Mercurial > repos > okorol > itsx
view ITSx_db/HMMs/M.hmm @ 7:d74a601111f2 draft
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| author | okorol |
|---|---|
| date | Fri, 05 Jun 2015 11:17:23 -0400 |
| parents | f82c70f54bd7 |
| children |
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HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:27 2012 NSEQ 2 EFFN 2.000000 CKSUM 2003464747 STATS LOCAL MSV -7.3950 0.72793 STATS LOCAL VITERBI -8.3145 0.72793 STATS LOCAL FORWARD -3.2953 0.72793 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58596 1.45659 1.21394 1.32730 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:01 2012 NSEQ 7 EFFN 3.072754 CKSUM 853724038 STATS LOCAL MSV -8.0712 0.71932 STATS LOCAL VITERBI -7.8377 0.71932 STATS LOCAL FORWARD -3.9153 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72598 1.06114 1.14871 1.83950 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 0.00000 * 1 2.88838 3.50239 0.12695 3.39840 1 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 2 3.33672 0.14232 3.39016 2.75827 2 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 3 3.33672 0.14232 3.39016 2.75827 3 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 4 3.33672 0.14232 3.39016 2.75827 4 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 5 0.15343 3.29681 2.74736 3.19071 5 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 6 0.15343 3.29681 2.74736 3.19071 6 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 7 2.88838 3.50239 0.12695 3.39840 7 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 8 2.88838 3.50239 0.12695 3.39840 8 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 9 0.15343 3.29681 2.74736 3.19071 9 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 10 3.00514 2.54188 3.05644 0.19274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 11 3.33672 0.14232 3.39016 2.75827 11 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 12 3.33672 0.14232 3.39016 2.75827 12 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 13 3.33672 0.14232 3.39016 2.75827 13 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 14 0.15343 3.29681 2.74736 3.19071 14 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 15 3.00514 2.54188 3.05644 0.19274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 16 3.00514 2.54188 3.05644 0.19274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 17 3.33672 0.14232 3.39016 2.75827 17 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 18 3.33672 0.14232 3.39016 2.75827 18 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 19 3.33672 0.14232 3.39016 2.75827 19 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 20 2.88838 3.50239 0.12695 3.39840 20 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 21 2.88838 3.50239 0.12695 3.39840 21 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 22 2.88838 3.50239 0.12695 3.39840 22 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 23 3.33672 0.14232 3.39016 2.75827 23 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 24 3.33672 0.14232 3.39016 2.75827 24 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 25 0.15343 3.29681 2.74736 3.19071 25 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 26 3.33672 0.14232 3.39016 2.75827 26 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 27 2.88838 3.50239 0.12695 3.39840 27 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 28 3.33672 0.14232 3.39016 2.75827 28 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 29 3.33672 0.14232 3.39016 2.75827 29 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 30 3.00514 2.54188 3.05644 0.19274 30 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 31 2.88838 3.50239 0.12695 3.39840 31 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 32 2.88838 3.50239 0.12695 3.39840 32 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 33 3.33672 0.14232 3.39016 2.75827 33 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 34 3.00514 2.54188 3.05644 0.19274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 35 2.88838 3.50239 0.12695 3.39840 35 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 36 0.15343 3.29681 2.74736 3.19071 36 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 37 2.88838 3.50239 0.12695 3.39840 37 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 38 2.88838 3.50239 0.12695 3.39840 38 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 39 2.88838 3.50239 0.12695 3.39840 39 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 40 3.33672 0.14232 3.39016 2.75827 40 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 41 0.15343 3.29681 2.74736 3.19071 41 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 42 2.88838 3.50239 0.12695 3.39840 42 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 43 2.88838 3.50239 0.12695 3.39840 43 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 44 3.33672 0.14232 3.39016 2.75827 44 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 45 3.00514 2.54188 3.05644 0.19274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01952 3.94599 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:50 2012 NSEQ 2 EFFN 2.000000 CKSUM 1769201338 STATS LOCAL MSV -7.4098 0.72868 STATS LOCAL VITERBI -8.2930 0.72868 STATS LOCAL FORWARD -3.7636 0.72868 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65755 1.56600 1.31765 1.10036 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.23862 2.84929 2.43386 2.70756 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenba_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:58 2012 NSEQ 12 EFFN 3.653320 CKSUM 2545005974 STATS LOCAL MSV -7.2478 0.71933 STATS LOCAL VITERBI -7.5667 0.71933 STATS LOCAL FORWARD -4.4610 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.90548 1.55415 1.18492 1.09628 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 0.00000 * 1 3.54821 0.11728 3.59264 2.91206 1 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 2 3.01623 3.68846 0.10671 3.60381 2 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 3 3.54821 0.11728 3.59264 2.91206 3 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 4 3.54821 0.11728 3.59264 2.91206 4 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 5 3.01623 3.68846 0.10671 3.60381 5 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 6 3.19097 2.66011 3.23517 0.16302 6 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 7 3.19097 2.66011 3.23517 0.16302 7 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 8 3.01623 3.68846 0.10671 3.60381 8 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 9 3.01623 3.68846 0.10671 3.60381 9 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 10 3.01623 3.68846 0.10671 3.60381 10 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 11 2.46397 0.95038 2.53528 0.80058 11 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 12 3.19097 2.66011 3.23517 0.16302 12 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 13 1.31721 2.20518 2.29020 0.65269 13 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 14 3.19097 2.66011 3.23517 0.16302 14 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 15 3.01623 3.68846 0.10671 3.60381 15 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 16 3.54821 0.11728 3.59264 2.91206 16 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 17 3.19097 2.66011 3.23517 0.16302 17 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 18 3.54821 0.11728 3.59264 2.91206 18 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 19 3.19097 2.66011 3.23517 0.16302 19 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 20 3.19097 2.66011 3.23517 0.16302 20 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 21 3.54821 0.11728 3.59264 2.91206 21 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 22 3.01623 3.68846 0.10671 3.60381 22 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 23 3.01623 3.68846 0.10671 3.60381 23 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 24 3.54821 0.11728 3.59264 2.91206 24 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 25 0.12934 3.48051 2.86668 3.39183 25 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 26 3.19097 2.66011 3.23517 0.16302 26 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 27 0.12934 3.48051 2.86668 3.39183 27 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 28 3.19097 2.66011 3.23517 0.16302 28 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 29 3.01623 3.68846 0.10671 3.60381 29 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 30 2.80925 1.82879 2.86859 0.32523 30 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 31 3.01623 3.68846 0.10671 3.60381 31 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 32 0.12934 3.48051 2.86668 3.39183 32 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 33 3.19097 2.66011 3.23517 0.16302 33 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 34 3.19097 2.66011 3.23517 0.16302 34 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 35 3.54821 0.11728 3.59264 2.91206 35 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 36 0.12934 3.48051 2.86668 3.39183 36 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 37 3.01623 3.68846 0.10671 3.60381 37 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 38 3.01623 3.68846 0.10671 3.60381 38 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 39 3.01623 3.68846 0.10671 3.60381 39 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 40 3.19097 2.66011 3.23517 0.16302 40 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 41 0.12934 3.48051 2.86668 3.39183 41 - - 1.38629 1.38629 1.38629 1.38629 0.14651 4.06959 2.12696 1.46634 0.26236 1.09861 0.40547 42 2.99921 2.53808 3.05074 0.19379 42 - - 1.38629 1.38629 1.38629 1.38629 0.03880 3.96188 3.96188 1.46634 0.26236 0.25204 1.50153 43 3.01623 3.68846 0.10671 3.60381 43 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 44 3.19097 2.66011 3.23517 0.16302 44 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06959 4.06959 1.46634 0.26236 1.09861 0.40547 45 3.19097 2.66011 3.23517 0.16302 45 - - 1.38629 1.38629 1.38629 1.38629 0.01753 4.05236 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenbb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:05 2012 NSEQ 2 EFFN 2.000000 CKSUM 2492946338 STATS LOCAL MSV -7.2784 0.72847 STATS LOCAL VITERBI -8.0968 0.72847 STATS LOCAL FORWARD -3.6372 0.72847 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73680 1.50236 1.26569 1.14173 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenbc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:12 2012 NSEQ 2 EFFN 2.000000 CKSUM 1326273846 STATS LOCAL MSV -7.2371 0.72835 STATS LOCAL VITERBI -8.2153 0.72835 STATS LOCAL FORWARD -3.6602 0.72835 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73864 1.44249 1.26678 1.18363 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenbd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:20 2012 NSEQ 2 EFFN 2.000000 CKSUM 3676096652 STATS LOCAL MSV -7.2130 0.72850 STATS LOCAL VITERBI -8.4369 0.72850 STATS LOCAL FORWARD -3.6712 0.72850 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81889 1.56574 1.21422 1.10287 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenbe_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:26 2012 NSEQ 9 EFFN 3.405762 CKSUM 2444157436 STATS LOCAL MSV -7.2647 0.71933 STATS LOCAL VITERBI -7.8111 0.71933 STATS LOCAL FORWARD -4.3285 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93599 