38629 1.38629
28548 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28549 4 3.36028 0.13924 3.41276 2.77566 4 - -
28550 1.38629 1.38629 1.38629 1.38629
28551 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28552 5 2.90299 3.52335 0.12446 3.42144 5 - -
28553 1.38629 1.38629 1.38629 1.38629
28554 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28555 6 0.15052 3.31717 2.76074 3.21294 6 - -
28556 1.38629 1.38629 1.38629 1.38629
28557 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28558 7 3.36028 0.13924 3.41276 2.77566 7 - -
28559 1.38629 1.38629 1.38629 1.38629
28560 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28561 8 3.36028 0.13924 3.41276 2.77566 8 - -
28562 1.38629 1.38629 1.38629 1.38629
28563 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28564 9 3.36028 0.13924 3.41276 2.77566 9 - -
28565 1.38629 1.38629 1.38629 1.38629
28566 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28567 10 3.36028 0.13924 3.41276 2.77566 10 - -
28568 1.38629 1.38629 1.38629 1.38629
28569 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28570 11 0.15052 3.31717 2.76074 3.21294 11 - -
28571 1.38629 1.38629 1.38629 1.38629
28572 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28573 12 2.90299 3.52335 0.12446 3.42144 12 - -
28574 1.38629 1.38629 1.38629 1.38629
28575 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28576 13 2.90299 3.52335 0.12446 3.42144 13 - -
28577 1.38629 1.38629 1.38629 1.38629
28578 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28579 14 3.02537 2.55482 3.07592 0.18922 14 - -
28580 1.38629 1.38629 1.38629 1.38629
28581 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28582 15 3.36028 0.13924 3.41276 2.77566 15 - -
28583 1.38629 1.38629 1.38629 1.38629
28584 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28585 16 0.15052 3.31717 2.76074 3.21294 16 - -
28586 1.38629 1.38629 1.38629 1.38629
28587 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28588 17 2.90299 3.52335 0.12446 3.42144 17 - -
28589 1.38629 1.38629 1.38629 1.38629
28590 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28591 18 2.90299 3.52335 0.12446 3.42144 18 - -
28592 1.38629 1.38629 1.38629 1.38629
28593 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28594 19 3.36028 0.13924 3.41276 2.77566 19 - -
28595 1.38629 1.38629 1.38629 1.38629
28596 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28597 20 2.90299 3.52335 0.12446 3.42144 20 - -
28598 1.38629 1.38629 1.38629 1.38629
28599 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28600 21 2.90299 3.52335 0.12446 3.42144 21 - -
28601 1.38629 1.38629 1.38629 1.38629
28602 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28603 22 2.90299 3.52335 0.12446 3.42144 22 - -
28604 1.38629 1.38629 1.38629 1.38629
28605 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28606 23 0.15052 3.31717 2.76074 3.21294 23 - -
28607 1.38629 1.38629 1.38629 1.38629
28608 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28609 24 3.36028 0.13924 3.41276 2.77566 24 - -
28610 1.38629 1.38629 1.38629 1.38629
28611 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28612 25 3.36028 0.13924 3.41276 2.77566 25 - -
28613 1.38629 1.38629 1.38629 1.38629
28614 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28615 26 0.15052 3.31717 2.76074 3.21294 26 - -
28616 1.38629 1.38629 1.38629 1.38629
28617 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28618 27 3.36028 0.13924 3.41276 2.77566 27 - -
28619 1.38629 1.38629 1.38629 1.38629
28620 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28621 28 3.36028 0.13924 3.41276 2.77566 28 - -
28622 1.38629 1.38629 1.38629 1.38629
28623 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28624 29 3.36028 0.13924 3.41276 2.77566 29 - -
28625 1.38629 1.38629 1.38629 1.38629
28626 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28627 30 2.90299 3.52335 0.12446 3.42144 30 - -
28628 1.38629 1.38629 1.38629 1.38629
28629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28630 31 3.36028 0.13924 3.41276 2.77566 31 - -
28631 1.38629 1.38629 1.38629 1.38629
28632 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28633 32 3.02537 2.55482 3.07592 0.18922 32 - -
28634 1.38629 1.38629 1.38629 1.38629
28635 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28636 33 2.90299 3.52335 0.12446 3.42144 33 - -
28637 1.38629 1.38629 1.38629 1.38629
28638 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28639 34 0.15052 3.31717 2.76074 3.21294 34 - -
28640 1.38629 1.38629 1.38629 1.38629
28641 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28642 35 0.15052 3.31717 2.76074 3.21294 35 - -
28643 1.38629 1.38629 1.38629 1.38629
28644 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28645 36 3.02537 2.55482 3.07592 0.18922 36 - -
28646 1.38629 1.38629 1.38629 1.38629
28647 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28648 37 3.02537 2.55482 3.07592 0.18922 37 - -
28649 1.38629 1.38629 1.38629 1.38629
28650 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28651 38 3.02537 2.55482 3.07592 0.18922 38 - -
28652 1.38629 1.38629 1.38629 1.38629
28653 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28654 39 0.15052 3.31717 2.76074 3.21294 39 - -
28655 1.38629 1.38629 1.38629 1.38629
28656 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28657 40 0.15052 3.31717 2.76074 3.21294 40 - -
28658 1.38629 1.38629 1.38629 1.38629
28659 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28660 41 2.90299 3.52335 0.12446 3.42144 41 - -
28661 1.38629 1.38629 1.38629 1.38629
28662 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28663 42 3.36028 0.13924 3.41276 2.77566 42 - -
28664 1.38629 1.38629 1.38629 1.38629
28665 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28666 43 0.15052 3.31717 2.76074 3.21294 43 - -
28667 1.38629 1.38629 1.38629 1.38629
28668 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28669 44 3.02537 2.55482 3.07592 0.18922 44 - -
28670 1.38629 1.38629 1.38629 1.38629
28671 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547
28672 45 0.15052 3.31717 2.76074 3.21294 45 - -
28673 1.38629 1.38629 1.38629 1.38629
28674 0.01930 3.95735 * 1.46634 0.26236 0.00000 *
28675 //
28676 HMMER3/b [3.0 | March 2010]
28677 NAME 4_LSU_Tracheophyta_4_LSU_start_ninem_long
28678 LENG 45
28679 ALPH DNA
28680 RF no
28681 CS no
28682 MAP yes
28683 DATE Sun Feb 19 00:13:15 2012
28684 NSEQ 5
28685 EFFN 3.168945
28686 CKSUM 2727964424
28687 STATS LOCAL MSV -8.0675 0.71932
28688 STATS LOCAL VITERBI -7.7708 0.71932
28689 STATS LOCAL FORWARD -3.8493 0.71932
28690 HMM A C G T
28691 m->m m->i m->d i->m i->i d->m d->d
28692 COMPO 1.34344 1.21077 1.38248 1.66004
28693 1.38629 1.38629 1.38629 1.38629
28694 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 *
28695 1 3.37482 0.13738 3.42671 2.78637 1 - -
28696 1.38629 1.38629 1.38629 1.38629
28697 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28698 2 3.03791 2.56284 3.08799 0.18707 2 - -
28699 1.38629 1.38629 1.38629 1.38629
28700 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28701 3 2.91196 3.53626 0.12295 3.43565 3 - -
28702 1.38629 1.38629 1.38629 1.38629
28703 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28704 4 3.37482 0.13738 3.42671 2.78637 4 - -
28705 1.38629 1.38629 1.38629 1.38629
28706 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28707 5 2.91196 3.53626 0.12295 3.43565 5 - -
28708 1.38629 1.38629 1.38629 1.38629
28709 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28710 6 0.14875 3.32976 2.76899 3.22669 6 - -
28711 1.38629 1.38629 1.38629 1.38629
28712 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28713 7 3.37482 0.13738 3.42671 2.78637 7 - -
28714 1.38629 1.38629 1.38629 1.38629
28715 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28716 8 3.37482 0.13738 3.42671 2.78637 8 - -
28717 1.38629 1.38629 1.38629 1.38629
28718 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28719 9 3.37482 0.13738 3.42671 2.78637 9 - -
28720 1.38629 1.38629 1.38629 1.38629
28721 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28722 10 3.37482 0.13738 3.42671 2.78637 10 - -
28723 1.38629 1.38629 1.38629 1.38629
28724 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28725 11 0.14875 3.32976 2.76899 3.22669 11 - -
28726 1.38629 1.38629 1.38629 1.38629
28727 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28728 12 2.91196 3.53626 0.12295 3.43565 12 - -
28729 1.38629 1.38629 1.38629 1.38629
28730 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28731 13 2.91196 3.53626 0.12295 3.43565 13 - -
28732 1.38629 1.38629 1.38629 1.38629
28733 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28734 14 3.03791 2.56284 3.08799 0.18707 14 - -
28735 1.38629 1.38629 1.38629 1.38629
28736 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28737 15 3.37482 0.13738 3.42671 2.78637 15 - -
28738 1.38629 1.38629 1.38629 1.38629
28739 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28740 16 0.14875 3.32976 2.76899 3.22669 16 - -
28741 1.38629 1.38629 1.38629 1.38629
28742 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28743 17 0.14875 3.32976 2.76899 3.22669 17 - -
28744 1.38629 1.38629 1.38629 1.38629
28745 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28746 18 2.91196 3.53626 0.12295 3.43565 18 - -
28747 1.38629 1.38629 1.38629 1.38629
28748 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28749 19 3.37482 0.13738 3.42671 2.78637 19 - -
28750 1.38629 1.38629 1.38629 1.38629
28751 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28752 20 2.91196 3.53626 0.12295 3.43565 20 - -
28753 1.38629 1.38629 1.38629 1.38629
28754 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28755 21 2.91196 3.53626 0.12295 3.43565 21 - -
28756 1.38629 1.38629 1.38629 1.38629
28757 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28758 22 2.91196 3.53626 0.12295 3.43565 22 - -
28759 1.38629 1.38629 1.38629 1.38629
28760 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28761 23 0.14875 3.32976 2.76899 3.22669 23 - -
28762 1.38629 1.38629 1.38629 1.38629
28763 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28764 24 3.37482 0.13738 3.42671 2.78637 24 - -
28765 1.38629 1.38629 1.38629 1.38629
28766 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28767 25 3.03791 2.56284 3.08799 0.18707 25 - -
28768 1.38629 1.38629 1.38629 1.38629
28769 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28770 26 0.14875 3.32976 2.76899 3.22669 26 - -
28771 1.38629 1.38629 1.38629 1.38629
28772 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28773 27 3.37482 0.13738 3.42671 2.78637 27 - -
28774 1.38629 1.38629 1.38629 1.38629
28775 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28776 28 3.37482 0.13738 3.42671 2.78637 28 - -
28777 1.38629 1.38629 1.38629 1.38629
28778 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28779 29 3.37482 0.13738 3.42671 2.78637 29 - -
28780 1.38629 1.38629 1.38629 1.38629
28781 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28782 30 2.91196 3.53626 0.12295 3.43565 30 - -
28783 1.38629 1.38629 1.38629 1.38629
28784 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28785 31 3.37482 0.13738 3.42671 2.78637 31 - -
28786 1.38629 1.38629 1.38629 1.38629
28787 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28788 32 3.03791 2.56284 3.08799 0.18707 32 - -
28789 1.38629 1.38629 1.38629 1.38629
28790 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28791 33 2.91196 3.53626 0.12295 3.43565 33 - -
28792 1.38629 1.38629 1.38629 1.38629
28793 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28794 34 0.14875 3.32976 2.76899 3.22669 34 - -
28795 1.38629 1.38629 1.38629 1.38629
28796 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28797 35 0.14875 3.32976 2.76899 3.22669 35 - -
28798 1.38629 1.38629 1.38629 1.38629
28799 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28800 36 3.03791 2.56284 3.08799 0.18707 36 - -
28801 1.38629 1.38629 1.38629 1.38629
28802 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28803 37 3.03791 2.56284 3.08799 0.18707 37 - -
28804 1.38629 1.38629 1.38629 1.38629
28805 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28806 38 3.03791 2.56284 3.08799 0.18707 38 - -
28807 1.38629 1.38629 1.38629 1.38629
28808 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28809 39 0.14875 3.32976 2.76899 3.22669 39 - -
28810 1.38629 1.38629 1.38629 1.38629
28811 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28812 40 0.14875 3.32976 2.76899 3.22669 40 - -
28813 1.38629 1.38629 1.38629 1.38629
28814 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28815 41 2.91196 3.53626 0.12295 3.43565 41 - -
28816 1.38629 1.38629 1.38629 1.38629
28817 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28818 42 3.37482 0.13738 3.42671 2.78637 42 - -
28819 1.38629 1.38629 1.38629 1.38629
28820 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28821 43 0.14875 3.32976 2.76899 3.22669 43 - -
28822 1.38629 1.38629 1.38629 1.38629
28823 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28824 44 3.03791 2.56284 3.08799 0.18707 44 - -
28825 1.38629 1.38629 1.38629 1.38629
28826 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547
28827 45 0.14875 3.32976 2.76899 3.22669 45 - -
28828 1.38629 1.38629 1.38629 1.38629
28829 0.01916 3.96442 * 1.46634 0.26236 0.00000 *
28830 //
28831 HMMER3/b [3.0 | March 2010]
28832 NAME 4_LSU_Tracheophyta_4_LSU_start_ninen_long
28833 LENG 45
28834 ALPH DNA
28835 RF no
28836 CS no
28837 MAP yes
28838 DATE Sun Feb 19 00:13:23 2012
28839 NSEQ 4
28840 EFFN 3.230469
28841 CKSUM 2299958284
28842 STATS LOCAL MSV -8.1930 0.71932
28843 STATS LOCAL VITERBI -7.7386 0.71932
28844 STATS LOCAL FORWARD -3.7873 0.71932
28845 HMM A C G T
28846 m->m m->i m->d i->m i->i d->m d->d
28847 COMPO 1.46710 1.20843 1.27156 1.65891
28848 1.38629 1.38629 1.38629 1.38629
28849 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
28850 1 3.39853 0.13441 3.44944 2.80375 1 - -
28851 1.38629 1.38629 1.38629 1.38629
28852 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28853 2 3.05845 2.57594 3.10775 0.18362 2 - -
28854 1.38629 1.38629 1.38629 1.38629
28855 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28856 3 2.92650 3.55724 0.12055 3.45877 3 - -
28857 1.38629 1.38629 1.38629 1.38629
28858 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28859 4 3.39853 0.13441 3.44944 2.80375 4 - -
28860 1.38629 1.38629 1.38629 1.38629
28861 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28862 5 2.92650 3.55724 0.12055 3.45877 5 - -
28863 1.38629 1.38629 1.38629 1.38629
28864 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28865 6 0.14592 3.35028 2.78241 3.24912 6 - -
28866 1.38629 1.38629 1.38629 1.38629
28867 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28868 7 3.39853 0.13441 3.44944 2.80375 7 - -
28869 1.38629 1.38629 1.38629 1.38629
28870 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28871 8 3.39853 0.13441 3.44944 2.80375 8 - -
28872 1.38629 1.38629 1.38629 1.38629
28873 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28874 9 3.39853 0.13441 3.44944 2.80375 9 - -
28875 1.38629 1.38629 1.38629 1.38629
28876 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28877 10 3.39853 0.13441 3.44944 2.80375 10 - -
28878 1.38629 1.38629 1.38629 1.38629
28879 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28880 11 0.14592 3.35028 2.78241 3.24912 11 - -
28881 1.38629 1.38629 1.38629 1.38629
28882 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28883 12 2.92650 3.55724 0.12055 3.45877 12 - -
28884 1.38629 1.38629 1.38629 1.38629
28885 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28886 13 2.92650 3.55724 0.12055 3.45877 13 - -
28887 1.38629 1.38629 1.38629 1.38629
28888 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28889 14 3.05845 2.57594 3.10775 0.18362 14 - -
28890 1.38629 1.38629 1.38629 1.38629
28891 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28892 15 3.39853 0.13441 3.44944 2.80375 15 - -
28893 1.38629 1.38629 1.38629 1.38629
28894 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28895 16 0.14592 3.35028 2.78241 3.24912 16 - -
28896 1.38629 1.38629 1.38629 1.38629
28897 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28898 17 2.92650 3.55724 0.12055 3.45877 17 - -
28899 1.38629 1.38629 1.38629 1.38629
28900 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28901 18 1.65135 2.79903 0.38930 2.66201 18 - -
28902 1.38629 1.38629 1.38629 1.38629
28903 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28904 19 3.39853 0.13441 3.44944 2.80375 19 - -
28905 1.38629 1.38629 1.38629 1.38629
28906 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28907 20 2.92650 3.55724 0.12055 3.45877 20 - -
28908 1.38629 1.38629 1.38629 1.38629
28909 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28910 21 2.92650 3.55724 0.12055 3.45877 21 - -
28911 1.38629 1.38629 1.38629 1.38629
28912 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28913 22 2.92650 3.55724 0.12055 3.45877 22 - -
28914 1.38629 1.38629 1.38629 1.38629
28915 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28916 23 2.92650 3.55724 0.12055 3.45877 23 - -
28917 1.38629 1.38629 1.38629 1.38629
28918 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28919 24 3.39853 0.13441 3.44944 2.80375 24 - -
28920 1.38629 1.38629 1.38629 1.38629
28921 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28922 25 3.05845 2.57594 3.10775 0.18362 25 - -
28923 1.38629 1.38629 1.38629 1.38629
28924 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28925 26 0.14592 3.35028 2.78241 3.24912 26 - -
28926 1.38629 1.38629 1.38629 1.38629
28927 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28928 27 3.39853 0.13441 3.44944 2.80375 27 - -
28929 1.38629 1.38629 1.38629 1.38629
28930 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28931 28 3.39853 0.13441 3.44944 2.80375 28 - -
28932 1.38629 1.38629 1.38629 1.38629
28933 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28934 29 3.39853 0.13441 3.44944 2.80375 29 - -
28935 1.38629 1.38629 1.38629 1.38629
28936 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28937 30 2.92650 3.55724 0.12055 3.45877 30 - -
28938 1.38629 1.38629 1.38629 1.38629
28939 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28940 31 3.39853 0.13441 3.44944 2.80375 31 - -
28941 1.38629 1.38629 1.38629 1.38629
28942 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28943 32 3.05845 2.57594 3.10775 0.18362 32 - -
28944 1.38629 1.38629 1.38629 1.38629
28945 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28946 33 2.92650 3.55724 0.12055 3.45877 33 - -
28947 1.38629 1.38629 1.38629 1.38629
28948 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28949 34 0.14592 3.35028 2.78241 3.24912 34 - -
28950 1.38629 1.38629 1.38629 1.38629
28951 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28952 35 0.14592 3.35028 2.78241 3.24912 35 - -
28953 1.38629 1.38629 1.38629 1.38629
28954 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28955 36 3.05845 2.57594 3.10775 0.18362 36 - -
28956 1.38629 1.38629 1.38629 1.38629
28957 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28958 37 3.05845 2.57594 3.10775 0.18362 37 - -
28959 1.38629 1.38629 1.38629 1.38629
28960 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28961 38 3.05845 2.57594 3.10775 0.18362 38 - -
28962 1.38629 1.38629 1.38629 1.38629
28963 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28964 39 0.14592 3.35028 2.78241 3.24912 39 - -
28965 1.38629 1.38629 1.38629 1.38629
28966 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28967 40 0.14592 3.35028 2.78241 3.24912 40 - -
28968 1.38629 1.38629 1.38629 1.38629
28969 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28970 41 2.92650 3.55724 0.12055 3.45877 41 - -
28971 1.38629 1.38629 1.38629 1.38629
28972 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28973 42 3.39853 0.13441 3.44944 2.80375 42 - -
28974 1.38629 1.38629 1.38629 1.38629
28975 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28976 43 0.14592 3.35028 2.78241 3.24912 43 - -
28977 1.38629 1.38629 1.38629 1.38629
28978 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28979 44 3.05845 2.57594 3.10775 0.18362 44 - -
28980 1.38629 1.38629 1.38629 1.38629
28981 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
28982 45 0.14592 3.35028 2.78241 3.24912 45 - -
28983 1.38629 1.38629 1.38629 1.38629
28984 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
28985 //
28986 HMMER3/b [3.0 | March 2010]
28987 NAME 4_LSU_Tracheophyta_4_LSU_start_nineo_long
28988 LENG 45
28989 ALPH DNA
28990 RF no
28991 CS no
28992 MAP yes
28993 DATE Sun Feb 19 00:13:30 2012
28994 NSEQ 11
28995 EFFN 3.440186
28996 CKSUM 1151203971
28997 STATS LOCAL MSV -7.5786 0.71933
28998 STATS LOCAL VITERBI -7.5431 0.71933
28999 STATS LOCAL FORWARD -4.0370 0.71933
29000 HMM A C G T
29001 m->m m->i m->d i->m i->i d->m d->d
29002 COMPO 1.38732 1.33960 1.22064 1.64370
29003 1.38629 1.38629 1.38629 1.38629
29004 0.03610 4.03250 4.03250 1.46634 0.26236 0.00000 *
29005 1 0.13712 3.41716 2.82583 3.32234 1 - -
29006 1.38629 1.38629 1.38629 1.38629
29007 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29008 2 3.47557 0.12526 3.52321 2.85981 2 - -
29009 1.38629 1.38629 1.38629 1.38629
29010 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29011 3 2.97309 3.62505 0.11316 3.53363 3 - -
29012 1.38629 1.38629 1.38629 1.38629
29013 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29014 4 0.13712 3.41716 2.82583 3.32234 4 - -
29015 1.38629 1.38629 1.38629 1.38629
29016 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29017 5 2.97309 3.62505 0.11316 3.53363 5 - -
29018 1.38629 1.38629 1.38629 1.38629
29019 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29020 6 0.13712 3.41716 2.82583 3.32234 6 - -
29021 1.38629 1.38629 1.38629 1.38629
29022 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29023 7 3.47557 0.12526 3.52321 2.85981 7 - -
29024 1.38629 1.38629 1.38629 1.38629
29025 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29026 8 3.47557 0.12526 3.52321 2.85981 8 - -
29027 1.38629 1.38629 1.38629 1.38629
29028 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29029 9 3.12600 2.61890 3.17272 0.17277 9 - -
29030 1.38629 1.38629 1.38629 1.38629
29031 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29032 10 2.61030 0.48486 2.68062 1.41805 10 - -
29033 1.38629 1.38629 1.38629 1.38629
29034 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29035 11 0.13712 3.41716 2.82583 3.32234 11 - -
29036 1.38629 1.38629 1.38629 1.38629
29037 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29038 12 2.97309 3.62505 0.11316 3.53363 12 - -
29039 1.38629 1.38629 1.38629 1.38629
29040 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29041 13 2.97309 3.62505 0.11316 3.53363 13 - -
29042 1.38629 1.38629 1.38629 1.38629
29043 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29044 14 3.12600 2.61890 3.17272 0.17277 14 - -
29045 1.38629 1.38629 1.38629 1.38629
29046 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29047 15 3.47557 0.12526 3.52321 2.85981 15 - -
29048 1.38629 1.38629 1.38629 1.38629
29049 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29050 16 0.13712 3.41716 2.82583 3.32234 16 - -
29051 1.38629 1.38629 1.38629 1.38629
29052 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29053 17 2.97309 3.62505 0.11316 3.53363 17 - -
29054 1.38629 1.38629 1.38629 1.38629
29055 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29056 18 2.97309 3.62505 0.11316 3.53363 18 - -
29057 1.38629 1.38629 1.38629 1.38629
29058 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29059 19 3.47557 0.12526 3.52321 2.85981 19 - -
29060 1.38629 1.38629 1.38629 1.38629
29061 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29062 20 2.97309 3.62505 0.11316 3.53363 20 - -
29063 1.38629 1.38629 1.38629 1.38629
29064 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29065 21 2.97309 3.62505 0.11316 3.53363 21 - -
29066 1.38629 1.38629 1.38629 1.38629
29067 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29068 22 2.97309 3.62505 0.11316 3.53363 22 - -
29069 1.38629 1.38629 1.38629 1.38629
29070 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29071 23 2.97309 3.62505 0.11316 3.53363 23 - -
29072 1.38629 1.38629 1.38629 1.38629
29073 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29074 24 3.47557 0.12526 3.52321 2.85981 24 - -
29075 1.38629 1.38629 1.38629 1.38629
29076 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29077 25 3.12600 2.61890 3.17272 0.17277 25 - -
29078 1.38629 1.38629 1.38629 1.38629
29079 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29080 26 0.13712 3.41716 2.82583 3.32234 26 - -
29081 1.38629 1.38629 1.38629 1.38629
29082 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29083 27 3.47557 0.12526 3.52321 2.85981 27 - -
29084 1.38629 1.38629 1.38629 1.38629
29085 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29086 28 3.47557 0.12526 3.52321 2.85981 28 - -
29087 1.38629 1.38629 1.38629 1.38629
29088 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29089 29 3.47557 0.12526 3.52321 2.85981 29 - -
29090 1.38629 1.38629 1.38629 1.38629
29091 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29092 30 2.97309 3.62505 0.11316 3.53363 30 - -
29093 1.38629 1.38629 1.38629 1.38629
29094 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29095 31 3.47557 0.12526 3.52321 2.85981 31 - -
29096 1.38629 1.38629 1.38629 1.38629
29097 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29098 32 3.12600 2.61890 3.17272 0.17277 32 - -
29099 1.38629 1.38629 1.38629 1.38629
29100 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29101 33 2.24285 1.62386 0.52442 2.25562 33 - -
29102 1.38629 1.38629 1.38629 1.38629
29103 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29104 34 0.13712 3.41716 2.82583 3.32234 34 - -
29105 1.38629 1.38629 1.38629 1.38629
29106 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29107 35 1.94892 3.03443 0.28120 2.90791 35 - -
29108 1.38629 1.38629 1.38629 1.38629
29109 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29110 36 3.12600 2.61890 3.17272 0.17277 36 - -
29111 1.38629 1.38629 1.38629 1.38629
29112 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29113 37 3.12600 2.61890 3.17272 0.17277 37 - -
29114 1.38629 1.38629 1.38629 1.38629
29115 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29116 38 3.12600 2.61890 3.17272 0.17277 38 - -
29117 1.38629 1.38629 1.38629 1.38629
29118 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29119 39 0.13712 3.41716 2.82583 3.32234 39 - -
29120 1.38629 1.38629 1.38629 1.38629
29121 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29122 40 0.13712 3.41716 2.82583 3.32234 40 - -
29123 1.38629 1.38629 1.38629 1.38629
29124 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29125 41 2.97309 3.62505 0.11316 3.53363 41 - -
29126 1.38629 1.38629 1.38629 1.38629
29127 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29128 42 3.47557 0.12526 3.52321 2.85981 42 - -
29129 1.38629 1.38629 1.38629 1.38629
29130 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29131 43 0.13712 3.41716 2.82583 3.32234 43 - -
29132 1.38629 1.38629 1.38629 1.38629
29133 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29134 44 3.12600 2.61890 3.17272 0.17277 44 - -
29135 1.38629 1.38629 1.38629 1.38629
29136 0.03610 4.03250 4.03250 1.46634 0.26236 1.09861 0.40547
29137 45 0.13712 3.41716 2.82583 3.32234 45 - -
29138 1.38629 1.38629 1.38629 1.38629
29139 0.01821 4.01461 * 1.46634 0.26236 0.00000 *
29140 //
29141 HMMER3/b [3.0 | March 2010]
29142 NAME 4_LSU_Tracheophyta_4_LSU_start_ninep_long
29143 LENG 45
29144 ALPH DNA
29145 RF no
29146 CS no
29147 MAP yes
29148 DATE Sun Feb 19 00:13:35 2012
29149 NSEQ 610
29150 EFFN 4.007034
29151 CKSUM 1262486263
29152 STATS LOCAL MSV -7.0516 0.71933
29153 STATS LOCAL VITERBI -7.7102 0.71933
29154 STATS LOCAL FORWARD -3.8833 0.71933
29155 HMM A C G T
29156 m->m m->i m->d i->m i->i d->m d->d
29157 COMPO 1.44177 1.25215 1.23730 1.67432
29158 1.38629 1.38629 1.38629 1.38629
29159 0.03275 4.12827 4.12827 1.46634 0.26236 0.00000 *
29160 1 1.14572 1.16543 2.09655 1.39700 1 - -
29161 1.38629 1.38629 1.38629 1.38629
29162 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29163 2 1.81419 0.98237 2.18997 1.04787 2 - -
29164 1.38629 1.38629 1.38629 1.38629
29165 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29166 3 2.86297 3.69678 0.11517 3.61619 3 - -
29167 1.38629 1.38629 1.38629 1.38629
29168 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29169 4 2.98447 0.22606 2.95701 2.30470 4 - -
29170 1.38629 1.38629 1.38629 1.38629
29171 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29172 5 3.07994 3.78278 0.09787 3.70849 5 - -
29173 1.38629 1.38629 1.38629 1.38629
29174 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29175 6 0.11850 3.57637 2.92823 3.49716 6 - -
29176 1.38629 1.38629 1.38629 1.38629
29177 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29178 7 3.65723 0.10638 3.69668 2.98961 7 - -
29179 1.38629 1.38629 1.38629 1.38629
29180 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29181 8 3.65723 0.10638 3.69668 2.98961 8 - -
29182 1.38629 1.38629 1.38629 1.38629
29183 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29184 9 3.56466 0.12429 3.60782 2.78941 9 - -
29185 1.38629 1.38629 1.38629 1.38629
29186 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29187 10 3.60914 0.11551 3.65048 2.88174 10 - -
29188 1.38629 1.38629 1.38629 1.38629
29189 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29190 11 0.11850 3.57637 2.92823 3.49716 11 - -
29191 1.38629 1.38629 1.38629 1.38629
29192 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29193 12 3.07994 3.78278 0.09787 3.70849 12 - -
29194 1.38629 1.38629 1.38629 1.38629
29195 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29196 13 3.07994 3.78278 0.09787 3.70849 13 - -
29197 1.38629 1.38629 1.38629 1.38629
29198 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29199 14 3.29117 2.72365 3.33142 0.14918 14 - -
29200 1.38629 1.38629 1.38629 1.38629
29201 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29202 15 3.65723 0.10638 3.69668 2.98961 15 - -
29203 1.38629 1.38629 1.38629 1.38629
29204 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29205 16 0.11850 3.57637 2.92823 3.49716 16 - -
29206 1.38629 1.38629 1.38629 1.38629
29207 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29208 17 2.93580 3.72759 0.10886 3.64948 17 - -
29209 1.38629 1.38629 1.38629 1.38629
29210 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29211 18 2.87638 3.50440 0.14021 3.11409 18 - -
29212 1.38629 1.38629 1.38629 1.38629
29213 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29214 19 3.60880 0.11558 3.65015 2.88101 19 - -
29215 1.38629 1.38629 1.38629 1.38629
29216 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29217 20 2.86023 3.69559 0.11542 3.61490 20 - -
29218 1.38629 1.38629 1.38629 1.38629
29219 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29220 21 2.94694 3.73212 0.10794 3.65437 21 - -
29221 1.38629 1.38629 1.38629 1.38629
29222 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29223 22 3.07994 3.78278 0.09787 3.70849 22 - -
29224 1.38629 1.38629 1.38629 1.38629
29225 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29226 23 0.27754 3.04298 1.98392 2.86236 23 - -
29227 1.38629 1.38629 1.38629 1.38629
29228 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29229 24 2.22793 0.70822 2.44636 1.16116 24 - -
29230 1.38629 1.38629 1.38629 1.38629
29231 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29232 25 3.07400 2.19331 3.12394 0.22535 25 - -
29233 1.38629 1.38629 1.38629 1.38629
29234 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29235 26 0.12732 3.54052 2.82860 3.45911 26 - -
29236 1.38629 1.38629 1.38629 1.38629
29237 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29238 27 3.65723 0.10638 3.69668 2.98961 27 - -
29239 1.38629 1.38629 1.38629 1.38629
29240 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29241 28 3.60785 0.11576 3.64924 2.87898 28 - -
29242 1.38629 1.38629 1.38629 1.38629
29243 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29244 29 3.65723 0.10638 3.69668 2.98961 29 - -
29245 1.38629 1.38629 1.38629 1.38629
29246 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29247 30 2.95516 3.73544 0.10727 3.65794 30 - -
29248 1.38629 1.38629 1.38629 1.38629
29249 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29250 31 3.65723 0.10638 3.69668 2.98961 31 - -
29251 1.38629 1.38629 1.38629 1.38629
29252 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29253 32 3.25323 2.61818 3.29510 0.16093 32 - -
29254 1.38629 1.38629 1.38629 1.38629
29255 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29256 33 3.07994 3.78278 0.09787 3.70849 33 - -
29257 1.38629 1.38629 1.38629 1.38629
29258 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29259 34 0.12719 3.54105 2.83002 3.45968 34 - -
29260 1.38629 1.38629 1.38629 1.38629
29261 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29262 35 2.59329 3.49128 0.15335 3.29870 35 - -
29263 1.38629 1.38629 1.38629 1.38629
29264 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29265 36 3.24508 2.59646 3.28731 0.16353 36 - -
29266 1.38629 1.38629 1.38629 1.38629
29267 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29268 37 3.29117 2.72365 3.33142 0.14918 37 - -
29269 1.38629 1.38629 1.38629 1.38629
29270 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29271 38 3.29117 2.72365 3.33142 0.14918 38 - -
29272 1.38629 1.38629 1.38629 1.38629
29273 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29274 39 0.11850 3.57637 2.92823 3.49716 39 - -
29275 1.38629 1.38629 1.38629 1.38629
29276 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29277 40 0.11850 3.57637 2.92823 3.49716 40 - -
29278 1.38629 1.38629 1.38629 1.38629
29279 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29280 41 3.07994 3.78278 0.09787 3.70849 41 - -
29281 1.38629 1.38629 1.38629 1.38629
29282 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29283 42 3.65723 0.10638 3.69668 2.98961 42 - -
29284 1.38629 1.38629 1.38629 1.38629
29285 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29286 43 0.11850 3.57637 2.92823 3.49716 43 - -
29287 1.38629 1.38629 1.38629 1.38629
29288 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29289 44 3.29117 2.72365 3.33142 0.14918 44 - -
29290 1.38629 1.38629 1.38629 1.38629
29291 0.03275 4.12827 4.12827 1.46634 0.26236 1.09861 0.40547
29292 45 0.13605 3.29324 2.88454 3.37586 45 - -
29293 1.38629 1.38629 1.38629 1.38629
29294 0.01651 4.11203 * 1.46634 0.26236 0.00000 *
29295 //
29296 HMMER3/b [3.0 | March 2010]
29297 NAME 4_LSU_Tracheophyta_4_LSU_start_nineteen_long
29298 LENG 45
29299 ALPH DNA
29300 RF no
29301 CS no
29302 MAP yes
29303 DATE Sun Feb 19 00:20:52 2012
29304 NSEQ 29
29305 EFFN 4.053345
29306 CKSUM 688373050
29307 STATS LOCAL MSV -7.0323 0.71932
29308 STATS LOCAL VITERBI -7.6275 0.71932
29309 STATS LOCAL FORWARD -3.5999 0.71932
29310 HMM A C G T
29311 m->m m->i m->d i->m i->i d->m d->d
29312 COMPO 1.53105 1.23724 1.21047 1.63245
29313 1.38629 1.38629 1.38629 1.38629
29314 0.03251 4.13570 4.13570 1.46634 0.26236 0.00000 *
29315 1 2.03882 1.06013 2.33707 0.85145 1 - -
29316 1.38629 1.38629 1.38629 1.38629
29317 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29318 2 3.27048 0.19609 3.32492 2.26243 2 - -
29319 1.38629 1.38629 1.38629 1.38629