1.45945 1.25584 1.08318 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 0.00000 * 1 3.46331 0.12666 3.51148 2.85093 1 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 2 2.96574 3.61431 0.11430 3.52175 2 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 3 3.46331 0.12666 3.51148 2.85093 3 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 4 3.11517 2.61202 3.16230 0.17445 4 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 5 3.46331 0.12666 3.51148 2.85093 5 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 6 3.11517 2.61202 3.16230 0.17445 6 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 7 3.11517 2.61202 3.16230 0.17445 7 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 8 2.96574 3.61431 0.11430 3.52175 8 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 9 2.96574 3.61431 0.11430 3.52175 9 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 10 2.96574 3.61431 0.11430 3.52175 10 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 11 3.46331 0.12666 3.51148 2.85093 11 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 12 3.11517 2.61202 3.16230 0.17445 12 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 13 3.11517 2.61202 3.16230 0.17445 13 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 14 3.11517 2.61202 3.16230 0.17445 14 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 15 2.96574 3.61431 0.11430 3.52175 15 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 16 3.46331 0.12666 3.51148 2.85093 16 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 17 3.11517 2.61202 3.16230 0.17445 17 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 18 3.46331 0.12666 3.51148 2.85093 18 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 19 3.11517 2.61202 3.16230 0.17445 19 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 20 3.11517 2.61202 3.16230 0.17445 20 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 21 2.96574 3.61431 0.11430 3.52175 21 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 22 0.13848 3.40650 2.81894 3.31066 22 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 23 2.96574 3.61431 0.11430 3.52175 23 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 24 3.46331 0.12666 3.51148 2.85093 24 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 25 0.13848 3.40650 2.81894 3.31066 25 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 26 3.11517 2.61202 3.16230 0.17445 26 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 27 0.13848 3.40650 2.81894 3.31066 27 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 28 3.11517 2.61202 3.16230 0.17445 28 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 29 2.71342 0.39696 2.78195 1.61237 29 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 30 3.46331 0.12666 3.51148 2.85093 30 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 31 2.96574 3.61431 0.11430 3.52175 31 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 32 0.13848 3.40650 2.81894 3.31066 32 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 33 3.11517 2.61202 3.16230 0.17445 33 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 34 3.11517 2.61202 3.16230 0.17445 34 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 35 3.46331 0.12666 3.51148 2.85093 35 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 36 0.13848 3.40650 2.81894 3.31066 36 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 37 2.96574 3.61431 0.11430 3.52175 37 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 38 2.96574 3.61431 0.11430 3.52175 38 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 39 2.96574 3.61431 0.11430 3.52175 39 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 40 3.11517 2.61202 3.16230 0.17445 40 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 41 2.96574 3.61431 0.11430 3.52175 41 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 42 3.11517 2.61202 3.16230 0.17445 42 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 43 2.96574 3.61431 0.11430 3.52175 43 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 44 3.11517 2.61202 3.16230 0.17445 44 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 45 3.11517 2.61202 3.16230 0.17445 45 - - 1.38629 1.38629 1.38629 1.38629 0.01833 4.00838 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenbf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:32 2012 NSEQ 2 EFFN 2.000000 CKSUM 4109347638 STATS LOCAL MSV -7.5168 0.72888 STATS LOCAL VITERBI -8.4209 0.72888 STATS LOCAL FORWARD -3.5664 0.72888 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73750 1.49258 1.37811 1.05788 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_elevenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:41 2012 NSEQ 2 EFFN 2.000000 CKSUM 3825414869 STATS LOCAL MSV -7.2301 0.72872 STATS LOCAL VITERBI -8.2274 0.72872 STATS LOCAL FORWARD -3.6065 0.72872 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73305 1.63696 1.26224 1.06228 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:34 2012 NSEQ 16 EFFN 3.605469 CKSUM 3791217549 STATS LOCAL MSV -7.3241 0.71932 STATS LOCAL VITERBI -7.7948 0.71932 STATS LOCAL FORWARD -4.2664 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47195 1.82456 1.19451 1.18292 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 0.00000 * 1 0.13100 3.46667 2.85777 3.37664 1 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 2 3.17670 2.65106 3.22145 0.16511 2 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 3 0.13100 3.46667 2.85777 3.37664 3 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 4 3.17670 2.65106 3.22145 0.16511 4 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 5 3.17670 2.65106 3.22145 0.16511 5 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 6 3.53238 0.11897 3.57752 2.90072 6 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 7 0.13100 3.46667 2.85777 3.37664 7 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 8 2.85850 0.32833 2.92410 1.77901 8 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 9 0.13100 3.46667 2.85777 3.37664 9 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 10 0.47160 2.71742 1.45125 2.58134 10 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 11 1.43022 2.74775 0.47311 2.60899 11 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 12 3.00689 3.67468 0.10808 3.58855 12 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 13 3.17670 2.65106 3.22145 0.16511 13 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 14 3.53238 0.11897 3.57752 2.90072 14 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 15 3.17670 2.65106 3.22145 0.16511 15 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 16 3.00689 3.67468 0.10808 3.58855 16 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 17 3.17670 2.65106 3.22145 0.16511 17 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 18 3.00689 3.67468 0.10808 3.58855 18 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 19 3.17670 2.65106 3.22145 0.16511 19 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 20 3.00689 3.67468 0.10808 3.58855 20 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 21 3.00689 3.67468 0.10808 3.58855 21 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 22 3.00689 3.67468 0.10808 3.58855 22 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 23 3.00689 3.67468 0.10808 3.58855 23 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 24 3.17670 2.65106 3.22145 0.16511 24 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 25 0.13100 3.46667 2.85777 3.37664 25 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 26 3.53238 0.11897 3.57752 2.90072 26 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 27 0.13100 3.46667 2.85777 3.37664 27 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 28 3.53238 0.11897 3.57752 2.90072 28 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 29 0.13100 3.46667 2.85777 3.37664 29 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 30 3.17670 2.65106 3.22145 0.16511 30 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 31 3.00689 3.67468 0.10808 3.58855 31 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 32 3.00689 3.67468 0.10808 3.58855 32 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 33 3.17670 2.65106 3.22145 0.16511 33 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 34 3.17670 2.65106 3.22145 0.16511 34 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 35 3.00689 3.67468 0.10808 3.58855 35 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 36 0.13100 3.46667 2.85777 3.37664 36 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 37 3.00689 3.67468 0.10808 3.58855 37 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 38 3.17670 2.65106 3.22145 0.16511 38 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 39 3.00689 3.67468 0.10808 3.58855 39 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 40 3.17670 2.65106 3.22145 0.16511 40 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 41 3.53238 0.11897 3.57752 2.90072 41 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 42 3.00689 3.67468 0.10808 3.58855 42 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 43 3.17670 2.65106 3.22145 0.16511 43 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 44 3.17670 2.65106 3.22145 0.16511 44 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 45 0.13100 3.46667 2.85777 3.37664 45 - - 1.38629 1.38629 1.38629 1.38629 0.01768 4.04401 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fifty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:51:15 2012 NSEQ 2 EFFN 2.000000 CKSUM 1066684627 STATS LOCAL MSV -7.5812 0.72751 STATS LOCAL VITERBI -8.5194 0.72751 STATS LOCAL FORWARD -3.2857 0.72751 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92302 1.24002 1.12282 1.43089 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:34:26 2012 NSEQ 15 EFFN 3.533936 CKSUM 1571947734 STATS LOCAL MSV -7.1684 0.71932 STATS LOCAL VITERBI -7.7256 0.71932 STATS LOCAL FORWARD -4.1697 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65608 1.33859 1.13998 1.48248 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 0.00000 * 1 2.99255 3.65360 0.11020 3.56520 1 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 2 3.50820 0.12160 3.55441 2.88335 2 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 3 3.50820 0.12160 3.55441 2.88335 3 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 4 2.10974 3.16236 0.23737 3.04268 4 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 5 3.15503 2.63732 3.20062 0.16833 5 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 6 0.13357 3.44557 2.84418 3.35349 6 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 7 2.99255 3.65360 0.11020 3.56520 7 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 8 2.99255 3.65360 0.11020 3.56520 8 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 9 0.13357 3.44557 2.84418 3.35349 9 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 10 2.51458 2.79731 0.31083 2.07712 10 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 11 3.15503 2.63732 3.20062 0.16833 11 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 12 3.50820 0.12160 3.55441 2.88335 12 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 13 3.50820 0.12160 3.55441 2.88335 13 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 14 3.15503 2.63732 3.20062 0.16833 14 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 15 0.13357 3.44557 2.84418 3.35349 15 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 16 2.99970 0.26047 3.06184 2.01961 16 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 17 3.50820 0.12160 3.55441 2.88335 17 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 18 3.50820 0.12160 3.55441 2.88335 18 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 19 3.15503 2.63732 3.20062 0.16833 19 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 20 0.53351 2.65200 1.33972 2.51297 20 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 21 2.95831 0.27708 3.02151 1.95635 21 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 22 2.99255 3.65360 0.11020 3.56520 22 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 23 2.99255 3.65360 0.11020 3.56520 23 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 24 3.50820 0.12160 3.55441 2.88335 24 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 25 0.13357 3.44557 2.84418 3.35349 25 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 26 3.50820 0.12160 3.55441 2.88335 26 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 27 0.13357 3.44557 2.84418 3.35349 27 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 28 3.15503 2.63732 3.20062 0.16833 28 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 29 3.50820 0.12160 3.55441 2.88335 29 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 30 3.15503 2.63732 3.20062 0.16833 30 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 31 2.99255 3.65360 0.11020 3.56520 31 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 32 2.99255 3.65360 0.11020 3.56520 32 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 33 3.15503 2.63732 3.20062 0.16833 33 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 34 3.15503 2.63732 3.20062 0.16833 34 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 35 2.99255 3.65360 0.11020 3.56520 35 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 36 0.13357 3.44557 2.84418 3.35349 36 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 37 2.99255 3.65360 0.11020 3.56520 37 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 38 2.99255 3.65360 0.11020 3.56520 38 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 39 2.99255 3.65360 0.11020 3.56520 39 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 40 3.15503 2.63732 3.20062 0.16833 40 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 41 3.50820 0.12160 3.55441 2.88335 41 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 42 2.99255 3.65360 0.11020 3.56520 42 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 43 3.15503 2.63732 3.20062 0.16833 43 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 44 2.99255 3.65360 0.11020 3.56520 44 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04899 4.04899 1.46634 0.26236 1.09861 0.40547 45 0.13357 3.44557 2.84418 3.35349 45 - - 1.38629 1.38629 1.38629 1.38629 0.01791 4.03139 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortya_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 347263349 STATS LOCAL MSV -7.4224 0.72886 STATS LOCAL VITERBI -8.2750 0.72886 STATS LOCAL FORWARD -3.5290 0.72886 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51640 1.56418 1.43422 1.09980 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:12 2012 NSEQ 21 EFFN 3.652954 CKSUM 2037448344 STATS LOCAL MSV -7.7448 0.71932 STATS LOCAL VITERBI -7.7103 0.71932 STATS LOCAL FORWARD -4.4879 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34393 1.57885 1.68779 1.05544 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 0.00000 * 1 3.54809 0.11729 3.59253 2.91198 1 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 2 0.12935 3.48040 2.86661 3.39172 2 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 3 2.63410 1.48888 2.69945 0.45358 3 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 4 3.01616 3.68835 0.10672 3.60370 4 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 5 3.01616 3.68835 0.10672 3.60370 5 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 6 0.12935 3.48040 2.86661 3.39172 6 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 7 3.54809 0.11729 3.59253 2.91198 7 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 8 0.12935 3.48040 2.86661 3.39172 8 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 9 3.54809 0.11729 3.59253 2.91198 9 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 10 3.19086 2.66004 3.23506 0.16304 10 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 11 3.19086 2.66004 3.23506 0.16304 11 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 12 3.54809 0.11729 3.59253 2.91198 12 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 13 2.67383 2.44140 2.20688 0.30934 13 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 14 3.01616 3.68835 0.10672 3.60370 14 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 15 3.19086 2.66004 3.23506 0.16304 15 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 16 0.30858 2.96134 1.86288 2.83816 16 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 17 3.19086 2.66004 3.23506 0.16304 17 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 18 3.54809 0.11729 3.59253 2.91198 18 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 19 3.19086 2.66004 3.23506 0.16304 19 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 20 3.01616 3.68835 0.10672 3.60370 20 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 21 3.19086 2.66004 3.23506 0.16304 21 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 22 3.01616 3.68835 0.10672 3.60370 22 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 23 3.54809 0.11729 3.59253 2.91198 23 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 24 3.19086 2.66004 3.23506 0.16304 24 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 25 0.12935 3.48040 2.86661 3.39172 25 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 26 3.54809 0.11729 3.59253 2.91198 26 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 27 0.12935 3.48040 2.86661 3.39172 27 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 28 3.19086 2.66004 3.23506 0.16304 28 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 29 3.19086 2.66004 3.23506 0.16304 29 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 30 3.19086 2.66004 3.23506 0.16304 30 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 31 3.01616 3.68835 0.10672 3.60370 31 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 32 3.19086 2.66004 3.23506 0.16304 32 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 33 3.19086 2.66004 3.23506 0.16304 33 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 34 3.19086 2.66004 3.23506 0.16304 34 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 35 3.54809 0.11729 3.59253 2.91198 35 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 36 0.12935 3.48040 2.86661 3.39172 36 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 37 3.01616 3.68835 0.10672 3.60370 37 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 38 3.19086 2.66004 3.23506 0.16304 38 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 39 0.12935 3.48040 2.86661 3.39172 39 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 40 3.19086 2.66004 3.23506 0.16304 40 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 41 0.12935 3.48040 2.86661 3.39172 41 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 42 3.19086 2.66004 3.23506 0.16304 42 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 43 0.12935 3.48040 2.86661 3.39172 43 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 44 0.12935 3.48040 2.86661 3.39172 44 - - 1.38629 1.38629 1.38629 1.38629 0.03477 4.06953 4.06953 1.46634 0.26236 1.09861 0.40547 45 0.12935 3.48040 2.86661 3.39172 45 - - 1.38629 1.38629 1.38629 1.38629 0.01754 4.05230 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:18 2012 NSEQ 2 EFFN 2.000000 CKSUM 1875509194 STATS LOCAL MSV -7.4593 0.72883 STATS LOCAL VITERBI -8.2848 0.72883 STATS LOCAL FORWARD -3.4483 0.72883 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45589 1.50091 1.49628 1.13969 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 2094167418 STATS LOCAL MSV -7.2815 0.72957 STATS LOCAL VITERBI -8.1713 0.72957 STATS LOCAL FORWARD -3.4471 0.72957 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21312 1.69555 1.55125 1.18009 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 1.01448 1.11006 1.95471 1.79419 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortye_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:29 2012 NSEQ 3 EFFN 3.000000 CKSUM 3941219966 STATS LOCAL MSV -8.0155 0.72136 STATS LOCAL VITERBI -7.9080 0.72136 STATS LOCAL FORWARD -3.8167 0.72136 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38221 1.76473 1.47045 1.05577 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 1.34853 2.58976 0.54705 2.44542 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.86982 3.47591 0.13017 3.36931 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.97980 2.52563 3.03204 0.19727 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeighta_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:28 2012 NSEQ 24 EFFN 3.600586 CKSUM 339122880 STATS LOCAL MSV -7.1812 0.71931 STATS LOCAL VITERBI -7.6039 0.71931 STATS LOCAL FORWARD -4.3803 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.90120 1.55283 1.08317 1.20250 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 0.00000 * 1 2.67626 3.05106 0.22851 2.42866 1 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 2 3.00592 3.67326 0.10822 3.58698 2 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 3 3.53074 0.11914 3.57596 2.89955 3 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 4 3.00592 3.67326 0.10822 3.58698 4 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 5 3.53074 0.11914 3.57596 2.89955 5 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 6 3.17523 2.65013 3.22004 0.16532 6 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 7 3.53074 0.11914 3.57596 2.89955 7 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 8 3.17523 2.65013 3.22004 0.16532 8 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 9 2.54397 0.59494 2.61524 1.21503 9 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 10 3.00592 3.67326 0.10822 3.58698 10 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 11 3.00592 3.67326 0.10822 3.58698 11 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 12 3.17523 2.65013 3.22004 0.16532 12 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 13 2.94163 2.11334 2.99577 0.25310 13 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 14 0.13117 3.46525 2.85686 3.37508 14 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 15 3.17523 2.65013 3.22004 0.16532 15 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 16 0.13117 3.46525 2.85686 3.37508 16 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 17 3.53074 0.11914 3.57596 2.89955 17 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 18 3.53074 0.11914 3.57596 2.89955 18 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 19 3.00592 3.67326 0.10822 3.58698 19 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 20 3.00592 3.67326 0.10822 3.58698 20 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 21 3.00592 3.67326 0.10822 3.58698 21 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 22 0.13117 3.46525 2.85686 3.37508 22 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 23 3.00592 3.67326 0.10822 3.58698 23 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 