29320 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29321 3 3.08764 3.79422 0.09686 3.72119 3 - -
29322 1.38629 1.38629 1.38629 1.38629
29323 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29324 4 3.67051 0.10513 3.70935 2.99900 4 - -
29325 1.38629 1.38629 1.38629 1.38629
29326 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29327 5 3.08764 3.79422 0.09686 3.72119 5 - -
29328 1.38629 1.38629 1.38629 1.38629
29329 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29330 6 0.11725 3.58812 2.93578 3.51009 6 - -
29331 1.38629 1.38629 1.38629 1.38629
29332 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29333 7 3.67051 0.10513 3.70935 2.99900 7 - -
29334 1.38629 1.38629 1.38629 1.38629
29335 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29336 8 3.67051 0.10513 3.70935 2.99900 8 - -
29337 1.38629 1.38629 1.38629 1.38629
29338 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29339 9 2.58614 0.64370 2.65678 1.11117 9 - -
29340 1.38629 1.38629 1.38629 1.38629
29341 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29342 10 3.37684 0.16773 3.42749 2.43276 10 - -
29343 1.38629 1.38629 1.38629 1.38629
29344 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29345 11 0.11725 3.58812 2.93578 3.51009 11 - -
29346 1.38629 1.38629 1.38629 1.38629
29347 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29348 12 3.08764 3.79422 0.09686 3.72119 12 - -
29349 1.38629 1.38629 1.38629 1.38629
29350 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29351 13 3.08764 3.79422 0.09686 3.72119 13 - -
29352 1.38629 1.38629 1.38629 1.38629
29353 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29354 14 3.30362 2.73157 3.34338 0.14755 14 - -
29355 1.38629 1.38629 1.38629 1.38629
29356 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29357 15 3.67051 0.10513 3.70935 2.99900 15 - -
29358 1.38629 1.38629 1.38629 1.38629
29359 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29360 16 0.11725 3.58812 2.93578 3.51009 16 - -
29361 1.38629 1.38629 1.38629 1.38629
29362 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29363 17 3.08764 3.79422 0.09686 3.72119 17 - -
29364 1.38629 1.38629 1.38629 1.38629
29365 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29366 18 3.08764 3.79422 0.09686 3.72119 18 - -
29367 1.38629 1.38629 1.38629 1.38629
29368 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29369 19 3.03310 2.08635 3.08496 0.24595 19 - -
29370 1.38629 1.38629 1.38629 1.38629
29371 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29372 20 3.08764 3.79422 0.09686 3.72119 20 - -
29373 1.38629 1.38629 1.38629 1.38629
29374 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29375 21 2.08863 1.84152 0.79800 1.31923 21 - -
29376 1.38629 1.38629 1.38629 1.38629
29377 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29378 22 3.08764 3.79422 0.09686 3.72119 22 - -
29379 1.38629 1.38629 1.38629 1.38629
29380 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29381 23 3.08764 3.79422 0.09686 3.72119 23 - -
29382 1.38629 1.38629 1.38629 1.38629
29383 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29384 24 2.58614 0.64370 2.65678 1.11117 24 - -
29385 1.38629 1.38629 1.38629 1.38629
29386 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29387 25 3.24588 0.20324 3.30115 2.22429 25 - -
29388 1.38629 1.38629 1.38629 1.38629
29389 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29390 26 0.11725 3.58812 2.93578 3.51009 26 - -
29391 1.38629 1.38629 1.38629 1.38629
29392 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29393 27 3.67051 0.10513 3.70935 2.99900 27 - -
29394 1.38629 1.38629 1.38629 1.38629
29395 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29396 28 3.67051 0.10513 3.70935 2.99900 28 - -
29397 1.38629 1.38629 1.38629 1.38629
29398 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29399 29 3.03310 2.08635 3.08496 0.24595 29 - -
29400 1.38629 1.38629 1.38629 1.38629
29401 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29402 30 3.08764 3.79422 0.09686 3.72119 30 - -
29403 1.38629 1.38629 1.38629 1.38629
29404 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29405 31 3.67051 0.10513 3.70935 2.99900 31 - -
29406 1.38629 1.38629 1.38629 1.38629
29407 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29408 32 3.30362 2.73157 3.34338 0.14755 32 - -
29409 1.38629 1.38629 1.38629 1.38629
29410 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29411 33 3.08764 3.79422 0.09686 3.72119 33 - -
29412 1.38629 1.38629 1.38629 1.38629
29413 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29414 34 0.11725 3.58812 2.93578 3.51009 34 - -
29415 1.38629 1.38629 1.38629 1.38629
29416 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29417 35 3.08764 3.79422 0.09686 3.72119 35 - -
29418 1.38629 1.38629 1.38629 1.38629
29419 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29420 36 3.24588 0.20324 3.30115 2.22429 36 - -
29421 1.38629 1.38629 1.38629 1.38629
29422 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29423 37 3.30362 2.73157 3.34338 0.14755 37 - -
29424 1.38629 1.38629 1.38629 1.38629
29425 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29426 38 3.30362 2.73157 3.34338 0.14755 38 - -
29427 1.38629 1.38629 1.38629 1.38629
29428 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29429 39 0.11725 3.58812 2.93578 3.51009 39 - -
29430 1.38629 1.38629 1.38629 1.38629
29431 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29432 40 0.11725 3.58812 2.93578 3.51009 40 - -
29433 1.38629 1.38629 1.38629 1.38629
29434 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29435 41 3.08764 3.79422 0.09686 3.72119 41 - -
29436 1.38629 1.38629 1.38629 1.38629
29437 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29438 42 3.67051 0.10513 3.70935 2.99900 42 - -
29439 1.38629 1.38629 1.38629 1.38629
29440 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29441 43 0.11725 3.58812 2.93578 3.51009 43 - -
29442 1.38629 1.38629 1.38629 1.38629
29443 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29444 44 3.30362 2.73157 3.34338 0.14755 44 - -
29445 1.38629 1.38629 1.38629 1.38629
29446 0.03251 4.13570 4.13570 1.46634 0.26236 1.09861 0.40547
29447 45 0.11725 3.58812 2.93578 3.51009 45 - -
29448 1.38629 1.38629 1.38629 1.38629
29449 0.01638 4.11958 * 1.46634 0.26236 0.00000 *
29450 //
29451 HMMER3/b [3.0 | March 2010]
29452 NAME 4_LSU_Tracheophyta_4_LSU_start_one_long
29453 LENG 45
29454 ALPH DNA
29455 RF no
29456 CS no
29457 MAP yes
29458 DATE Sun Feb 19 00:10:54 2012
29459 NSEQ 6
29460 EFFN 3.225586
29461 CKSUM 92353348
29462 STATS LOCAL MSV -8.1186 0.71931
29463 STATS LOCAL VITERBI -7.6232 0.71931
29464 STATS LOCAL FORWARD -3.7345 0.71931
29465 HMM A C G T
29466 m->m m->i m->d i->m i->i d->m d->d
29467 COMPO 1.35281 1.21043 1.37640 1.65584
29468 1.38629 1.38629 1.38629 1.38629
29469 0.03756 3.99371 3.99371 1.46634 0.26236 0.00000 *
29470 1 3.05683 2.57491 3.10619 0.18389 1 - -
29471 1.38629 1.38629 1.38629 1.38629
29472 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29473 2 3.05683 2.57491 3.10619 0.18389 2 - -
29474 1.38629 1.38629 1.38629 1.38629
29475 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29476 3 2.92536 3.55560 0.12074 3.45696 3 - -
29477 1.38629 1.38629 1.38629 1.38629
29478 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29479 4 3.39667 0.13464 3.44765 2.80239 4 - -
29480 1.38629 1.38629 1.38629 1.38629
29481 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29482 5 0.30359 2.90318 1.93256 2.77723 5 - -
29483 1.38629 1.38629 1.38629 1.38629
29484 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29485 6 0.14614 3.34867 2.78135 3.24736 6 - -
29486 1.38629 1.38629 1.38629 1.38629
29487 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29488 7 3.39667 0.13464 3.44765 2.80239 7 - -
29489 1.38629 1.38629 1.38629 1.38629
29490 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29491 8 3.39667 0.13464 3.44765 2.80239 8 - -
29492 1.38629 1.38629 1.38629 1.38629
29493 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29494 9 3.39667 0.13464 3.44765 2.80239 9 - -
29495 1.38629 1.38629 1.38629 1.38629
29496 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29497 10 3.39667 0.13464 3.44765 2.80239 10 - -
29498 1.38629 1.38629 1.38629 1.38629
29499 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29500 11 0.14614 3.34867 2.78135 3.24736 11 - -
29501 1.38629 1.38629 1.38629 1.38629
29502 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29503 12 0.14614 3.34867 2.78135 3.24736 12 - -
29504 1.38629 1.38629 1.38629 1.38629
29505 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29506 13 2.92536 3.55560 0.12074 3.45696 13 - -
29507 1.38629 1.38629 1.38629 1.38629
29508 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29509 14 3.05683 2.57491 3.10619 0.18389 14 - -
29510 1.38629 1.38629 1.38629 1.38629
29511 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29512 15 3.39667 0.13464 3.44765 2.80239 15 - -
29513 1.38629 1.38629 1.38629 1.38629
29514 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29515 16 0.14614 3.34867 2.78135 3.24736 16 - -
29516 1.38629 1.38629 1.38629 1.38629
29517 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29518 17 2.92536 3.55560 0.12074 3.45696 17 - -
29519 1.38629 1.38629 1.38629 1.38629
29520 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29521 18 2.92536 3.55560 0.12074 3.45696 18 - -
29522 1.38629 1.38629 1.38629 1.38629
29523 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29524 19 3.05683 2.57491 3.10619 0.18389 19 - -
29525 1.38629 1.38629 1.38629 1.38629
29526 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29527 20 2.92536 3.55560 0.12074 3.45696 20 - -
29528 1.38629 1.38629 1.38629 1.38629
29529 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29530 21 2.92536 3.55560 0.12074 3.45696 21 - -
29531 1.38629 1.38629 1.38629 1.38629
29532 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29533 22 2.92536 3.55560 0.12074 3.45696 22 - -
29534 1.38629 1.38629 1.38629 1.38629
29535 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29536 23 0.14614 3.34867 2.78135 3.24736 23 - -
29537 1.38629 1.38629 1.38629 1.38629
29538 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29539 24 3.39667 0.13464 3.44765 2.80239 24 - -
29540 1.38629 1.38629 1.38629 1.38629
29541 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29542 25 3.05683 2.57491 3.10619 0.18389 25 - -
29543 1.38629 1.38629 1.38629 1.38629
29544 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29545 26 0.14614 3.34867 2.78135 3.24736 26 - -
29546 1.38629 1.38629 1.38629 1.38629
29547 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29548 27 3.39667 0.13464 3.44765 2.80239 27 - -
29549 1.38629 1.38629 1.38629 1.38629
29550 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29551 28 3.39667 0.13464 3.44765 2.80239 28 - -
29552 1.38629 1.38629 1.38629 1.38629
29553 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29554 29 3.39667 0.13464 3.44765 2.80239 29 - -
29555 1.38629 1.38629 1.38629 1.38629
29556 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29557 30 2.92536 3.55560 0.12074 3.45696 30 - -
29558 1.38629 1.38629 1.38629 1.38629
29559 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29560 31 3.39667 0.13464 3.44765 2.80239 31 - -
29561 1.38629 1.38629 1.38629 1.38629
29562 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29563 32 3.39667 0.13464 3.44765 2.80239 32 - -
29564 1.38629 1.38629 1.38629 1.38629
29565 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29566 33 2.92536 3.55560 0.12074 3.45696 33 - -
29567 1.38629 1.38629 1.38629 1.38629
29568 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29569 34 0.14614 3.34867 2.78135 3.24736 34 - -
29570 1.38629 1.38629 1.38629 1.38629
29571 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29572 35 2.92536 3.55560 0.12074 3.45696 35 - -
29573 1.38629 1.38629 1.38629 1.38629
29574 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29575 36 3.39667 0.13464 3.44765 2.80239 36 - -
29576 1.38629 1.38629 1.38629 1.38629
29577 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29578 37 3.05683 2.57491 3.10619 0.18389 37 - -
29579 1.38629 1.38629 1.38629 1.38629
29580 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29581 38 3.05683 2.57491 3.10619 0.18389 38 - -
29582 1.38629 1.38629 1.38629 1.38629
29583 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29584 39 0.14614 3.34867 2.78135 3.24736 39 - -
29585 1.38629 1.38629 1.38629 1.38629
29586 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29587 40 0.14614 3.34867 2.78135 3.24736 40 - -
29588 1.38629 1.38629 1.38629 1.38629
29589 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29590 41 2.92536 3.55560 0.12074 3.45696 41 - -
29591 1.38629 1.38629 1.38629 1.38629
29592 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29593 42 3.39667 0.13464 3.44765 2.80239 42 - -
29594 1.38629 1.38629 1.38629 1.38629
29595 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29596 43 0.14614 3.34867 2.78135 3.24736 43 - -
29597 1.38629 1.38629 1.38629 1.38629
29598 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29599 44 3.05683 2.57491 3.10619 0.18389 44 - -
29600 1.38629 1.38629 1.38629 1.38629
29601 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547
29602 45 0.14614 3.34867 2.78135 3.24736 45 - -
29603 1.38629 1.38629 1.38629 1.38629
29604 0.01896 3.97511 * 1.46634 0.26236 0.00000 *
29605 //
29606 HMMER3/b [3.0 | March 2010]
29607 NAME 4_LSU_Tracheophyta_4_LSU_start_seven_long
29608 LENG 45
29609 ALPH DNA
29610 RF no
29611 CS no
29612 MAP yes
29613 DATE Sun Feb 19 00:11:44 2012
29614 NSEQ 2
29615 EFFN 2.000000
29616 CKSUM 2919369856
29617 STATS LOCAL MSV -7.6061 0.72738
29618 STATS LOCAL VITERBI -8.1247 0.72738
29619 STATS LOCAL FORWARD -3.1589 0.72738
29620 HMM A C G T
29621 m->m m->i m->d i->m i->i d->m d->d
29622 COMPO 1.39994 1.35690 1.20998 1.62087
29623 1.38629 1.38629 1.38629 1.38629
29624 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
29625 1 2.53331 3.02441 0.20344 2.88069 1 - -
29626 1.38629 1.38629 1.38629 1.38629
29627 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29628 2 2.57915 2.25909 2.64442 0.28946 2 - -
29629 1.38629 1.38629 1.38629 1.38629
29630 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29631 3 2.53331 3.02441 0.20344 2.88069 3 - -
29632 1.38629 1.38629 1.38629 1.38629
29633 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29634 4 2.81865 0.23582 2.88868 2.35662 4 - -
29635 1.38629 1.38629 1.38629 1.38629
29636 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29637 5 2.53331 3.02441 0.20344 2.88069 5 - -
29638 1.38629 1.38629 1.38629 1.38629
29639 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29640 6 0.23862 2.84929 2.43386 2.70756 6 - -
29641 1.38629 1.38629 1.38629 1.38629
29642 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29643 7 2.81865 0.23582 2.88868 2.35662 7 - -
29644 1.38629 1.38629 1.38629 1.38629
29645 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29646 8 2.81865 0.23582 2.88868 2.35662 8 - -
29647 1.38629 1.38629 1.38629 1.38629
29648 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29649 9 2.81865 0.23582 2.88868 2.35662 9 - -
29650 1.38629 1.38629 1.38629 1.38629
29651 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29652 10 2.81865 0.23582 2.88868 2.35662 10 - -
29653 1.38629 1.38629 1.38629 1.38629
29654 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29655 11 0.23862 2.84929 2.43386 2.70756 11 - -
29656 1.38629 1.38629 1.38629 1.38629
29657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29658 12 2.53331 3.02441 0.20344 2.88069 12 - -
29659 1.38629 1.38629 1.38629 1.38629
29660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29661 13 2.53331 3.02441 0.20344 2.88069 13 - -
29662 1.38629 1.38629 1.38629 1.38629
29663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29664 14 2.57915 2.25909 2.64442 0.28946 14 - -
29665 1.38629 1.38629 1.38629 1.38629
29666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29667 15 2.81865 0.23582 2.88868 2.35662 15 - -
29668 1.38629 1.38629 1.38629 1.38629
29669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29670 16 0.23862 2.84929 2.43386 2.70756 16 - -
29671 1.38629 1.38629 1.38629 1.38629
29672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29673 17 2.53331 3.02441 0.20344 2.88069 17 - -
29674 1.38629 1.38629 1.38629 1.38629
29675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29676 18 2.53331 3.02441 0.20344 2.88069 18 - -
29677 1.38629 1.38629 1.38629 1.38629
29678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29679 19 2.81865 0.23582 2.88868 2.35662 19 - -
29680 1.38629 1.38629 1.38629 1.38629
29681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29682 20 2.53331 3.02441 0.20344 2.88069 20 - -
29683 1.38629 1.38629 1.38629 1.38629
29684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29685 21 0.23862 2.84929 2.43386 2.70756 21 - -
29686 1.38629 1.38629 1.38629 1.38629
29687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29688 22 2.53331 3.02441 0.20344 2.88069 22 - -
29689 1.38629 1.38629 1.38629 1.38629
29690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29691 23 0.23862 2.84929 2.43386 2.70756 23 - -
29692 1.38629 1.38629 1.38629 1.38629
29693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29694 24 2.53331 3.02441 0.20344 2.88069 24 - -
29695 1.38629 1.38629 1.38629 1.38629
29696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29697 25 2.57915 2.25909 2.64442 0.28946 25 - -
29698 1.38629 1.38629 1.38629 1.38629
29699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29700 26 0.23862 2.84929 2.43386 2.70756 26 - -
29701 1.38629 1.38629 1.38629 1.38629
29702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29703 27 2.81865 0.23582 2.88868 2.35662 27 - -
29704 1.38629 1.38629 1.38629 1.38629
29705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29706 28 2.81865 0.23582 2.88868 2.35662 28 - -
29707 1.38629 1.38629 1.38629 1.38629
29708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29709 29 2.81865 0.23582 2.88868 2.35662 29 - -
29710 1.38629 1.38629 1.38629 1.38629
29711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29712 30 2.53331 3.02441 0.20344 2.88069 30 - -
29713 1.38629 1.38629 1.38629 1.38629
29714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29715 31 2.81865 0.23582 2.88868 2.35662 31 - -
29716 1.38629 1.38629 1.38629 1.38629
29717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29718 32 2.57915 2.25909 2.64442 0.28946 32 - -
29719 1.38629 1.38629 1.38629 1.38629
29720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29721 33 2.53331 3.02441 0.20344 2.88069 33 - -
29722 1.38629 1.38629 1.38629 1.38629
29723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29724 34 0.23862 2.84929 2.43386 2.70756 34 - -
29725 1.38629 1.38629 1.38629 1.38629
29726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29727 35 2.53331 3.02441 0.20344 2.88069 35 - -
29728 1.38629 1.38629 1.38629 1.38629
29729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29730 36 2.57915 2.25909 2.64442 0.28946 36 - -
29731 1.38629 1.38629 1.38629 1.38629
29732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29733 37 2.57915 2.25909 2.64442 0.28946 37 - -
29734 1.38629 1.38629 1.38629 1.38629
29735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29736 38 2.57915 2.25909 2.64442 0.28946 38 - -
29737 1.38629 1.38629 1.38629 1.38629
29738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29739 39 0.23862 2.84929 2.43386 2.70756 39 - -
29740 1.38629 1.38629 1.38629 1.38629
29741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29742 40 0.23862 2.84929 2.43386 2.70756 40 - -
29743 1.38629 1.38629 1.38629 1.38629
29744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29745 41 2.53331 3.02441 0.20344 2.88069 41 - -
29746 1.38629 1.38629 1.38629 1.38629
29747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29748 42 2.81865 0.23582 2.88868 2.35662 42 - -
29749 1.38629 1.38629 1.38629 1.38629
29750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29751 43 0.23862 2.84929 2.43386 2.70756 43 - -
29752 1.38629 1.38629 1.38629 1.38629
29753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29754 44 2.57915 2.25909 2.64442 0.28946 44 - -
29755 1.38629 1.38629 1.38629 1.38629
29756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
29757 45 0.23862 2.84929 2.43386 2.70756 45 - -
29758 1.38629 1.38629 1.38629 1.38629
29759 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
29760 //
29761 HMMER3/b [3.0 | March 2010]
29762 NAME 4_LSU_Tracheophyta_4_LSU_start_seventeen_long
29763 LENG 45
29764 ALPH DNA
29765 RF no
29766 CS no
29767 MAP yes
29768 DATE Sun Feb 19 00:20:31 2012
29769 NSEQ 315
29770 EFFN 3.917313
29771 CKSUM 3308305825
29772 STATS LOCAL MSV -6.8187 0.71931
29773 STATS LOCAL VITERBI -7.7150 0.71931
29774 STATS LOCAL FORWARD -3.9240 0.71931
29775 HMM A C G T
29776 m->m m->i m->d i->m i->i d->m d->d
29777 COMPO 1.48096 1.28928 1.21174 1.61229
29778 1.38629 1.38629 1.38629 1.38629
29779 0.03324 4.11371 4.11371 1.46634 0.26236 0.00000 *
29780 1 1.70907 1.22019 1.38354 1.29791 1 - -
29781 1.38629 1.38629 1.38629 1.38629
29782 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29783 2 2.55787 1.37120 2.56594 0.52445 2 - -
29784 1.38629 1.38629 1.38629 1.38629
29785 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29786 3 3.06461 3.76005 0.09993 3.68324 3 - -
29787 1.38629 1.38629 1.38629 1.38629
29788 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29789 4 3.09656 0.15677 3.38125 2.71979 4 - -
29790 1.38629 1.38629 1.38629 1.38629
29791 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29792 5 3.06461 3.76005 0.09993 3.68324 5 - -
29793 1.38629 1.38629 1.38629 1.38629
29794 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29795 6 0.12104 3.55308 2.91328 3.47156 6 - -
29796 1.38629 1.38629 1.38629 1.38629
29797 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29798 7 2.74203 0.43166 2.81020 1.48749 7 - -
29799 1.38629 1.38629 1.38629 1.38629
29800 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29801 8 3.63085 0.10891 3.67153 2.97093 8 - -
29802 1.38629 1.38629 1.38629 1.38629
29803 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29804 9 3.52194 0.13035 3.56685 2.74224 9 - -
29805 1.38629 1.38629 1.38629 1.38629
29806 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29807 10 3.63085 0.10891 3.67153 2.97093 10 - -
29808 1.38629 1.38629 1.38629 1.38629
29809 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29810 11 0.12104 3.55308 2.91328 3.47156 11 - -
29811 1.38629 1.38629 1.38629 1.38629
29812 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29813 12 3.06461 3.76005 0.09993 3.68324 12 - -
29814 1.38629 1.38629 1.38629 1.38629
29815 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29816 13 3.06461 3.76005 0.09993 3.68324 13 - -
29817 1.38629 1.38629 1.38629 1.38629
29818 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29819 14 3.26661 2.70806 3.30783 0.15245 14 - -
29820 1.38629 1.38629 1.38629 1.38629
29821 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29822 15 3.63085 0.10891 3.67153 2.97093 15 - -
29823 1.38629 1.38629 1.38629 1.38629
29824 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29825 16 0.12104 3.55308 2.91328 3.47156 16 - -
29826 1.38629 1.38629 1.38629 1.38629
29827 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29828 17 3.06461 3.76005 0.09993 3.68324 17 - -
29829 1.38629 1.38629 1.38629 1.38629
29830 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29831 18 3.06461 3.76005 0.09993 3.68324 18 - -
29832 1.38629 1.38629 1.38629 1.38629
29833 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29834 19 3.63085 0.10891 3.67153 2.97093 19 - -
29835 1.38629 1.38629 1.38629 1.38629
29836 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29837 20 3.06461 3.76005 0.09993 3.68324 20 - -
29838 1.38629 1.38629 1.38629 1.38629
29839 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29840 21 3.06461 3.76005 0.09993 3.68324 21 - -
29841 1.38629 1.38629 1.38629 1.38629
29842 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29843 22 3.06461 3.76005 0.09993 3.68324 22 - -
29844 1.38629 1.38629 1.38629 1.38629
29845 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29846 23 0.53592 2.70900 1.30245 2.57174 23 - -
29847 1.38629 1.38629 1.38629 1.38629
29848 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29849 24 2.44202 0.99805 2.46142 0.77848 24 - -
29850 1.38629 1.38629 1.38629 1.38629
29851 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29852 25 2.98828 2.53537 3.16297 0.18863 25 - -
29853 1.38629 1.38629 1.38629 1.38629
29854 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29855 26 0.12104 3.55308 2.91328 3.47156 26 - -
29856 1.38629 1.38629 1.38629 1.38629
29857 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29858 27 3.63085 0.10891 3.67153 2.97093 27 - -
29859 1.38629 1.38629 1.38629 1.38629
29860 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29861 28 3.63085 0.10891 3.67153 2.97093 28 - -
29862 1.38629 1.38629 1.38629 1.38629
29863 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29864 29 3.63085 0.10891 3.67153 2.97093 29 - -
29865 1.38629 1.38629 1.38629 1.38629
29866 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29867 30 3.06461 3.76005 0.09993 3.68324 30 - -
29868 1.38629 1.38629 1.38629 1.38629
29869 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29870 31 3.63085 0.10891 3.67153 2.97093 31 - -
29871 1.38629 1.38629 1.38629 1.38629
29872 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29873 32 3.26661 2.70806 3.30783 0.15245 32 - -
29874 1.38629 1.38629 1.38629 1.38629
29875 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29876 33 3.06461 3.76005 0.09993 3.68324 33 - -
29877 1.38629 1.38629 1.38629 1.38629
29878 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29879 34 0.12104 3.55308 2.91328 3.47156 34 - -
29880 1.38629 1.38629 1.38629 1.38629
29881 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29882 35 3.06461 3.76005 0.09993 3.68324 35 - -
29883 1.38629 1.38629 1.38629 1.38629
29884 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29885 36 3.26661 2.70806 3.30783 0.15245 36 - -
29886 1.38629 1.38629 1.38629 1.38629
29887 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29888 37 3.26661 2.70806 3.30783 0.15245 37 - -
29889 1.38629 1.38629 1.38629 1.38629
29890 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29891 38 3.26661 2.70806 3.30783 0.15245 38 - -
29892 1.38629 1.38629 1.38629 1.38629
29893 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29894 39 0.12104 3.55308 2.91328 3.47156 39 - -
29895 1.38629 1.38629 1.38629 1.38629
29896 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29897 40 0.12104 3.55308 2.91328 3.47156 40 - -
29898 1.38629 1.38629 1.38629 1.38629
29899 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29900 41 3.06461 3.76005 0.09993 3.68324 41 - -
29901 1.38629 1.38629 1.38629 1.38629
29902 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29903 42 3.63085 0.10891 3.67153 2.97093 42 - -
29904 1.38629 1.38629 1.38629 1.38629
29905 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29906 43 0.12104 3.55308 2.91328 3.47156 43 - -
29907 1.38629 1.38629 1.38629 1.38629
29908 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29909 44 3.26661 2.70806 3.30783 0.15245 44 - -
29910 1.38629 1.38629 1.38629 1.38629
29911 0.03324 4.11371 4.11371 1.46634 0.26236 1.09861 0.40547
29912 45 0.12104 3.55308 2.91328 3.47156 45 - -
29913 1.38629 1.38629 1.38629 1.38629
29914 0.01676 4.09722 * 1.46634 0.26236 0.00000 *
29915 //
29916 HMMER3/b [3.0 | March 2010]
29917 NAME 4_LSU_Tracheophyta_4_LSU_start_six_long
29918 LENG 45
29919 ALPH DNA
29920 RF no
29921 CS no
29922 MAP yes
29923 DATE Sun Feb 19 00:11:36 2012
29924 NSEQ 16
29925 EFFN 3.230469
29926 CKSUM 3506547780
29927 STATS LOCAL MSV -8.2747 0.71931
29928 STATS LOCAL VITERBI -7.5578 0.71931
29929 STATS LOCAL FORWARD -3.9985 0.71931
29930 HMM A C G T
29931 m->m m->i m->d i->m i->i d->m d->d
29932 COMPO 1.39108 1.33292 1.20881 1.66636
29933 1.38629 1.38629 1.38629 1.38629
29934 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
29935 1 0.14592 3.35028 2.78241 3.24912 1 - -
29936 1.38629 1.38629 1.38629 1.38629
29937 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29938 2 3.39853 0.13441 3.44944 2.80375 2 - -
29939 1.38629 1.38629 1.38629 1.38629
29940 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29941 3 2.92650 3.55724 0.12055 3.45877 3 - -
29942 1.38629 1.38629 1.38629 1.38629
29943 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29944 4 0.14592 3.35028 2.78241 3.24912 4 - -
29945 1.38629 1.38629 1.38629 1.38629
29946 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29947 5 2.92650 3.55724 0.12055 3.45877 5 - -
29948 1.38629 1.38629 1.38629 1.38629
29949 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29950 6 0.14592 3.35028 2.78241 3.24912 6 - -
29951 1.38629 1.38629 1.38629 1.38629
29952 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29953 7 3.39853 0.13441 3.44944 2.80375 7 - -
29954 1.38629 1.38629 1.38629 1.38629
29955 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29956 8 3.39853 0.13441 3.44944 2.80375 8 - -
29957 1.38629 1.38629 1.38629 1.38629
29958 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29959 9 3.05845 2.57594 3.10775 0.18362 9 - -
29960 1.38629 1.38629 1.38629 1.38629
29961 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29962 10 3.39853 0.13441 3.44944 2.80375 10 - -
29963 1.38629 1.38629 1.38629 1.38629
29964 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29965 11 0.14592 3.35028 2.78241 3.24912 11 - -
29966 1.38629 1.38629 1.38629 1.38629
29967 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29968 12 2.92650 3.55724 0.12055 3.45877 12 - -
29969 1.38629 1.38629 1.38629 1.38629
29970 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29971 13 2.92650 3.55724 0.12055 3.45877 13 - -
29972 1.38629 1.38629 1.38629 1.38629
29973 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29974 14 3.05845 2.57594 3.10775 0.18362 14 - -
29975 1.38629 1.38629 1.38629 1.38629
29976 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29977 15 3.39853 0.13441 3.44944 2.80375 15 - -
29978 1.38629 1.38629 1.38629 1.38629
29979 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29980 16 0.14592 3.35028 2.78241 3.24912 16 - -
29981 1.38629 1.38629 1.38629 1.38629
29982 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29983 17 2.92650 3.55724 0.12055 3.45877 17 - -
29984 1.38629 1.38629 1.38629 1.38629
29985 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29986 18 2.92650 3.55724 0.12055 3.45877 18 - -
29987 1.38629 1.38629 1.38629 1.38629
29988 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29989 19 3.39853 0.13441 3.44944 2.80375 19 - -
29990 1.38629 1.38629 1.38629 1.38629
29991 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29992 20 2.92650 3.55724 0.12055 3.45877 20 - -
29993 1.38629 1.38629 1.38629 1.38629
29994 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29995 21 2.92650 3.55724 0.12055 3.45877 21 - -
29996 1.38629 1.38629 1.38629 1.38629
29997 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
29998 22 2.92650 3.55724 0.12055 3.45877 22 - -
29999 1.38629 1.38629 1.38629 1.38629
30000 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30001 23 2.92650 3.55724 0.12055 3.45877 23 - -
30002 1.38629 1.38629 1.38629 1.38629
30003 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30004 24 3.39853 0.13441 3.44944 2.80375 24 - -
30005 1.38629 1.38629 1.38629 1.38629
30006 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30007 25 3.05845 2.57594 3.10775 0.18362 25 - -
30008 1.38629 1.38629 1.38629 1.38629
30009 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30010 26 0.14592 3.35028 2.78241 3.24912 26 - -
30011 1.38629 1.38629 1.38629 1.38629
30012 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30013 27 3.39853 0.13441 3.44944 2.80375 27 - -
30014 1.38629 1.38629 1.38629 1.38629
30015 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30016 28 3.39853 0.13441 3.44944 2.80375 28 - -
30017 1.38629 1.38629 1.38629 1.38629
30018 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30019 29 3.39853 0.13441 3.44944 2.80375 29 - -
30020 1.38629 1.38629 1.38629 1.38629
30021 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30022 30 2.92650 3.55724 0.12055 3.45877 30 - -
30023 1.38629 1.38629 1.38629 1.38629
30024 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30025 31 3.39853 0.13441 3.44944 2.80375 31 - -
30026 1.38629 1.38629 1.38629 1.38629
30027 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30028 32 3.05845 2.57594 3.10775 0.18362 32 - -
30029 1.38629 1.38629 1.38629 1.38629
30030 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30031 33 2.92650 3.55724 0.12055 3.45877 33 - -
30032 1.38629 1.38629 1.38629 1.38629
30033 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30034 34 0.14592 3.35028 2.78241 3.24912 34 - -
30035 1.38629 1.38629 1.38629 1.38629
30036 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30037 35 1.65135 2.79903 0.38930 2.66201 35 - -
30038 1.38629 1.38629 1.38629 1.38629
30039 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30040 36 3.05845 2.57594 3.10775 0.18362 36 - -
30041 1.38629 1.38629 1.38629 1.38629
30042 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30043 37 3.05845 2.57594 3.10775 0.18362 37 - -
30044 1.38629 1.38629 1.38629 1.38629
30045 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30046 38 3.05845 2.57594 3.10775 0.18362 38 - -
30047 1.38629 1.38629 1.38629 1.38629
30048 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30049 39 0.14592 3.35028 2.78241 3.24912 39 - -
30050 1.38629 1.38629 1.38629 1.38629
30051 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30052 40 0.14592 3.35028 2.78241 3.24912 40 - -
30053 1.38629 1.38629 1.38629 1.38629
30054 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30055 41 2.92650 3.55724 0.12055 3.45877 41 - -
30056 1.38629 1.38629 1.38629 1.38629
30057 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30058 42 3.39853 0.13441 3.44944 2.80375 42 - -
30059 1.38629 1.38629 1.38629 1.38629
30060 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30061 43 0.14592 3.35028 2.78241 3.24912 43 - -
30062 1.38629 1.38629 1.38629 1.38629
30063 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30064 44 3.05845 2.57594 3.10775 0.18362 44 - -
30065 1.38629 1.38629 1.38629 1.38629
30066 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
30067 45 0.14592 3.35028 2.78241 3.24912 45 - -
30068 1.38629 1.38629 1.38629 1.38629
30069 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
30070 //
30071 HMMER3/b [3.0 | March 2010]
30072 NAME 4_LSU_Tracheophyta_4_LSU_start_sixteena_long
30073 LENG 45
30074 ALPH DNA
30075 RF no
30076 CS no
30077 MAP yes
30078 DATE Sun Feb 19 00:16:12 2012
30079 NSEQ 44
30080 EFFN 3.585205
30081 CKSUM 645047424
30082 STATS LOCAL MSV -7.5020 0.71933
30083 STATS LOCAL VITERBI -7.7177 0.71933
30084 STATS LOCAL FORWARD -3.8505 0.71933
30085 HMM A C G T
30086 m->m m->i m->d i->m i->i d->m d->d
30087 COMPO 1.44682 1.21642 1.26677 1.67850
30088 1.38629 1.38629 1.38629 1.38629
30089 0.03518 4.05789 4.05789 1.46634 0.26236 0.00000 *
30090 1 2.01891 0.44736 2.35801 2.01530 1 - -
30091 1.38629 1.38629 1.38629 1.38629
30092 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30093 2 3.40225 0.14546 3.45187 2.65373 2 - -
30094 1.38629 1.38629 1.38629 1.38629
30095 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30096 3 3.00287 3.66877 0.10867 3.58200 3 - -
30097 1.38629 1.38629 1.38629 1.38629
30098 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30099 4 2.75860 0.19212 3.16597 2.67018 4 - -
30100 1.38629 1.38629 1.38629 1.38629
30101 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30102 5 3.00287 3.66877 0.10867 3.58200 5 - -
30103 1.38629 1.38629 1.38629 1.38629
30104 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30105 6 0.13171 3.46074 2.85396 3.37014 6 - -
30106 1.38629 1.38629 1.38629 1.38629
30107 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30108 7 3.52559 0.11970 3.57103 2.89585 7 - -
30109 1.38629 1.38629 1.38629 1.38629
30110 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30111 8 3.52559 0.11970 3.57103 2.89585 8 - -
30112 1.38629 1.38629 1.38629 1.38629
30113 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30114 9 2.79989 0.18650 3.19116 2.68533 9 - -
30115 1.38629 1.38629 1.38629 1.38629
30116 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30117 10 3.52559 0.11970 3.57103 2.89585 10 - -
30118 1.38629 1.38629 1.38629 1.38629
30119 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30120 11 0.13171 3.46074 2.85396 3.37014 11 - -
30121 1.38629 1.38629 1.38629 1.38629
30122 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30123 12 3.00287 3.66877 0.10867 3.58200 12 - -
30124 1.38629 1.38629 1.38629 1.38629
30125 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30126 13 3.00287 3.66877 0.10867 3.58200 13 - -
30127 1.38629 1.38629 1.38629 1.38629
30128 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30129 14 3.17060 2.64719 3.21559 0.16601 14 - -
30130 1.38629 1.38629 1.38629 1.38629
30131 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30132 15 3.52559 0.11970 3.57103 2.89585 15 - -
30133 1.38629 1.38629 1.38629 1.38629
30134 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30135 16 0.13171 3.46074 2.85396 3.37014 16 - -
30136 1.38629 1.38629 1.38629 1.38629
30137 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30138 17 3.00287 3.66877 0.10867 3.58200 17 - -
30139 1.38629 1.38629 1.38629 1.38629
30140 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30141 18 1.51507 2.79099 0.43315 2.65382 18 - -
30142 1.38629 1.38629 1.38629 1.38629
30143 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30144 19 3.52559 0.11970 3.57103 2.89585 19 - -
30145 1.38629 1.38629 1.38629 1.38629
30146 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30147 20 3.00287 3.66877 0.10867 3.58200 20 - -
30148 1.38629 1.38629 1.38629 1.38629
30149 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30150 21 3.00287 3.66877 0.10867 3.58200 21 - -
30151 1.38629 1.38629 1.38629 1.38629
30152 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30153 22 3.00287 3.66877 0.10867 3.58200 22 - -
30154 1.38629 1.38629 1.38629 1.38629
30155 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30156 23 0.15890 3.35672 2.60794 3.26017 23 - -
30157 1.38629 1.38629 1.38629 1.38629
30158 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30159 24 2.57661 1.39705 2.64361 0.50164 24 - -
30160 1.38629 1.38629 1.38629 1.38629
30161 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30162 25 3.17060 2.64719 3.21559 0.16601 25 - -
30163 1.38629 1.38629 1.38629 1.38629
30164 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30165 26 0.13171 3.46074 2.85396 3.37014 26 - -
30166 1.38629 1.38629 1.38629 1.38629
30167 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30168 27 3.52559 0.11970 3.57103 2.89585 27 - -
30169 1.38629 1.38629 1.38629 1.38629
30170 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30171 28 3.52559 0.11970 3.57103 2.89585 28 - -
30172 1.38629 1.38629 1.38629 1.38629
30173 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30174 29 3.52559 0.11970 3.57103 2.89585 29 - -
30175 1.38629 1.38629 1.38629 1.38629
30176 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30177 30 3.00287 3.66877 0.10867 3.58200 30 - -
30178 1.38629 1.38629 1.38629 1.38629
30179 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30180 31 3.52559 0.11970 3.57103 2.89585 31 - -
30181 1.38629 1.38629 1.38629 1.38629
30182 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30183 32 3.17060 2.64719 3.21559 0.16601 32 - -
30184 1.38629 1.38629 1.38629 1.38629
30185 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30186 33 3.00287 3.66877 0.10867 3.58200 33 - -
30187 1.38629 1.38629 1.38629 1.38629
30188 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30189 34 0.13171 3.46074 2.85396 3.37014 34 - -
30190 1.38629 1.38629 1.38629 1.38629
30191 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30192 35 2.43762 3.38266 0.17325 3.27685 35 - -
30193 1.38629 1.38629 1.38629 1.38629
30194 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30195 36 3.17060 2.64719 3.21559 0.16601 36 - -
30196 1.38629 1.38629 1.38629 1.38629
30197 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30198 37 3.17060 2.64719 3.21559 0.16601 37 - -
30199 1.38629 1.38629 1.38629 1.38629
30200 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30201 38 3.17060 2.64719 3.21559 0.16601 38 - -
30202 1.38629 1.38629 1.38629 1.38629
30203 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30204 39 0.13171 3.46074 2.85396 3.37014 39 - -
30205 1.38629 1.38629 1.38629 1.38629
30206 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30207 40 0.13171 3.46074 2.85396 3.37014 40 - -
30208 1.38629 1.38629 1.38629 1.38629
30209 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30210 41 3.00287 3.66877 0.10867 3.58200 41 - -
30211 1.38629 1.38629 1.38629 1.38629
30212 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30213 42 3.52559 0.11970 3.57103 2.89585 42 - -
30214 1.38629 1.38629 1.38629 1.38629
30215 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30216 43 0.13171 3.46074 2.85396 3.37014 43 - -
30217 1.38629 1.38629 1.38629 1.38629
30218 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30219 44 3.17060 2.64719 3.21559 0.16601 44 - -
30220 1.38629 1.38629 1.38629 1.38629
30221 0.03518 4.05789 4.05789 1.46634 0.26236 1.09861 0.40547
30222 45 0.13171 3.46074 2.85396 3.37014 45 - -
30223 1.38629 1.38629 1.38629 1.38629
30224 0.01775 4.04045 * 1.46634 0.26236 0.00000 *
30225 //
30226 HMMER3/b [3.0 | March 2010]
30227 NAME 4_LSU_Tracheophyta_4_LSU_start_sixteenb_long
30228 LENG 45
30229 ALPH DNA
30230 RF no
30231 CS no
30232 MAP yes
30233 DATE Sun Feb 19 00:16:20 2012
30234 NSEQ 18
30235 EFFN 3.238770
30236 CKSUM 1315903361
30237 STATS LOCAL MSV -8.3026 0.71933
30238 STATS LOCAL VITERBI -7.5704 0.71933
30239 STATS LOCAL FORWARD -4.0875 0.71933
30240 HMM A C G T
30241 m->m m->i m->d i->m i->i d->m d->d
30242 COMPO 1.47286 1.23053 1.25337 1.64479
30243 1.38629 1.38629 1.38629 1.38629
30244 0.03747 3.99614 3.99614 1.46634 0.26236 0.00000 *
30245 1 0.14555 3.35302 2.78419 3.25212 1 - -
30246 1.38629 1.38629 1.38629 1.38629
30247 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30248 2 2.56199 0.50253 2.63307 1.40246 2 - -
30249 1.38629 1.38629 1.38629 1.38629
30250 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30251 3 2.92843 3.56004 0.12024 3.46185 3 - -
30252 1.38629 1.38629 1.38629 1.38629
30253 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30254 4 3.40169 0.13402 3.45247 2.80607 4 - -
30255 1.38629 1.38629 1.38629 1.38629
30256 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30257 5 2.92843 3.56004 0.12024 3.46185 5 - -
30258 1.38629 1.38629 1.38629 1.38629
30259 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30260 6 0.14555 3.35302 2.78419 3.25212 6 - -
30261 1.38629 1.38629 1.38629 1.38629
30262 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30263 7 3.40169 0.13402 3.45247 2.80607 7 - -
30264 1.38629 1.38629 1.38629 1.38629
30265 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30266 8 3.40169 0.13402 3.45247 2.80607 8 - -
30267 1.38629 1.38629 1.38629 1.38629
30268 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30269 9 3.06119 2.57769 3.11039 0.18316 9 - -
30270 1.38629 1.38629 1.38629 1.38629
30271 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30272 10 3.40169 0.13402 3.45247 2.80607 10 - -
30273 1.38629 1.38629 1.38629 1.38629
30274 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30275 11 0.14555 3.35302 2.78419 3.25212 11 - -
30276 1.38629 1.38629 1.38629 1.38629
30277 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30278 12 2.92843 3.56004 0.12024 3.46185 12 - -
30279 1.38629 1.38629 1.38629 1.38629
30280 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30281 13 3.40169 0.13402 3.45247 2.80607 13 - -
30282 1.38629 1.38629 1.38629 1.38629
30283 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30284 14 3.06119 2.57769 3.11039 0.18316 14 - -
30285 1.38629 1.38629 1.38629 1.38629
30286 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30287 15 3.40169 0.13402 3.45247 2.80607 15 - -
30288 1.38629 1.38629 1.38629 1.38629
30289 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30290 16 0.14555 3.35302 2.78419 3.25212 16 - -
30291 1.38629 1.38629 1.38629 1.38629
30292 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30293 17 2.92843 3.56004 0.12024 3.46185 17 - -
30294 1.38629 1.38629 1.38629 1.38629
30295 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30296 18 2.92843 3.56004 0.12024 3.46185 18 - -
30297 1.38629 1.38629 1.38629 1.38629
30298 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30299 19 3.40169 0.13402 3.45247 2.80607 19 - -
30300 1.38629 1.38629 1.38629 1.38629
30301 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30302 20 2.92843 3.56004 0.12024 3.46185 20 - -
30303 1.38629 1.38629 1.38629 1.38629
30304 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30305 21 2.92843 3.56004 0.12024 3.46185 21 - -
30306 1.38629 1.38629 1.38629 1.38629
30307 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30308 22 2.92843 3.56004 0.12024 3.46185 22 - -
30309 1.38629 1.38629 1.38629 1.38629
30310 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30311 23 2.92843 3.56004 0.12024 3.46185 23 - -
30312 1.38629 1.38629 1.38629 1.38629
30313 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30314 24 3.40169 0.13402 3.45247 2.80607 24 - -
30315 1.38629 1.38629 1.38629 1.38629
30316 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30317 25 3.06119 2.57769 3.11039 0.18316 25 - -
30318 1.38629 1.38629 1.38629 1.38629
30319 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30320 26 0.14555 3.35302 2.78419 3.25212 26 - -
30321 1.38629 1.38629 1.38629 1.38629
30322 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30323 27 3.40169 0.13402 3.45247 2.80607 27 - -
30324 1.38629 1.38629 1.38629 1.38629
30325 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30326 28 3.40169 0.13402 3.45247 2.80607 28 - -
30327 1.38629 1.38629 1.38629 1.38629
30328 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30329 29 3.40169 0.13402 3.45247 2.80607 29 - -
30330 1.38629 1.38629 1.38629 1.38629
30331 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30332 30 2.92843 3.56004 0.12024 3.46185 30 - -
30333 1.38629 1.38629 1.38629 1.38629
30334 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30335 31 3.40169 0.13402 3.45247 2.80607 31 - -
30336 1.38629 1.38629 1.38629 1.38629
30337 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30338 32 3.06119 2.57769 3.11039 0.18316 32 - -
30339 1.38629 1.38629 1.38629 1.38629
30340 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30341 33 2.92843 3.56004 0.12024 3.46185 33 - -
30342 1.38629 1.38629 1.38629 1.38629
30343 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30344 34 0.14555 3.35302 2.78419 3.25212 34 - -
30345 1.38629 1.38629 1.38629 1.38629
30346 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30347 35 2.92843 3.56004 0.12024 3.46185 35 - -
30348 1.38629 1.38629 1.38629 1.38629
30349 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30350 36 3.06119 2.57769 3.11039 0.18316 36 - -
30351 1.38629 1.38629 1.38629 1.38629
30352 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30353 37 3.06119 2.57769 3.11039 0.18316 37 - -
30354 1.38629 1.38629 1.38629 1.38629
30355 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30356 38 3.06119 2.57769 3.11039 0.18316 38 - -
30357 1.38629 1.38629 1.38629 1.38629
30358 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30359 39 0.14555 3.35302 2.78419 3.25212 39 - -
30360 1.38629 1.38629 1.38629 1.38629
30361 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30362 40 0.14555 3.35302 2.78419 3.25212 40 - -
30363 1.38629 1.38629 1.38629 1.38629
30364 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30365 41 2.92843 3.56004 0.12024 3.46185 41 - -
30366 1.38629 1.38629 1.38629 1.38629
30367 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30368 42 3.40169 0.13402 3.45247 2.80607 42 - -
30369 1.38629 1.38629 1.38629 1.38629
30370 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30371 43 0.14555 3.35302 2.78419 3.25212 43 - -
30372 1.38629 1.38629 1.38629 1.38629
30373 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30374 44 3.06119 2.57769 3.11039 0.18316 44 - -
30375 1.38629 1.38629 1.38629 1.38629
30376 0.03747 3.99614 3.99614 1.46634 0.26236 1.09861 0.40547
30377 45 0.14555 3.35302 2.78419 3.25212 45 - -
30378 1.38629 1.38629 1.38629 1.38629
30379 0.01891 3.97758 * 1.46634 0.26236 0.00000 *
30380 //
30381 HMMER3/b [3.0 | March 2010]
30382 NAME 4_LSU_Tracheophyta_4_LSU_start_sixteenc_long
30383 LENG 45
30384 ALPH DNA
30385 RF no
30386 CS no
30387 MAP yes
30388 DATE Sun Feb 19 00:16:25 2012
30389 NSEQ 77
30390 EFFN 3.689270
30391 CKSUM 597093898
30392 STATS LOCAL MSV -7.5676 0.71931
30393 STATS LOCAL VITERBI -7.7877 0.71931
30394 STATS LOCAL FORWARD -3.9275 0.71931
30395 HMM A C G T
30396 m->m m->i m->d i->m i->i d->m d->d
30397 COMPO 1.51890 1.43798 1.04634 1.64808
30398 1.38629 1.38629 1.38629 1.38629
30399 0.03455 4.07572 4.07572 1.46634 0.26236 0.00000 *
30400 1 2.40425 3.08130 0.22999 2.67035 1 - -
30401 1.38629 1.38629 1.38629 1.38629
30402 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30403 2 3.01817 2.22960 3.06947 0.22679 2 - -
30404 1.38629 1.38629 1.38629 1.38629
30405 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30406 3 2.61265 3.50636 0.14664 3.40965 3 - -
30407 1.38629 1.38629 1.38629 1.38629
30408 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30409 4 2.00072 0.72874 2.10141 1.34721 4 - -
30410 1.38629 1.38629 1.38629 1.38629
30411 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30412 5 2.31739 3.33257 0.19122 3.22347 5 - -
30413 1.38629 1.38629 1.38629 1.38629
30414 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30415 6 0.12813 3.49076 2.87327 3.40309 6 - -
30416 1.38629 1.38629 1.38629 1.38629
30417 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30418 7 3.45939 0.13642 3.50685 2.71682 7 - -
30419 1.38629 1.38629 1.38629 1.38629
30420 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30421 8 3.55992 0.11605 3.60383 2.92044 8 - -
30422 1.38629 1.38629 1.38629 1.38629
30423 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30424 9 3.30137 0.17320 3.35448 2.43877 9 - -
30425 1.38629 1.38629 1.38629 1.38629
30426 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30427 10 3.38645 0.15256 3.43656 2.58377 10 - -
30428 1.38629 1.38629 1.38629 1.38629
30429 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30430 11 0.12813 3.49076 2.87327 3.40309 11 - -
30431 1.38629 1.38629 1.38629 1.38629
30432 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30433 12 3.02313 3.69864 0.10572 3.61510 12 - -
30434 1.38629 1.38629 1.38629 1.38629
30435 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30436 13 3.02313 3.69864 0.10572 3.61510 13 - -
30437 1.38629 1.38629 1.38629 1.38629
30438 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30439 14 0.15781 3.32082 2.80161 3.01275 14 - -
30440 1.38629 1.38629 1.38629 1.38629
30441 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30442 15 3.20158 2.66683 3.24536 0.16149 15 - -
30443 1.38629 1.38629 1.38629 1.38629
30444 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30445 16 3.02313 3.69864 0.10572 3.61510 16 - -
30446 1.38629 1.38629 1.38629 1.38629
30447 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30448 17 3.02313 3.69864 0.10572 3.61510 17 - -
30449 1.38629 1.38629 1.38629 1.38629
30450 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30451 18 2.94893 3.54129 0.12822 3.24501 18 - -
30452 1.38629 1.38629 1.38629 1.38629
30453 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30454 19 3.33426 0.16497 3.38622 2.49375 19 - -
30455 1.38629 1.38629 1.38629 1.38629
30456 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30457 20 3.02313 3.69864 0.10572 3.61510 20 - -
30458 1.38629 1.38629 1.38629 1.38629
30459 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30460 21 3.02313 3.69864 0.10572 3.61510 21 - -
30461 1.38629 1.38629 1.38629 1.38629
30462 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30463 22 3.02313 3.69864 0.10572 3.61510 22 - -
30464 1.38629 1.38629 1.38629 1.38629
30465 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30466 23 1.90722 3.06142 0.28552 2.93628 23 - -
30467 1.38629 1.38629 1.38629 1.38629
30468 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30469 24 3.20158 2.66683 3.24536 0.16149 24 - -
30470 1.38629 1.38629 1.38629 1.38629
30471 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30472 25 2.74217 3.57362 0.13151 3.48193 25 - -
30473 1.38629 1.38629 1.38629 1.38629
30474 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30475 26 0.12813 3.49076 2.87327 3.40309 26 - -
30476 1.38629 1.38629 1.38629 1.38629
30477 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30478 27 3.55992 0.11605 3.60383 2.92044 27 - -
30479 1.38629 1.38629 1.38629 1.38629
30480 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30481 28 3.55992 0.11605 3.60383 2.92044 28 - -
30482 1.38629 1.38629 1.38629 1.38629
30483 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30484 29 3.46856 0.13448 3.51567 2.73426 29 - -
30485 1.38629 1.38629 1.38629 1.38629
30486 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30487 30 3.02313 3.69864 0.10572 3.61510 30 - -
30488 1.38629 1.38629 1.38629 1.38629
30489 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30490 31 3.55992 0.11605 3.60383 2.92044 31 - -
30491 1.38629 1.38629 1.38629 1.38629
30492 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30493 32 2.94225 2.07204 2.99664 0.25959 32 - -
30494 1.38629 1.38629 1.38629 1.38629
30495 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30496 33 3.02313 3.69864 0.10572 3.61510 33 - -
30497 1.38629 1.38629 1.38629 1.38629
30498 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30499 34 0.12813 3.49076 2.87327 3.40309 34 - -
30500 1.38629 1.38629 1.38629 1.38629
30501 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30502 35 2.82886 3.61528 0.12261 3.52664 35 - -
30503 1.38629 1.38629 1.38629 1.38629
30504 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30505 36 3.20158 2.66683 3.24536 0.16149 36 - -
30506 1.38629 1.38629 1.38629 1.38629
30507 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30508 37 3.20158 2.66683 3.24536 0.16149 37 - -
30509 1.38629 1.38629 1.38629 1.38629
30510 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30511 38 3.20158 2.66683 3.24536 0.16149 38 - -
30512 1.38629 1.38629 1.38629 1.38629
30513 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30514 39 0.12813 3.49076 2.87327 3.40309 39 - -
30515 1.38629 1.38629 1.38629 1.38629
30516 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30517 40 0.12813 3.49076 2.87327 3.40309 40 - -
30518 1.38629 1.38629 1.38629 1.38629
30519 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30520 41 3.02313 3.69864 0.10572 3.61510 41 - -
30521 1.38629 1.38629 1.38629 1.38629
30522 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30523 42 3.55992 0.11605 3.60383 2.92044 42 - -
30524 1.38629 1.38629 1.38629 1.38629
30525 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30526 43 0.12813 3.49076 2.87327 3.40309 43 - -
30527 1.38629 1.38629 1.38629 1.38629
30528 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30529 44 3.20158 2.66683 3.24536 0.16149 44 - -
30530 1.38629 1.38629 1.38629 1.38629
30531 0.03455 4.07572 4.07572 1.46634 0.26236 1.09861 0.40547
30532 45 0.12813 3.49076 2.87327 3.40309 45 - -
30533 1.38629 1.38629 1.38629 1.38629
30534 0.01742 4.05859 * 1.46634 0.26236 0.00000 *
30535 //
30536 HMMER3/b [3.0 | March 2010]
30537 NAME 4_LSU_Tracheophyta_4_LSU_start_sixteend_long
30538 LENG 45
30539 ALPH DNA
30540 RF no
30541 CS no
30542 MAP yes
30543 DATE Sun Feb 19 00:16:31 2012
30544 NSEQ 4
30545 EFFN 3.183594
30546 CKSUM 2286681022
30547 STATS LOCAL MSV -8.2107 0.71933
30548 STATS LOCAL VITERBI -7.8128 0.71933
30549 STATS LOCAL FORWARD -3.7084 0.71933
30550 HMM A C G T
30551 m->m m->i m->d i->m i->i d->m d->d
30552 COMPO 1.40199 1.23646 1.19419 1.82924
30553 1.38629 1.38629 1.38629 1.38629
30554 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 *
30555 1 0.14807 3.33468 2.77222 3.23207 1 - -
30556 1.38629 1.38629 1.38629 1.38629
30557 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30558 2 3.04283 2.56598 3.09273 0.18624 2 - -
30559 1.38629 1.38629 1.38629 1.38629
30560 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30561 3 2.91546 3.54130 0.12237 3.44120 3 - -
30562 1.38629 1.38629 1.38629 1.38629
30563 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30564 4 3.38051 0.13666 3.43217 2.79055 4 - -
30565 1.38629 1.38629 1.38629 1.38629
30566 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30567 5 2.91546 3.54130 0.12237 3.44120 5 - -
30568 1.38629 1.38629 1.38629 1.38629
30569 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30570 6 0.14807 3.33468 2.77222 3.23207 6 - -
30571 1.38629 1.38629 1.38629 1.38629
30572 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30573 7 3.38051 0.13666 3.43217 2.79055 7 - -
30574 1.38629 1.38629 1.38629 1.38629
30575 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30576 8 3.38051 0.13666 3.43217 2.79055 8 - -
30577 1.38629 1.38629 1.38629 1.38629
30578 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30579 9 3.38051 0.13666 3.43217 2.79055 9 - -
30580 1.38629 1.38629 1.38629 1.38629
30581 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30582 10 3.38051 0.13666 3.43217 2.79055 10 - -
30583 1.38629 1.38629 1.38629 1.38629
30584 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30585 11 0.14807 3.33468 2.77222 3.23207 11 - -
30586 1.38629 1.38629 1.38629 1.38629
30587 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30588 12 2.91546 3.54130 0.12237 3.44120 12 - -
30589 1.38629 1.38629 1.38629 1.38629
30590 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30591 13 2.91546 3.54130 0.12237 3.44120 13 - -
30592 1.38629 1.38629 1.38629 1.38629
30593 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30594 14 0.14807 3.33468 2.77222 3.23207 14 - -
30595 1.38629 1.38629 1.38629 1.38629
30596 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30597 15 3.04283 2.56598 3.09273 0.18624 15 - -
30598 1.38629 1.38629 1.38629 1.38629
30599 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30600 16 2.91546 3.54130 0.12237 3.44120 16 - -
30601 1.38629 1.38629 1.38629 1.38629
30602 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30603 17 2.91546 3.54130 0.12237 3.44120 17 - -
30604 1.38629 1.38629 1.38629 1.38629
30605 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30606 18 2.91546 3.54130 0.12237 3.44120 18 - -
30607 1.38629 1.38629 1.38629 1.38629
30608 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30609 19 3.38051 0.13666 3.43217 2.79055 19 - -
30610 1.38629 1.38629 1.38629 1.38629
30611 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30612 20 2.91546 3.54130 0.12237 3.44120 20 - -
30613 1.38629 1.38629 1.38629 1.38629
30614 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30615 21 0.14807 3.33468 2.77222 3.23207 21 - -
30616 1.38629 1.38629 1.38629 1.38629
30617 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30618 22 2.91546 3.54130 0.12237 3.44120 22 - -
30619 1.38629 1.38629 1.38629 1.38629
30620 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30621 23 2.91546 3.54130 0.12237 3.44120 23 - -
30622 1.38629 1.38629 1.38629 1.38629
30623 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30624 24 3.38051 0.13666 3.43217 2.79055 24 - -
30625 1.38629 1.38629 1.38629 1.38629
30626 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30627 25 3.38051 0.13666 3.43217 2.79055 25 - -
30628 1.38629 1.38629 1.38629 1.38629
30629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30630 26 0.14807 3.33468 2.77222 3.23207 26 - -
30631 1.38629 1.38629 1.38629 1.38629
30632 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30633 27 3.38051 0.13666 3.43217 2.79055 27 - -
30634 1.38629 1.38629 1.38629 1.38629
30635 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30636 28 3.38051 0.13666 3.43217 2.79055 28 - -
30637 1.38629 1.38629 1.38629 1.38629
30638 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30639 29 3.38051 0.13666 3.43217 2.79055 29 - -
30640 1.38629 1.38629 1.38629 1.38629
30641 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30642 30 2.91546 3.54130 0.12237 3.44120 30 - -
30643 1.38629 1.38629 1.38629 1.38629
30644 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30645 31 3.38051 0.13666 3.43217 2.79055 31 - -
30646 1.38629 1.38629 1.38629 1.38629
30647 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30648 32 2.60042 0.45814 2.67092 1.49561 32 - -
30649 1.38629 1.38629 1.38629 1.38629
30650 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30651 33 2.91546 3.54130 0.12237 3.44120 33 - -
30652 1.38629 1.38629 1.38629 1.38629
30653 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30654 34 0.14807 3.33468 2.77222 3.23207 34 - -
30655 1.38629 1.38629 1.38629 1.38629
30656 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30657 35 2.91546 3.54130 0.12237 3.44120 35 - -
30658 1.38629 1.38629 1.38629 1.38629
30659 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30660 36 3.04283 2.56598 3.09273 0.18624 36 - -
30661 1.38629 1.38629 1.38629 1.38629
30662 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30663 37 3.04283 2.56598 3.09273 0.18624 37 - -
30664 1.38629 1.38629 1.38629 1.38629
30665 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30666 38 3.04283 2.56598 3.09273 0.18624 38 - -
30667 1.38629 1.38629 1.38629 1.38629
30668 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30669 39 0.14807 3.33468 2.77222 3.23207 39 - -
30670 1.38629 1.38629 1.38629 1.38629
30671 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30672 40 0.14807 3.33468 2.77222 3.23207 40 - -
30673 1.38629 1.38629 1.38629 1.38629
30674 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30675 41 2.91546 3.54130 0.12237 3.44120 41 - -
30676 1.38629 1.38629 1.38629 1.38629
30677 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30678 42 3.38051 0.13666 3.43217 2.79055 42 - -
30679 1.38629 1.38629 1.38629 1.38629
30680 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30681 43 0.14807 3.33468 2.77222 3.23207 43 - -
30682 1.38629 1.38629 1.38629 1.38629
30683 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30684 44 3.04283 2.56598 3.09273 0.18624 44 - -
30685 1.38629 1.38629 1.38629 1.38629
30686 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547
30687 45 0.14807 3.33468 2.77222 3.23207 45 - -
30688 1.38629 1.38629 1.38629 1.38629
30689 0.01911 3.96719 * 1.46634 0.26236 0.00000 *
30690 //
30691 HMMER3/b [3.0 | March 2010]
30692 NAME 4_LSU_Tracheophyta_4_LSU_start_tena_long
30693 LENG 45
30694 ALPH DNA
30695 RF no
30696 CS no
30697 MAP yes
30698 DATE Sun Feb 19 00:13:56 2012
30699 NSEQ 26
30700 EFFN 3.164307
30701 CKSUM 3165523299
30702 STATS LOCAL MSV -8.2319 0.71931
30703 STATS LOCAL VITERBI -7.4689 0.71931
30704 STATS LOCAL FORWARD -4.1879 0.71931
30705 HMM A C G T
30706 m->m m->i m->d i->m i->i d->m d->d
30707 COMPO 1.34091 1.26975 1.31625 1.66413
30708 1.38629 1.38629 1.38629 1.38629
30709 0.03800 3.98235 3.98235 1.46634 0.26236 0.00000 *
30710 1 3.37302 0.13761 3.42498 2.78504 1 - -
30711 1.38629 1.38629 1.38629 1.38629
30712 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30713 2 3.37302 0.13761 3.42498 2.78504 2 - -
30714 1.38629 1.38629 1.38629 1.38629
30715 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30716 3 0.14897 3.32819 2.76797 3.22498 3 - -
30717 1.38629 1.38629 1.38629 1.38629
30718 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30719 4 3.03635 2.56184 3.08649 0.18734 4 - -
30720 1.38629 1.38629 1.38629 1.38629
30721 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30722 5 2.91085 3.53465 0.12314 3.43388 5 - -
30723 1.38629 1.38629 1.38629 1.38629
30724 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30725 6 0.14897 3.32819 2.76797 3.22498 6 - -
30726 1.38629 1.38629 1.38629 1.38629
30727 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30728 7 3.37302 0.13761 3.42498 2.78504 7 - -
30729 1.38629 1.38629 1.38629 1.38629
30730 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30731 8 3.37302 0.13761 3.42498 2.78504 8 - -
30732 1.38629 1.38629 1.38629 1.38629
30733 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30734 9 3.03635 2.56184 3.08649 0.18734 9 - -
30735 1.38629 1.38629 1.38629 1.38629
30736 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30737 10 3.37302 0.13761 3.42498 2.78504 10 - -
30738 1.38629 1.38629 1.38629 1.38629
30739 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30740 11 0.14897 3.32819 2.76797 3.22498 11 - -
30741 1.38629 1.38629 1.38629 1.38629
30742 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30743 12 2.91085 3.53465 0.12314 3.43388 12 - -
30744 1.38629 1.38629 1.38629 1.38629
30745 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30746 13 0.14897 3.32819 2.76797 3.22498 13 - -
30747 1.38629 1.38629 1.38629 1.38629
30748 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30749 14 3.03635 2.56184 3.08649 0.18734 14 - -
30750 1.38629 1.38629 1.38629 1.38629
30751 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30752 15 3.37302 0.13761 3.42498 2.78504 15 - -
30753 1.38629 1.38629 1.38629 1.38629
30754 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30755 16 0.14897 3.32819 2.76797 3.22498 16 - -
30756 1.38629 1.38629 1.38629 1.38629
30757 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30758 17 2.91085 3.53465 0.12314 3.43388 17 - -
30759 1.38629 1.38629 1.38629 1.38629
30760 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30761 18 0.14897 3.32819 2.76797 3.22498 18 - -
30762 1.38629 1.38629 1.38629 1.38629
30763 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30764 19 3.37302 0.13761 3.42498 2.78504 19 - -
30765 1.38629 1.38629 1.38629 1.38629
30766 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30767 20 2.91085 3.53465 0.12314 3.43388 20 - -
30768 1.38629 1.38629 1.38629 1.38629
30769 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30770 21 2.91085 3.53465 0.12314 3.43388 21 - -
30771 1.38629 1.38629 1.38629 1.38629
30772 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30773 22 2.91085 3.53465 0.12314 3.43388 22 - -
30774 1.38629 1.38629 1.38629 1.38629
30775 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30776 23 2.91085 3.53465 0.12314 3.43388 23 - -
30777 1.38629 1.38629 1.38629 1.38629
30778 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30779 24 3.37302 0.13761 3.42498 2.78504 24 - -
30780 1.38629 1.38629 1.38629 1.38629
30781 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30782 25 2.91085 3.53465 0.12314 3.43388 25 - -
30783 1.38629 1.38629 1.38629 1.38629
30784 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30785 26 0.14897 3.32819 2.76797 3.22498 26 - -
30786 1.38629 1.38629 1.38629 1.38629
30787 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30788 27 3.37302 0.13761 3.42498 2.78504 27 - -
30789 1.38629 1.38629 1.38629 1.38629
30790 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30791 28 3.37302 0.13761 3.42498 2.78504 28 - -
30792 1.38629 1.38629 1.38629 1.38629
30793 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30794 29 3.37302 0.13761 3.42498 2.78504 29 - -
30795 1.38629 1.38629 1.38629 1.38629
30796 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30797 30 2.91085 3.53465 0.12314 3.43388 30 - -
30798 1.38629 1.38629 1.38629 1.38629
30799 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30800 31 3.37302 0.13761 3.42498 2.78504 31 - -
30801 1.38629 1.38629 1.38629 1.38629
30802 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30803 32 3.03635 2.56184 3.08649 0.18734 32 - -
30804 1.38629 1.38629 1.38629 1.38629
30805 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30806 33 2.91085 3.53465 0.12314 3.43388 33 - -
30807 1.38629 1.38629 1.38629 1.38629
30808 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30809 34 0.14897 3.32819 2.76797 3.22498 34 - -
30810 1.38629 1.38629 1.38629 1.38629
30811 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30812 35 2.91085 3.53465 0.12314 3.43388 35 - -
30813 1.38629 1.38629 1.38629 1.38629
30814 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30815 36 3.03635 2.56184 3.08649 0.18734 36 - -
30816 1.38629 1.38629 1.38629 1.38629
30817 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30818 37 3.03635 2.56184 3.08649 0.18734 37 - -
30819 1.38629 1.38629 1.38629 1.38629
30820 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30821 38 3.03635 2.56184 3.08649 0.18734 38 - -
30822 1.38629 1.38629 1.38629 1.38629
30823 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30824 39 0.14897 3.32819 2.76797 3.22498 39 - -
30825 1.38629 1.38629 1.38629 1.38629
30826 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30827 40 0.14897 3.32819 2.76797 3.22498 40 - -
30828 1.38629 1.38629 1.38629 1.38629
30829 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30830 41 2.91085 3.53465 0.12314 3.43388 41 - -
30831 1.38629 1.38629 1.38629 1.38629
30832 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30833 42 3.37302 0.13761 3.42498 2.78504 42 - -
30834 1.38629 1.38629 1.38629 1.38629
30835 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30836 43 0.14897 3.32819 2.76797 3.22498 43 - -
30837 1.38629 1.38629 1.38629 1.38629
30838 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30839 44 3.03635 2.56184 3.08649 0.18734 44 - -
30840 1.38629 1.38629 1.38629 1.38629
30841 0.03800 3.98235 3.98235 1.46634 0.26236 1.09861 0.40547
30842 45 0.14897 3.32819 2.76797 3.22498 45 - -
30843 1.38629 1.38629 1.38629 1.38629
30844 0.01918 3.96353 * 1.46634 0.26236 0.00000 *
30845 //
30846 HMMER3/b [3.0 | March 2010]
30847 NAME 4_LSU_Tracheophyta_4_LSU_start_tenb_long
30848 LENG 45
30849 ALPH DNA
30850 RF no
30851 CS no
30852 MAP yes
30853 DATE Sun Feb 19 00:14:01 2012
30854 NSEQ 3
30855 EFFN 3.000000
30856 CKSUM 2046295705
30857 STATS LOCAL MSV -7.9249 0.71995
30858 STATS LOCAL VITERBI -7.7263 0.71995
30859 STATS LOCAL FORWARD -3.7672 0.71995
30860 HMM A C G T
30861 m->m m->i m->d i->m i->i d->m d->d
30862 COMPO 1.33690 1.33800 1.25294 1.66437
30863 1.38629 1.38629 1.38629 1.38629
30864 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