24 3.53074 0.11914 3.57596 2.89955 24 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 25 0.13117 3.46525 2.85686 3.37508 25 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 26 3.17523 2.65013 3.22004 0.16532 26 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 27 3.00592 3.67326 0.10822 3.58698 27 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 28 3.17523 2.65013 3.22004 0.16532 28 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 29 3.53074 0.11914 3.57596 2.89955 29 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 30 3.17523 2.65013 3.22004 0.16532 30 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 31 3.00592 3.67326 0.10822 3.58698 31 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 32 3.17523 2.65013 3.22004 0.16532 32 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 33 3.53074 0.11914 3.57596 2.89955 33 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 34 3.17523 2.65013 3.22004 0.16532 34 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 35 3.00592 3.67326 0.10822 3.58698 35 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 36 0.13117 3.46525 2.85686 3.37508 36 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 37 3.00592 3.67326 0.10822 3.58698 37 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 38 3.17523 2.65013 3.22004 0.16532 38 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 39 3.00592 3.67326 0.10822 3.58698 39 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 40 3.17523 2.65013 3.22004 0.16532 40 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 41 3.17523 2.65013 3.22004 0.16532 41 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 42 3.00592 3.67326 0.10822 3.58698 42 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 43 3.00592 3.67326 0.10822 3.58698 43 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 44 3.17523 2.65013 3.22004 0.16532 44 - - 1.38629 1.38629 1.38629 1.38629 0.03509 4.06054 4.06054 1.46634 0.26236 1.09861 0.40547 45 1.27511 2.19060 2.26638 0.68307 45 - - 1.38629 1.38629 1.38629 1.38629 0.01770 4.04315 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeightb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:35 2012 NSEQ 2 EFFN 2.000000 CKSUM 3925285296 STATS LOCAL MSV -7.6206 0.72748 STATS LOCAL VITERBI -8.1867 0.72748 STATS LOCAL FORWARD -3.4877 0.72748 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.83239 1.19294 1.16979 1.48630 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeightc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:39 2012 NSEQ 5 EFFN 3.159180 CKSUM 993596914 STATS LOCAL MSV -8.2623 0.71933 STATS LOCAL VITERBI -7.7665 0.71933 STATS LOCAL FORWARD -4.2175 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92935 1.26519 1.09230 1.43915 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 0.00000 * 1 2.90962 3.53288 0.12335 3.43193 1 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 2 2.90962 3.53288 0.12335 3.43193 2 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 3 3.37101 0.13787 3.42306 2.78357 3 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 4 2.90962 3.53288 0.12335 3.43193 4 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 5 3.37101 0.13787 3.42306 2.78357 5 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 6 3.03462 2.56074 3.08483 0.18763 6 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 7 3.37101 0.13787 3.42306 2.78357 7 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 8 3.03462 2.56074 3.08483 0.18763 8 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 9 3.37101 0.13787 3.42306 2.78357 9 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 10 2.90962 3.53288 0.12335 3.43193 10 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 11 2.90962 3.53288 0.12335 3.43193 11 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 12 3.03462 2.56074 3.08483 0.18763 12 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 13 3.37101 0.13787 3.42306 2.78357 13 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 14 0.14921 3.32646 2.76683 3.22308 14 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 15 0.14921 3.32646 2.76683 3.22308 15 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 16 2.90962 3.53288 0.12335 3.43193 16 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 17 3.37101 0.13787 3.42306 2.78357 17 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 18 3.37101 0.13787 3.42306 2.78357 18 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 19 2.90962 3.53288 0.12335 3.43193 19 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 20 2.90962 3.53288 0.12335 3.43193 20 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 21 2.90962 3.53288 0.12335 3.43193 21 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 22 0.14921 3.32646 2.76683 3.22308 22 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 23 2.90962 3.53288 0.12335 3.43193 23 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 24 3.37101 0.13787 3.42306 2.78357 24 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 25 0.14921 3.32646 2.76683 3.22308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 26 3.37101 0.13787 3.42306 2.78357 26 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 27 2.90962 3.53288 0.12335 3.43193 27 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 28 3.03462 2.56074 3.08483 0.18763 28 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 29 3.37101 0.13787 3.42306 2.78357 29 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 30 3.03462 2.56074 3.08483 0.18763 30 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 31 2.90962 3.53288 0.12335 3.43193 31 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 32 3.03462 2.56074 3.08483 0.18763 32 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 33 3.37101 0.13787 3.42306 2.78357 33 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 34 3.03462 2.56074 3.08483 0.18763 34 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 35 2.90962 3.53288 0.12335 3.43193 35 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 36 0.14921 3.32646 2.76683 3.22308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 37 2.90962 3.53288 0.12335 3.43193 37 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 38 3.37101 0.13787 3.42306 2.78357 38 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 39 2.90962 3.53288 0.12335 3.43193 39 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 40 3.03462 2.56074 3.08483 0.18763 40 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 41 3.37101 0.13787 3.42306 2.78357 41 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 42 3.03462 2.56074 3.08483 0.18763 42 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 43 2.90962 3.53288 0.12335 3.43193 43 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 44 3.03462 2.56074 3.08483 0.18763 44 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 45 3.03462 2.56074 3.08483 0.18763 45 - - 1.38629 1.38629 1.38629 1.38629 0.01920 3.96256 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeightd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:46 2012 NSEQ 4 EFFN 3.472656 CKSUM 2657486391 STATS LOCAL MSV -7.5605 0.71932 STATS LOCAL VITERBI -7.7169 0.71932 STATS LOCAL FORWARD -4.4119 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.88361 1.29724 1.11506 1.39926 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 0.00000 * 1 2.97992 3.63506 0.11211 3.54469 1 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 2 2.97992 3.63506 0.11211 3.54469 2 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 3 3.48700 0.12396 3.53414 2.86806 3 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 4 2.97992 3.63506 0.11211 3.54469 4 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 5 3.48700 0.12396 3.53414 2.86806 5 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 6 3.13614 2.62533 3.18246 0.17120 6 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 7 3.13614 2.62533 3.18246 0.17120 7 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 8 3.13614 2.62533 3.18246 0.17120 8 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 9 3.48700 0.12396 3.53414 2.86806 9 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 10 2.97992 3.63506 0.11211 3.54469 10 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 11 2.97992 3.63506 0.11211 3.54469 11 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 12 3.13614 2.62533 3.18246 0.17120 12 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 13 0.13586 3.42710 2.83226 3.33324 13 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 14 0.13586 3.42710 2.83226 3.33324 14 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 15 0.83642 2.54006 0.92443 2.39556 15 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 16 2.97992 3.63506 0.11211 3.54469 16 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 17 3.48700 0.12396 3.53414 2.86806 17 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 18 3.48700 0.12396 3.53414 2.86806 18 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 19 2.97992 3.63506 0.11211 3.54469 19 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 20 2.97992 3.63506 0.11211 3.54469 20 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 21 2.97992 3.63506 0.11211 3.54469 21 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 22 0.13586 3.42710 2.83226 3.33324 22 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 23 2.97992 3.63506 0.11211 3.54469 23 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 24 3.48700 0.12396 3.53414 2.86806 24 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 25 0.13586 3.42710 2.83226 3.33324 25 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 26 3.48700 0.12396 3.53414 2.86806 26 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 27 2.97992 3.63506 0.11211 3.54469 27 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 28 3.13614 2.62533 3.18246 0.17120 28 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 29 3.48700 0.12396 3.53414 2.86806 29 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 30 3.13614 2.62533 3.18246 0.17120 30 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 31 2.97992 3.63506 0.11211 3.54469 31 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 32 3.13614 2.62533 3.18246 0.17120 32 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 33 3.48700 0.12396 3.53414 2.86806 33 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 34 3.13614 2.62533 3.18246 0.17120 34 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 35 2.97992 3.63506 0.11211 3.54469 35 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 36 0.13586 3.42710 2.83226 3.33324 36 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 37 2.97992 3.63506 0.11211 3.54469 37 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 38 3.48700 0.12396 3.53414 2.86806 38 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 39 2.97992 3.63506 0.11211 3.54469 39 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 40 3.13614 2.62533 3.18246 0.17120 40 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 41 3.48700 0.12396 3.53414 2.86806 41 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 42 3.48700 0.12396 3.53414 2.86806 42 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 43 2.62567 1.55366 2.69076 0.43339 43 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 44 2.62567 1.55366 2.69076 0.43339 44 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 45 3.13614 