30865 1 0.15719 3.27118 2.73043 3.16274 1 - -
30866 1.38629 1.38629 1.38629 1.38629
30867 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30868 2 0.15719 3.27118 2.73043 3.16274 2 - -
30869 1.38629 1.38629 1.38629 1.38629
30870 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30871 3 2.86982 3.47591 0.13017 3.36931 3 - -
30872 1.38629 1.38629 1.38629 1.38629
30873 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30874 4 3.30705 0.14631 3.36166 2.73626 4 - -
30875 1.38629 1.38629 1.38629 1.38629
30876 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30877 5 2.86982 3.47591 0.13017 3.36931 5 - -
30878 1.38629 1.38629 1.38629 1.38629
30879 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30880 6 0.15719 3.27118 2.73043 3.16274 6 - -
30881 1.38629 1.38629 1.38629 1.38629
30882 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30883 7 3.30705 0.14631 3.36166 2.73626 7 - -
30884 1.38629 1.38629 1.38629 1.38629
30885 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30886 8 3.30705 0.14631 3.36166 2.73626 8 - -
30887 1.38629 1.38629 1.38629 1.38629
30888 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30889 9 3.30705 0.14631 3.36166 2.73626 9 - -
30890 1.38629 1.38629 1.38629 1.38629
30891 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30892 10 3.30705 0.14631 3.36166 2.73626 10 - -
30893 1.38629 1.38629 1.38629 1.38629
30894 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30895 11 0.15719 3.27118 2.73043 3.16274 11 - -
30896 1.38629 1.38629 1.38629 1.38629
30897 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30898 12 2.86982 3.47591 0.13017 3.36931 12 - -
30899 1.38629 1.38629 1.38629 1.38629
30900 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30901 13 2.86982 3.47591 0.13017 3.36931 13 - -
30902 1.38629 1.38629 1.38629 1.38629
30903 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30904 14 2.97980 2.52563 3.03204 0.19727 14 - -
30905 1.38629 1.38629 1.38629 1.38629
30906 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30907 15 3.30705 0.14631 3.36166 2.73626 15 - -
30908 1.38629 1.38629 1.38629 1.38629
30909 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30910 16 0.15719 3.27118 2.73043 3.16274 16 - -
30911 1.38629 1.38629 1.38629 1.38629
30912 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30913 17 2.86982 3.47591 0.13017 3.36931 17 - -
30914 1.38629 1.38629 1.38629 1.38629
30915 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30916 18 2.86982 3.47591 0.13017 3.36931 18 - -
30917 1.38629 1.38629 1.38629 1.38629
30918 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30919 19 3.30705 0.14631 3.36166 2.73626 19 - -
30920 1.38629 1.38629 1.38629 1.38629
30921 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30922 20 2.86982 3.47591 0.13017 3.36931 20 - -
30923 1.38629 1.38629 1.38629 1.38629
30924 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30925 21 2.86982 3.47591 0.13017 3.36931 21 - -
30926 1.38629 1.38629 1.38629 1.38629
30927 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30928 22 2.86982 3.47591 0.13017 3.36931 22 - -
30929 1.38629 1.38629 1.38629 1.38629
30930 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30931 23 0.15719 3.27118 2.73043 3.16274 23 - -
30932 1.38629 1.38629 1.38629 1.38629
30933 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30934 24 2.97980 2.52563 3.03204 0.19727 24 - -
30935 1.38629 1.38629 1.38629 1.38629
30936 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30937 25 2.97980 2.52563 3.03204 0.19727 25 - -
30938 1.38629 1.38629 1.38629 1.38629
30939 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30940 26 0.15719 3.27118 2.73043 3.16274 26 - -
30941 1.38629 1.38629 1.38629 1.38629
30942 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30943 27 3.30705 0.14631 3.36166 2.73626 27 - -
30944 1.38629 1.38629 1.38629 1.38629
30945 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30946 28 3.30705 0.14631 3.36166 2.73626 28 - -
30947 1.38629 1.38629 1.38629 1.38629
30948 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30949 29 3.30705 0.14631 3.36166 2.73626 29 - -
30950 1.38629 1.38629 1.38629 1.38629
30951 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30952 30 2.86982 3.47591 0.13017 3.36931 30 - -
30953 1.38629 1.38629 1.38629 1.38629
30954 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30955 31 3.30705 0.14631 3.36166 2.73626 31 - -
30956 1.38629 1.38629 1.38629 1.38629
30957 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30958 32 2.97980 2.52563 3.03204 0.19727 32 - -
30959 1.38629 1.38629 1.38629 1.38629
30960 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30961 33 2.86982 3.47591 0.13017 3.36931 33 - -
30962 1.38629 1.38629 1.38629 1.38629
30963 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30964 34 0.15719 3.27118 2.73043 3.16274 34 - -
30965 1.38629 1.38629 1.38629 1.38629
30966 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30967 35 2.86982 3.47591 0.13017 3.36931 35 - -
30968 1.38629 1.38629 1.38629 1.38629
30969 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30970 36 2.97980 2.52563 3.03204 0.19727 36 - -
30971 1.38629 1.38629 1.38629 1.38629
30972 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30973 37 2.97980 2.52563 3.03204 0.19727 37 - -
30974 1.38629 1.38629 1.38629 1.38629
30975 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30976 38 2.97980 2.52563 3.03204 0.19727 38 - -
30977 1.38629 1.38629 1.38629 1.38629
30978 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30979 39 0.15719 3.27118 2.73043 3.16274 39 - -
30980 1.38629 1.38629 1.38629 1.38629
30981 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30982 40 0.15719 3.27118 2.73043 3.16274 40 - -
30983 1.38629 1.38629 1.38629 1.38629
30984 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30985 41 2.86982 3.47591 0.13017 3.36931 41 - -
30986 1.38629 1.38629 1.38629 1.38629
30987 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30988 42 3.30705 0.14631 3.36166 2.73626 42 - -
30989 1.38629 1.38629 1.38629 1.38629
30990 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30991 43 0.15719 3.27118 2.73043 3.16274 43 - -
30992 1.38629 1.38629 1.38629 1.38629
30993 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30994 44 2.97980 2.52563 3.03204 0.19727 44 - -
30995 1.38629 1.38629 1.38629 1.38629
30996 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
30997 45 0.15719 3.27118 2.73043 3.16274 45 - -
30998 1.38629 1.38629 1.38629 1.38629
30999 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
31000 //
31001 HMMER3/b [3.0 | March 2010]
31002 NAME 4_LSU_Tracheophyta_4_LSU_start_tenc_long
31003 LENG 45
31004 ALPH DNA
31005 RF no
31006 CS no
31007 MAP yes
31008 DATE Sun Feb 19 00:14:06 2012
31009 NSEQ 40
31010 EFFN 3.530273
31011 CKSUM 467818289
31012 STATS LOCAL MSV -7.5640 0.71931
31013 STATS LOCAL VITERBI -7.7188 0.71931
31014 STATS LOCAL FORWARD -4.4311 0.71931
31015 HMM A C G T
31016 m->m m->i m->d i->m i->i d->m d->d
31017 COMPO 1.32237 1.45329 1.27317 1.51525
31018 1.38629 1.38629 1.38629 1.38629
31019 0.03553 4.04835 4.04835 1.46634 0.26236 0.00000 *
31020 1 2.61303 2.95298 0.25551 2.30275 1 - -
31021 1.38629 1.38629 1.38629 1.38629
31022 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31023 2 2.44058 2.33281 0.33394 2.30489 2 - -
31024 1.38629 1.38629 1.38629 1.38629
31025 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31026 3 2.65822 2.42613 2.22125 0.31051 3 - -
31027 1.38629 1.38629 1.38629 1.38629
31028 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31029 4 2.91618 2.09568 2.97112 0.25925 4 - -
31030 1.38629 1.38629 1.38629 1.38629
31031 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31032 5 2.99181 3.65250 0.11032 3.56399 5 - -
31033 1.38629 1.38629 1.38629 1.38629
31034 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31035 6 0.13370 3.44448 2.84348 3.35230 6 - -
31036 1.38629 1.38629 1.38629 1.38629
31037 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31038 7 3.50695 0.12174 3.55321 2.88245 7 - -
31039 1.38629 1.38629 1.38629 1.38629
31040 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31041 8 3.50695 0.12174 3.55321 2.88245 8 - -
31042 1.38629 1.38629 1.38629 1.38629
31043 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31044 9 3.15391 2.63661 3.19955 0.16850 9 - -
31045 1.38629 1.38629 1.38629 1.38629
31046 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31047 10 3.50695 0.12174 3.55321 2.88245 10 - -
31048 1.38629 1.38629 1.38629 1.38629
31049 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31050 11 2.99181 3.65250 0.11032 3.56399 11 - -
31051 1.38629 1.38629 1.38629 1.38629
31052 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31053 12 2.99181 3.65250 0.11032 3.56399 12 - -
31054 1.38629 1.38629 1.38629 1.38629
31055 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31056 13 0.13370 3.44448 2.84348 3.35230 13 - -
31057 1.38629 1.38629 1.38629 1.38629
31058 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31059 14 3.15391 2.63661 3.19955 0.16850 14 - -
31060 1.38629 1.38629 1.38629 1.38629
31061 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31062 15 3.50695 0.12174 3.55321 2.88245 15 - -
31063 1.38629 1.38629 1.38629 1.38629
31064 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31065 16 0.13370 3.44448 2.84348 3.35230 16 - -
31066 1.38629 1.38629 1.38629 1.38629
31067 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31068 17 2.99181 3.65250 0.11032 3.56399 17 - -
31069 1.38629 1.38629 1.38629 1.38629
31070 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31071 18 2.36092 3.32322 0.18704 3.21335 18 - -
31072 1.38629 1.38629 1.38629 1.38629
31073 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31074 19 3.15391 2.63661 3.19955 0.16850 19 - -
31075 1.38629 1.38629 1.38629 1.38629
31076 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31077 20 0.13370 3.44448 2.84348 3.35230 20 - -
31078 1.38629 1.38629 1.38629 1.38629
31079 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31080 21 2.99181 3.65250 0.11032 3.56399 21 - -
31081 1.38629 1.38629 1.38629 1.38629
31082 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31083 22 2.99181 3.65250 0.11032 3.56399 22 - -
31084 1.38629 1.38629 1.38629 1.38629
31085 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31086 23 2.34723 3.31471 0.18943 3.20429 23 - -
31087 1.38629 1.38629 1.38629 1.38629
31088 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31089 24 0.13370 3.44448 2.84348 3.35230 24 - -
31090 1.38629 1.38629 1.38629 1.38629
31091 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31092 25 3.15391 2.63661 3.19955 0.16850 25 - -
31093 1.38629 1.38629 1.38629 1.38629
31094 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31095 26 0.13370 3.44448 2.84348 3.35230 26 - -
31096 1.38629 1.38629 1.38629 1.38629
31097 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31098 27 3.50695 0.12174 3.55321 2.88245 27 - -
31099 1.38629 1.38629 1.38629 1.38629
31100 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31101 28 3.50695 0.12174 3.55321 2.88245 28 - -
31102 1.38629 1.38629 1.38629 1.38629
31103 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31104 29 3.50695 0.12174 3.55321 2.88245 29 - -
31105 1.38629 1.38629 1.38629 1.38629
31106 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31107 30 2.99181 3.65250 0.11032 3.56399 30 - -
31108 1.38629 1.38629 1.38629 1.38629
31109 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31110 31 3.50695 0.12174 3.55321 2.88245 31 - -
31111 1.38629 1.38629 1.38629 1.38629
31112 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31113 32 3.15391 2.63661 3.19955 0.16850 32 - -
31114 1.38629 1.38629 1.38629 1.38629
31115 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31116 33 2.99181 3.65250 0.11032 3.56399 33 - -
31117 1.38629 1.38629 1.38629 1.38629
31118 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31119 34 0.13370 3.44448 2.84348 3.35230 34 - -
31120 1.38629 1.38629 1.38629 1.38629
31121 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31122 35 0.13370 3.44448 2.84348 3.35230 35 - -
31123 1.38629 1.38629 1.38629 1.38629
31124 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31125 36 3.50695 0.12174 3.55321 2.88245 36 - -
31126 1.38629 1.38629 1.38629 1.38629
31127 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31128 37 3.15391 2.63661 3.19955 0.16850 37 - -
31129 1.38629 1.38629 1.38629 1.38629
31130 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31131 38 3.15391 2.63661 3.19955 0.16850 38 - -
31132 1.38629 1.38629 1.38629 1.38629
31133 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31134 39 0.13370 3.44448 2.84348 3.35230 39 - -
31135 1.38629 1.38629 1.38629 1.38629
31136 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31137 40 0.13370 3.44448 2.84348 3.35230 40 - -
31138 1.38629 1.38629 1.38629 1.38629
31139 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31140 41 2.99181 3.65250 0.11032 3.56399 41 - -
31141 1.38629 1.38629 1.38629 1.38629
31142 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31143 42 3.50695 0.12174 3.55321 2.88245 42 - -
31144 1.38629 1.38629 1.38629 1.38629
31145 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31146 43 0.13370 3.44448 2.84348 3.35230 43 - -
31147 1.38629 1.38629 1.38629 1.38629
31148 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31149 44 3.15391 2.63661 3.19955 0.16850 44 - -
31150 1.38629 1.38629 1.38629 1.38629
31151 0.03553 4.04835 4.04835 1.46634 0.26236 1.09861 0.40547
31152 45 0.13370 3.44448 2.84348 3.35230 45 - -
31153 1.38629 1.38629 1.38629 1.38629
31154 0.01792 4.03074 * 1.46634 0.26236 0.00000 *
31155 //
31156 HMMER3/b [3.0 | March 2010]
31157 NAME 4_LSU_Tracheophyta_4_LSU_start_tend_long
31158 LENG 45
31159 ALPH DNA
31160 RF no
31161 CS no
31162 MAP yes
31163 DATE Sun Feb 19 00:14:17 2012
31164 NSEQ 2
31165 EFFN 2.000000
31166 CKSUM 1093890755
31167 STATS LOCAL MSV -7.6566 0.72767
31168 STATS LOCAL VITERBI -8.0882 0.72767
31169 STATS LOCAL FORWARD -3.7441 0.72767
31170 HMM A C G T
31171 m->m m->i m->d i->m i->i d->m d->d
31172 COMPO 1.28646 1.40926 1.31540 1.55560
31173 1.38629 1.38629 1.38629 1.38629
31174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
31175 1 0.23862 2.84929 2.43386 2.70756 1 - -
31176 1.38629 1.38629 1.38629 1.38629
31177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31178 2 2.81865 0.23582 2.88868 2.35662 2 - -
31179 1.38629 1.38629 1.38629 1.38629
31180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31181 3 0.23862 2.84929 2.43386 2.70756 3 - -
31182 1.38629 1.38629 1.38629 1.38629
31183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31184 4 2.57915 2.25909 2.64442 0.28946 4 - -
31185 1.38629 1.38629 1.38629 1.38629
31186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31187 5 2.53331 3.02441 0.20344 2.88069 5 - -
31188 1.38629 1.38629 1.38629 1.38629
31189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31190 6 0.23862 2.84929 2.43386 2.70756 6 - -
31191 1.38629 1.38629 1.38629 1.38629
31192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31193 7 2.81865 0.23582 2.88868 2.35662 7 - -
31194 1.38629 1.38629 1.38629 1.38629
31195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31196 8 2.81865 0.23582 2.88868 2.35662 8 - -
31197 1.38629 1.38629 1.38629 1.38629
31198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31199 9 2.57915 2.25909 2.64442 0.28946 9 - -
31200 1.38629 1.38629 1.38629 1.38629
31201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31202 10 2.81865 0.23582 2.88868 2.35662 10 - -
31203 1.38629 1.38629 1.38629 1.38629
31204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31205 11 0.23862 2.84929 2.43386 2.70756 11 - -
31206 1.38629 1.38629 1.38629 1.38629
31207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31208 12 2.53331 3.02441 0.20344 2.88069 12 - -
31209 1.38629 1.38629 1.38629 1.38629
31210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31211 13 0.23862 2.84929 2.43386 2.70756 13 - -
31212 1.38629 1.38629 1.38629 1.38629
31213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31214 14 2.57915 2.25909 2.64442 0.28946 14 - -
31215 1.38629 1.38629 1.38629 1.38629
31216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31217 15 2.81865 0.23582 2.88868 2.35662 15 - -
31218 1.38629 1.38629 1.38629 1.38629
31219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31220 16 0.23862 2.84929 2.43386 2.70756 16 - -
31221 1.38629 1.38629 1.38629 1.38629
31222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31223 17 2.53331 3.02441 0.20344 2.88069 17 - -
31224 1.38629 1.38629 1.38629 1.38629
31225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31226 18 2.53331 3.02441 0.20344 2.88069 18 - -
31227 1.38629 1.38629 1.38629 1.38629
31228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31229 19 2.57915 2.25909 2.64442 0.28946 19 - -
31230 1.38629 1.38629 1.38629 1.38629
31231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31232 20 2.53331 3.02441 0.20344 2.88069 20 - -
31233 1.38629 1.38629 1.38629 1.38629
31234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31235 21 2.53331 3.02441 0.20344 2.88069 21 - -
31236 1.38629 1.38629 1.38629 1.38629
31237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31238 22 2.53331 3.02441 0.20344 2.88069 22 - -
31239 1.38629 1.38629 1.38629 1.38629
31240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31241 23 2.53331 3.02441 0.20344 2.88069 23 - -
31242 1.38629 1.38629 1.38629 1.38629
31243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31244 24 2.81865 0.23582 2.88868 2.35662 24 - -
31245 1.38629 1.38629 1.38629 1.38629
31246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31247 25 0.23862 2.84929 2.43386 2.70756 25 - -
31248 1.38629 1.38629 1.38629 1.38629
31249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31250 26 0.23862 2.84929 2.43386 2.70756 26 - -
31251 1.38629 1.38629 1.38629 1.38629
31252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31253 27 2.81865 0.23582 2.88868 2.35662 27 - -
31254 1.38629 1.38629 1.38629 1.38629
31255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31256 28 2.81865 0.23582 2.88868 2.35662 28 - -
31257 1.38629 1.38629 1.38629 1.38629
31258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31259 29 2.81865 0.23582 2.88868 2.35662 29 - -
31260 1.38629 1.38629 1.38629 1.38629
31261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31262 30 2.53331 3.02441 0.20344 2.88069 30 - -
31263 1.38629 1.38629 1.38629 1.38629
31264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31265 31 2.81865 0.23582 2.88868 2.35662 31 - -
31266 1.38629 1.38629 1.38629 1.38629
31267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31268 32 2.57915 2.25909 2.64442 0.28946 32 - -
31269 1.38629 1.38629 1.38629 1.38629
31270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31271 33 2.53331 3.02441 0.20344 2.88069 33 - -
31272 1.38629 1.38629 1.38629 1.38629
31273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31274 34 0.23862 2.84929 2.43386 2.70756 34 - -
31275 1.38629 1.38629 1.38629 1.38629
31276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31277 35 2.53331 3.02441 0.20344 2.88069 35 - -
31278 1.38629 1.38629 1.38629 1.38629
31279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31280 36 2.57915 2.25909 2.64442 0.28946 36 - -
31281 1.38629 1.38629 1.38629 1.38629
31282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31283 37 2.57915 2.25909 2.64442 0.28946 37 - -
31284 1.38629 1.38629 1.38629 1.38629
31285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31286 38 2.57915 2.25909 2.64442 0.28946 38 - -
31287 1.38629 1.38629 1.38629 1.38629
31288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31289 39 0.23862 2.84929 2.43386 2.70756 39 - -
31290 1.38629 1.38629 1.38629 1.38629
31291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31292 40 0.23862 2.84929 2.43386 2.70756 40 - -
31293 1.38629 1.38629 1.38629 1.38629
31294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31295 41 2.53331 3.02441 0.20344 2.88069 41 - -
31296 1.38629 1.38629 1.38629 1.38629
31297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31298 42 2.81865 0.23582 2.88868 2.35662 42 - -
31299 1.38629 1.38629 1.38629 1.38629
31300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31301 43 0.23862 2.84929 2.43386 2.70756 43 - -
31302 1.38629 1.38629 1.38629 1.38629
31303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31304 44 2.57915 2.25909 2.64442 0.28946 44 - -
31305 1.38629 1.38629 1.38629 1.38629
31306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31307 45 0.23862 2.84929 2.43386 2.70756 45 - -
31308 1.38629 1.38629 1.38629 1.38629
31309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
31310 //
31311 HMMER3/b [3.0 | March 2010]
31312 NAME 4_LSU_Tracheophyta_4_LSU_start_thirteen_long
31313 LENG 45
31314 ALPH DNA
31315 RF no
31316 CS no
31317 MAP yes
31318 DATE Sun Feb 19 00:15:42 2012
31319 NSEQ 4
31320 EFFN 3.261719
31321 CKSUM 176532526
31322 STATS LOCAL MSV -7.9592 0.71933
31323 STATS LOCAL VITERBI -7.7561 0.71933
31324 STATS LOCAL FORWARD -3.8855 0.71933
31325 HMM A C G T
31326 m->m m->i m->d i->m i->i d->m d->d
31327 COMPO 1.27518 1.32049 1.37718 1.60284
31328 1.38629 1.38629 1.38629 1.38629
31329 0.03731 4.00035 4.00035 1.46634 0.26236 0.00000 *
31330 1 2.58317 1.56516 2.64901 0.43899 1 - -
31331 1.38629 1.38629 1.38629 1.38629
31332 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31333 2 0.14453 3.36055 2.78910 3.26035 2 - -
31334 1.38629 1.38629 1.38629 1.38629
31335 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31336 3 2.93372 3.56771 0.11938 3.47031 3 - -
31337 1.38629 1.38629 1.38629 1.38629
31338 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31339 4 3.41037 0.13295 3.46079 2.81242 4 - -
31340 1.38629 1.38629 1.38629 1.38629
31341 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31342 5 2.93372 3.56771 0.11938 3.47031 5 - -
31343 1.38629 1.38629 1.38629 1.38629
31344 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31345 6 0.14453 3.36055 2.78910 3.26035 6 - -
31346 1.38629 1.38629 1.38629 1.38629
31347 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31348 7 3.41037 0.13295 3.46079 2.81242 7 - -
31349 1.38629 1.38629 1.38629 1.38629
31350 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31351 8 3.41037 0.13295 3.46079 2.81242 8 - -
31352 1.38629 1.38629 1.38629 1.38629
31353 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31354 9 3.41037 0.13295 3.46079 2.81242 9 - -
31355 1.38629 1.38629 1.38629 1.38629
31356 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31357 10 3.41037 0.13295 3.46079 2.81242 10 - -
31358 1.38629 1.38629 1.38629 1.38629
31359 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31360 11 0.14453 3.36055 2.78910 3.26035 11 - -
31361 1.38629 1.38629 1.38629 1.38629
31362 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31363 12 0.14453 3.36055 2.78910 3.26035 12 - -
31364 1.38629 1.38629 1.38629 1.38629
31365 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31366 13 2.93372 3.56771 0.11938 3.47031 13 - -
31367 1.38629 1.38629 1.38629 1.38629
31368 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31369 14 3.06875 2.58250 3.11766 0.18191 14 - -
31370 1.38629 1.38629 1.38629 1.38629
31371 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31372 15 3.41037 0.13295 3.46079 2.81242 15 - -
31373 1.38629 1.38629 1.38629 1.38629
31374 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31375 16 0.14453 3.36055 2.78910 3.26035 16 - -
31376 1.38629 1.38629 1.38629 1.38629
31377 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31378 17 2.93372 3.56771 0.11938 3.47031 17 - -
31379 1.38629 1.38629 1.38629 1.38629
31380 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31381 18 2.93372 3.56771 0.11938 3.47031 18 - -
31382 1.38629 1.38629 1.38629 1.38629
31383 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31384 19 3.06875 2.58250 3.11766 0.18191 19 - -
31385 1.38629 1.38629 1.38629 1.38629
31386 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31387 20 2.93372 3.56771 0.11938 3.47031 20 - -
31388 1.38629 1.38629 1.38629 1.38629
31389 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31390 21 2.93372 3.56771 0.11938 3.47031 21 - -
31391 1.38629 1.38629 1.38629 1.38629
31392 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31393 22 2.93372 3.56771 0.11938 3.47031 22 - -
31394 1.38629 1.38629 1.38629 1.38629
31395 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31396 23 0.14453 3.36055 2.78910 3.26035 23 - -
31397 1.38629 1.38629 1.38629 1.38629
31398 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31399 24 3.06875 2.58250 3.11766 0.18191 24 - -
31400 1.38629 1.38629 1.38629 1.38629
31401 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31402 25 3.06875 2.58250 3.11766 0.18191 25 - -
31403 1.38629 1.38629 1.38629 1.38629
31404 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31405 26 0.14453 3.36055 2.78910 3.26035 26 - -
31406 1.38629 1.38629 1.38629 1.38629
31407 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31408 27 3.41037 0.13295 3.46079 2.81242 27 - -
31409 1.38629 1.38629 1.38629 1.38629
31410 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31411 28 3.41037 0.13295 3.46079 2.81242 28 - -
31412 1.38629 1.38629 1.38629 1.38629
31413 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31414 29 3.41037 0.13295 3.46079 2.81242 29 - -
31415 1.38629 1.38629 1.38629 1.38629
31416 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31417 30 2.93372 3.56771 0.11938 3.47031 30 - -
31418 1.38629 1.38629 1.38629 1.38629
31419 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31420 31 3.41037 0.13295 3.46079 2.81242 31 - -
31421 1.38629 1.38629 1.38629 1.38629
31422 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31423 32 3.06875 2.58250 3.11766 0.18191 32 - -
31424 1.38629 1.38629 1.38629 1.38629
31425 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31426 33 2.93372 3.56771 0.11938 3.47031 33 - -
31427 1.38629 1.38629 1.38629 1.38629
31428 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31429 34 0.14453 3.36055 2.78910 3.26035 34 - -
31430 1.38629 1.38629 1.38629 1.38629
31431 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31432 35 0.14453 3.36055 2.78910 3.26035 35 - -
31433 1.38629 1.38629 1.38629 1.38629
31434 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31435 36 3.41037 0.13295 3.46079 2.81242 36 - -
31436 1.38629 1.38629 1.38629 1.38629
31437 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31438 37 3.06875 2.58250 3.11766 0.18191 37 - -
31439 1.38629 1.38629 1.38629 1.38629
31440 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31441 38 3.06875 2.58250 3.11766 0.18191 38 - -
31442 1.38629 1.38629 1.38629 1.38629
31443 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31444 39 0.14453 3.36055 2.78910 3.26035 39 - -
31445 1.38629 1.38629 1.38629 1.38629
31446 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31447 40 0.14453 3.36055 2.78910 3.26035 40 - -
31448 1.38629 1.38629 1.38629 1.38629
31449 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31450 41 2.93372 3.56771 0.11938 3.47031 41 - -
31451 1.38629 1.38629 1.38629 1.38629
31452 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31453 42 3.41037 0.13295 3.46079 2.81242 42 - -
31454 1.38629 1.38629 1.38629 1.38629
31455 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31456 43 0.14453 3.36055 2.78910 3.26035 43 - -
31457 1.38629 1.38629 1.38629 1.38629
31458 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31459 44 3.06875 2.58250 3.11766 0.18191 44 - -
31460 1.38629 1.38629 1.38629 1.38629
31461 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547
31462 45 0.14453 3.36055 2.78910 3.26035 45 - -
31463 1.38629 1.38629 1.38629 1.38629
31464 0.01883 3.98187 * 1.46634 0.26236 0.00000 *
31465 //
31466 HMMER3/b [3.0 | March 2010]
31467 NAME 4_LSU_Tracheophyta_4_LSU_start_thirtyfive_long
31468 LENG 45
31469 ALPH DNA
31470 RF no
31471 CS no
31472 MAP yes
31473 DATE Sun Feb 19 00:23:58 2012
31474 NSEQ 2
31475 EFFN 2.000000
31476 CKSUM 2544106313
31477 STATS LOCAL MSV -7.5247 0.72735
31478 STATS LOCAL VITERBI -8.3438 0.72735
31479 STATS LOCAL FORWARD -3.2438 0.72735
31480 HMM A C G T
31481 m->m m->i m->d i->m i->i d->m d->d
31482 COMPO 1.34271 1.30420 1.26361 1.68825
31483 1.38629 1.38629 1.38629 1.38629
31484 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
31485 1 0.23862 2.84929 2.43386 2.70756 1 - -
31486 1.38629 1.38629 1.38629 1.38629
31487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31488 2 2.57915 2.25909 2.64442 0.28946 2 - -
31489 1.38629 1.38629 1.38629 1.38629
31490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31491 3 2.53331 3.02441 0.20344 2.88069 3 - -
31492 1.38629 1.38629 1.38629 1.38629
31493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31494 4 2.81865 0.23582 2.88868 2.35662 4 - -
31495 1.38629 1.38629 1.38629 1.38629
31496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31497 5 2.53331 3.02441 0.20344 2.88069 5 - -
31498 1.38629 1.38629 1.38629 1.38629
31499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31500 6 0.23862 2.84929 2.43386 2.70756 6 - -
31501 1.38629 1.38629 1.38629 1.38629
31502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31503 7 2.81865 0.23582 2.88868 2.35662 7 - -
31504 1.38629 1.38629 1.38629 1.38629
31505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31506 8 2.81865 0.23582 2.88868 2.35662 8 - -
31507 1.38629 1.38629 1.38629 1.38629
31508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31509 9 2.81865 0.23582 2.88868 2.35662 9 - -
31510 1.38629 1.38629 1.38629 1.38629
31511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31512 10 2.81865 0.23582 2.88868 2.35662 10 - -
31513 1.38629 1.38629 1.38629 1.38629
31514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31515 11 0.23862 2.84929 2.43386 2.70756 11 - -
31516 1.38629 1.38629 1.38629 1.38629
31517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31518 12 2.53331 3.02441 0.20344 2.88069 12 - -
31519 1.38629 1.38629 1.38629 1.38629
31520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31521 13 2.53331 3.02441 0.20344 2.88069 13 - -
31522 1.38629 1.38629 1.38629 1.38629
31523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31524 14 0.23862 2.84929 2.43386 2.70756 14 - -
31525 1.38629 1.38629 1.38629 1.38629
31526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31527 15 2.57915 2.25909 2.64442 0.28946 15 - -
31528 1.38629 1.38629 1.38629 1.38629
31529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31530 16 2.53331 3.02441 0.20344 2.88069 16 - -
31531 1.38629 1.38629 1.38629 1.38629
31532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31533 17 2.53331 3.02441 0.20344 2.88069 17 - -
31534 1.38629 1.38629 1.38629 1.38629
31535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31536 18 2.53331 3.02441 0.20344 2.88069 18 - -
31537 1.38629 1.38629 1.38629 1.38629
31538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31539 19 2.81865 0.23582 2.88868 2.35662 19 - -
31540 1.38629 1.38629 1.38629 1.38629
31541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31542 20 2.53331 3.02441 0.20344 2.88069 20 - -
31543 1.38629 1.38629 1.38629 1.38629
31544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31545 21 0.23862 2.84929 2.43386 2.70756 21 - -
31546 1.38629 1.38629 1.38629 1.38629
31547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31548 22 2.53331 3.02441 0.20344 2.88069 22 - -
31549 1.38629 1.38629 1.38629 1.38629
31550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31551 23 0.23862 2.84929 2.43386 2.70756 23 - -
31552 1.38629 1.38629 1.38629 1.38629
31553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31554 24 2.81865 0.23582 2.88868 2.35662 24 - -
31555 1.38629 1.38629 1.38629 1.38629
31556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31557 25 2.57915 2.25909 2.64442 0.28946 25 - -
31558 1.38629 1.38629 1.38629 1.38629
31559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31560 26 0.23862 2.84929 2.43386 2.70756 26 - -
31561 1.38629 1.38629 1.38629 1.38629
31562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31563 27 2.81865 0.23582 2.88868 2.35662 27 - -
31564 1.38629 1.38629 1.38629 1.38629
31565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31566 28 2.81865 0.23582 2.88868 2.35662 28 - -
31567 1.38629 1.38629 1.38629 1.38629
31568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31569 29 2.81865 0.23582 2.88868 2.35662 29 - -
31570 1.38629 1.38629 1.38629 1.38629
31571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31572 30 2.53331 3.02441 0.20344 2.88069 30 - -
31573 1.38629 1.38629 1.38629 1.38629
31574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31575 31 2.81865 0.23582 2.88868 2.35662 31 - -
31576 1.38629 1.38629 1.38629 1.38629
31577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31578 32 2.81865 0.23582 2.88868 2.35662 32 - -
31579 1.38629 1.38629 1.38629 1.38629
31580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31581 33 2.53331 3.02441 0.20344 2.88069 33 - -
31582 1.38629 1.38629 1.38629 1.38629
31583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31584 34 0.23862 2.84929 2.43386 2.70756 34 - -
31585 1.38629 1.38629 1.38629 1.38629
31586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31587 35 2.53331 3.02441 0.20344 2.88069 35 - -
31588 1.38629 1.38629 1.38629 1.38629
31589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31590 36 2.57915 2.25909 2.64442 0.28946 36 - -
31591 1.38629 1.38629 1.38629 1.38629
31592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31593 37 2.57915 2.25909 2.64442 0.28946 37 - -
31594 1.38629 1.38629 1.38629 1.38629
31595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31596 38 2.57915 2.25909 2.64442 0.28946 38 - -
31597 1.38629 1.38629 1.38629 1.38629
31598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31599 39 0.23862 2.84929 2.43386 2.70756 39 - -
31600 1.38629 1.38629 1.38629 1.38629
31601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31602 40 0.23862 2.84929 2.43386 2.70756 40 - -
31603 1.38629 1.38629 1.38629 1.38629
31604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31605 41 2.53331 3.02441 0.20344 2.88069 41 - -
31606 1.38629 1.38629 1.38629 1.38629
31607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31608 42 2.81865 0.23582 2.88868 2.35662 42 - -
31609 1.38629 1.38629 1.38629 1.38629
31610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31611 43 0.23862 2.84929 2.43386 2.70756 43 - -
31612 1.38629 1.38629 1.38629 1.38629
31613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31614 44 2.57915 2.25909 2.64442 0.28946 44 - -
31615 1.38629 1.38629 1.38629 1.38629
31616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
31617 45 0.23862 2.84929 2.43386 2.70756 45 - -
31618 1.38629 1.38629 1.38629 1.38629
31619 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
31620 //
31621 HMMER3/b [3.0 | March 2010]
31622 NAME 4_LSU_Tracheophyta_4_LSU_start_thirtyfoura_long
31623 LENG 45
31624 ALPH DNA
31625 RF no
31626 CS no
31627 MAP yes
31628 DATE Sun Feb 19 00:23:28 2012
31629 NSEQ 7
31630 EFFN 3.250488
31631 CKSUM 2395428810
31632 STATS LOCAL MSV -8.1586 0.71933
31633 STATS LOCAL VITERBI -7.6661 0.71933
31634 STATS LOCAL FORWARD -4.0423 0.71933
31635 HMM A C G T
31636 m->m m->i m->d i->m i->i d->m d->d
31637 COMPO 1.54794 1.23507 1.18567 1.65570
31638 1.38629 1.38629 1.38629 1.38629
31639 0.03738 3.99829 3.99829 1.46634 0.26236 0.00000 *
31640 1 3.06506 2.58015 3.11411 0.18252 1 - -
31641 1.38629 1.38629 1.38629 1.38629
31642 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31643 2 2.21303 0.60736 1.52252 2.05820 2 - -
31644 1.38629 1.38629 1.38629 1.38629
31645 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31646 3 2.93114 3.56396 0.11980 3.46618 3 - -
31647 1.38629 1.38629 1.38629 1.38629
31648 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31649 4 3.40613 0.13347 3.45673 2.80932 4 - -
31650 1.38629 1.38629 1.38629 1.38629
31651 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31652 5 2.93114 3.56396 0.11980 3.46618 5 - -
31653 1.38629 1.38629 1.38629 1.38629
31654 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31655 6 0.14502 3.35687 2.78670 3.25633 6 - -
31656 1.38629 1.38629 1.38629 1.38629
31657 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31658 7 3.40613 0.13347 3.45673 2.80932 7 - -
31659 1.38629 1.38629 1.38629 1.38629
31660 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31661 8 3.40613 0.13347 3.45673 2.80932 8 - -
31662 1.38629 1.38629 1.38629 1.38629
31663 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31664 9 3.06506 2.58015 3.11411 0.18252 9 - -
31665 1.38629 1.38629 1.38629 1.38629
31666 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31667 10 3.40613 0.13347 3.45673 2.80932 10 - -
31668 1.38629 1.38629 1.38629 1.38629
31669 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31670 11 0.14502 3.35687 2.78670 3.25633 11 - -
31671 1.38629 1.38629 1.38629 1.38629
31672 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31673 12 2.93114 3.56396 0.11980 3.46618 12 - -
31674 1.38629 1.38629 1.38629 1.38629
31675 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31676 13 2.93114 3.56396 0.11980 3.46618 13 - -
31677 1.38629 1.38629 1.38629 1.38629
31678 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31679 14 3.06506 2.58015 3.11411 0.18252 14 - -
31680 1.38629 1.38629 1.38629 1.38629
31681 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31682 15 3.40613 0.13347 3.45673 2.80932 15 - -
31683 1.38629 1.38629 1.38629 1.38629
31684 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31685 16 0.14502 3.35687 2.78670 3.25633 16 - -
31686 1.38629 1.38629 1.38629 1.38629
31687 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31688 17 2.93114 3.56396 0.11980 3.46618 17 - -
31689 1.38629 1.38629 1.38629 1.38629
31690 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31691 18 2.93114 3.56396 0.11980 3.46618 18 - -
31692 1.38629 1.38629 1.38629 1.38629
31693 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31694 19 3.40613 0.13347 3.45673 2.80932 19 - -
31695 1.38629 1.38629 1.38629 1.38629
31696 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31697 20 2.93114 3.56396 0.11980 3.46618 20 - -
31698 1.38629 1.38629 1.38629 1.38629
31699 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31700 21 2.93114 3.56396 0.11980 3.46618 21 - -
31701 1.38629 1.38629 1.38629 1.38629
31702 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31703 22 2.93114 3.56396 0.11980 3.46618 22 - -
31704 1.38629 1.38629 1.38629 1.38629
31705 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31706 23 2.93114 3.56396 0.11980 3.46618 23 - -
31707 1.38629 1.38629 1.38629 1.38629
31708 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31709 24 3.40613 0.13347 3.45673 2.80932 24 - -
31710 1.38629 1.38629 1.38629 1.38629
31711 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31712 25 3.40613 0.13347 3.45673 2.80932 25 - -
31713 1.38629 1.38629 1.38629 1.38629
31714 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31715 26 0.14502 3.35687 2.78670 3.25633 26 - -
31716 1.38629 1.38629 1.38629 1.38629
31717 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31718 27 3.40613 0.13347 3.45673 2.80932 27 - -
31719 1.38629 1.38629 1.38629 1.38629
31720 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31721 28 3.40613 0.13347 3.45673 2.80932 28 - -
31722 1.38629 1.38629 1.38629 1.38629
31723 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31724 29 3.40613 0.13347 3.45673 2.80932 29 - -
31725 1.38629 1.38629 1.38629 1.38629
31726 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31727 30 2.93114 3.56396 0.11980 3.46618 30 - -
31728 1.38629 1.38629 1.38629 1.38629
31729 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31730 31 3.40613 0.13347 3.45673 2.80932 31 - -
31731 1.38629 1.38629 1.38629 1.38629
31732 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31733 32 3.06506 2.58015 3.11411 0.18252 32 - -
31734 1.38629 1.38629 1.38629 1.38629
31735 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31736 33 2.93114 3.56396 0.11980 3.46618 33 - -
31737 1.38629 1.38629 1.38629 1.38629
31738 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31739 34 0.14502 3.35687 2.78670 3.25633 34 - -
31740 1.38629 1.38629 1.38629 1.38629
31741 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31742 35 2.93114 3.56396 0.11980 3.46618 35 - -
31743 1.38629 1.38629 1.38629 1.38629
31744 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31745 36 3.06506 2.58015 3.11411 0.18252 36 - -
31746 1.38629 1.38629 1.38629 1.38629
31747 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31748 37 3.06506 2.58015 3.11411 0.18252 37 - -
31749 1.38629 1.38629 1.38629 1.38629
31750 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31751 38 3.06506 2.58015 3.11411 0.18252 38 - -
31752 1.38629 1.38629 1.38629 1.38629
31753 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31754 39 0.14502 3.35687 2.78670 3.25633 39 - -
31755 1.38629 1.38629 1.38629 1.38629
31756 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31757 40 0.14502 3.35687 2.78670 3.25633 40 - -
31758 1.38629 1.38629 1.38629 1.38629
31759 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31760 41 2.93114 3.56396 0.11980 3.46618 41 - -
31761 1.38629 1.38629 1.38629 1.38629
31762 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31763 42 3.40613 0.13347 3.45673 2.80932 42 - -
31764 1.38629 1.38629 1.38629 1.38629
31765 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31766 43 0.14502 3.35687 2.78670 3.25633 43 - -
31767 1.38629 1.38629 1.38629 1.38629
31768 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31769 44 3.06506 2.58015 3.11411 0.18252 44 - -
31770 1.38629 1.38629 1.38629 1.38629
31771 0.03738 3.99829 3.99829 1.46634 0.26236 1.09861 0.40547
31772 45 0.14502 3.35687 2.78670 3.25633 45 - -
31773 1.38629 1.38629 1.38629 1.38629
31774 0.01887 3.97977 * 1.46634 0.26236 0.00000 *
31775 //
31776 HMMER3/b [3.0 | March 2010]
31777 NAME 4_LSU_Tracheophyta_4_LSU_start_thirtyfourb_long
31778 LENG 45
31779 ALPH DNA
31780 RF no
31781 CS no
31782 MAP yes
31783 DATE Sun Feb 19 00:23:36 2012
31784 NSEQ 10
31785 EFFN 3.217773
31786 CKSUM 2888107526
31787 STATS LOCAL MSV -8.1436 0.71933
31788 STATS LOCAL VITERBI -7.6932 0.71933
31789 STATS LOCAL FORWARD -3.8472 0.71933
31790 HMM A C G T
31791 m->m m->i m->d i->m i->i d->m d->d
31792 COMPO 1.47619 1.20006 1.25414 1.68743
31793 1.38629 1.38629 1.38629 1.38629
31794 0.03761 3.99227 3.99227 1.46634 0.26236 0.00000 *
31795 1 2.51261 1.43333 2.58054 0.50303 1 - -
31796 1.38629 1.38629 1.38629 1.38629
31797 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31798 2 3.39368 0.13501 3.44479 2.80020 2 - -
31799 1.38629 1.38629 1.38629 1.38629
31800 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31801 3 2.92353 3.55295 0.12104 3.45404 3 - -
31802 1.38629 1.38629 1.38629 1.38629
31803 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31804 4 3.39368 0.13501 3.44479 2.80020 4 - -
31805 1.38629 1.38629 1.38629 1.38629
31806 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31807 5 2.92353 3.55295 0.12104 3.45404 5 - -
31808 1.38629 1.38629 1.38629 1.38629
31809 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31810 6 0.14649 3.34608 2.77966 3.24453 6 - -
31811 1.38629 1.38629 1.38629 1.38629
31812 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31813 7 3.39368 0.13501 3.44479 2.80020 7 - -
31814 1.38629 1.38629 1.38629 1.38629
31815 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31816 8 3.39368 0.13501 3.44479 2.80020 8 - -
31817 1.38629 1.38629 1.38629 1.38629
31818 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31819 9 3.39368 0.13501 3.44479 2.80020 9 - -
31820 1.38629 1.38629 1.38629 1.38629
31821 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31822 10 3.39368 0.13501 3.44479 2.80020 10 - -
31823 1.38629 1.38629 1.38629 1.38629
31824 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31825 11 0.14649 3.34608 2.77966 3.24453 11 - -
31826 1.38629 1.38629 1.38629 1.38629
31827 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31828 12 2.92353 3.55295 0.12104 3.45404 12 - -
31829 1.38629 1.38629 1.38629 1.38629
31830 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31831 13 2.92353 3.55295 0.12104 3.45404 13 - -
31832 1.38629 1.38629 1.38629 1.38629
31833 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31834 14 3.05424 2.57325 3.10370 0.18432 14 - -
31835 1.38629 1.38629 1.38629 1.38629
31836 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31837 15 3.39368 0.13501 3.44479 2.80020 15 - -
31838 1.38629 1.38629 1.38629 1.38629
31839 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31840 16 0.14649 3.34608 2.77966 3.24453 16 - -
31841 1.38629 1.38629 1.38629 1.38629
31842 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31843 17 2.92353 3.55295 0.12104 3.45404 17 - -
31844 1.38629 1.38629 1.38629 1.38629
31845 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31846 18 2.92353 3.55295 0.12104 3.45404 18 - -
31847 1.38629 1.38629 1.38629 1.38629
31848 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31849 19 3.39368 0.13501 3.44479 2.80020 19 - -
31850 1.38629 1.38629 1.38629 1.38629
31851 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31852 20 2.92353 3.55295 0.12104 3.45404 20 - -
31853 1.38629 1.38629 1.38629 1.38629
31854 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31855 21 2.92353 3.55295 0.12104 3.45404 21 - -
31856 1.38629 1.38629 1.38629 1.38629
31857 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31858 22 2.92353 3.55295 0.12104 3.45404 22 - -
31859 1.38629 1.38629 1.38629 1.38629
31860 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31861 23 0.14649 3.34608 2.77966 3.24453 23 - -
31862 1.38629 1.38629 1.38629 1.38629
31863 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31864 24 3.39368 0.13501 3.44479 2.80020 24 - -
31865 1.38629 1.38629 1.38629 1.38629
31866 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31867 25 3.05424 2.57325 3.10370 0.18432 25 - -
31868 1.38629 1.38629 1.38629 1.38629
31869 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31870 26 0.14649 3.34608 2.77966 3.24453 26 - -
31871 1.38629 1.38629 1.38629 1.38629
31872 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31873 27 3.39368 0.13501 3.44479 2.80020 27 - -
31874 1.38629 1.38629 1.38629 1.38629
31875 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31876 28 3.39368 0.13501 3.44479 2.80020 28 - -
31877 1.38629 1.38629 1.38629 1.38629
31878 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31879 29 3.39368 0.13501 3.44479 2.80020 29 - -
31880 1.38629 1.38629 1.38629 1.38629
31881 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31882 30 2.92353 3.55295 0.12104 3.45404 30 - -
31883 1.38629 1.38629 1.38629 1.38629
31884 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31885 31 3.39368 0.13501 3.44479 2.80020 31 - -
31886 1.38629 1.38629 1.38629 1.38629
31887 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31888 32 3.05424 2.57325 3.10370 0.18432 32 - -
31889 1.38629 1.38629 1.38629 1.38629
31890 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31891 33 2.92353 3.55295 0.12104 3.45404 33 - -
31892 1.38629 1.38629 1.38629 1.38629
31893 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31894 34 0.14649 3.34608 2.77966 3.24453 34 - -
31895 1.38629 1.38629 1.38629 1.38629
31896 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31897 35 2.92353 3.55295 0.12104 3.45404 35 - -
31898 1.38629 1.38629 1.38629 1.38629
31899 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31900 36 3.05424 2.57325 3.10370 0.18432 36 - -
31901 1.38629 1.38629 1.38629 1.38629
31902 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31903 37 3.05424 2.57325 3.10370 0.18432 37 - -
31904 1.38629 1.38629 1.38629 1.38629
31905 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31906 38 3.05424 2.57325 3.10370 0.18432 38 - -
31907 1.38629 1.38629 1.38629 1.38629
31908 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31909 39 0.14649 3.34608 2.77966 3.24453 39 - -
31910 1.38629 1.38629 1.38629 1.38629
31911 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31912 40 0.14649 3.34608 2.77966 3.24453 40 - -
31913 1.38629 1.38629 1.38629 1.38629
31914 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31915 41 2.92353 3.55295 0.12104 3.45404 41 - -
31916 1.38629 1.38629 1.38629 1.38629
31917 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31918 42 3.39368 0.13501 3.44479 2.80020 42 - -
31919 1.38629 1.38629 1.38629 1.38629
31920 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31921 43 0.14649 3.34608 2.77966 3.24453 43 - -
31922 1.38629 1.38629 1.38629 1.38629
31923 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31924 44 3.05424 2.57325 3.10370 0.18432 44 - -
31925 1.38629 1.38629 1.38629 1.38629
31926 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547
31927 45 0.14649 3.34608 2.77966 3.24453 45 - -
31928 1.38629 1.38629 1.38629 1.38629
31929 0.01898 3.97364 * 1.46634 0.26236 0.00000 *
31930 //
31931 HMMER3/b [3.0 | March 2010]
31932 NAME 4_LSU_Tracheophyta_4_LSU_start_thirtyfourc_long
31933 LENG 45
31934 ALPH DNA
31935 RF no
31936 CS no
31937 MAP yes
31938 DATE Sun Feb 19 00:23:43 2012
31939 NSEQ 3
31940 EFFN 3.000000
31941 CKSUM 1235313167
31942 STATS LOCAL MSV -8.2340 0.71993
31943 STATS LOCAL VITERBI -7.8814 0.71993
31944 STATS LOCAL FORWARD -3.8652 0.71993
31945 HMM A C G T
31946 m->m m->i m->d i->m i->i d->m d->d
31947 COMPO 1.40427 1.27422 1.25518 1.66189
31948 1.38629 1.38629 1.38629 1.38629
31949 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
31950 1 0.15719 3.27118 2.73043 3.16274 1 - -
31951 1.38629 1.38629 1.38629 1.38629
31952 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31953 2 3.30705 0.14631 3.36166 2.73626 2 - -
31954 1.38629 1.38629 1.38629 1.38629
31955 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31956 3 2.86982 3.47591 0.13017 3.36931 3 - -
31957 1.38629 1.38629 1.38629 1.38629
31958 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31959 4 3.30705 0.14631 3.36166 2.73626 4 - -
31960 1.38629 1.38629 1.38629 1.38629
31961 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31962 5 2.86982 3.47591 0.13017 3.36931 5 - -
31963 1.38629 1.38629 1.38629 1.38629
31964 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31965 6 0.15719 3.27118 2.73043 3.16274 6 - -
31966 1.38629 1.38629 1.38629 1.38629
31967 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31968 7 3.30705 0.14631 3.36166 2.73626 7 - -
31969 1.38629 1.38629 1.38629 1.38629
31970 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31971 8 3.30705 0.14631 3.36166 2.73626 8 - -
31972 1.38629 1.38629 1.38629 1.38629
31973 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31974 9 3.30705 0.14631 3.36166 2.73626 9 - -
31975 1.38629 1.38629 1.38629 1.38629
31976 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31977 10 3.30705 0.14631 3.36166 2.73626 10 - -
31978 1.38629 1.38629 1.38629 1.38629
31979 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31980 11 0.15719 3.27118 2.73043 3.16274 11 - -
31981 1.38629 1.38629 1.38629 1.38629
31982 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31983 12 2.86982 3.47591 0.13017 3.36931 12 - -
31984 1.38629 1.38629 1.38629 1.38629
31985 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31986 13 2.86982 3.47591 0.13017 3.36931 13 - -
31987 1.38629 1.38629 1.38629 1.38629
31988 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31989 14 2.97980 2.52563 3.03204 0.19727 14 - -
31990 1.38629 1.38629 1.38629 1.38629
31991 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31992 15 3.30705 0.14631 3.36166 2.73626 15 - -
31993 1.38629 1.38629 1.38629 1.38629
31994 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31995 16 0.15719 3.27118 2.73043 3.16274 16 - -
31996 1.38629 1.38629 1.38629 1.38629
31997 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
31998 17 2.86982 3.47591 0.13017 3.36931 17 - -
31999 1.38629 1.38629 1.38629 1.38629
32000 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32001 18 2.86982 3.47591 0.13017 3.36931 18 - -
32002 1.38629 1.38629 1.38629 1.38629
32003 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32004 19 3.30705 0.14631 3.36166 2.73626 19 - -
32005 1.38629 1.38629 1.38629 1.38629
32006 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32007 20 2.86982 3.47591 0.13017 3.36931 20 - -
32008 1.38629 1.38629 1.38629 1.38629
32009 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32010 21 2.86982 3.47591 0.13017 3.36931 21 - -
32011 1.38629 1.38629 1.38629 1.38629
32012 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32013 22 2.86982 3.47591 0.13017 3.36931 22 - -
32014 1.38629 1.38629 1.38629 1.38629
32015 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32016 23 2.86982 3.47591 0.13017 3.36931 23 - -
32017 1.38629 1.38629 1.38629 1.38629
32018 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32019 24 2.97980 2.52563 3.03204 0.19727 24 - -
32020 1.38629 1.38629 1.38629 1.38629
32021 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32022 25 2.97980 2.52563 3.03204 0.19727 25 - -
32023 1.38629 1.38629 1.38629 1.38629
32024 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32025 26 0.15719 3.27118 2.73043 3.16274 26 - -
32026 1.38629 1.38629 1.38629 1.38629
32027 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32028 27 3.30705 0.14631 3.36166 2.73626 27 - -
32029 1.38629 1.38629 1.38629 1.38629
32030 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32031 28 3.30705 0.14631 3.36166 2.73626 28 - -
32032 1.38629 1.38629 1.38629 1.38629
32033 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32034 29 3.30705 0.14631 3.36166 2.73626 29 - -
32035 1.38629 1.38629 1.38629 1.38629
32036 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32037 30 2.86982 3.47591 0.13017 3.36931 30 - -
32038 1.38629 1.38629 1.38629 1.38629
32039 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32040 31 3.30705 0.14631 3.36166 2.73626 31 - -
32041 1.38629 1.38629 1.38629 1.38629
32042 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32043 32 2.97980 2.52563 3.03204 0.19727 32 - -
32044 1.38629 1.38629 1.38629 1.38629
32045 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32046 33 2.86982 3.47591 0.13017 3.36931 33 - -
32047 1.38629 1.38629 1.38629 1.38629
32048 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32049 34 0.15719 3.27118 2.73043 3.16274 34 - -
32050 1.38629 1.38629 1.38629 1.38629
32051 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32052 35 0.15719 3.27118 2.73043 3.16274 35 - -
32053 1.38629 1.38629 1.38629 1.38629
32054 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32055 36 2.97980 2.52563 3.03204 0.19727 36 - -
32056 1.38629 1.38629 1.38629 1.38629
32057 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32058 37 2.97980 2.52563 3.03204 0.19727 37 - -
32059 1.38629 1.38629 1.38629 1.38629
32060 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32061 38 2.97980 2.52563 3.03204 0.19727 38 - -
32062 1.38629 1.38629 1.38629 1.38629
32063 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32064 39 0.15719 3.27118 2.73043 3.16274 39 - -
32065 1.38629 1.38629 1.38629 1.38629
32066 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32067 40 0.15719 3.27118 2.73043 3.16274 40 - -
32068 1.38629 1.38629 1.38629 1.38629
32069 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32070 41 2.86982 3.47591 0.13017 3.36931 41 - -
32071 1.38629 1.38629 1.38629 1.38629
32072 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32073 42 3.30705 0.14631 3.36166 2.73626 42 - -
32074 1.38629 1.38629 1.38629 1.38629
32075 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32076 43 0.15719 3.27118 2.73043 3.16274 43 - -
32077 1.38629 1.38629 1.38629 1.38629
32078 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32079 44 2.97980 2.52563 3.03204 0.19727 44 - -
32080 1.38629 1.38629 1.38629 1.38629
32081 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32082 45 0.15719 3.27118 2.73043 3.16274 45 - -
32083 1.38629 1.38629 1.38629 1.38629
32084 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
32085 //
32086 HMMER3/b [3.0 | March 2010]
32087 NAME 4_LSU_Tracheophyta_4_LSU_start_three_long
32088 LENG 45
32089 ALPH DNA
32090 RF no
32091 CS no
32092 MAP yes
32093 DATE Sun Feb 19 00:11:10 2012
32094 NSEQ 4
32095 EFFN 3.214844
32096 CKSUM 1201835928
32097 STATS LOCAL MSV -8.1712 0.71933
32098 STATS LOCAL VITERBI -7.7626 0.71933
32099 STATS LOCAL FORWARD -3.7793 0.71933
32100 HMM A C G T
32101 m->m m->i m->d i->m i->i d->m d->d
32102 COMPO 1.47744 1.32559 1.31730 1.43432
32103 1.38629 1.38629 1.38629 1.38629
32104 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 *
32105 1 3.05326 2.57263 3.10276 0.18448 1 - -
32106 1.38629 1.38629 1.38629 1.38629
32107 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32108 2 3.05326 2.57263 3.10276 0.18448 2 - -
32109 1.38629 1.38629 1.38629 1.38629
32110 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32111 3 2.92285 3.55196 0.12115 3.45295 3 - -
32112 1.38629 1.38629 1.38629 1.38629
32113 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32114 4 3.39256 0.13515 3.44371 2.79938 4 - -
32115 1.38629 1.38629 1.38629 1.38629
32116 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32117 5 3.05326 2.57263 3.10276 0.18448 5 - -
32118 1.38629 1.38629 1.38629 1.38629
32119 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32120 6 0.14663 3.34511 2.77903 3.24347 6 - -
32121 1.38629 1.38629 1.38629 1.38629
32122 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32123 7 3.39256 0.13515 3.44371 2.79938 7 - -
32124 1.38629 1.38629 1.38629 1.38629
32125 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32126 8 3.39256 0.13515 3.44371 2.79938 8 - -
32127 1.38629 1.38629 1.38629 1.38629
32128 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32129 9 3.39256 0.13515 3.44371 2.79938 9 - -
32130 1.38629 1.38629 1.38629 1.38629
32131 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32132 10 3.39256 0.13515 3.44371 2.79938 10 - -
32133 1.38629 1.38629 1.38629 1.38629
32134 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32135 11 0.14663 3.34511 2.77903 3.24347 11 - -
32136 1.38629 1.38629 1.38629 1.38629
32137 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32138 12 2.92285 3.55196 0.12115 3.45295 12 - -
32139 1.38629 1.38629 1.38629 1.38629
32140 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32141 13 2.92285 3.55196 0.12115 3.45295 13 - -
32142 1.38629 1.38629 1.38629 1.38629
32143 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32144 14 3.05326 2.57263 3.10276 0.18448 14 - -
32145 1.38629 1.38629 1.38629 1.38629
32146 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32147 15 3.39256 0.13515 3.44371 2.79938 15 - -
32148 1.38629 1.38629 1.38629 1.38629
32149 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32150 16 0.14663 3.34511 2.77903 3.24347 16 - -
32151 1.38629 1.38629 1.38629 1.38629
32152 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32153 17 2.92285 3.55196 0.12115 3.45295 17 - -
32154 1.38629 1.38629 1.38629 1.38629
32155 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32156 18 2.92285 3.55196 0.12115 3.45295 18 - -
32157 1.38629 1.38629 1.38629 1.38629
32158 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32159 19 3.05326 2.57263 3.10276 0.18448 19 - -
32160 1.38629 1.38629 1.38629 1.38629
32161 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32162 20 2.92285 3.55196 0.12115 3.45295 20 - -
32163 1.38629 1.38629 1.38629 1.38629
32164 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32165 21 2.92285 3.55196 0.12115 3.45295 21 - -
32166 1.38629 1.38629 1.38629 1.38629
32167 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32168 22 2.92285 3.55196 0.12115 3.45295 22 - -
32169 1.38629 1.38629 1.38629 1.38629
32170 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32171 23 0.14663 3.34511 2.77903 3.24347 23 - -
32172 1.38629 1.38629 1.38629 1.38629
32173 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32174 24 3.39256 0.13515 3.44371 2.79938 24 - -
32175 1.38629 1.38629 1.38629 1.38629
32176 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32177 25 3.05326 2.57263 3.10276 0.18448 25 - -
32178 1.38629 1.38629 1.38629 1.38629
32179 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32180 26 0.14663 3.34511 2.77903 3.24347 26 - -
32181 1.38629 1.38629 1.38629 1.38629
32182 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32183 27 3.39256 0.13515 3.44371 2.79938 27 - -
32184 1.38629 1.38629 1.38629 1.38629
32185 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32186 28 3.39256 0.13515 3.44371 2.79938 28 - -
32187 1.38629 1.38629 1.38629 1.38629
32188 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32189 29 3.39256 0.13515 3.44371 2.79938 29 - -
32190 1.38629 1.38629 1.38629 1.38629
32191 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32192 30 2.92285 3.55196 0.12115 3.45295 30 - -
32193 1.38629 1.38629 1.38629 1.38629
32194 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32195 31 3.39256 0.13515 3.44371 2.79938 31 - -
32196 1.38629 1.38629 1.38629 1.38629
32197 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32198 32 3.05326 2.57263 3.10276 0.18448 32 - -
32199 1.38629 1.38629 1.38629 1.38629
32200 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32201 33 2.92285 3.55196 0.12115 3.45295 33 - -
32202 1.38629 1.38629 1.38629 1.38629
32203 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32204 34 0.14663 3.34511 2.77903 3.24347 34 - -
32205 1.38629 1.38629 1.38629 1.38629
32206 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32207 35 2.92285 3.55196 0.12115 3.45295 35 - -
32208 1.38629 1.38629 1.38629 1.38629
32209 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32210 36 3.05326 2.57263 3.10276 0.18448 36 - -
32211 1.38629 1.38629 1.38629 1.38629
32212 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32213 37 3.05326 2.57263 3.10276 0.18448 37 - -
32214 1.38629 1.38629 1.38629 1.38629
32215 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32216 38 3.05326 2.57263 3.10276 0.18448 38 - -
32217 1.38629 1.38629 1.38629 1.38629
32218 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32219 39 0.14663 3.34511 2.77903 3.24347 39 - -
32220 1.38629 1.38629 1.38629 1.38629
32221 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32222 40 0.14663 3.34511 2.77903 3.24347 40 - -
32223 1.38629 1.38629 1.38629 1.38629
32224 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32225 41 2.92285 3.55196 0.12115 3.45295 41 - -
32226 1.38629 1.38629 1.38629 1.38629
32227 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32228 42 3.39256 0.13515 3.44371 2.79938 42 - -
32229 1.38629 1.38629 1.38629 1.38629
32230 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32231 43 0.14663 3.34511 2.77903 3.24347 43 - -
32232 1.38629 1.38629 1.38629 1.38629
32233 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32234 44 3.05326 2.57263 3.10276 0.18448 44 - -
32235 1.38629 1.38629 1.38629 1.38629
32236 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547
32237 45 0.14663 3.34511 2.77903 3.24347 45 - -
32238 1.38629 1.38629 1.38629 1.38629
32239 0.01899 3.97309 * 1.46634 0.26236 0.00000 *
32240 //
32241 HMMER3/b [3.0 | March 2010]
32242 NAME 4_LSU_Tracheophyta_4_LSU_start_twelve_long
32243 LENG 45
32244 ALPH DNA
32245 RF no
32246 CS no
32247 MAP yes
32248 DATE Sun Feb 19 00:15:29 2012
32249 NSEQ 2
32250 EFFN 2.000000
32251 CKSUM 1666626583
32252 STATS LOCAL MSV -7.6335 0.72740
32253 STATS LOCAL VITERBI -8.2106 0.72740
32254 STATS LOCAL FORWARD -3.2591 0.72740
32255 HMM A C G T
32256 m->m m->i m->d i->m i->i d->m d->d
32257 COMPO 1.52257 1.35418 1.16326 1.55483
32258 1.38629 1.38629 1.38629 1.38629
32259 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
32260 1 2.53331 3.02441 0.20344 2.88069 1 - -
32261 1.38629 1.38629 1.38629 1.38629
32262 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32263 2 2.57915 2.25909 2.64442 0.28946 2 - -
32264 1.38629 1.38629 1.38629 1.38629
32265 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32266 3 2.53331 3.02441 0.20344 2.88069 3 - -
32267 1.38629 1.38629 1.38629 1.38629
32268 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32269 4 2.81865 0.23582 2.88868 2.35662 4 - -
32270 1.38629 1.38629 1.38629 1.38629
32271 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32272 5 2.53331 3.02441 0.20344 2.88069 5 - -
32273 1.38629 1.38629 1.38629 1.38629
32274 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32275 6 0.23862 2.84929 2.43386 2.70756 6 - -
32276 1.38629 1.38629 1.38629 1.38629
32277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32278 7 2.57915 2.25909 2.64442 0.28946 7 - -
32279 1.38629 1.38629 1.38629 1.38629
32280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32281 8 2.81865 0.23582 2.88868 2.35662 8 - -
32282 1.38629 1.38629 1.38629 1.38629
32283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32284 9 2.81865 0.23582 2.88868 2.35662 9 - -
32285 1.38629 1.38629 1.38629 1.38629
32286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32287 10 2.81865 0.23582 2.88868 2.35662 10 - -
32288 1.38629 1.38629 1.38629 1.38629
32289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32290 11 0.23862 2.84929 2.43386 2.70756 11 - -
32291 1.38629 1.38629 1.38629 1.38629
32292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32293 12 2.53331 3.02441 0.20344 2.88069 12 - -
32294 1.38629 1.38629 1.38629 1.38629
32295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32296 13 2.53331 3.02441 0.20344 2.88069 13 - -
32297 1.38629 1.38629 1.38629 1.38629
32298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32299 14 2.57915 2.25909 2.64442 0.28946 14 - -
32300 1.38629 1.38629 1.38629 1.38629
32301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32302 15 2.81865 0.23582 2.88868 2.35662 15 - -
32303 1.38629 1.38629 1.38629 1.38629
32304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32305 16 0.23862 2.84929 2.43386 2.70756 16 - -
32306 1.38629 1.38629 1.38629 1.38629
32307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32308 17 2.53331 3.02441 0.20344 2.88069 17 - -
32309 1.38629 1.38629 1.38629 1.38629
32310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32311 18 2.53331 3.02441 0.20344 2.88069 18 - -
32312 1.38629 1.38629 1.38629 1.38629
32313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32314 19 2.81865 0.23582 2.88868 2.35662 19 - -
32315 1.38629 1.38629 1.38629 1.38629
32316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32317 20 2.53331 3.02441 0.20344 2.88069 20 - -
32318 1.38629 1.38629 1.38629 1.38629
32319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32320 21 2.53331 3.02441 0.20344 2.88069 21 - -
32321 1.38629 1.38629 1.38629 1.38629
32322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32323 22 2.53331 3.02441 0.20344 2.88069 22 - -
32324 1.38629 1.38629 1.38629 1.38629
32325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32326 23 2.53331 3.02441 0.20344 2.88069 23 - -
32327 1.38629 1.38629 1.38629 1.38629
32328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32329 24 2.81865 0.23582 2.88868 2.35662 24 - -
32330 1.38629 1.38629 1.38629 1.38629
32331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32332 25 2.57915 2.25909 2.64442 0.28946 25 - -
32333 1.38629 1.38629 1.38629 1.38629
32334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32335 26 0.23862 2.84929 2.43386 2.70756 26 - -
32336 1.38629 1.38629 1.38629 1.38629
32337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32338 27 2.81865 0.23582 2.88868 2.35662 27 - -
32339 1.38629 1.38629 1.38629 1.38629
32340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32341 28 2.81865 0.23582 2.88868 2.35662 28 - -
32342 1.38629 1.38629 1.38629 1.38629
32343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32344 29 2.81865 0.23582 2.88868 2.35662 29 - -
32345 1.38629 1.38629 1.38629 1.38629
32346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32347 30 2.53331 3.02441 0.20344 2.88069 30 - -
32348 1.38629 1.38629 1.38629 1.38629
32349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32350 31 2.81865 0.23582 2.88868 2.35662 31 - -
32351 1.38629 1.38629 1.38629 1.38629
32352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32353 32 2.57915 2.25909 2.64442 0.28946 32 - -
32354 1.38629 1.38629 1.38629 1.38629
32355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32356 33 2.53331 3.02441 0.20344 2.88069 33 - -
32357 1.38629 1.38629 1.38629 1.38629
32358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32359 34 0.23862 2.84929 2.43386 2.70756 34 - -
32360 1.38629 1.38629 1.38629 1.38629
32361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32362 35 2.53331 3.02441 0.20344 2.88069 35 - -
32363 1.38629 1.38629 1.38629 1.38629
32364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32365 36 2.57915 2.25909 2.64442 0.28946 36 - -
32366 1.38629 1.38629 1.38629 1.38629
32367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32368 37 2.57915 2.25909 2.64442 0.28946 37 - -
32369 1.38629 1.38629 1.38629 1.38629
32370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32371 38 2.57915 2.25909 2.64442 0.28946 38 - -
32372 1.38629 1.38629 1.38629 1.38629
32373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32374 39 0.23862 2.84929 2.43386 2.70756 39 - -
32375 1.38629 1.38629 1.38629 1.38629
32376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32377 40 0.23862 2.84929 2.43386 2.70756 40 - -
32378 1.38629 1.38629 1.38629 1.38629
32379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32380 41 2.53331 3.02441 0.20344 2.88069 41 - -
32381 1.38629 1.38629 1.38629 1.38629
32382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32383 42 2.81865 0.23582 2.88868 2.35662 42 - -
32384 1.38629 1.38629 1.38629 1.38629
32385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32386 43 0.23862 2.84929 2.43386 2.70756 43 - -
32387 1.38629 1.38629 1.38629 1.38629
32388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32389 44 2.57915 2.25909 2.64442 0.28946 44 - -
32390 1.38629 1.38629 1.38629 1.38629
32391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32392 45 0.23862 2.84929 2.43386 2.70756 45 - -
32393 1.38629 1.38629 1.38629 1.38629
32394 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
32395 //
32396 HMMER3/b [3.0 | March 2010]
32397 NAME 4_LSU_Tracheophyta_4_LSU_start_twenty_long
32398 LENG 45
32399 ALPH DNA
32400 RF no
32401 CS no
32402 MAP yes
32403 DATE Sun Feb 19 00:21:12 2012
32404 NSEQ 3
32405 EFFN 3.000000
32406 CKSUM 458537765
32407 STATS LOCAL MSV -8.1436 0.72004
32408 STATS LOCAL VITERBI -7.6198 0.72004
32409 STATS LOCAL FORWARD -4.1137 0.72004