2.62533 3.18246 0.17120 45 - - 1.38629 1.38629 1.38629 1.38629 0.01811 4.02046 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeighte_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:51 2012 NSEQ 8 EFFN 3.214844 CKSUM 964389477 STATS LOCAL MSV -8.0488 0.71933 STATS LOCAL VITERBI -7.8773 0.71933 STATS LOCAL FORWARD -4.3191 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.19308 1.31777 1.09283 1.25376 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 2.92285 3.55196 0.12115 3.45295 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 2.92285 3.55196 0.12115 3.45295 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 3.39256 0.13515 3.44371 2.79938 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 2.92285 3.55196 0.12115 3.45295 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 3.39256 0.13515 3.44371 2.79938 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 3.05326 2.57263 3.10276 0.18448 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 3.39256 0.13515 3.44371 2.79938 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 3.05326 2.57263 3.10276 0.18448 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.39256 0.13515 3.44371 2.79938 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 2.92285 3.55196 0.12115 3.45295 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 2.92285 3.55196 0.12115 3.45295 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 3.05326 2.57263 3.10276 0.18448 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 3.05326 2.57263 3.10276 0.18448 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.05326 2.57263 3.10276 0.18448 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.05326 2.57263 3.10276 0.18448 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 2.92285 3.55196 0.12115 3.45295 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 3.39256 0.13515 3.44371 2.79938 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 3.39256 0.13515 3.44371 2.79938 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 2.92285 3.55196 0.12115 3.45295 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 2.92285 3.55196 0.12115 3.45295 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 2.92285 3.55196 0.12115 3.45295 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 0.14663 3.34511 2.77903 3.24347 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 2.92285 3.55196 0.12115 3.45295 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 3.39256 0.13515 3.44371 2.79938 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 0.14663 3.34511 2.77903 3.24347 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.39256 0.13515 3.44371 2.79938 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 2.92285 3.55196 0.12115 3.45295 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.05326 2.57263 3.10276 0.18448 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.05326 2.57263 3.10276 0.18448 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 2.92285 3.55196 0.12115 3.45295 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 3.05326 2.57263 3.10276 0.18448 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.39256 0.13515 3.44371 2.79938 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 3.05326 2.57263 3.10276 0.18448 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 2.92285 3.55196 0.12115 3.45295 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 0.14663 3.34511 2.77903 3.24347 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 2.92285 3.55196 0.12115 3.45295 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.39256 0.13515 3.44371 2.79938 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 2.92285 3.55196 0.12115 3.45295 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 3.05326 2.57263 3.10276 0.18448 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 3.05326 2.57263 3.10276 0.18448 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 3.39256 0.13515 3.44371 2.79938 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 2.92285 3.55196 0.12115 3.45295 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 3.05326 2.57263 3.10276 0.18448 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 3.05326 2.57263 3.10276 0.18448 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyeightf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:56 2012 NSEQ 11 EFFN 3.316650 CKSUM 2204535920 STATS LOCAL MSV -8.0261 0.71932 STATS LOCAL VITERBI -7.9269 0.71932 STATS LOCAL FORWARD -4.2355 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.86940 1.25480 1.19492 1.35510 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 * 1 2.94618 3.58579 0.11737 3.49026 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 2 2.94618 3.58579 0.11737 3.49026 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 3 3.43088 0.13047 3.48043 2.82738 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 4 2.94618 3.58579 0.11737 3.49026 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 5 3.43088 0.13047 3.48043 2.82738 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 6 3.08666 2.59390 3.13489 0.17899 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 7 3.43088 0.13047 3.48043 2.82738 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 8 3.08666 2.59390 3.13489 0.17899 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 9 3.43088 0.13047 3.48043 2.82738 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 10 2.94618 3.58579 0.11737 3.49026 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 11 2.94618 3.58579 0.11737 3.49026 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 12 3.08666 2.59390 3.13489 0.17899 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 13 3.08666 2.59390 3.13489 0.17899 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 14 3.08666 2.59390 3.13489 0.17899 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 15 3.43088 0.13047 3.48043 2.82738 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 16 0.14215 3.37833 2.80067 3.27981 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 17 3.43088 0.13047 3.48043 2.82738 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 18 3.43088 0.13047 3.48043 2.82738 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 19 2.94618 3.58579 0.11737 3.49026 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 20 2.94618 3.58579 0.11737 3.49026 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 21 2.94618 3.58579 0.11737 3.49026 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 22 0.14215 3.37833 2.80067 3.27981 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 23 2.94618 3.58579 0.11737 3.49026 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 24 3.43088 0.13047 3.48043 2.82738 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 25 0.14215 3.37833 2.80067 3.27981 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 26 3.43088 0.13047 3.48043 2.82738 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 27 2.94618 3.58579 0.11737 3.49026 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 28 3.08666 2.59390 3.13489 0.17899 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 29 3.43088 0.13047 3.48043 2.82738 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 30 3.08666 2.59390 3.13489 0.17899 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 31 2.94618 3.58579 0.11737 3.49026 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 32 3.08666 2.59390 3.13489 0.17899 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 33 3.43088 0.13047 3.48043 2.82738 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 34 3.08666 2.59390 3.13489 0.17899 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 35 2.94618 3.58579 0.11737 3.49026 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 36 0.14215 3.37833 2.80067 3.27981 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 37 2.94618 3.58579 0.11737 3.49026 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 38 3.43088 0.13047 3.48043 2.82738 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 39 0.14215 3.37833 2.80067 3.27981 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 40 3.08666 2.59390 3.13489 0.17899 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 41 3.08666 2.59390 3.13489 0.17899 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 42 3.43088 0.13047 3.48043 2.82738 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 43 2.94618 3.58579 0.11737 3.49026 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 44 0.57713 2.32692 2.24167 1.44981 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 45 3.08666 2.59390 3.13489 0.17899 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:50 2012 NSEQ 4 EFFN 3.167969 CKSUM 3104217627 STATS LOCAL MSV -8.1787 0.71934 STATS LOCAL VITERBI -7.9801 0.71934 STATS LOCAL FORWARD -3.9468 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.19556 1.04296 1.09808 1.59562 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 * 1 3.37444 0.13743 3.42635 2.78609 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 2 2.91173 3.53592 0.12299 3.43528 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 3 3.37444 0.13743 3.42635 2.78609 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 4 2.56050 1.56301 2.62680 0.44485 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 5 3.37444 0.13743 3.42635 2.78609 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 6 3.37444 0.13743 3.42635 2.78609 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 7 3.37444 0.13743 3.42635 2.78609 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 8 2.91173 3.53592 0.12299 3.43528 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 9 2.91173 3.53592 0.12299 3.43528 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 10 2.91173 3.53592 0.12299 3.43528 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 11 2.91173 3.53592 0.12299 3.43528 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 12 3.03758 2.56263 3.08768 0.18713 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 13 3.37444 0.13743 3.42635 2.78609 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 14 3.03758 2.56263 3.08768 0.18713 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 15 3.37444 0.13743 3.42635 2.78609 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 16 3.37444 0.13743 3.42635 2.78609 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 17 3.03758 2.56263 3.08768 0.18713 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 18 3.37444 0.13743 3.42635 2.78609 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 19 2.91173 3.53592 0.12299 3.43528 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 20 2.91173 3.53592 0.12299 3.43528 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 21 2.91173 3.53592 0.12299 3.43528 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 22 0.14880 3.32943 2.76878 3.22633 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 23 2.91173 3.53592 0.12299 3.43528 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 24 3.37444 0.13743 3.42635 2.78609 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 25 0.14880 3.32943 2.76878 3.22633 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 26 2.91173 3.53592 0.12299 3.43528 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 27 2.91173 3.53592 0.12299 3.43528 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 28 3.03758 2.56263 3.08768 0.18713 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 29 3.37444 0.13743 3.42635 2.78609 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 30 3.03758 2.56263 3.08768 0.18713 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 31 2.91173 3.53592 0.12299 3.43528 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 32 3.03758 2.56263 3.08768 0.18713 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 33 3.37444 0.13743 3.42635 2.78609 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 34 3.37444 0.13743 3.42635 2.78609 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 35 2.91173 3.53592 0.12299 3.43528 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 36 0.14880 3.32943 2.76878 3.22633 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 37 2.91173 3.53592 0.12299 3.43528 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 38 3.37444 0.13743 3.42635 2.78609 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 39 2.91173 3.53592 0.12299 3.43528 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 40 3.03758 2.56263 3.08768 0.18713 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 41 3.37444 0.13743 3.42635 2.78609 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 42 3.03758 2.56263 3.08768 0.18713 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 43 2.91173 3.53592 0.12299 3.43528 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 44 3.37444 0.13743 3.42635 2.78609 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 45 3.37444 0.13743 3.42635 2.78609 45 - - 1.38629 1.38629 1.38629 1.38629 0.01917 3.96423 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:38 2012 NSEQ 6 EFFN 3.161133 CKSUM 3736386509 STATS LOCAL MSV -7.9213 0.71932 STATS LOCAL VITERBI -7.8583 0.71932 STATS LOCAL FORWARD -3.8470 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92961 1.26295 1.09548 1.43717 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 0.00000 * 1 3.37178 0.13777 3.42379 2.78413 1 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 2 3.03528 2.56116 3.08546 0.18752 2 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 3 3.37178 0.13777 3.42379 2.78413 3 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 4 3.03528 2.56116 3.08546 0.18752 4 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 5 3.37178 0.13777 3.42379 2.78413 5 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 6 2.91009 3.53355 0.12327 3.43268 6 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 7 2.91009 3.53355 0.12327 3.43268 7 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 8 2.91009 3.53355 0.12327 3.43268 8 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 9 3.37178 0.13777 3.42379 2.78413 9 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 10 3.37178 0.13777 3.42379 2.78413 10 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 11 3.37178 0.13777 3.42379 2.78413 11 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 12 3.03528 2.56116 3.08546 0.18752 12 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 13 2.91009 3.53355 0.12327 3.43268 13 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 14 2.91009 3.53355 0.12327 3.43268 14 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 15 3.03528 2.56116 3.08546 0.18752 15 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 16 3.37178 0.13777 3.42379 2.78413 16 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 17 3.37178 0.13777 3.42379 2.78413 17 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 18 3.37178 0.13777 3.42379 2.78413 18 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 19 2.91009 3.53355 0.12327 3.43268 19 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 20 2.91009 3.53355 0.12327 3.43268 20 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 21 2.91009 3.53355 0.12327 3.43268 21 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 22 0.14912 3.32712 2.76727 3.22381 22 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 23 2.91009 3.53355 0.12327 3.43268 23 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 24 3.37178 0.13777 3.42379 2.78413 24 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 25 0.14912 3.32712 2.76727 3.22381 25 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 26 3.03528 2.56116 3.08546 0.18752 26 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 27 2.91009 3.53355 0.12327 3.43268 27 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 28 3.03528 2.56116 3.08546 0.18752 28 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 29 3.37178 0.13777 3.42379 2.78413 29 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 30 3.03528 2.56116 3.08546 0.18752 30 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 31 2.91009 3.53355 0.12327 3.43268 31 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 32 3.03528 2.56116 3.08546 0.18752 32 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 33 3.37178 0.13777 3.42379 2.78413 33 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 34 3.03528 2.56116 3.08546 0.18752 34 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 35 2.91009 3.53355 0.12327 3.43268 35 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 36 0.14912 3.32712 2.76727 3.22381 36 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 37 2.91009 3.53355 0.12327 3.43268 37 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 38 2.91009 3.53355 0.12327 3.43268 38 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 39 2.91009 3.53355 0.12327 3.43268 39 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 40 3.03528 2.56116 3.08546 0.18752 40 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 41 3.37178 0.13777 3.42379 2.78413 41 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 42 2.91009 3.53355 0.12327 3.43268 42 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 43 0.14912 3.32712 2.76727 3.22381 43 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 44 0.14912 3.32712 2.76727 3.22381 44 - - 1.38629 1.38629 1.38629 1.38629 0.03802 3.98176 3.98176 1.46634 0.26236 1.09861 0.40547 45 3.03528 2.56116 3.08546 0.18752 45 - - 1.38629 1.38629 1.38629 1.38629 0.01919 3.96293 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:51:08 2012 NSEQ 15 EFFN 3.211670 CKSUM 3750062705 STATS LOCAL MSV -8.2153 0.71932 STATS LOCAL VITERBI -7.8337 0.71932 STATS LOCAL FORWARD -4.0703 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05372 1.19574 1.09436 1.45026 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 0.00000 * 1 3.39134 0.13530 3.44255 2.79849 1 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 2 2.92210 3.55089 0.12127 3.45176 2 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 3 3.39134 0.13530 3.44255 2.79849 3 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 4 3.39134 0.13530 3.44255 2.79849 4 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 5 3.39134 0.13530 3.44255 2.79849 5 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 6 3.05221 2.57196 3.10175 0.18466 6 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 7 3.39134 0.13530 3.44255 2.79849 7 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 8 2.92210 3.55089 0.12127 3.45176 8 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 9 2.92210 3.55089 0.12127 3.45176 9 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 10 3.05221 2.57196 3.10175 0.18466 10 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 11 3.05221 2.57196 3.10175 0.18466 11 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 12 2.64062 1.70487 2.70448 0.38569 12 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 13 2.92210 3.55089 0.12127 3.45176 13 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 14 0.14677 3.34406 2.77834 3.24231 14 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 15 0.14677 3.34406 2.77834 3.24231 15 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 16 2.92210 3.55089 0.12127 3.45176 16 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 17 3.39134 0.13530 3.44255 2.79849 17 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 18 3.39134 0.13530 3.44255 2.79849 18 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 19 2.92210 3.55089 0.12127 3.45176 19 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 20 2.92210 3.55089 0.12127 3.45176 20 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 21 2.92210 3.55089 0.12127 3.45176 21 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 22 2.92210 3.55089 0.12127 3.45176 22 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 23 2.92210 3.55089 0.12127 3.45176 23 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 24 3.39134 0.13530 3.44255 2.79849 24 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 25 0.14677 3.34406 2.77834 3.24231 25 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 26 3.39134 0.13530 3.44255 2.79849 26 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 27 2.92210 3.55089 0.12127 3.45176 27 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 28 3.05221 2.57196 3.10175 0.18466 28 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 29 3.39134 0.13530 3.44255 2.79849 29 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 30 3.05221 2.57196 3.10175 0.18466 30 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 31 2.92210 3.55089 0.12127 3.45176 31 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 32 3.05221 2.57196 3.10175 0.18466 32 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 33 3.39134 0.13530 3.44255 2.79849 33 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 34 3.05221 2.57196 3.10175 0.18466 34 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 35 2.92210 3.55089 0.12127 3.45176 35 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 36 0.14677 3.34406 2.77834 3.24231 36 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 37 2.92210 3.55089 0.12127 3.45176 37 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 38 3.39134 0.13530 3.44255 2.79849 38 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 39 2.92210 3.55089 0.12127 3.45176 39 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 40 3.05221 2.57196 3.10175 0.18466 40 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 41 3.39134 0.13530 3.44255 2.79849 41 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 42 3.39134 0.13530 3.44255 2.79849 42 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 43 2.92210 3.55089 0.12127 3.45176 43 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 44 3.05221 2.57196 3.10175 0.18466 44 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99114 3.99114 1.46634 0.26236 1.09861 0.40547 45 3.05221 2.57196 3.10175 0.18466 45 - - 1.38629 1.38629 1.38629 1.38629 0.01901 3.97249 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:44 2012 NSEQ 2 EFFN 2.000000 CKSUM 3351881953 STATS LOCAL MSV -7.4836 0.72751 STATS LOCAL VITERBI -8.3118 0.72751 STATS LOCAL FORWARD -3.4363 0.72751 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92284 1.23828 1.12440 1.43096 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:45:56 2012 NSEQ 68 EFFN 3.523682 CKSUM 178105420 STATS LOCAL MSV -7.2532 0.71932 STATS LOCAL VITERBI -7.8642 0.71932 STATS LOCAL FORWARD -3.8274 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.33793 1.03819 1.08795 1.54895 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 0.00000 * 1 3.50468 0.12199 3.55105 2.88082 1 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 2 2.99046 3.65053 0.11052 3.56181 2 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 3 2.99046 3.65053 0.11052 3.56181 3 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 