32410 HMM A C G T
32411 m->m m->i m->d i->m i->i d->m d->d
32412 COMPO 1.40407 1.27131 1.31647 1.58055
32413 1.38629 1.38629 1.38629 1.38629
32414 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
32415 1 0.15719 3.27118 2.73043 3.16274 1 - -
32416 1.38629 1.38629 1.38629 1.38629
32417 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32418 2 3.30705 0.14631 3.36166 2.73626 2 - -
32419 1.38629 1.38629 1.38629 1.38629
32420 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32421 3 2.86982 3.47591 0.13017 3.36931 3 - -
32422 1.38629 1.38629 1.38629 1.38629
32423 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32424 4 0.15719 3.27118 2.73043 3.16274 4 - -
32425 1.38629 1.38629 1.38629 1.38629
32426 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32427 5 2.86982 3.47591 0.13017 3.36931 5 - -
32428 1.38629 1.38629 1.38629 1.38629
32429 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32430 6 0.15719 3.27118 2.73043 3.16274 6 - -
32431 1.38629 1.38629 1.38629 1.38629
32432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32433 7 3.30705 0.14631 3.36166 2.73626 7 - -
32434 1.38629 1.38629 1.38629 1.38629
32435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32436 8 3.30705 0.14631 3.36166 2.73626 8 - -
32437 1.38629 1.38629 1.38629 1.38629
32438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32439 9 2.97980 2.52563 3.03204 0.19727 9 - -
32440 1.38629 1.38629 1.38629 1.38629
32441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32442 10 3.30705 0.14631 3.36166 2.73626 10 - -
32443 1.38629 1.38629 1.38629 1.38629
32444 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32445 11 0.15719 3.27118 2.73043 3.16274 11 - -
32446 1.38629 1.38629 1.38629 1.38629
32447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32448 12 2.86982 3.47591 0.13017 3.36931 12 - -
32449 1.38629 1.38629 1.38629 1.38629
32450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32451 13 2.97980 2.52563 3.03204 0.19727 13 - -
32452 1.38629 1.38629 1.38629 1.38629
32453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32454 14 3.30705 0.14631 3.36166 2.73626 14 - -
32455 1.38629 1.38629 1.38629 1.38629
32456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32457 15 0.15719 3.27118 2.73043 3.16274 15 - -
32458 1.38629 1.38629 1.38629 1.38629
32459 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32460 16 2.86982 3.47591 0.13017 3.36931 16 - -
32461 1.38629 1.38629 1.38629 1.38629
32462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32463 17 3.30705 0.14631 3.36166 2.73626 17 - -
32464 1.38629 1.38629 1.38629 1.38629
32465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32466 18 2.86982 3.47591 0.13017 3.36931 18 - -
32467 1.38629 1.38629 1.38629 1.38629
32468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32469 19 2.86982 3.47591 0.13017 3.36931 19 - -
32470 1.38629 1.38629 1.38629 1.38629
32471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32472 20 2.86982 3.47591 0.13017 3.36931 20 - -
32473 1.38629 1.38629 1.38629 1.38629
32474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32475 21 2.86982 3.47591 0.13017 3.36931 21 - -
32476 1.38629 1.38629 1.38629 1.38629
32477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32478 22 3.30705 0.14631 3.36166 2.73626 22 - -
32479 1.38629 1.38629 1.38629 1.38629
32480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32481 23 2.97980 2.52563 3.03204 0.19727 23 - -
32482 1.38629 1.38629 1.38629 1.38629
32483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32484 24 0.15719 3.27118 2.73043 3.16274 24 - -
32485 1.38629 1.38629 1.38629 1.38629
32486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32487 25 3.30705 0.14631 3.36166 2.73626 25 - -
32488 1.38629 1.38629 1.38629 1.38629
32489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32490 26 3.30705 0.14631 3.36166 2.73626 26 - -
32491 1.38629 1.38629 1.38629 1.38629
32492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32493 27 3.30705 0.14631 3.36166 2.73626 27 - -
32494 1.38629 1.38629 1.38629 1.38629
32495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32496 28 2.86982 3.47591 0.13017 3.36931 28 - -
32497 1.38629 1.38629 1.38629 1.38629
32498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32499 29 3.30705 0.14631 3.36166 2.73626 29 - -
32500 1.38629 1.38629 1.38629 1.38629
32501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32502 30 2.97980 2.52563 3.03204 0.19727 30 - -
32503 1.38629 1.38629 1.38629 1.38629
32504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32505 31 2.86982 3.47591 0.13017 3.36931 31 - -
32506 1.38629 1.38629 1.38629 1.38629
32507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32508 32 0.15719 3.27118 2.73043 3.16274 32 - -
32509 1.38629 1.38629 1.38629 1.38629
32510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32511 33 2.86982 3.47591 0.13017 3.36931 33 - -
32512 1.38629 1.38629 1.38629 1.38629
32513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32514 34 2.97980 2.52563 3.03204 0.19727 34 - -
32515 1.38629 1.38629 1.38629 1.38629
32516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32517 35 2.97980 2.52563 3.03204 0.19727 35 - -
32518 1.38629 1.38629 1.38629 1.38629
32519 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32520 36 2.97980 2.52563 3.03204 0.19727 36 - -
32521 1.38629 1.38629 1.38629 1.38629
32522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32523 37 0.15719 3.27118 2.73043 3.16274 37 - -
32524 1.38629 1.38629 1.38629 1.38629
32525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32526 38 0.15719 3.27118 2.73043 3.16274 38 - -
32527 1.38629 1.38629 1.38629 1.38629
32528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32529 39 2.86982 3.47591 0.13017 3.36931 39 - -
32530 1.38629 1.38629 1.38629 1.38629
32531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32532 40 3.30705 0.14631 3.36166 2.73626 40 - -
32533 1.38629 1.38629 1.38629 1.38629
32534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32535 41 0.15719 3.27118 2.73043 3.16274 41 - -
32536 1.38629 1.38629 1.38629 1.38629
32537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32538 42 2.97980 2.52563 3.03204 0.19727 42 - -
32539 1.38629 1.38629 1.38629 1.38629
32540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32541 43 0.15719 3.27118 2.73043 3.16274 43 - -
32542 1.38629 1.38629 1.38629 1.38629
32543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32544 44 2.97980 2.52563 3.03204 0.19727 44 - -
32545 1.38629 1.38629 1.38629 1.38629
32546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
32547 45 3.30705 0.14631 3.36166 2.73626 45 - -
32548 1.38629 1.38629 1.38629 1.38629
32549 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
32550 //
32551 HMMER3/b [3.0 | March 2010]
32552 NAME 4_LSU_Tracheophyta_4_LSU_start_twentyeight_long
32553 LENG 45
32554 ALPH DNA
32555 RF no
32556 CS no
32557 MAP yes
32558 DATE Sun Feb 19 00:23:03 2012
32559 NSEQ 4
32560 EFFN 3.097656
32561 CKSUM 2353773636
32562 STATS LOCAL MSV -8.2199 0.71933
32563 STATS LOCAL VITERBI -7.8312 0.71933
32564 STATS LOCAL FORWARD -3.6832 0.71933
32565 HMM A C G T
32566 m->m m->i m->d i->m i->i d->m d->d
32567 COMPO 1.40516 1.22130 1.19741 1.84611
32568 1.38629 1.38629 1.38629 1.38629
32569 0.03848 3.96985 3.96985 1.46634 0.26236 0.00000 *
32570 1 0.15219 3.30544 2.75304 3.20013 1 - -
32571 1.38629 1.38629 1.38629 1.38629
32572 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32573 2 3.01370 2.54736 3.06469 0.19124 2 - -
32574 1.38629 1.38629 1.38629 1.38629
32575 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32576 3 2.89459 3.51128 0.12588 3.40817 3 - -
32577 1.38629 1.38629 1.38629 1.38629
32578 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32579 4 3.34671 0.14101 3.39974 2.76565 4 - -
32580 1.38629 1.38629 1.38629 1.38629
32581 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32582 5 2.89459 3.51128 0.12588 3.40817 5 - -
32583 1.38629 1.38629 1.38629 1.38629
32584 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32585 6 0.15219 3.30544 2.75304 3.20013 6 - -
32586 1.38629 1.38629 1.38629 1.38629
32587 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32588 7 3.34671 0.14101 3.39974 2.76565 7 - -
32589 1.38629 1.38629 1.38629 1.38629
32590 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32591 8 3.34671 0.14101 3.39974 2.76565 8 - -
32592 1.38629 1.38629 1.38629 1.38629
32593 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32594 9 3.34671 0.14101 3.39974 2.76565 9 - -
32595 1.38629 1.38629 1.38629 1.38629
32596 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32597 10 3.34671 0.14101 3.39974 2.76565 10 - -
32598 1.38629 1.38629 1.38629 1.38629
32599 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32600 11 0.15219 3.30544 2.75304 3.20013 11 - -
32601 1.38629 1.38629 1.38629 1.38629
32602 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32603 12 2.89459 3.51128 0.12588 3.40817 12 - -
32604 1.38629 1.38629 1.38629 1.38629
32605 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32606 13 2.89459 3.51128 0.12588 3.40817 13 - -
32607 1.38629 1.38629 1.38629 1.38629
32608 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32609 14 0.15219 3.30544 2.75304 3.20013 14 - -
32610 1.38629 1.38629 1.38629 1.38629
32611 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32612 15 3.01370 2.54736 3.06469 0.19124 15 - -
32613 1.38629 1.38629 1.38629 1.38629
32614 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32615 16 2.89459 3.51128 0.12588 3.40817 16 - -
32616 1.38629 1.38629 1.38629 1.38629
32617 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32618 17 2.89459 3.51128 0.12588 3.40817 17 - -
32619 1.38629 1.38629 1.38629 1.38629
32620 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32621 18 2.89459 3.51128 0.12588 3.40817 18 - -
32622 1.38629 1.38629 1.38629 1.38629
32623 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32624 19 3.34671 0.14101 3.39974 2.76565 19 - -
32625 1.38629 1.38629 1.38629 1.38629
32626 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32627 20 2.89459 3.51128 0.12588 3.40817 20 - -
32628 1.38629 1.38629 1.38629 1.38629
32629 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32630 21 0.15219 3.30544 2.75304 3.20013 21 - -
32631 1.38629 1.38629 1.38629 1.38629
32632 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32633 22 2.89459 3.51128 0.12588 3.40817 22 - -
32634 1.38629 1.38629 1.38629 1.38629
32635 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32636 23 2.89459 3.51128 0.12588 3.40817 23 - -
32637 1.38629 1.38629 1.38629 1.38629
32638 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32639 24 3.34671 0.14101 3.39974 2.76565 24 - -
32640 1.38629 1.38629 1.38629 1.38629
32641 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32642 25 3.34671 0.14101 3.39974 2.76565 25 - -
32643 1.38629 1.38629 1.38629 1.38629
32644 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32645 26 0.15219 3.30544 2.75304 3.20013 26 - -
32646 1.38629 1.38629 1.38629 1.38629
32647 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32648 27 3.34671 0.14101 3.39974 2.76565 27 - -
32649 1.38629 1.38629 1.38629 1.38629
32650 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32651 28 3.34671 0.14101 3.39974 2.76565 28 - -
32652 1.38629 1.38629 1.38629 1.38629
32653 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32654 29 3.34671 0.14101 3.39974 2.76565 29 - -
32655 1.38629 1.38629 1.38629 1.38629
32656 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32657 30 2.89459 3.51128 0.12588 3.40817 30 - -
32658 1.38629 1.38629 1.38629 1.38629
32659 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32660 31 3.34671 0.14101 3.39974 2.76565 31 - -
32661 1.38629 1.38629 1.38629 1.38629
32662 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32663 32 3.34671 0.14101 3.39974 2.76565 32 - -
32664 1.38629 1.38629 1.38629 1.38629
32665 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32666 33 2.89459 3.51128 0.12588 3.40817 33 - -
32667 1.38629 1.38629 1.38629 1.38629
32668 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32669 34 0.15219 3.30544 2.75304 3.20013 34 - -
32670 1.38629 1.38629 1.38629 1.38629
32671 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32672 35 2.89459 3.51128 0.12588 3.40817 35 - -
32673 1.38629 1.38629 1.38629 1.38629
32674 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32675 36 3.01370 2.54736 3.06469 0.19124 36 - -
32676 1.38629 1.38629 1.38629 1.38629
32677 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32678 37 3.01370 2.54736 3.06469 0.19124 37 - -
32679 1.38629 1.38629 1.38629 1.38629
32680 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32681 38 3.01370 2.54736 3.06469 0.19124 38 - -
32682 1.38629 1.38629 1.38629 1.38629
32683 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32684 39 0.15219 3.30544 2.75304 3.20013 39 - -
32685 1.38629 1.38629 1.38629 1.38629
32686 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32687 40 0.15219 3.30544 2.75304 3.20013 40 - -
32688 1.38629 1.38629 1.38629 1.38629
32689 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32690 41 2.89459 3.51128 0.12588 3.40817 41 - -
32691 1.38629 1.38629 1.38629 1.38629
32692 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32693 42 3.34671 0.14101 3.39974 2.76565 42 - -
32694 1.38629 1.38629 1.38629 1.38629
32695 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32696 43 0.15219 3.30544 2.75304 3.20013 43 - -
32697 1.38629 1.38629 1.38629 1.38629
32698 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32699 44 3.01370 2.54736 3.06469 0.19124 44 - -
32700 1.38629 1.38629 1.38629 1.38629
32701 0.03848 3.96985 3.96985 1.46634 0.26236 1.09861 0.40547
32702 45 0.15219 3.30544 2.75304 3.20013 45 - -
32703 1.38629 1.38629 1.38629 1.38629
32704 0.01943 3.95079 * 1.46634 0.26236 0.00000 *
32705 //
32706 HMMER3/b [3.0 | March 2010]
32707 NAME 4_LSU_Tracheophyta_4_LSU_start_twentyfive_long
32708 LENG 45
32709 ALPH DNA
32710 RF no
32711 CS no
32712 MAP yes
32713 DATE Sun Feb 19 00:22:33 2012
32714 NSEQ 6
32715 EFFN 3.284180
32716 CKSUM 3558168622
32717 STATS LOCAL MSV -8.0853 0.71933
32718 STATS LOCAL VITERBI -7.5841 0.71933
32719 STATS LOCAL FORWARD -3.7451 0.71933
32720 HMM A C G T
32721 m->m m->i m->d i->m i->i d->m d->d
32722 COMPO 1.28014 1.32058 1.61205 1.36437
32723 1.38629 1.38629 1.38629 1.38629
32724 0.03715 4.00445 4.00445 1.46634 0.26236 0.00000 *
32725 1 3.07610 2.58718 3.12474 0.18071 1 - -
32726 1.38629 1.38629 1.38629 1.38629
32727 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32728 2 3.07610 2.58718 3.12474 0.18071 2 - -
32729 1.38629 1.38629 1.38629 1.38629
32730 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32731 3 3.07610 2.58718 3.12474 0.18071 3 - -
32732 1.38629 1.38629 1.38629 1.38629
32733 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32734 4 3.07610 2.58718 3.12474 0.18071 4 - -
32735 1.38629 1.38629 1.38629 1.38629
32736 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32737 5 2.93885 3.57515 0.11855 3.47852 5 - -
32738 1.38629 1.38629 1.38629 1.38629
32739 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32740 6 0.14354 3.36786 2.79386 3.26835 6 - -
32741 1.38629 1.38629 1.38629 1.38629
32742 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32743 7 3.41881 0.13193 3.46887 2.81857 7 - -
32744 1.38629 1.38629 1.38629 1.38629
32745 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32746 8 3.41881 0.13193 3.46887 2.81857 8 - -
32747 1.38629 1.38629 1.38629 1.38629
32748 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32749 9 3.07610 2.58718 3.12474 0.18071 9 - -
32750 1.38629 1.38629 1.38629 1.38629
32751 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32752 10 3.41881 0.13193 3.46887 2.81857 10 - -
32753 1.38629 1.38629 1.38629 1.38629
32754 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32755 11 0.14354 3.36786 2.79386 3.26835 11 - -
32756 1.38629 1.38629 1.38629 1.38629
32757 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32758 12 2.93885 3.57515 0.11855 3.47852 12 - -
32759 1.38629 1.38629 1.38629 1.38629
32760 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32761 13 3.07610 2.58718 3.12474 0.18071 13 - -
32762 1.38629 1.38629 1.38629 1.38629
32763 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32764 14 3.07610 2.58718 3.12474 0.18071 14 - -
32765 1.38629 1.38629 1.38629 1.38629
32766 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32767 15 3.41881 0.13193 3.46887 2.81857 15 - -
32768 1.38629 1.38629 1.38629 1.38629
32769 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32770 16 0.14354 3.36786 2.79386 3.26835 16 - -
32771 1.38629 1.38629 1.38629 1.38629
32772 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32773 17 2.93885 3.57515 0.11855 3.47852 17 - -
32774 1.38629 1.38629 1.38629 1.38629
32775 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32776 18 0.14354 3.36786 2.79386 3.26835 18 - -
32777 1.38629 1.38629 1.38629 1.38629
32778 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32779 19 3.41881 0.13193 3.46887 2.81857 19 - -
32780 1.38629 1.38629 1.38629 1.38629
32781 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32782 20 0.14354 3.36786 2.79386 3.26835 20 - -
32783 1.38629 1.38629 1.38629 1.38629
32784 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32785 21 0.14354 3.36786 2.79386 3.26835 21 - -
32786 1.38629 1.38629 1.38629 1.38629
32787 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32788 22 2.93885 3.57515 0.11855 3.47852 22 - -
32789 1.38629 1.38629 1.38629 1.38629
32790 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32791 23 2.93885 3.57515 0.11855 3.47852 23 - -
32792 1.38629 1.38629 1.38629 1.38629
32793 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32794 24 3.41881 0.13193 3.46887 2.81857 24 - -
32795 1.38629 1.38629 1.38629 1.38629
32796 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32797 25 3.07610 2.58718 3.12474 0.18071 25 - -
32798 1.38629 1.38629 1.38629 1.38629
32799 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32800 26 0.14354 3.36786 2.79386 3.26835 26 - -
32801 1.38629 1.38629 1.38629 1.38629
32802 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32803 27 3.41881 0.13193 3.46887 2.81857 27 - -
32804 1.38629 1.38629 1.38629 1.38629
32805 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32806 28 3.41881 0.13193 3.46887 2.81857 28 - -
32807 1.38629 1.38629 1.38629 1.38629
32808 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32809 29 3.41881 0.13193 3.46887 2.81857 29 - -
32810 1.38629 1.38629 1.38629 1.38629
32811 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32812 30 2.93885 3.57515 0.11855 3.47852 30 - -
32813 1.38629 1.38629 1.38629 1.38629
32814 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32815 31 3.41881 0.13193 3.46887 2.81857 31 - -
32816 1.38629 1.38629 1.38629 1.38629
32817 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32818 32 3.41881 0.13193 3.46887 2.81857 32 - -
32819 1.38629 1.38629 1.38629 1.38629
32820 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32821 33 2.93885 3.57515 0.11855 3.47852 33 - -
32822 1.38629 1.38629 1.38629 1.38629
32823 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32824 34 0.14354 3.36786 2.79386 3.26835 34 - -
32825 1.38629 1.38629 1.38629 1.38629
32826 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32827 35 0.14354 3.36786 2.79386 3.26835 35 - -
32828 1.38629 1.38629 1.38629 1.38629
32829 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32830 36 3.07610 2.58718 3.12474 0.18071 36 - -
32831 1.38629 1.38629 1.38629 1.38629
32832 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32833 37 3.07610 2.58718 3.12474 0.18071 37 - -
32834 1.38629 1.38629 1.38629 1.38629
32835 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32836 38 3.07610 2.58718 3.12474 0.18071 38 - -
32837 1.38629 1.38629 1.38629 1.38629
32838 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32839 39 0.14354 3.36786 2.79386 3.26835 39 - -
32840 1.38629 1.38629 1.38629 1.38629
32841 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32842 40 0.14354 3.36786 2.79386 3.26835 40 - -
32843 1.38629 1.38629 1.38629 1.38629
32844 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32845 41 2.93885 3.57515 0.11855 3.47852 41 - -
32846 1.38629 1.38629 1.38629 1.38629
32847 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32848 42 3.41881 0.13193 3.46887 2.81857 42 - -
32849 1.38629 1.38629 1.38629 1.38629
32850 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32851 43 0.14354 3.36786 2.79386 3.26835 43 - -
32852 1.38629 1.38629 1.38629 1.38629
32853 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32854 44 3.07610 2.58718 3.12474 0.18071 44 - -
32855 1.38629 1.38629 1.38629 1.38629
32856 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547
32857 45 0.14354 3.36786 2.79386 3.26835 45 - -
32858 1.38629 1.38629 1.38629 1.38629
32859 0.01875 3.98605 * 1.46634 0.26236 0.00000 *
32860 //
32861 HMMER3/b [3.0 | March 2010]
32862 NAME 4_LSU_Tracheophyta_4_LSU_start_twentyfour_long
32863 LENG 45
32864 ALPH DNA
32865 RF no
32866 CS no
32867 MAP yes
32868 DATE Sun Feb 19 00:22:20 2012
32869 NSEQ 2
32870 EFFN 2.000000
32871 CKSUM 585099399
32872 STATS LOCAL MSV -7.5304 0.72797
32873 STATS LOCAL VITERBI -8.2378 0.72797
32874 STATS LOCAL FORWARD -3.2800 0.72797
32875 HMM A C G T
32876 m->m m->i m->d i->m i->i d->m d->d
32877 COMPO 1.34335 1.39907 1.37294 1.43195
32878 1.38629 1.38629 1.38629 1.38629
32879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
32880 1 2.81865 0.23582 2.88868 2.35662 1 - -
32881 1.38629 1.38629 1.38629 1.38629
32882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32883 2 2.57915 2.25909 2.64442 0.28946 2 - -
32884 1.38629 1.38629 1.38629 1.38629
32885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32886 3 2.53331 3.02441 0.20344 2.88069 3 - -
32887 1.38629 1.38629 1.38629 1.38629
32888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32889 4 2.81865 0.23582 2.88868 2.35662 4 - -
32890 1.38629 1.38629 1.38629 1.38629
32891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32892 5 2.53331 3.02441 0.20344 2.88069 5 - -
32893 1.38629 1.38629 1.38629 1.38629
32894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32895 6 0.23862 2.84929 2.43386 2.70756 6 - -
32896 1.38629 1.38629 1.38629 1.38629
32897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32898 7 2.81865 0.23582 2.88868 2.35662 7 - -
32899 1.38629 1.38629 1.38629 1.38629
32900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32901 8 2.81865 0.23582 2.88868 2.35662 8 - -
32902 1.38629 1.38629 1.38629 1.38629
32903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32904 9 2.81865 0.23582 2.88868 2.35662 9 - -
32905 1.38629 1.38629 1.38629 1.38629
32906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32907 10 2.81865 0.23582 2.88868 2.35662 10 - -
32908 1.38629 1.38629 1.38629 1.38629
32909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32910 11 0.23862 2.84929 2.43386 2.70756 11 - -
32911 1.38629 1.38629 1.38629 1.38629
32912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32913 12 2.53331 3.02441 0.20344 2.88069 12 - -
32914 1.38629 1.38629 1.38629 1.38629
32915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32916 13 2.53331 3.02441 0.20344 2.88069 13 - -
32917 1.38629 1.38629 1.38629 1.38629
32918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32919 14 2.57915 2.25909 2.64442 0.28946 14 - -
32920 1.38629 1.38629 1.38629 1.38629
32921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32922 15 2.57915 2.25909 2.64442 0.28946 15 - -
32923 1.38629 1.38629 1.38629 1.38629
32924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32925 16 0.23862 2.84929 2.43386 2.70756 16 - -
32926 1.38629 1.38629 1.38629 1.38629
32927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32928 17 2.53331 3.02441 0.20344 2.88069 17 - -
32929 1.38629 1.38629 1.38629 1.38629
32930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32931 18 2.53331 3.02441 0.20344 2.88069 18 - -
32932 1.38629 1.38629 1.38629 1.38629
32933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32934 19 2.81865 0.23582 2.88868 2.35662 19 - -
32935 1.38629 1.38629 1.38629 1.38629
32936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32937 20 2.53331 3.02441 0.20344 2.88069 20 - -
32938 1.38629 1.38629 1.38629 1.38629
32939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32940 21 0.23862 2.84929 2.43386 2.70756 21 - -
32941 1.38629 1.38629 1.38629 1.38629
32942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32943 22 2.53331 3.02441 0.20344 2.88069 22 - -
32944 1.38629 1.38629 1.38629 1.38629
32945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32946 23 0.23862 2.84929 2.43386 2.70756 23 - -
32947 1.38629 1.38629 1.38629 1.38629
32948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32949 24 2.57915 2.25909 2.64442 0.28946 24 - -
32950 1.38629 1.38629 1.38629 1.38629
32951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32952 25 2.57915 2.25909 2.64442 0.28946 25 - -
32953 1.38629 1.38629 1.38629 1.38629
32954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32955 26 0.23862 2.84929 2.43386 2.70756 26 - -
32956 1.38629 1.38629 1.38629 1.38629
32957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32958 27 2.81865 0.23582 2.88868 2.35662 27 - -
32959 1.38629 1.38629 1.38629 1.38629
32960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32961 28 2.81865 0.23582 2.88868 2.35662 28 - -
32962 1.38629 1.38629 1.38629 1.38629
32963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32964 29 2.81865 0.23582 2.88868 2.35662 29 - -
32965 1.38629 1.38629 1.38629 1.38629
32966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32967 30 0.23862 2.84929 2.43386 2.70756 30 - -
32968 1.38629 1.38629 1.38629 1.38629
32969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32970 31 2.57915 2.25909 2.64442 0.28946 31 - -
32971 1.38629 1.38629 1.38629 1.38629
32972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32973 32 2.57915 2.25909 2.64442 0.28946 32 - -
32974 1.38629 1.38629 1.38629 1.38629
32975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32976 33 2.53331 3.02441 0.20344 2.88069 33 - -
32977 1.38629 1.38629 1.38629 1.38629
32978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32979 34 0.23862 2.84929 2.43386 2.70756 34 - -
32980 1.38629 1.38629 1.38629 1.38629
32981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32982 35 2.53331 3.02441 0.20344 2.88069 35 - -
32983 1.38629 1.38629 1.38629 1.38629
32984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32985 36 2.57915 2.25909 2.64442 0.28946 36 - -
32986 1.38629 1.38629 1.38629 1.38629
32987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32988 37 2.57915 2.25909 2.64442 0.28946 37 - -
32989 1.38629 1.38629 1.38629 1.38629
32990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32991 38 2.57915 2.25909 2.64442 0.28946 38 - -
32992 1.38629 1.38629 1.38629 1.38629
32993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32994 39 0.23862 2.84929 2.43386 2.70756 39 - -
32995 1.38629 1.38629 1.38629 1.38629
32996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
32997 40 0.23862 2.84929 2.43386 2.70756 40 - -
32998 1.38629 1.38629 1.38629 1.38629
32999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33000 41 2.53331 3.02441 0.20344 2.88069 41 - -
33001 1.38629 1.38629 1.38629 1.38629
33002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33003 42 2.81865 0.23582 2.88868 2.35662 42 - -
33004 1.38629 1.38629 1.38629 1.38629
33005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33006 43 0.23862 2.84929 2.43386 2.70756 43 - -
33007 1.38629 1.38629 1.38629 1.38629
33008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33009 44 2.57915 2.25909 2.64442 0.28946 44 - -
33010 1.38629 1.38629 1.38629 1.38629
33011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33012 45 0.23862 2.84929 2.43386 2.70756 45 - -
33013 1.38629 1.38629 1.38629 1.38629
33014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
33015 //
33016 HMMER3/b [3.0 | March 2010]
33017 NAME 4_LSU_Tracheophyta_4_LSU_start_twentynine_long
33018 LENG 45
33019 ALPH DNA
33020 RF no
33021 CS no
33022 MAP yes
33023 DATE Sun Feb 19 00:23:14 2012
33024 NSEQ 2
33025 EFFN 2.000000
33026 CKSUM 948472287
33027 STATS LOCAL MSV -7.5165 0.72789
33028 STATS LOCAL VITERBI -8.3237 0.72789
33029 STATS LOCAL FORWARD -3.1789 0.72789
33030 HMM A C G T
33031 m->m m->i m->d i->m i->i d->m d->d
33032 COMPO 1.31998 1.30160 1.25870 1.73307
33033 1.38629 1.38629 1.38629 1.38629
33034 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
33035 1 0.23862 2.84929 2.43386 2.70756 1 - -
33036 1.38629 1.38629 1.38629 1.38629
33037 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33038 2 0.23862 2.84929 2.43386 2.70756 2 - -
33039 1.38629 1.38629 1.38629 1.38629
33040 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33041 3 2.53331 3.02441 0.20344 2.88069 3 - -
33042 1.38629 1.38629 1.38629 1.38629
33043 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33044 4 2.81865 0.23582 2.88868 2.35662 4 - -
33045 1.38629 1.38629 1.38629 1.38629
33046 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33047 5 2.53331 3.02441 0.20344 2.88069 5 - -
33048 1.38629 1.38629 1.38629 1.38629
33049 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33050 6 0.23862 2.84929 2.43386 2.70756 6 - -
33051 1.38629 1.38629 1.38629 1.38629
33052 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33053 7 2.81865 0.23582 2.88868 2.35662 7 - -
33054 1.38629 1.38629 1.38629 1.38629
33055 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33056 8 2.81865 0.23582 2.88868 2.35662 8 - -
33057 1.38629 1.38629 1.38629 1.38629
33058 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33059 9 2.81865 0.23582 2.88868 2.35662 9 - -
33060 1.38629 1.38629 1.38629 1.38629
33061 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33062 10 2.81865 0.23582 2.88868 2.35662 10 - -
33063 1.38629 1.38629 1.38629 1.38629
33064 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33065 11 0.23862 2.84929 2.43386 2.70756 11 - -
33066 1.38629 1.38629 1.38629 1.38629
33067 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33068 12 2.53331 3.02441 0.20344 2.88069 12 - -
33069 1.38629 1.38629 1.38629 1.38629
33070 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33071 13 2.53331 3.02441 0.20344 2.88069 13 - -
33072 1.38629 1.38629 1.38629 1.38629
33073 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33074 14 2.57915 2.25909 2.64442 0.28946 14 - -
33075 1.38629 1.38629 1.38629 1.38629
33076 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33077 15 2.81865 0.23582 2.88868 2.35662 15 - -
33078 1.38629 1.38629 1.38629 1.38629
33079 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33080 16 0.23862 2.84929 2.43386 2.70756 16 - -
33081 1.38629 1.38629 1.38629 1.38629
33082 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33083 17 2.53331 3.02441 0.20344 2.88069 17 - -
33084 1.38629 1.38629 1.38629 1.38629
33085 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33086 18 2.53331 3.02441 0.20344 2.88069 18 - -
33087 1.38629 1.38629 1.38629 1.38629
33088 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33089 19 2.81865 0.23582 2.88868 2.35662 19 - -
33090 1.38629 1.38629 1.38629 1.38629
33091 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33092 20 2.53331 3.02441 0.20344 2.88069 20 - -
33093 1.38629 1.38629 1.38629 1.38629
33094 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33095 21 2.53331 3.02441 0.20344 2.88069 21 - -
33096 1.38629 1.38629 1.38629 1.38629
33097 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33098 22 2.53331 3.02441 0.20344 2.88069 22 - -
33099 1.38629 1.38629 1.38629 1.38629
33100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33101 23 0.23862 2.84929 2.43386 2.70756 23 - -
33102 1.38629 1.38629 1.38629 1.38629
33103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33104 24 2.57915 2.25909 2.64442 0.28946 24 - -
33105 1.38629 1.38629 1.38629 1.38629
33106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33107 25 2.57915 2.25909 2.64442 0.28946 25 - -
33108 1.38629 1.38629 1.38629 1.38629
33109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33110 26 0.23862 2.84929 2.43386 2.70756 26 - -
33111 1.38629 1.38629 1.38629 1.38629
33112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33113 27 2.81865 0.23582 2.88868 2.35662 27 - -
33114 1.38629 1.38629 1.38629 1.38629
33115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33116 28 2.81865 0.23582 2.88868 2.35662 28 - -
33117 1.38629 1.38629 1.38629 1.38629
33118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33119 29 2.81865 0.23582 2.88868 2.35662 29 - -
33120 1.38629 1.38629 1.38629 1.38629
33121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33122 30 2.53331 3.02441 0.20344 2.88069 30 - -
33123 1.38629 1.38629 1.38629 1.38629
33124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33125 31 2.81865 0.23582 2.88868 2.35662 31 - -
33126 1.38629 1.38629 1.38629 1.38629
33127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33128 32 2.57915 2.25909 2.64442 0.28946 32 - -
33129 1.38629 1.38629 1.38629 1.38629
33130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33131 33 2.53331 3.02441 0.20344 2.88069 33 - -
33132 1.38629 1.38629 1.38629 1.38629
33133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33134 34 0.23862 2.84929 2.43386 2.70756 34 - -
33135 1.38629 1.38629 1.38629 1.38629
33136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33137 35 2.53331 3.02441 0.20344 2.88069 35 - -
33138 1.38629 1.38629 1.38629 1.38629
33139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33140 36 2.57915 2.25909 2.64442 0.28946 36 - -
33141 1.38629 1.38629 1.38629 1.38629
33142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33143 37 2.57915 2.25909 2.64442 0.28946 37 - -
33144 1.38629 1.38629 1.38629 1.38629
33145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33146 38 0.23862 2.84929 2.43386 2.70756 38 - -
33147 1.38629 1.38629 1.38629 1.38629
33148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33149 39 0.23862 2.84929 2.43386 2.70756 39 - -
33150 1.38629 1.38629 1.38629 1.38629
33151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33152 40 2.53331 3.02441 0.20344 2.88069 40 - -
33153 1.38629 1.38629 1.38629 1.38629
33154 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33155 41 2.81865 0.23582 2.88868 2.35662 41 - -
33156 1.38629 1.38629 1.38629 1.38629
33157 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33158 42 0.23862 2.84929 2.43386 2.70756 42 - -
33159 1.38629 1.38629 1.38629 1.38629
33160 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33161 43 0.23862 2.84929 2.43386 2.70756 43 - -
33162 1.38629 1.38629 1.38629 1.38629
33163 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33164 44 1.03732 1.95876 1.96551 1.00928 44 - -
33165 1.38629 1.38629 1.38629 1.38629
33166 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33167 45 2.81865 0.23582 2.88868 2.35662 45 - -
33168 1.38629 1.38629 1.38629 1.38629
33169 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
33170 //
33171 HMMER3/b [3.0 | March 2010]
33172 NAME 4_LSU_Tracheophyta_4_LSU_start_twentyseven_long
33173 LENG 45
33174 ALPH DNA
33175 RF no
33176 CS no
33177 MAP yes
33178 DATE Sun Feb 19 00:22:53 2012
33179 NSEQ 2
33180 EFFN 2.000000
33181 CKSUM 3585155037
33182 STATS LOCAL MSV -7.6411 0.72790
33183 STATS LOCAL VITERBI -8.1958 0.72790
33184 STATS LOCAL FORWARD -3.1897 0.72790
33185 HMM A C G T
33186 m->m m->i m->d i->m i->i d->m d->d
33187 COMPO 1.43267 1.24706 1.24508 1.68167
33188 1.38629 1.38629 1.38629 1.38629
33189 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
33190 1 0.23862 2.84929 2.43386 2.70756 1 - -
33191 1.38629 1.38629 1.38629 1.38629
33192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33193 2 2.81865 0.23582 2.88868 2.35662 2 - -
33194 1.38629 1.38629 1.38629 1.38629
33195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33196 3 2.53331 3.02441 0.20344 2.88069 3 - -
33197 1.38629 1.38629 1.38629 1.38629
33198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33199 4 2.81865 0.23582 2.88868 2.35662 4 - -
33200 1.38629 1.38629 1.38629 1.38629
33201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33202 5 2.53331 3.02441 0.20344 2.88069 5 - -
33203 1.38629 1.38629 1.38629 1.38629
33204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33205 6 0.23862 2.84929 2.43386 2.70756 6 - -
33206 1.38629 1.38629 1.38629 1.38629
33207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33208 7 2.81865 0.23582 2.88868 2.35662 7 - -
33209 1.38629 1.38629 1.38629 1.38629
33210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33211 8 2.81865 0.23582 2.88868 2.35662 8 - -
33212 1.38629 1.38629 1.38629 1.38629
33213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33214 9 2.81865 0.23582 2.88868 2.35662 9 - -
33215 1.38629 1.38629 1.38629 1.38629
33216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33217 10 2.81865 0.23582 2.88868 2.35662 10 - -
33218 1.38629 1.38629 1.38629 1.38629
33219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33220 11 0.23862 2.84929 2.43386 2.70756 11 - -
33221 1.38629 1.38629 1.38629 1.38629
33222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33223 12 2.53331 3.02441 0.20344 2.88069 12 - -
33224 1.38629 1.38629 1.38629 1.38629
33225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33226 13 2.53331 3.02441 0.20344 2.88069 13 - -
33227 1.38629 1.38629 1.38629 1.38629
33228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33229 14 2.57915 2.25909 2.64442 0.28946 14 - -
33230 1.38629 1.38629 1.38629 1.38629
33231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33232 15 2.81865 0.23582 2.88868 2.35662 15 - -
33233 1.38629 1.38629 1.38629 1.38629
33234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33235 16 0.23862 2.84929 2.43386 2.70756 16 - -
33236 1.38629 1.38629 1.38629 1.38629
33237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33238 17 2.53331 3.02441 0.20344 2.88069 17 - -
33239 1.38629 1.38629 1.38629 1.38629
33240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33241 18 2.53331 3.02441 0.20344 2.88069 18 - -
33242 1.38629 1.38629 1.38629 1.38629
33243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33244 19 2.81865 0.23582 2.88868 2.35662 19 - -
33245 1.38629 1.38629 1.38629 1.38629
33246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33247 20 2.53331 3.02441 0.20344 2.88069 20 - -
33248 1.38629 1.38629 1.38629 1.38629
33249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33250 21 2.53331 3.02441 0.20344 2.88069 21 - -
33251 1.38629 1.38629 1.38629 1.38629
33252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33253 22 2.53331 3.02441 0.20344 2.88069 22 - -
33254 1.38629 1.38629 1.38629 1.38629
33255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33256 23 0.92825 2.28391 0.95698 2.13014 23 - -
33257 1.38629 1.38629 1.38629 1.38629
33258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33259 24 2.81865 0.23582 2.88868 2.35662 24 - -
33260 1.38629 1.38629 1.38629 1.38629
33261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33262 25 2.57915 2.25909 2.64442 0.28946 25 - -
33263 1.38629 1.38629 1.38629 1.38629
33264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33265 26 0.23862 2.84929 2.43386 2.70756 26 - -
33266 1.38629 1.38629 1.38629 1.38629
33267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33268 27 2.81865 0.23582 2.88868 2.35662 27 - -
33269 1.38629 1.38629 1.38629 1.38629
33270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33271 28 2.81865 0.23582 2.88868 2.35662 28 - -
33272 1.38629 1.38629 1.38629 1.38629
33273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33274 29 2.81865 0.23582 2.88868 2.35662 29 - -
33275 1.38629 1.38629 1.38629 1.38629
33276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33277 30 2.53331 3.02441 0.20344 2.88069 30 - -
33278 1.38629 1.38629 1.38629 1.38629
33279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33280 31 2.81865 0.23582 2.88868 2.35662 31 - -
33281 1.38629 1.38629 1.38629 1.38629
33282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33283 32 2.57915 2.25909 2.64442 0.28946 32 - -
33284 1.38629 1.38629 1.38629 1.38629
33285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33286 33 2.53331 3.02441 0.20344 2.88069 33 - -
33287 1.38629 1.38629 1.38629 1.38629
33288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33289 34 0.23862 2.84929 2.43386 2.70756 34 - -
33290 1.38629 1.38629 1.38629 1.38629
33291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33292 35 2.53331 3.02441 0.20344 2.88069 35 - -
33293 1.38629 1.38629 1.38629 1.38629
33294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33295 36 2.57915 2.25909 2.64442 0.28946 36 - -
33296 1.38629 1.38629 1.38629 1.38629
33297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33298 37 2.57915 2.25909 2.64442 0.28946 37 - -
33299 1.38629 1.38629 1.38629 1.38629
33300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33301 38 2.57915 2.25909 2.64442 0.28946 38 - -
33302 1.38629 1.38629 1.38629 1.38629
33303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33304 39 0.23862 2.84929 2.43386 2.70756 39 - -
33305 1.38629 1.38629 1.38629 1.38629
33306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33307 40 0.23862 2.84929 2.43386 2.70756 40 - -
33308 1.38629 1.38629 1.38629 1.38629
33309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33310 41 2.53331 3.02441 0.20344 2.88069 41 - -
33311 1.38629 1.38629 1.38629 1.38629
33312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33313 42 2.81865 0.23582 2.88868 2.35662 42 - -
33314 1.38629 1.38629 1.38629 1.38629
33315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33316 43 0.23862 2.84929 2.43386 2.70756 43 - -
33317 1.38629 1.38629 1.38629 1.38629
33318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33319 44 2.57915 2.25909 2.64442 0.28946 44 - -
33320 1.38629 1.38629 1.38629 1.38629
33321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
33322 45 0.23862 2.84929 2.43386 2.70756 45 - -
33323 1.38629 1.38629 1.38629 1.38629
33324 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
33325 //
33326 HMMER3/b [3.0 | March 2010]
33327 NAME 4_LSU_Tracheophyta_4_LSU_start_twentysix_long
33328 LENG 45
33329 ALPH DNA
33330 RF no
33331 CS no
33332 MAP yes
33333 DATE Sun Feb 19 00:22:44 2012
33334 NSEQ 7
33335 EFFN 3.216309
33336 CKSUM 3292637804
33337 STATS LOCAL MSV -8.0713 0.71932
33338 STATS LOCAL VITERBI -7.7834 0.71932
33339 STATS LOCAL FORWARD -4.0416 0.71932
33340 HMM A C G T
33341 m->m m->i m->d i->m i->i d->m d->d
33342 COMPO 1.16267 1.39809 1.44531 1.58666
33343 1.38629 1.38629 1.38629 1.38629
33344 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 *
33345 1 0.14656 3.34560 2.77935 3.24400 1 - -
33346 1.38629 1.38629 1.38629 1.38629
33347 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33348 2 2.92319 3.55246 0.12110 3.45350 2 - -
33349 1.38629 1.38629 1.38629 1.38629
33350 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33351 3 3.39312 0.13508 3.44425 2.79979 3 - -
33352 1.38629 1.38629 1.38629 1.38629
33353 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33354 4 0.14656 3.34560 2.77935 3.24400 4 - -
33355 1.38629 1.38629 1.38629 1.38629
33356 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33357 5 2.92319 3.55246 0.12110 3.45350 5 - -
33358 1.38629 1.38629 1.38629 1.38629
33359 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33360 6 0.14656 3.34560 2.77935 3.24400 6 - -
33361 1.38629 1.38629 1.38629 1.38629
33362 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33363 7 3.39312 0.13508 3.44425 2.79979 7 - -
33364 1.38629 1.38629 1.38629 1.38629
33365 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33366 8 3.39312 0.13508 3.44425 2.79979 8 - -
33367 1.38629 1.38629 1.38629 1.38629
33368 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33369 9 3.05375 2.57294 3.10323 0.18440 9 - -
33370 1.38629 1.38629 1.38629 1.38629
33371 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33372 10 3.39312 0.13508 3.44425 2.79979 10 - -
33373 1.38629 1.38629 1.38629 1.38629
33374 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33375 11 3.05375 2.57294 3.10323 0.18440 11 - -
33376 1.38629 1.38629 1.38629 1.38629
33377 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33378 12 2.92319 3.55246 0.12110 3.45350 12 - -
33379 1.38629 1.38629 1.38629 1.38629
33380 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33381 13 0.14656 3.34560 2.77935 3.24400 13 - -
33382 1.38629 1.38629 1.38629 1.38629
33383 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33384 14 3.05375 2.57294 3.10323 0.18440 14 - -
33385 1.38629 1.38629 1.38629 1.38629
33386 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33387 15 3.39312 0.13508 3.44425 2.79979 15 - -
33388 1.38629 1.38629 1.38629 1.38629
33389 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33390 16 0.14656 3.34560 2.77935 3.24400 16 - -
33391 1.38629 1.38629 1.38629 1.38629
33392 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33393 17 2.92319 3.55246 0.12110 3.45350 17 - -
33394 1.38629 1.38629 1.38629 1.38629
33395 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33396 18 2.92319 3.55246 0.12110 3.45350 18 - -
33397 1.38629 1.38629 1.38629 1.38629
33398 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33399 19 0.14656 3.34560 2.77935 3.24400 19 - -
33400 1.38629 1.38629 1.38629 1.38629
33401 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33402 20 0.14656 3.34560 2.77935 3.24400 20 - -
33403 1.38629 1.38629 1.38629 1.38629
33404 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33405 21 0.14656 3.34560 2.77935 3.24400 21 - -
33406 1.38629 1.38629 1.38629 1.38629
33407 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33408 22 2.92319 3.55246 0.12110 3.45350 22 - -
33409 1.38629 1.38629 1.38629 1.38629
33410 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33411 23 0.14656 3.34560 2.77935 3.24400 23 - -
33412 1.38629 1.38629 1.38629 1.38629
33413 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33414 24 3.39312 0.13508 3.44425 2.79979 24 - -
33415 1.38629 1.38629 1.38629 1.38629
33416 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33417 25 3.05375 2.57294 3.10323 0.18440 25 - -
33418 1.38629 1.38629 1.38629 1.38629
33419 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33420 26 0.14656 3.34560 2.77935 3.24400 26 - -
33421 1.38629 1.38629 1.38629 1.38629
33422 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33423 27 3.39312 0.13508 3.44425 2.79979 27 - -
33424 1.38629 1.38629 1.38629 1.38629
33425 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33426 28 3.39312 0.13508 3.44425 2.79979 28 - -
33427 1.38629 1.38629 1.38629 1.38629
33428 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33429 29 3.39312 0.13508 3.44425 2.79979 29 - -
33430 1.38629 1.38629 1.38629 1.38629
33431 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33432 30 2.92319 3.55246 0.12110 3.45350 30 - -
33433 1.38629 1.38629 1.38629 1.38629
33434 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33435 31 3.39312 0.13508 3.44425 2.79979 31 - -
33436 1.38629 1.38629 1.38629 1.38629
33437 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33438 32 3.05375 2.57294 3.10323 0.18440 32 - -
33439 1.38629 1.38629 1.38629 1.38629
33440 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33441 33 2.92319 3.55246 0.12110 3.45350 33 - -
33442 1.38629 1.38629 1.38629 1.38629
33443 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33444 34 0.14656 3.34560 2.77935 3.24400 34 - -
33445 1.38629 1.38629 1.38629 1.38629
33446 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33447 35 2.92319 3.55246 0.12110 3.45350 35 - -
33448 1.38629 1.38629 1.38629 1.38629
33449 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33450 36 3.05375 2.57294 3.10323 0.18440 36 - -
33451 1.38629 1.38629 1.38629 1.38629
33452 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33453 37 3.05375 2.57294 3.10323 0.18440 37 - -
33454 1.38629 1.38629 1.38629 1.38629
33455 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33456 38 3.05375 2.57294 3.10323 0.18440 38 - -
33457 1.38629 1.38629 1.38629 1.38629
33458 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33459 39 0.14656 3.34560 2.77935 3.24400 39 - -
33460 1.38629 1.38629 1.38629 1.38629
33461 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33462 40 0.14656 3.34560 2.77935 3.24400 40 - -
33463 1.38629 1.38629 1.38629 1.38629
33464 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33465 41 2.92319 3.55246 0.12110 3.45350 41 - -
33466 1.38629 1.38629 1.38629 1.38629
33467 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33468 42 3.39312 0.13508 3.44425 2.79979 42 - -
33469 1.38629 1.38629 1.38629 1.38629
33470 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33471 43 0.14656 3.34560 2.77935 3.24400 43 - -
33472 1.38629 1.38629 1.38629 1.38629
33473 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33474 44 3.05375 2.57294 3.10323 0.18440 44 - -
33475 1.38629 1.38629 1.38629 1.38629
33476 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
33477 45 0.14656 3.34560 2.77935 3.24400 45 - -
33478 1.38629 1.38629 1.38629 1.38629
33479 0.01899 3.97336 * 1.46634 0.26236 0.00000 *
33480 //
33481 HMMER3/b [3.0 | March 2010]
33482 NAME 4_LSU_Tracheophyta_4_LSU_start_twentythree_long
33483 LENG 45
33484 ALPH DNA
33485 RF no
33486 CS no
33487 MAP yes
33488 DATE Sun Feb 19 00:21:38 2012
33489 NSEQ 5
33490 EFFN 3.139648
33491 CKSUM 4105697300
33492 STATS LOCAL MSV -8.2688 0.71933
33493 STATS LOCAL VITERBI -7.5622 0.71933
33494 STATS LOCAL FORWARD -4.0037 0.71933
33495 HMM A C G T
33496 m->m m->i m->d i->m i->i d->m d->d
33497 COMPO 1.40230 1.33627 1.19527 1.66852
33498 1.38629 1.38629 1.38629 1.38629
33499 0.03818 3.97775 3.97775 1.46634 0.26236 0.00000 *
33500 1 0.15014 3.31984 2.76249 3.21585 1 - -
33501 1.38629 1.38629 1.38629 1.38629
33502 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33503 2 3.36335 0.13885 3.41571 2.77793 2 - -
33504 1.38629 1.38629 1.38629 1.38629
33505 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33506 3 2.90489 3.52608 0.12414 3.42445 3 - -
33507 1.38629 1.38629 1.38629 1.38629
33508 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33509 4 0.15014 3.31984 2.76249 3.21585 4 - -
33510 1.38629 1.38629 1.38629 1.38629
33511 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33512 5 2.90489 3.52608 0.12414 3.42445 5 - -
33513 1.38629 1.38629 1.38629 1.38629
33514 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33515 6 0.15014 3.31984 2.76249 3.21585 6 - -
33516 1.38629 1.38629 1.38629 1.38629
33517 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33518 7 3.36335 0.13885 3.41571 2.77793 7 - -
33519 1.38629 1.38629 1.38629 1.38629
33520 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33521 8 3.36335 0.13885 3.41571 2.77793 8 - -
33522 1.38629 1.38629 1.38629 1.38629
33523 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33524 9 3.02802 2.55652 3.07847 0.18876 9 - -
33525 1.38629 1.38629 1.38629 1.38629
33526 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33527 10 3.36335 0.13885 3.41571 2.77793 10 - -
33528 1.38629 1.38629 1.38629 1.38629
33529 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33530 11 0.15014 3.31984 2.76249 3.21585 11 - -
33531 1.38629 1.38629 1.38629 1.38629
33532 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33533 12 2.90489 3.52608 0.12414 3.42445 12 - -
33534 1.38629 1.38629 1.38629 1.38629
33535 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33536 13 2.90489 3.52608 0.12414 3.42445 13 - -
33537 1.38629 1.38629 1.38629 1.38629
33538 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33539 14 3.02802 2.55652 3.07847 0.18876 14 - -
33540 1.38629 1.38629 1.38629 1.38629
33541 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33542 15 3.36335 0.13885 3.41571 2.77793 15 - -
33543 1.38629 1.38629 1.38629 1.38629
33544 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33545 16 0.15014 3.31984 2.76249 3.21585 16 - -
33546 1.38629 1.38629 1.38629 1.38629
33547 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33548 17 2.90489 3.52608 0.12414 3.42445 17 - -
33549 1.38629 1.38629 1.38629 1.38629
33550 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33551 18 2.90489 3.52608 0.12414 3.42445 18 - -
33552 1.38629 1.38629 1.38629 1.38629
33553 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33554 19 3.36335 0.13885 3.41571 2.77793 19 - -
33555 1.38629 1.38629 1.38629 1.38629
33556 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33557 20 2.90489 3.52608 0.12414 3.42445 20 - -
33558 1.38629 1.38629 1.38629 1.38629
33559 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33560 21 2.90489 3.52608 0.12414 3.42445 21 - -
33561 1.38629 1.38629 1.38629 1.38629
33562 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33563 22 2.90489 3.52608 0.12414 3.42445 22 - -
33564 1.38629 1.38629 1.38629 1.38629
33565 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33566 23 2.90489 3.52608 0.12414 3.42445 23 - -
33567 1.38629 1.38629 1.38629 1.38629
33568 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33569 24 3.36335 0.13885 3.41571 2.77793 24 - -
33570 1.38629 1.38629 1.38629 1.38629
33571 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33572 25 3.02802 2.55652 3.07847 0.18876 25 - -
33573 1.38629 1.38629 1.38629 1.38629
33574 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33575 26 0.15014 3.31984 2.76249 3.21585 26 - -
33576 1.38629 1.38629 1.38629 1.38629
33577 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33578 27 3.36335 0.13885 3.41571 2.77793 27 - -
33579 1.38629 1.38629 1.38629 1.38629
33580 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33581 28 3.36335 0.13885 3.41571 2.77793 28 - -
33582 1.38629 1.38629 1.38629 1.38629
33583 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33584 29 3.36335 0.13885 3.41571 2.77793 29 - -
33585 1.38629 1.38629 1.38629 1.38629
33586 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33587 30 2.90489 3.52608 0.12414 3.42445 30 - -
33588 1.38629 1.38629 1.38629 1.38629
33589 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33590 31 3.36335 0.13885 3.41571 2.77793 31 - -
33591 1.38629 1.38629 1.38629 1.38629
33592 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33593 32 3.02802 2.55652 3.07847 0.18876 32 - -
33594 1.38629 1.38629 1.38629 1.38629
33595 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33596 33 2.90489 3.52608 0.12414 3.42445 33 - -
33597 1.38629 1.38629 1.38629 1.38629
33598 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33599 34 0.15014 3.31984 2.76249 3.21585 34 - -
33600 1.38629 1.38629 1.38629 1.38629
33601 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33602 35 2.90489 3.52608 0.12414 3.42445 35 - -
33603 1.38629 1.38629 1.38629 1.38629
33604 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33605 36 3.02802 2.55652 3.07847 0.18876 36 - -
33606 1.38629 1.38629 1.38629 1.38629
33607 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33608 37 3.02802 2.55652 3.07847 0.18876 37 - -
33609 1.38629 1.38629 1.38629 1.38629
33610 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33611 38 3.02802 2.55652 3.07847 0.18876 38 - -
33612 1.38629 1.38629 1.38629 1.38629
33613 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33614 39 0.15014 3.31984 2.76249 3.21585 39 - -
33615 1.38629 1.38629 1.38629 1.38629
33616 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33617 40 0.15014 3.31984 2.76249 3.21585 40 - -
33618 1.38629 1.38629 1.38629 1.38629
33619 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33620 41 2.90489 3.52608 0.12414 3.42445 41 - -
33621 1.38629 1.38629 1.38629 1.38629
33622 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33623 42 3.36335 0.13885 3.41571 2.77793 42 - -
33624 1.38629 1.38629 1.38629 1.38629
33625 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33626 43 0.15014 3.31984 2.76249 3.21585 43 - -
33627 1.38629 1.38629 1.38629 1.38629
33628 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33629 44 3.02802 2.55652 3.07847 0.18876 44 - -
33630 1.38629 1.38629 1.38629 1.38629
33631 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547
33632 45 0.15014 3.31984 2.76249 3.21585 45 - -
33633 1.38629 1.38629 1.38629 1.38629
33634 0.01927 3.95884 * 1.46634 0.26236 0.00000 *
33635 //
33636 HMMER3/b [3.0 | March 2010]
33637 NAME 4_LSU_Tracheophyta_4_LSU_start_twentytwo_long
33638 LENG 45
33639 ALPH DNA
33640 RF no
33641 CS no
33642 MAP yes
33643 DATE Sun Feb 19 00:21:30 2012
33644 NSEQ 416
33645 EFFN 3.373779
33646 CKSUM 2904155972
33647 STATS LOCAL MSV -7.7211 0.71932
33648 STATS LOCAL VITERBI -7.7573 0.71932
33649 STATS LOCAL FORWARD -3.6591 0.71932
33650 HMM A C G T
33651 m->m m->i m->d i->m i->i d->m d->d
33652 COMPO 1.47008 1.14522 1.31744 1.69217
33653 1.38629 1.38629 1.38629 1.38629
33654 0.03654 4.02066 4.02066 1.46634 0.26236 0.00000 *
33655 1 3.34205 0.14440 3.28352 2.78709 1 - -
33656 1.38629 1.38629 1.38629 1.38629
33657 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33658 2 3.39278 0.14047 3.44316 2.72615 2 - -
33659 1.38629 1.38629 1.38629 1.38629
33660 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33661 3 2.81506 3.53865 0.12892 3.44198 3 - -
33662 1.38629 1.38629 1.38629 1.38629
33663 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33664 4 3.38510 0.14215 3.43572 2.71163 4 - -
33665 1.38629 1.38629 1.38629 1.38629
33666 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33667 5 2.83375 3.54759 0.12702 3.45142 5 - -
33668 1.38629 1.38629 1.38629 1.38629
33669 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33670 6 0.13977 3.39648 2.81245 3.29969 6 - -
33671 1.38629 1.38629 1.38629 1.38629
33672 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33673 7 3.45179 0.12800 3.50045 2.84258 7 - -
33674 1.38629 1.38629 1.38629 1.38629
33675 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33676 8 3.45179 0.12800 3.50045 2.84258 8 - -
33677 1.38629 1.38629 1.38629 1.38629
33678 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33679 9 3.45179 0.12800 3.50045 2.84258 9 - -
33680 1.38629 1.38629 1.38629 1.38629
33681 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33682 10 3.31724 0.15759 3.37000 2.58813 10 - -
33683 1.38629 1.38629 1.38629 1.38629
33684 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33685 11 0.13977 3.39648 2.81245 3.29969 11 - -
33686 1.38629 1.38629 1.38629 1.38629
33687 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33688 12 2.95881 3.60419 0.11538 3.51057 12 - -
33689 1.38629 1.38629 1.38629 1.38629
33690 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33691 13 2.95881 3.60419 0.11538 3.51057 13 - -
33692 1.38629 1.38629 1.38629 1.38629
33693 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33694 14 3.10501 2.60557 3.15254 0.17606 14 - -
33695 1.38629 1.38629 1.38629 1.38629
33696 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33697 15 3.20439 0.14712 3.37927 2.77820 15 - -
33698 1.38629 1.38629 1.38629 1.38629
33699 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33700 16 0.13977 3.39648 2.81245 3.29969 16 - -
33701 1.38629 1.38629 1.38629 1.38629
33702 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33703 17 2.95881 3.60419 0.11538 3.51057 17 - -
33704 1.38629 1.38629 1.38629 1.38629
33705 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33706 18 2.55105 2.36340 2.08619 0.35134 18 - -
33707 1.38629 1.38629 1.38629 1.38629
33708 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33709 19 3.45179 0.12800 3.50045 2.84258 19 - -
33710 1.38629 1.38629 1.38629 1.38629
33711 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33712 20 2.76420 3.51369 0.13430 3.41557 20 - -
33713 1.38629 1.38629 1.38629 1.38629
33714 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33715 21 2.95881 3.60419 0.11538 3.51057 21 - -
33716 1.38629 1.38629 1.38629 1.38629
33717 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33718 22 2.95881 3.60419 0.11538 3.51057 22 - -
33719 1.38629 1.38629 1.38629 1.38629
33720 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33721 23 0.13977 3.39648 2.81245 3.29969 23 - -
33722 1.38629 1.38629 1.38629 1.38629
33723 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33724 24 3.45179 0.12800 3.50045 2.84258 24 - -
33725 1.38629 1.38629 1.38629 1.38629
33726 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33727 25 2.63795 1.62383 2.70236 0.40902 25 - -
33728 1.38629 1.38629 1.38629 1.38629
33729 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33730 26 0.13977 3.39648 2.81245 3.29969 26 - -
33731 1.38629 1.38629 1.38629 1.38629
33732 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33733 27 3.45179 0.12800 3.50045 2.84258 27 - -
33734 1.38629 1.38629 1.38629 1.38629
33735 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33736 28 3.45179 0.12800 3.50045 2.84258 28 - -
33737 1.38629 1.38629 1.38629 1.38629
33738 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33739 29 3.45179 0.12800 3.50045 2.84258 29 - -
33740 1.38629 1.38629 1.38629 1.38629
33741 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33742 30 2.95881 3.60419 0.11538 3.51057 30 - -
33743 1.38629 1.38629 1.38629 1.38629
33744 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33745 31 3.45179 0.12800 3.50045 2.84258 31 - -
33746 1.38629 1.38629 1.38629 1.38629
33747 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33748 32 3.10501 2.60557 3.15254 0.17606 32 - -
33749 1.38629 1.38629 1.38629 1.38629
33750 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33751 33 2.83237 3.47661 0.13647 3.27592 33 - -
33752 1.38629 1.38629 1.38629 1.38629
33753 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33754 34 0.13977 3.39648 2.81245 3.29969 34 - -
33755 1.38629 1.38629 1.38629 1.38629
33756 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33757 35 2.59736 3.42566 0.15441 3.32199 35 - -
33758 1.38629 1.38629 1.38629 1.38629
33759 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33760 36 3.10501 2.60557 3.15254 0.17606 36 - -
33761 1.38629 1.38629 1.38629 1.38629
33762 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33763 37 3.10501 2.60557 3.15254 0.17606 37 - -
33764 1.38629 1.38629 1.38629 1.38629
33765 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33766 38 3.10501 2.60557 3.15254 0.17606 38 - -
33767 1.38629 1.38629 1.38629 1.38629
33768 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33769 39 0.13977 3.39648 2.81245 3.29969 39 - -
33770 1.38629 1.38629 1.38629 1.38629
33771 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33772 40 0.13977 3.39648 2.81245 3.29969 40 - -
33773 1.38629 1.38629 1.38629 1.38629
33774 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33775 41 2.95881 3.60419 0.11538 3.51057 41 - -
33776 1.38629 1.38629 1.38629 1.38629
33777 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33778 42 3.45179 0.12800 3.50045 2.84258 42 - -
33779 1.38629 1.38629 1.38629 1.38629
33780 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33781 43 0.13977 3.39648 2.81245 3.29969 43 - -
33782 1.38629 1.38629 1.38629 1.38629
33783 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33784 44 3.10501 2.60557 3.15254 0.17606 44 - -
33785 1.38629 1.38629 1.38629 1.38629
33786 0.03654 4.02066 4.02066 1.46634 0.26236 1.09861 0.40547
33787 45 0.13977 3.39648 2.81245 3.29969 45 - -
33788 1.38629 1.38629 1.38629 1.38629
33789 0.01844 4.00255 * 1.46634 0.26236 0.00000 *
33790 //
33791 HMMER3/b [3.0 | March 2010]
33792 NAME 4_LSU_Tracheophyta_4_LSU_start_two_long
33793 LENG 45
33794 ALPH DNA
33795 RF no
33796 CS no
33797 MAP yes
33798 DATE Sun Feb 19 00:11:02 2012
33799 NSEQ 88
33800 EFFN 3.730225
33801 CKSUM 289705699
33802 STATS LOCAL MSV -7.0698 0.71932
33803 STATS LOCAL VITERBI -7.7391 0.71932
33804 STATS LOCAL FORWARD -3.8541 0.71932
33805 HMM A C G T
33806 m->m m->i m->d i->m i->i d->m d->d
33807 COMPO 1.47805 1.22403 1.23030 1.68378
33808 1.38629 1.38629 1.38629 1.38629
33809 0.03431 4.08265 4.08265 1.46634 0.26236 0.00000 *
33810 1 1.27419 1.16179 2.07688 1.26551 1 - -
33811 1.38629 1.38629 1.38629 1.38629
33812 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33813 2 2.28831 0.85829 2.43975 0.94806 2 - -
33814 1.38629 1.38629 1.38629 1.38629
33815 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33816 3 3.03087 3.71007 0.10461 3.62777 3 - -
33817 1.38629 1.38629 1.38629 1.38629
33818 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33819 4 3.57309 0.11469 3.61641 2.92985 4 - -
33820 1.38629 1.38629 1.38629 1.38629
33821 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33822 5 3.03087 3.71007 0.10461 3.62777 5 - -
33823 1.38629 1.38629 1.38629 1.38629
33824 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33825 6 0.12678 3.50230 2.88068 3.41576 6 - -
33826 1.38629 1.38629 1.38629 1.38629
33827 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33828 7 3.57309 0.11469 3.61641 2.92985 7 - -
33829 1.38629 1.38629 1.38629 1.38629
33830 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33831 8 3.57309 0.11469 3.61641 2.92985 8 - -
33832 1.38629 1.38629 1.38629 1.38629
33833 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33834 9 3.57309 0.11469 3.61641 2.92985 9 - -
33835 1.38629 1.38629 1.38629 1.38629
33836 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33837 10 3.57309 0.11469 3.61641 2.92985 10 - -
33838 1.38629 1.38629 1.38629 1.38629
33839 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33840 11 0.12678 3.50230 2.88068 3.41576 11 - -
33841 1.38629 1.38629 1.38629 1.38629
33842 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33843 12 3.03087 3.71007 0.10461 3.62777 12 - -
33844 1.38629 1.38629 1.38629 1.38629
33845 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33846 13 3.03087 3.71007 0.10461 3.62777 13 - -
33847 1.38629 1.38629 1.38629 1.38629
33848 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33849 14 3.21354 2.67441 3.25685 0.15978 14 - -
33850 1.38629 1.38629 1.38629 1.38629
33851 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33852 15 3.48081 0.13319 3.52743 2.74053 15 - -
33853 1.38629 1.38629 1.38629 1.38629
33854 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33855 16 0.12678 3.50230 2.88068 3.41576 16 - -
33856 1.38629 1.38629 1.38629 1.38629
33857 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33858 17 3.03087 3.71007 0.10461 3.62777 17 - -
33859 1.38629 1.38629 1.38629 1.38629
33860 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33861 18 2.59203 3.50425 0.14857 3.40749 18 - -
33862 1.38629 1.38629 1.38629 1.38629
33863 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33864 19 3.48923 0.13143 3.53554 2.75682 19 - -
33865 1.38629 1.38629 1.38629 1.38629
33866 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33867 20 2.86666 3.64130 0.11844 3.55481 20 - -
33868 1.38629 1.38629 1.38629 1.38629
33869 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33870 21 3.03087 3.71007 0.10461 3.62777 21 - -
33871 1.38629 1.38629 1.38629 1.38629
33872 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33873 22 3.03087 3.71007 0.10461 3.62777 22 - -
33874 1.38629 1.38629 1.38629 1.38629
33875 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33876 23 0.65536 2.61447 1.12942 2.47315 23 - -
33877 1.38629 1.38629 1.38629 1.38629
33878 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33879 24 3.11117 0.23074 3.17034 2.12428 24 - -
33880 1.38629 1.38629 1.38629 1.38629
33881 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33882 25 3.13072 2.46267 3.17737 0.18704 25 - -
33883 1.38629 1.38629 1.38629 1.38629
33884 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33885 26 0.12678 3.50230 2.88068 3.41576 26 - -
33886 1.38629 1.38629 1.38629 1.38629
33887 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33888 27 3.57309 0.11469 3.61641 2.92985 27 - -
33889 1.38629 1.38629 1.38629 1.38629
33890 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33891 28 3.57309 0.11469 3.61641 2.92985 28 - -
33892 1.38629 1.38629 1.38629 1.38629
33893 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33894 29 3.57309 0.11469 3.61641 2.92985 29 - -
33895 1.38629 1.38629 1.38629 1.38629
33896 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33897 30 3.03087 3.71007 0.10461 3.62777 30 - -
33898 1.38629 1.38629 1.38629 1.38629
33899 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33900 31 3.57309 0.11469 3.61641 2.92985 31 - -
33901 1.38629 1.38629 1.38629 1.38629
33902 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33903 32 3.21354 2.67441 3.25685 0.15978 32 - -
33904 1.38629 1.38629 1.38629 1.38629
33905 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33906 33 3.03087 3.71007 0.10461 3.62777 33 - -
33907 1.38629 1.38629 1.38629 1.38629
33908 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33909 34 0.12678 3.50230 2.88068 3.41576 34 - -
33910 1.38629 1.38629 1.38629 1.38629
33911 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33912 35 2.52711 3.46798 0.15725 3.36850 35 - -
33913 1.38629 1.38629 1.38629 1.38629
33914 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33915 36 3.21354 2.67441 3.25685 0.15978 36 - -
33916 1.38629 1.38629 1.38629 1.38629
33917 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33918 37 3.21354 2.67441 3.25685 0.15978 37 - -
33919 1.38629 1.38629 1.38629 1.38629
33920 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33921 38 3.21354 2.67441 3.25685 0.15978 38 - -
33922 1.38629 1.38629 1.38629 1.38629
33923 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33924 39 0.12678 3.50230 2.88068 3.41576 39 - -
33925 1.38629 1.38629 1.38629 1.38629
33926 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33927 40 0.12678 3.50230 2.88068 3.41576 40 - -
33928 1.38629 1.38629 1.38629 1.38629
33929 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33930 41 3.03087 3.71007 0.10461 3.62777 41 - -
33931 1.38629 1.38629 1.38629 1.38629
33932 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33933 42 3.57309 0.11469 3.61641 2.92985 42 - -
33934 1.38629 1.38629 1.38629 1.38629
33935 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33936 43 0.12678 3.50230 2.88068 3.41576 43 - -
33937 1.38629 1.38629 1.38629 1.38629
33938 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33939 44 3.21354 2.67441 3.25685 0.15978 44 - -
33940 1.38629 1.38629 1.38629 1.38629
33941 0.03431 4.08265 4.08265 1.46634 0.26236 1.09861 0.40547
33942 45 0.12678 3.50230 2.88068 3.41576 45 - -
33943 1.38629 1.38629 1.38629 1.38629
33944 0.01730 4.06564 * 1.46634 0.26236 0.00000 *
33945 //
33946 HMMER3/b [3.0 | March 2010]
33947 NAME 1_SSU_Tracheophyta_1_SSU_end_five_long
33948 LENG 45
33949 ALPH DNA
33950 RF no
33951 CS no
33952 MAP yes
33953 DATE Thu Feb 16 22:45:55 2012