4 3.50468 0.12199 3.55105 2.88082 4 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 5 3.50468 0.12199 3.55105 2.88082 5 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 6 3.50468 0.12199 3.55105 2.88082 6 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 7 3.50468 0.12199 3.55105 2.88082 7 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 8 2.99046 3.65053 0.11052 3.56181 8 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 9 2.99046 3.65053 0.11052 3.56181 9 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 10 2.99046 3.65053 0.11052 3.56181 10 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 11 3.15189 2.63533 3.19760 0.16881 11 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 12 2.44366 0.84925 2.51567 0.90483 12 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 13 2.09412 0.42212 2.19206 2.21199 13 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 14 3.50468 0.12199 3.55105 2.88082 14 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 15 3.15189 2.63533 3.19760 0.16881 15 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 16 3.50468 0.12199 3.55105 2.88082 16 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 17 3.50468 0.12199 3.55105 2.88082 17 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 18 3.50468 0.12199 3.55105 2.88082 18 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 19 2.99046 3.65053 0.11052 3.56181 19 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 20 2.99046 3.65053 0.11052 3.56181 20 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 21 2.99046 3.65053 0.11052 3.56181 21 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 22 2.99046 3.65053 0.11052 3.56181 22 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 23 3.50468 0.12199 3.55105 2.88082 23 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 24 3.15189 2.63533 3.19760 0.16881 24 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 25 0.13394 3.44251 2.84220 3.35013 25 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 26 3.50468 0.12199 3.55105 2.88082 26 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 27 2.99046 3.65053 0.11052 3.56181 27 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 28 2.92172 0.23620 2.53930 2.55598 28 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 29 3.50468 0.12199 3.55105 2.88082 29 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 30 3.15189 2.63533 3.19760 0.16881 30 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 31 2.99046 3.65053 0.11052 3.56181 31 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 32 3.15189 2.63533 3.19760 0.16881 32 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 33 3.34624 0.15613 3.39785 2.57846 33 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 34 3.15189 2.63533 3.19760 0.16881 34 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 35 2.20651 3.22353 0.21643 3.10742 35 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 36 0.13394 3.44251 2.84220 3.35013 36 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 37 2.99046 3.65053 0.11052 3.56181 37 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 38 2.99046 3.65053 0.11052 3.56181 38 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 39 2.99046 3.65053 0.11052 3.56181 39 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 40 3.15189 2.63533 3.19760 0.16881 40 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 41 3.50468 0.12199 3.55105 2.88082 41 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 42 2.99046 3.65053 0.11052 3.56181 42 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 43 3.50468 0.12199 3.55105 2.88082 43 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 44 3.15189 2.63533 3.19760 0.16881 44 - - 1.38629 1.38629 1.38629 1.38629 0.03557 4.04720 4.04720 1.46634 0.26236 1.09861 0.40547 45 1.98377 2.36627 2.60703 0.36404 45 - - 1.38629 1.38629 1.38629 1.38629 0.01794 4.02957 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:22 2012 NSEQ 3 EFFN 3.000000 CKSUM 2629441741 STATS LOCAL MSV -7.8868 0.72036 STATS LOCAL VITERBI -7.8389 0.72036 STATS LOCAL FORWARD -3.5128 0.72036 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.79123 1.15229 1.19955 1.53246 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 1.31633 2.11286 2.18717 0.69564 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:29 2012 NSEQ 8 EFFN 3.199219 CKSUM 1510523105 STATS LOCAL MSV -8.0942 0.71931 STATS LOCAL VITERBI -7.7144 0.71931 STATS LOCAL FORWARD -3.8492 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92718 1.19573 1.04178 1.61378 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 * 1 3.38655 0.13590 3.43796 2.79498 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 2 2.91917 3.54665 0.12176 3.44709 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 3 2.91917 3.54665 0.12176 3.44709 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 4 3.38655 0.13590 3.43796 2.79498 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 5 3.38655 0.13590 3.43796 2.79498 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 6 3.04806 2.56931 3.09775 0.18535 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 7 3.38655 0.13590 3.43796 2.79498 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 8 2.91917 3.54665 0.12176 3.44709 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 9 2.91917 3.54665 0.12176 3.44709 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 10 2.91917 3.54665 0.12176 3.44709 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 11 3.04806 2.56931 3.09775 0.18535 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 12 0.14734 3.33991 2.77563 3.23778 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 13 0.14734 3.33991 2.77563 3.23778 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 14 3.38655 0.13590 3.43796 2.79498 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 15 3.04806 2.56931 3.09775 0.18535 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 16 3.38655 0.13590 3.43796 2.79498 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 17 3.38655 0.13590 3.43796 2.79498 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 18 3.38655 0.13590 3.43796 2.79498 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 19 2.91917 3.54665 0.12176 3.44709 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 20 0.14734 3.33991 2.77563 3.23778 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 21 2.91917 3.54665 0.12176 3.44709 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 22 2.91917 3.54665 0.12176 3.44709 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 23 3.38655 0.13590 3.43796 2.79498 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 24 3.38655 0.13590 3.43796 2.79498 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 25 0.14734 3.33991 2.77563 3.23778 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 26 3.38655 0.13590 3.43796 2.79498 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 27 2.91917 3.54665 0.12176 3.44709 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 28 3.04806 2.56931 3.09775 0.18535 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 29 3.38655 0.13590 3.43796 2.79498 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 30 3.04806 2.56931 3.09775 0.18535 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 31 2.91917 3.54665 0.12176 3.44709 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 32 3.04806 2.56931 3.09775 0.18535 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 33 3.38655 0.13590 3.43796 2.79498 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 34 3.04806 2.56931 3.09775 0.18535 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 35 2.91917 3.54665 0.12176 3.44709 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 36 0.14734 3.33991 2.77563 3.23778 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 37 2.91917 3.54665 0.12176 3.44709 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 38 2.91917 3.54665 0.12176 3.44709 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 39 2.91917 3.54665 0.12176 3.44709 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 40 3.04806 2.56931 3.09775 0.18535 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 41 3.38655 0.13590 3.43796 2.79498 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 42 2.91917 3.54665 0.12176 3.44709 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 43 2.91917 3.54665 0.12176 3.44709 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 44 2.43829 1.24940 2.50849 0.60766 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 45 2.91917 3.54665 0.12176 3.44709 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97014 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:34 2012 NSEQ 8 EFFN 3.300781 CKSUM 1006154723 STATS LOCAL MSV -8.1502 0.71931 STATS LOCAL VITERBI -7.8569 0.71931 STATS LOCAL FORWARD -3.8991 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.19096 1.09950 0.99259 1.68991 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 0.00000 * 1 3.42500 0.13118 3.47480 2.82309 1 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 2 2.94261 3.58061 0.11794 3.48454 2 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 3 2.94261 3.58061 0.11794 3.48454 3 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 4 3.42500 0.13118 3.47480 2.82309 4 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 5 2.58757 1.55569 2.65338 0.44108 5 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 6 3.42500 0.13118 3.47480 2.82309 6 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 7 3.42500 0.13118 3.47480 2.82309 7 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 8 2.94261 3.58061 0.11794 3.48454 8 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 9 2.94261 3.58061 0.11794 3.48454 9 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 10 2.94261 3.58061 0.11794 3.48454 10 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 11 3.08151 2.59063 3.12994 0.17982 11 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 12 3.42500 0.13118 3.47480 2.82309 12 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 13 0.14283 3.37323 2.79735 3.27422 13 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 14 2.63568 0.44340 2.70558 1.51574 14 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 15 3.08151 2.59063 3.12994 0.17982 15 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 16 3.42500 0.13118 3.47480 2.82309 16 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 17 3.42500 0.13118 3.47480 2.82309 17 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 18 3.42500 0.13118 3.47480 2.82309 18 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 19 2.94261 3.58061 0.11794 3.48454 19 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 20 2.94261 3.58061 0.11794 3.48454 20 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 21 2.94261 3.58061 0.11794 3.48454 21 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 22 2.94261 3.58061 0.11794 3.48454 22 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 23 3.42500 0.13118 3.47480 2.82309 23 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 24 3.42500 0.13118 3.47480 2.82309 24 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 25 0.14283 3.37323 2.79735 3.27422 25 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 26 3.42500 0.13118 3.47480 2.82309 26 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 27 2.94261 3.58061 0.11794 3.48454 27 