33954 NSEQ 2465
33955 EFFN 3.455687
33956 CKSUM 1242947486
33957 STATS LOCAL MSV -7.7138 0.71931
33958 STATS LOCAL VITERBI -7.6652 0.71931
33959 STATS LOCAL FORWARD -4.0912 0.71931
33960 HMM A C G T
33961 m->m m->i m->d i->m i->i d->m d->d
33962 COMPO 1.32651 1.63232 1.19484 1.44236
33963 1.38629 1.38629 1.38629 1.38629
33964 0.03600 4.03525 4.03525 1.46634 0.26236 0.00000 *
33965 1 0.13651 3.42193 2.82892 3.32757 1 - -
33966 1.38629 1.38629 1.38629 1.38629
33967 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33968 2 2.87155 3.58379 0.12201 3.49072 2 - -
33969 1.38629 1.38629 1.38629 1.38629
33970 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33971 3 3.13087 2.62199 3.17740 0.17201 3 - -
33972 1.38629 1.38629 1.38629 1.38629
33973 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33974 4 3.34613 0.14711 3.30399 2.73574 4 - -
33975 1.38629 1.38629 1.38629 1.38629
33976 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33977 5 2.74125 3.52096 0.13541 3.42407 5 - -
33978 1.38629 1.38629 1.38629 1.38629
33979 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33980 6 3.13087 2.62199 3.17740 0.17201 6 - -
33981 1.38629 1.38629 1.38629 1.38629
33982 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33983 7 0.13651 3.42193 2.82892 3.32757 7 - -
33984 1.38629 1.38629 1.38629 1.38629
33985 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33986 8 0.14488 3.38910 2.74880 3.29341 8 - -
33987 1.38629 1.38629 1.38629 1.38629
33988 0.03618 4.03525 4.02567 1.46634 0.26236 1.09861 0.40547
33989 9 3.48072 0.12467 3.52813 2.86353 9 - -
33990 1.38629 1.38629 1.38629 1.38629
33991 0.03601 4.03508 4.03508 1.46634 0.26236 1.09223 0.40867
33992 10 0.13651 3.42193 2.82892 3.32757 10 - -
33993 1.38629 1.38629 1.38629 1.38629
33994 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33995 11 0.13651 3.42193 2.82892 3.32757 11 - -
33996 1.38629 1.38629 1.38629 1.38629
33997 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
33998 12 2.97637 3.62986 0.11266 3.53894 12 - -
33999 1.38629 1.38629 1.38629 1.38629
34000 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34001 13 2.97637 3.62986 0.11266 3.53894 13 - -
34002 1.38629 1.38629 1.38629 1.38629
34003 0.03635 4.03525 4.01630 1.46634 0.26236 1.09861 0.40547
34004 14 3.13027 2.62161 3.17682 0.17211 14 - -
34005 1.38629 1.38629 1.38629 1.38629
34006 0.03602 4.03492 4.03492 1.46634 0.26236 1.08601 0.41182
34007 15 3.05631 2.43793 3.10554 0.19748 15 - -
34008 1.38629 1.38629 1.38629 1.38629
34009 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34010 16 2.95149 2.59145 3.10049 0.18898 16 - -
34011 1.38629 1.38629 1.38629 1.38629
34012 0.03654 4.03525 4.00658 1.46634 0.26236 1.09861 0.40547
34013 17 3.32248 0.15921 3.37495 2.56524 17 - -
34014 1.38629 1.38629 1.38629 1.38629
34015 0.03602 4.03474 4.03474 1.46634 0.26236 1.07959 0.41511
34016 18 3.37735 0.14191 3.35769 2.75915 18 - -
34017 1.38629 1.38629 1.38629 1.38629
34018 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34019 19 2.83503 3.44657 0.13154 3.42087 19 - -
34020 1.38629 1.38629 1.38629 1.38629
34021 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34022 20 3.09420 2.52888 3.14200 0.18423 20 - -
34023 1.38629 1.38629 1.38629 1.38629
34024 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34025 21 0.13651 3.42193 2.82892 3.32757 21 - -
34026 1.38629 1.38629 1.38629 1.38629
34027 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34028 22 2.97637 3.62986 0.11266 3.53894 22 - -
34029 1.38629 1.38629 1.38629 1.38629
34030 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34031 23 2.87064 3.53577 0.12816 3.36711 23 - -
34032 1.38629 1.38629 1.38629 1.38629
34033 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34034 24 3.04630 2.59008 2.98834 0.18985 24 - -
34035 1.38629 1.38629 1.38629 1.38629
34036 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34037 25 2.93777 3.43823 0.12432 3.44838 25 - -
34038 1.38629 1.38629 1.38629 1.38629
34039 0.04076 4.03525 3.80511 1.46634 0.26236 1.09861 0.40547
34040 26 0.13752 3.41397 2.82377 3.31885 26 - -
34041 1.38629 1.38629 1.38629 1.38629
34042 0.03617 4.03067 4.03067 1.46634 0.26236 0.95121 0.48820
34043 27 0.15869 3.24292 2.74030 3.14323 27 - -
34044 1.38629 1.38629 1.38629 1.38629
34045 0.03688 4.03525 3.98862 1.46634 0.26236 1.09861 0.40547
34046 28 3.47937 0.12482 3.52685 2.86256 28 - -
34047 1.38629 1.38629 1.38629 1.38629
34048 0.03603 4.03441 4.03441 1.46634 0.26236 1.06776 0.42125
34049 29 3.42591 0.13605 3.47498 2.75322 29 - -
34050 1.38629 1.38629 1.38629 1.38629
34051 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34052 30 3.13087 2.62199 3.17740 0.17201 30 - -
34053 1.38629 1.38629 1.38629 1.38629
34054 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34055 31 2.88935 3.59189 0.12034 3.49926 31 - -
34056 1.38629 1.38629 1.38629 1.38629
34057 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34058 32 3.38192 0.14107 3.36424 2.76456 32 - -
34059 1.38629 1.38629 1.38629 1.38629
34060 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34061 33 2.72561 3.35497 0.14585 3.34395 33 - -
34062 1.38629 1.38629 1.38629 1.38629
34063 0.04050 4.03525 3.81647 1.46634 0.26236 1.09861 0.40547
34064 34 2.73371 3.51155 0.13667 3.41384 34 - -
34065 1.38629 1.38629 1.38629 1.38629
34066 0.03777 4.03092 3.94736 1.46634 0.26236 0.96596 0.47903
34067 35 0.13689 3.41896 2.82700 3.32431 35 - -
34068 1.38629 1.38629 1.38629 1.38629
34069 0.03607 4.03354 4.03354 1.46634 0.26236 1.03799 0.43722
34070 36 0.16310 3.32144 2.59676 3.22186 36 - -
34071 1.38629 1.38629 1.38629 1.38629
34072 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34073 37 2.97637 3.62986 0.11266 3.53894 37 - -
34074 1.38629 1.38629 1.38629 1.38629
34075 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34076 38 2.88935 3.59189 0.12034 3.49926 38 - -
34077 1.38629 1.38629 1.38629 1.38629
34078 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34079 39 0.13651 3.42193 2.82892 3.32757 39 - -
34080 1.38629 1.38629 1.38629 1.38629
34081 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34082 40 3.13087 2.62199 3.17740 0.17201 40 - -
34083 1.38629 1.38629 1.38629 1.38629
34084 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34085 41 3.28730 0.13857 3.43663 2.81560 41 - -
34086 1.38629 1.38629 1.38629 1.38629
34087 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34088 42 0.14508 3.38831 2.74693 3.29259 42 - -
34089 1.38629 1.38629 1.38629 1.38629
34090 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34091 43 3.13087 2.62199 3.17740 0.17201 43 - -
34092 1.38629 1.38629 1.38629 1.38629
34093 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34094 44 3.10129 2.54646 3.14883 0.18182 44 - -
34095 1.38629 1.38629 1.38629 1.38629
34096 0.03600 4.03525 4.03525 1.46634 0.26236 1.09861 0.40547
34097 45 2.62394 3.31301 0.16145 3.21467 45 - -
34098 1.38629 1.38629 1.38629 1.38629
34099 0.01816 4.01742 * 1.46634 0.26236 0.00000 *
34100 //
34101 HMMER3/b [3.0 | March 2010]
34102 NAME 1_SSU_Tracheophyta_1_SSU_end_four_long
34103 LENG 45
34104 ALPH DNA
34105 RF no
34106 CS no
34107 MAP yes
34108 DATE Thu Feb 16 22:45:45 2012
34109 NSEQ 3
34110 EFFN 3.000000
34111 CKSUM 1668200381
34112 STATS LOCAL MSV -8.0335 0.72044
34113 STATS LOCAL VITERBI -7.6660 0.72044
34114 STATS LOCAL FORWARD -4.1391 0.72044
34115 HMM A C G T
34116 m->m m->i m->d i->m i->i d->m d->d
34117 COMPO 1.27287 1.70168 1.30718 1.32045
34118 1.38629 1.38629 1.38629 1.38629
34119 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
34120 1 0.15719 3.27118 2.73043 3.16274 1 - -
34121 1.38629 1.38629 1.38629 1.38629
34122 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34123 2 2.86982 3.47591 0.13017 3.36931 2 - -
34124 1.38629 1.38629 1.38629 1.38629
34125 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34126 3 2.97980 2.52563 3.03204 0.19727 3 - -
34127 1.38629 1.38629 1.38629 1.38629
34128 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34129 4 3.30705 0.14631 3.36166 2.73626 4 - -
34130 1.38629 1.38629 1.38629 1.38629
34131 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34132 5 2.86982 3.47591 0.13017 3.36931 5 - -
34133 1.38629 1.38629 1.38629 1.38629
34134 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34135 6 2.97980 2.52563 3.03204 0.19727 6 - -
34136 1.38629 1.38629 1.38629 1.38629
34137 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34138 7 0.15719 3.27118 2.73043 3.16274 7 - -
34139 1.38629 1.38629 1.38629 1.38629
34140 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34141 8 0.15719 3.27118 2.73043 3.16274 8 - -
34142 1.38629 1.38629 1.38629 1.38629
34143 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34144 9 3.30705 0.14631 3.36166 2.73626 9 - -
34145 1.38629 1.38629 1.38629 1.38629
34146 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34147 10 0.15719 3.27118 2.73043 3.16274 10 - -
34148 1.38629 1.38629 1.38629 1.38629
34149 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34150 11 0.15719 3.27118 2.73043 3.16274 11 - -
34151 1.38629 1.38629 1.38629 1.38629
34152 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34153 12 2.86982 3.47591 0.13017 3.36931 12 - -
34154 1.38629 1.38629 1.38629 1.38629
34155 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34156 13 2.86982 3.47591 0.13017 3.36931 13 - -
34157 1.38629 1.38629 1.38629 1.38629
34158 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34159 14 2.97980 2.52563 3.03204 0.19727 14 - -
34160 1.38629 1.38629 1.38629 1.38629
34161 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34162 15 0.15719 3.27118 2.73043 3.16274 15 - -
34163 1.38629 1.38629 1.38629 1.38629
34164 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34165 16 2.97980 2.52563 3.03204 0.19727 16 - -
34166 1.38629 1.38629 1.38629 1.38629
34167 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34168 17 3.30705 0.14631 3.36166 2.73626 17 - -
34169 1.38629 1.38629 1.38629 1.38629
34170 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34171 18 2.97980 2.52563 3.03204 0.19727 18 - -
34172 1.38629 1.38629 1.38629 1.38629
34173 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34174 19 2.86982 3.47591 0.13017 3.36931 19 - -
34175 1.38629 1.38629 1.38629 1.38629
34176 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34177 20 2.97980 2.52563 3.03204 0.19727 20 - -
34178 1.38629 1.38629 1.38629 1.38629
34179 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34180 21 0.15719 3.27118 2.73043 3.16274 21 - -
34181 1.38629 1.38629 1.38629 1.38629
34182 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34183 22 2.86982 3.47591 0.13017 3.36931 22 - -
34184 1.38629 1.38629 1.38629 1.38629
34185 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34186 23 2.86982 3.47591 0.13017 3.36931 23 - -
34187 1.38629 1.38629 1.38629 1.38629
34188 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34189 24 2.97980 2.52563 3.03204 0.19727 24 - -
34190 1.38629 1.38629 1.38629 1.38629
34191 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34192 25 2.86982 3.47591 0.13017 3.36931 25 - -
34193 1.38629 1.38629 1.38629 1.38629
34194 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34195 26 0.15719 3.27118 2.73043 3.16274 26 - -
34196 1.38629 1.38629 1.38629 1.38629
34197 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34198 27 0.15719 3.27118 2.73043 3.16274 27 - -
34199 1.38629 1.38629 1.38629 1.38629
34200 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34201 28 3.30705 0.14631 3.36166 2.73626 28 - -
34202 1.38629 1.38629 1.38629 1.38629
34203 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34204 29 3.30705 0.14631 3.36166 2.73626 29 - -
34205 1.38629 1.38629 1.38629 1.38629
34206 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34207 30 2.97980 2.52563 3.03204 0.19727 30 - -
34208 1.38629 1.38629 1.38629 1.38629
34209 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34210 31 2.86982 3.47591 0.13017 3.36931 31 - -
34211 1.38629 1.38629 1.38629 1.38629
34212 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34213 32 3.30705 0.14631 3.36166 2.73626 32 - -
34214 1.38629 1.38629 1.38629 1.38629
34215 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34216 33 0.15719 3.27118 2.73043 3.16274 33 - -
34217 1.38629 1.38629 1.38629 1.38629
34218 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34219 34 2.86982 3.47591 0.13017 3.36931 34 - -
34220 1.38629 1.38629 1.38629 1.38629
34221 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34222 35 0.15719 3.27118 2.73043 3.16274 35 - -
34223 1.38629 1.38629 1.38629 1.38629
34224 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34225 36 2.97980 2.52563 3.03204 0.19727 36 - -
34226 1.38629 1.38629 1.38629 1.38629
34227 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34228 37 2.86982 3.47591 0.13017 3.36931 37 - -
34229 1.38629 1.38629 1.38629 1.38629
34230 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34231 38 2.86982 3.47591 0.13017 3.36931 38 - -
34232 1.38629 1.38629 1.38629 1.38629
34233 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34234 39 0.15719 3.27118 2.73043 3.16274 39 - -
34235 1.38629 1.38629 1.38629 1.38629
34236 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34237 40 2.97980 2.52563 3.03204 0.19727 40 - -
34238 1.38629 1.38629 1.38629 1.38629
34239 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34240 41 3.30705 0.14631 3.36166 2.73626 41 - -
34241 1.38629 1.38629 1.38629 1.38629
34242 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34243 42 0.15719 3.27118 2.73043 3.16274 42 - -
34244 1.38629 1.38629 1.38629 1.38629
34245 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34246 43 2.97980 2.52563 3.03204 0.19727 43 - -
34247 1.38629 1.38629 1.38629 1.38629
34248 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34249 44 2.97980 2.52563 3.03204 0.19727 44 - -
34250 1.38629 1.38629 1.38629 1.38629
34251 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
34252 45 2.97980 2.52563 3.03204 0.19727 45 - -
34253 1.38629 1.38629 1.38629 1.38629
34254 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
34255 //
34256 HMMER3/b [3.0 | March 2010]
34257 NAME 1_SSU_Tracheophyta_1_SSU_end_one_long
34258 LENG 45
34259 ALPH DNA
34260 RF no
34261 CS no
34262 MAP yes
34263 DATE Thu Feb 16 22:45:21 2012
34264 NSEQ 2
34265 EFFN 2.000000
34266 CKSUM 3520144163
34267 STATS LOCAL MSV -7.4050 0.72803
34268 STATS LOCAL VITERBI -8.4014 0.72803
34269 STATS LOCAL FORWARD -3.3486 0.72803
34270 HMM A C G T
34271 m->m m->i m->d i->m i->i d->m d->d
34272 COMPO 1.23215 1.67157 1.30831 1.38588
34273 1.38629 1.38629 1.38629 1.38629
34274 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
34275 1 0.23862 2.84929 2.43386 2.70756 1 - -
34276 1.38629 1.38629 1.38629 1.38629
34277 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34278 2 2.53331 3.02441 0.20344 2.88069 2 - -
34279 1.38629 1.38629 1.38629 1.38629
34280 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34281 3 2.57915 2.25909 2.64442 0.28946 3 - -
34282 1.38629 1.38629 1.38629 1.38629
34283 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34284 4 2.57915 2.25909 2.64442 0.28946 4 - -
34285 1.38629 1.38629 1.38629 1.38629
34286 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34287 5 0.23862 2.84929 2.43386 2.70756 5 - -
34288 1.38629 1.38629 1.38629 1.38629
34289 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34290 6 2.57915 2.25909 2.64442 0.28946 6 - -
34291 1.38629 1.38629 1.38629 1.38629
34292 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34293 7 0.23862 2.84929 2.43386 2.70756 7 - -
34294 1.38629 1.38629 1.38629 1.38629
34295 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34296 8 0.23862 2.84929 2.43386 2.70756 8 - -
34297 1.38629 1.38629 1.38629 1.38629
34298 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34299 9 2.81865 0.23582 2.88868 2.35662 9 - -
34300 1.38629 1.38629 1.38629 1.38629
34301 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34302 10 0.23862 2.84929 2.43386 2.70756 10 - -
34303 1.38629 1.38629 1.38629 1.38629
34304 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34305 11 2.53331 3.02441 0.20344 2.88069 11 - -
34306 1.38629 1.38629 1.38629 1.38629
34307 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34308 12 2.53331 3.02441 0.20344 2.88069 12 - -
34309 1.38629 1.38629 1.38629 1.38629
34310 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34311 13 2.53331 3.02441 0.20344 2.88069 13 - -
34312 1.38629 1.38629 1.38629 1.38629
34313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34314 14 2.57915 2.25909 2.64442 0.28946 14 - -
34315 1.38629 1.38629 1.38629 1.38629
34316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34317 15 2.57915 2.25909 2.64442 0.28946 15 - -
34318 1.38629 1.38629 1.38629 1.38629
34319 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34320 16 2.57915 2.25909 2.64442 0.28946 16 - -
34321 1.38629 1.38629 1.38629 1.38629
34322 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34323 17 2.81865 0.23582 2.88868 2.35662 17 - -
34324 1.38629 1.38629 1.38629 1.38629
34325 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34326 18 2.81865 0.23582 2.88868 2.35662 18 - -
34327 1.38629 1.38629 1.38629 1.38629
34328 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34329 19 0.23862 2.84929 2.43386 2.70756 19 - -
34330 1.38629 1.38629 1.38629 1.38629
34331 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34332 20 2.57915 2.25909 2.64442 0.28946 20 - -
34333 1.38629 1.38629 1.38629 1.38629
34334 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34335 21 0.23862 2.84929 2.43386 2.70756 21 - -
34336 1.38629 1.38629 1.38629 1.38629
34337 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34338 22 2.53331 3.02441 0.20344 2.88069 22 - -
34339 1.38629 1.38629 1.38629 1.38629
34340 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34341 23 2.53331 3.02441 0.20344 2.88069 23 - -
34342 1.38629 1.38629 1.38629 1.38629
34343 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34344 24 2.57915 2.25909 2.64442 0.28946 24 - -
34345 1.38629 1.38629 1.38629 1.38629
34346 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34347 25 2.53331 3.02441 0.20344 2.88069 25 - -
34348 1.38629 1.38629 1.38629 1.38629
34349 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34350 26 0.23862 2.84929 2.43386 2.70756 26 - -
34351 1.38629 1.38629 1.38629 1.38629
34352 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34353 27 0.23862 2.84929 2.43386 2.70756 27 - -
34354 1.38629 1.38629 1.38629 1.38629
34355 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34356 28 2.81865 0.23582 2.88868 2.35662 28 - -
34357 1.38629 1.38629 1.38629 1.38629
34358 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34359 29 2.81865 0.23582 2.88868 2.35662 29 - -
34360 1.38629 1.38629 1.38629 1.38629
34361 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34362 30 2.57915 2.25909 2.64442 0.28946 30 - -
34363 1.38629 1.38629 1.38629 1.38629
34364 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34365 31 2.53331 3.02441 0.20344 2.88069 31 - -
34366 1.38629 1.38629 1.38629 1.38629
34367 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34368 32 2.81865 0.23582 2.88868 2.35662 32 - -
34369 1.38629 1.38629 1.38629 1.38629
34370 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34371 33 0.23862 2.84929 2.43386 2.70756 33 - -
34372 1.38629 1.38629 1.38629 1.38629
34373 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34374 34 2.53331 3.02441 0.20344 2.88069 34 - -
34375 1.38629 1.38629 1.38629 1.38629
34376 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34377 35 0.23862 2.84929 2.43386 2.70756 35 - -
34378 1.38629 1.38629 1.38629 1.38629
34379 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34380 36 0.23862 2.84929 2.43386 2.70756 36 - -
34381 1.38629 1.38629 1.38629 1.38629
34382 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34383 37 2.53331 3.02441 0.20344 2.88069 37 - -
34384 1.38629 1.38629 1.38629 1.38629
34385 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34386 38 2.53331 3.02441 0.20344 2.88069 38 - -
34387 1.38629 1.38629 1.38629 1.38629
34388 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34389 39 0.23862 2.84929 2.43386 2.70756 39 - -
34390 1.38629 1.38629 1.38629 1.38629
34391 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34392 40 2.57915 2.25909 2.64442 0.28946 40 - -
34393 1.38629 1.38629 1.38629 1.38629
34394 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34395 41 2.81865 0.23582 2.88868 2.35662 41 - -
34396 1.38629 1.38629 1.38629 1.38629
34397 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34398 42 0.23862 2.84929 2.43386 2.70756 42 - -
34399 1.38629 1.38629 1.38629 1.38629
34400 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34401 43 2.57915 2.25909 2.64442 0.28946 43 - -
34402 1.38629 1.38629 1.38629 1.38629
34403 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34404 44 2.57915 2.25909 2.64442 0.28946 44 - -
34405 1.38629 1.38629 1.38629 1.38629
34406 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34407 45 2.53331 3.02441 0.20344 2.88069 45 - -
34408 1.38629 1.38629 1.38629 1.38629
34409 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
34410 //
34411 HMMER3/b [3.0 | March 2010]
34412 NAME 1_SSU_Tracheophyta_1_SSU_end_three_long
34413 LENG 45
34414 ALPH DNA
34415 RF no
34416 CS no
34417 MAP yes
34418 DATE Thu Feb 16 22:45:36 2012
34419 NSEQ 4
34420 EFFN 3.269531
34421 CKSUM 1893084359
34422 STATS LOCAL MSV -8.0441 0.71933
34423 STATS LOCAL VITERBI -7.6633 0.71933
34424 STATS LOCAL FORWARD -4.3760 0.71933
34425 HMM A C G T
34426 m->m m->i m->d i->m i->i d->m d->d
34427 COMPO 1.34926 1.54473 1.18124 1.51276
34428 1.38629 1.38629 1.38629 1.38629
34429 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 *
34430 1 0.14418 3.36310 2.79076 3.26314 1 - -
34431 1.38629 1.38629 1.38629 1.38629
34432 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34433 2 2.93551 3.57031 0.11909 3.47317 2 - -
34434 1.38629 1.38629 1.38629 1.38629
34435 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34436 3 3.07131 2.58413 3.12013 0.18149 3 - -
34437 1.38629 1.38629 1.38629 1.38629
34438 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34439 4 3.41331 0.13259 3.46361 2.81457 4 - -
34440 1.38629 1.38629 1.38629 1.38629
34441 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34442 5 2.93551 3.57031 0.11909 3.47317 5 - -
34443 1.38629 1.38629 1.38629 1.38629
34444 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34445 6 3.07131 2.58413 3.12013 0.18149 6 - -
34446 1.38629 1.38629 1.38629 1.38629
34447 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34448 7 0.14418 3.36310 2.79076 3.26314 7 - -
34449 1.38629 1.38629 1.38629 1.38629
34450 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34451 8 0.14418 3.36310 2.79076 3.26314 8 - -
34452 1.38629 1.38629 1.38629 1.38629
34453 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34454 9 3.41331 0.13259 3.46361 2.81457 9 - -
34455 1.38629 1.38629 1.38629 1.38629
34456 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34457 10 0.14418 3.36310 2.79076 3.26314 10 - -
34458 1.38629 1.38629 1.38629 1.38629
34459 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34460 11 0.14418 3.36310 2.79076 3.26314 11 - -
34461 1.38629 1.38629 1.38629 1.38629
34462 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34463 12 2.93551 3.57031 0.11909 3.47317 12 - -
34464 1.38629 1.38629 1.38629 1.38629
34465 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34466 13 2.93551 3.57031 0.11909 3.47317 13 - -
34467 1.38629 1.38629 1.38629 1.38629
34468 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34469 14 3.07131 2.58413 3.12013 0.18149 14 - -
34470 1.38629 1.38629 1.38629 1.38629
34471 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34472 15 3.41331 0.13259 3.46361 2.81457 15 - -
34473 1.38629 1.38629 1.38629 1.38629
34474 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34475 16 3.07131 2.58413 3.12013 0.18149 16 - -
34476 1.38629 1.38629 1.38629 1.38629
34477 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34478 17 3.41331 0.13259 3.46361 2.81457 17 - -
34479 1.38629 1.38629 1.38629 1.38629
34480 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34481 18 3.41331 0.13259 3.46361 2.81457 18 - -
34482 1.38629 1.38629 1.38629 1.38629
34483 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34484 19 2.93551 3.57031 0.11909 3.47317 19 - -
34485 1.38629 1.38629 1.38629 1.38629
34486 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34487 20 3.07131 2.58413 3.12013 0.18149 20 - -
34488 1.38629 1.38629 1.38629 1.38629
34489 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34490 21 3.07131 2.58413 3.12013 0.18149 21 - -
34491 1.38629 1.38629 1.38629 1.38629
34492 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34493 22 2.93551 3.57031 0.11909 3.47317 22 - -
34494 1.38629 1.38629 1.38629 1.38629
34495 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34496 23 2.93551 3.57031 0.11909 3.47317 23 - -
34497 1.38629 1.38629 1.38629 1.38629
34498 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34499 24 3.07131 2.58413 3.12013 0.18149 24 - -
34500 1.38629 1.38629 1.38629 1.38629
34501 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34502 25 2.93551 3.57031 0.11909 3.47317 25 - -
34503 1.38629 1.38629 1.38629 1.38629
34504 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34505 26 0.14418 3.36310 2.79076 3.26314 26 - -
34506 1.38629 1.38629 1.38629 1.38629
34507 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34508 27 0.14418 3.36310 2.79076 3.26314 27 - -
34509 1.38629 1.38629 1.38629 1.38629
34510 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34511 28 3.41331 0.13259 3.46361 2.81457 28 - -
34512 1.38629 1.38629 1.38629 1.38629
34513 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34514 29 3.41331 0.13259 3.46361 2.81457 29 - -
34515 1.38629 1.38629 1.38629 1.38629
34516 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34517 30 0.40008 2.74926 1.64707 2.61530 30 - -
34518 1.38629 1.38629 1.38629 1.38629
34519 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34520 31 2.93551 3.57031 0.11909 3.47317 31 - -
34521 1.38629 1.38629 1.38629 1.38629
34522 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34523 32 3.41331 0.13259 3.46361 2.81457 32 - -
34524 1.38629 1.38629 1.38629 1.38629
34525 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34526 33 2.93551 3.57031 0.11909 3.47317 33 - -
34527 1.38629 1.38629 1.38629 1.38629
34528 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34529 34 2.93551 3.57031 0.11909 3.47317 34 - -
34530 1.38629 1.38629 1.38629 1.38629
34531 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34532 35 0.14418 3.36310 2.79076 3.26314 35 - -
34533 1.38629 1.38629 1.38629 1.38629
34534 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34535 36 2.93551 3.57031 0.11909 3.47317 36 - -
34536 1.38629 1.38629 1.38629 1.38629
34537 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34538 37 2.93551 3.57031 0.11909 3.47317 37 - -
34539 1.38629 1.38629 1.38629 1.38629
34540 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34541 38 2.93551 3.57031 0.11909 3.47317 38 - -
34542 1.38629 1.38629 1.38629 1.38629
34543 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34544 39 0.14418 3.36310 2.79076 3.26314 39 - -
34545 1.38629 1.38629 1.38629 1.38629
34546 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34547 40 3.07131 2.58413 3.12013 0.18149 40 - -
34548 1.38629 1.38629 1.38629 1.38629
34549 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34550 41 3.41331 0.13259 3.46361 2.81457 41 - -
34551 1.38629 1.38629 1.38629 1.38629
34552 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34553 42 0.14418 3.36310 2.79076 3.26314 42 - -
34554 1.38629 1.38629 1.38629 1.38629
34555 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34556 43 3.07131 2.58413 3.12013 0.18149 43 - -
34557 1.38629 1.38629 1.38629 1.38629
34558 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34559 44 3.07131 2.58413 3.12013 0.18149 44 - -
34560 1.38629 1.38629 1.38629 1.38629
34561 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547
34562 45 0.14418 3.36310 2.79076 3.26314 45 - -
34563 1.38629 1.38629 1.38629 1.38629
34564 0.01880 3.98333 * 1.46634 0.26236 0.00000 *
34565 //
34566 HMMER3/b [3.0 | March 2010]
34567 NAME 1_SSU_Tracheophyta_1_SSU_end_two_long
34568 LENG 45
34569 ALPH DNA
34570 RF no
34571 CS no
34572 MAP yes
34573 DATE Thu Feb 16 22:45:28 2012
34574 NSEQ 2
34575 EFFN 2.000000
34576 CKSUM 3574096921
34577 STATS LOCAL MSV -7.4187 0.72775
34578 STATS LOCAL VITERBI -8.3649 0.72775
34579 STATS LOCAL FORWARD -3.4400 0.72775
34580 HMM A C G T
34581 m->m m->i m->d i->m i->i d->m d->d
34582 COMPO 1.51814 1.52829 1.15981 1.38459
34583 1.38629 1.38629 1.38629 1.38629
34584 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
34585 1 2.53331 3.02441 0.20344 2.88069 1 - -
34586 1.38629 1.38629 1.38629 1.38629
34587 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34588 2 2.53331 3.02441 0.20344 2.88069 2 - -
34589 1.38629 1.38629 1.38629 1.38629
34590 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34591 3 2.57915 2.25909 2.64442 0.28946 3 - -
34592 1.38629 1.38629 1.38629 1.38629
34593 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34594 4 2.81865 0.23582 2.88868 2.35662 4 - -
34595 1.38629 1.38629 1.38629 1.38629
34596 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34597 5 2.53331 3.02441 0.20344 2.88069 5 - -
34598 1.38629 1.38629 1.38629 1.38629
34599 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34600 6 2.57915 2.25909 2.64442 0.28946 6 - -
34601 1.38629 1.38629 1.38629 1.38629
34602 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34603 7 0.23862 2.84929 2.43386 2.70756 7 - -
34604 1.38629 1.38629 1.38629 1.38629
34605 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34606 8 0.23862 2.84929 2.43386 2.70756 8 - -
34607 1.38629 1.38629 1.38629 1.38629
34608 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34609 9 2.81865 0.23582 2.88868 2.35662 9 - -
34610 1.38629 1.38629 1.38629 1.38629
34611 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34612 10 2.81865 0.23582 2.88868 2.35662 10 - -
34613 1.38629 1.38629 1.38629 1.38629
34614 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34615 11 2.57915 2.25909 2.64442 0.28946 11 - -
34616 1.38629 1.38629 1.38629 1.38629
34617 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34618 12 2.53331 3.02441 0.20344 2.88069 12 - -
34619 1.38629 1.38629 1.38629 1.38629
34620 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34621 13 2.53331 3.02441 0.20344 2.88069 13 - -
34622 1.38629 1.38629 1.38629 1.38629
34623 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34624 14 2.57915 2.25909 2.64442 0.28946 14 - -
34625 1.38629 1.38629 1.38629 1.38629
34626 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34627 15 2.57915 2.25909 2.64442 0.28946 15 - -
34628 1.38629 1.38629 1.38629 1.38629
34629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34630 16 2.57915 2.25909 2.64442 0.28946 16 - -
34631 1.38629 1.38629 1.38629 1.38629
34632 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34633 17 2.81865 0.23582 2.88868 2.35662 17 - -
34634 1.38629 1.38629 1.38629 1.38629
34635 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34636 18 2.81865 0.23582 2.88868 2.35662 18 - -
34637 1.38629 1.38629 1.38629 1.38629
34638 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34639 19 2.53331 3.02441 0.20344 2.88069 19 - -
34640 1.38629 1.38629 1.38629 1.38629
34641 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34642 20 2.57915 2.25909 2.64442 0.28946 20 - -
34643 1.38629 1.38629 1.38629 1.38629
34644 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34645 21 0.23862 2.84929 2.43386 2.70756 21 - -
34646 1.38629 1.38629 1.38629 1.38629
34647 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34648 22 2.53331 3.02441 0.20344 2.88069 22 - -
34649 1.38629 1.38629 1.38629 1.38629
34650 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34651 23 2.53331 3.02441 0.20344 2.88069 23 - -
34652 1.38629 1.38629 1.38629 1.38629
34653 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34654 24 2.57915 2.25909 2.64442 0.28946 24 - -
34655 1.38629 1.38629 1.38629 1.38629
34656 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34657 25 2.53331 3.02441 0.20344 2.88069 25 - -
34658 1.38629 1.38629 1.38629 1.38629
34659 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34660 26 0.23862 2.84929 2.43386 2.70756 26 - -
34661 1.38629 1.38629 1.38629 1.38629
34662 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34663 27 0.23862 2.84929 2.43386 2.70756 27 - -
34664 1.38629 1.38629 1.38629 1.38629
34665 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34666 28 2.81865 0.23582 2.88868 2.35662 28 - -
34667 1.38629 1.38629 1.38629 1.38629
34668 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34669 29 2.81865 0.23582 2.88868 2.35662 29 - -
34670 1.38629 1.38629 1.38629 1.38629
34671 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34672 30 2.57915 2.25909 2.64442 0.28946 30 - -
34673 1.38629 1.38629 1.38629 1.38629
34674 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34675 31 2.53331 3.02441 0.20344 2.88069 31 - -
34676 1.38629 1.38629 1.38629 1.38629
34677 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34678 32 2.81865 0.23582 2.88868 2.35662 32 - -
34679 1.38629 1.38629 1.38629 1.38629
34680 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34681 33 2.53331 3.02441 0.20344 2.88069 33 - -
34682 1.38629 1.38629 1.38629 1.38629
34683 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34684 34 2.53331 3.02441 0.20344 2.88069 34 - -
34685 1.38629 1.38629 1.38629 1.38629
34686 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34687 35 0.23862 2.84929 2.43386 2.70756 35 - -
34688 1.38629 1.38629 1.38629 1.38629
34689 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34690 36 0.23862 2.84929 2.43386 2.70756 36 - -
34691 1.38629 1.38629 1.38629 1.38629
34692 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34693 37 2.53331 3.02441 0.20344 2.88069 37 - -
34694 1.38629 1.38629 1.38629 1.38629
34695 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34696 38 2.53331 3.02441 0.20344 2.88069 38 - -
34697 1.38629 1.38629 1.38629 1.38629
34698 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34699 39 0.23862 2.84929 2.43386 2.70756 39 - -
34700 1.38629 1.38629 1.38629 1.38629
34701 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34702 40 2.57915 2.25909 2.64442 0.28946 40 - -
34703 1.38629 1.38629 1.38629 1.38629
34704 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34705 41 2.81865 0.23582 2.88868 2.35662 41 - -
34706 1.38629 1.38629 1.38629 1.38629
34707 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34708 42 0.23862 2.84929 2.43386 2.70756 42 - -
34709 1.38629 1.38629 1.38629 1.38629
34710 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34711 43 2.57915 2.25909 2.64442 0.28946 43 - -
34712 1.38629 1.38629 1.38629 1.38629
34713 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34714 44 2.57915 2.25909 2.64442 0.28946 44 - -
34715 1.38629 1.38629 1.38629 1.38629
34716 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
34717 45 2.53331 3.02441 0.20344 2.88069 45 - -
34718 1.38629 1.38629 1.38629 1.38629
34719 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
34720 //