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 28 2.58757 1.55569 2.65338 0.44108 28 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 29 3.42500 0.13118 3.47480 2.82309 29 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 30 3.08151 2.59063 3.12994 0.17982 30 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 31 2.94261 3.58061 0.11794 3.48454 31 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 32 3.08151 2.59063 3.12994 0.17982 32 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 33 3.42500 0.13118 3.47480 2.82309 33 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 34 3.08151 2.59063 3.12994 0.17982 34 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 35 2.94261 3.58061 0.11794 3.48454 35 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 36 0.14283 3.37323 2.79735 3.27422 36 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 37 2.94261 3.58061 0.11794 3.48454 37 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 38 2.94261 3.58061 0.11794 3.48454 38 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 39 2.94261 3.58061 0.11794 3.48454 39 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 40 3.08151 2.59063 3.12994 0.17982 40 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 41 3.42500 0.13118 3.47480 2.82309 41 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 42 2.94261 3.58061 0.11794 3.48454 42 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 43 2.94261 3.58061 0.11794 3.48454 43 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 44 3.42500 0.13118 3.47480 2.82309 44 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 45 2.94261 3.58061 0.11794 3.48454 45 - - 1.38629 1.38629 1.38629 1.38629 0.01869 3.98913 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoneg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:39 2012 NSEQ 3 EFFN 3.000000 CKSUM 2752023140 STATS LOCAL MSV -8.0112 0.71987 STATS LOCAL VITERBI -7.8601 0.71987 STATS LOCAL FORWARD -4.0646 0.71987 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04242 1.15565 1.09893 1.50414 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoneh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:46 2012 NSEQ 11 EFFN 3.370361 CKSUM 3371393112 STATS LOCAL MSV -7.2193 0.71933 STATS LOCAL VITERBI -7.8016 0.71933 STATS LOCAL FORWARD -4.0798 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.99517 1.04017 1.08680 1.75262 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 0.00000 * 1 3.45055 0.12815 3.49927 2.84168 1 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 2 2.95806 3.60310 0.11549 3.50937 2 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 3 2.95806 3.60310 0.11549 3.50937 3 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 4 3.45055 0.12815 3.49927 2.84168 4 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 5 2.42298 1.04864 2.49442 0.73734 5 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 6 3.45055 0.12815 3.49927 2.84168 6 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 7 2.80636 0.33742 2.87302 1.77528 7 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 8 2.95806 3.60310 0.11549 3.50937 8 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 9 2.95806 3.60310 0.11549 3.50937 9 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 10 2.95806 3.60310 0.11549 3.50937 10 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 11 3.10392 2.60488 3.15149 0.17623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 12 3.45055 0.12815 3.49927 2.84168 12 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 13 0.13991 3.39541 2.81175 3.29851 13 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 14 3.45055 0.12815 3.49927 2.84168 14 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 15 3.10392 2.60488 3.15149 0.17623 15 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 16 3.45055 0.12815 3.49927 2.84168 16 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 17 3.45055 0.12815 3.49927 2.84168 17 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 18 3.45055 0.12815 3.49927 2.84168 18 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 19 2.95806 3.60310 0.11549 3.50937 19 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 20 2.95806 3.60310 0.11549 3.50937 20 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 21 0.13991 3.39541 2.81175 3.29851 21 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 22 2.95806 3.60310 0.11549 3.50937 22 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 23 3.45055 0.12815 3.49927 2.84168 23 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 24 3.45055 0.12815 3.49927 2.84168 24 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 25 0.13991 3.39541 2.81175 3.29851 25 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 26 3.45055 0.12815 3.49927 2.84168 26 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 27 2.95806 3.60310 0.11549 3.50937 27 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 28 3.45055 0.12815 3.49927 2.84168 28 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 29 3.45055 0.12815 3.49927 2.84168 29 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 30 3.10392 2.60488 3.15149 0.17623 30 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 31 2.95806 3.60310 0.11549 3.50937 31 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 32 3.10392 2.60488 3.15149 0.17623 32 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 33 3.45055 0.12815 3.49927 2.84168 33 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 34 3.10392 2.60488 3.15149 0.17623 34 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 35 2.95806 3.60310 0.11549 3.50937 35 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 36 0.13991 3.39541 2.81175 3.29851 36 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 37 2.95806 3.60310 0.11549 3.50937 37 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 38 2.95806 3.60310 0.11549 3.50937 38 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 39 2.95806 3.60310 0.11549 3.50937 39 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 40 3.10392 2.60488 3.15149 0.17623 40 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 41 3.45055 0.12815 3.49927 2.84168 41 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 42 2.95806 3.60310 0.11549 3.50937 42 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 43 2.95806 3.60310 0.11549 3.50937 43 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 44 3.45055 0.12815 3.49927 2.84168 44 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02004 4.02004 1.46634 0.26236 1.09861 0.40547 45 0.72443 2.22589 2.18730 1.22007 45 - - 1.38629 1.38629 1.38629 1.38629 0.01845 4.00193 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:51 2012 NSEQ 4 EFFN 3.253906 CKSUM 2638254345 STATS LOCAL MSV -7.9634 0.71932 STATS LOCAL VITERBI -7.8088 0.71932 STATS LOCAL FORWARD -4.1822 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.00216 1.20315 1.07261 1.50239 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 0.00000 * 1 3.40742 0.13331 3.45796 2.81026 1 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 2 2.93193 3.56511 0.11967 3.46744 2 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 3 2.93193 3.56511 0.11967 3.46744 3 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 4 3.40742 0.13331 3.45796 2.81026 4 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 5 3.06618 2.58087 3.11519 0.18233 5 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 6 3.06618 2.58087 3.11519 0.18233 6 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 7 3.06618 2.58087 3.11519 0.18233 7 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 8 2.93193 3.56511 0.11967 3.46744 8 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 9 2.93193 3.56511 0.11967 3.46744 9 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 10 2.93193 3.56511 0.11967 3.46744 10 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 11 3.06618 2.58087 3.11519 0.18233 11 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 12 3.40742 0.13331 3.45796 2.81026 12 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 13 0.14487 3.35799 2.78743 3.25755 13 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 14 3.40742 0.13331 3.45796 2.81026 14 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 15 3.06618 2.58087 3.11519 0.18233 15 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 16 3.40742 0.13331 3.45796 2.81026 16 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 17 3.40742 0.13331 3.45796 2.81026 17 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 18 3.40742 0.13331 3.45796 2.81026 18 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 19 2.93193 3.56511 0.11967 3.46744 19 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 20 0.86439 2.50382 0.91051 2.35812 20 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 21 0.14487 3.35799 2.78743 3.25755 21 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 22 2.93193 3.56511 0.11967 3.46744 22 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 23 3.40742 0.13331 3.45796 2.81026 23 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 24 3.40742 0.13331 3.45796 2.81026 24 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 25 0.14487 3.35799 2.78743 3.25755 25 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 26 3.40742 0.13331 3.45796 2.81026 26 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 27 2.93193 3.56511 0.11967 3.46744 27 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 28 3.40742 0.13331 3.45796 2.81026 28 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 29 3.40742 0.13331 3.45796 2.81026 29 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 30 3.06618 2.58087 3.11519 0.18233 30 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 31 2.93193 3.56511 0.11967 3.46744 31 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 32 3.06618 2.58087 3.11519 0.18233 32 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 33 3.40742 0.13331 3.45796 2.81026 33 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 34 3.06618 2.58087 3.11519 0.18233 34 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 35 2.93193 3.56511 0.11967 3.46744 35 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 36 0.14487 3.35799 2.78743 3.25755 36 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 37 2.93193 3.56511 0.11967 3.46744 37 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 38 2.93193 3.56511 0.11967 3.46744 38 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 39 2.93193 3.56511 0.11967 3.46744 39 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 40 3.06618 2.58087 3.11519 0.18233 40 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 41 3.40742 0.13331 3.45796 2.81026 41 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 42 2.93193 3.56511 0.11967 3.46744 42 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 43 2.93193 3.56511 0.11967 3.46744 43 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 44 3.06618 2.58087 3.11519 0.18233 44 - - 1.38629 1.38629 1.38629 1.38629 0.03736 3.99892 3.99892 1.46634 0.26236 1.09861 0.40547 45 2.93193 3.56511 0.11967 3.46744 45 - - 1.38629 1.38629 1.38629 1.38629 0.01885 3.98041 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:46:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 4204561327 STATS LOCAL MSV -7.3459 0.72810 STATS LOCAL VITERBI -8.2466 0.72810 STATS LOCAL FORWARD -3.4606 0.72810 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82402 1.11829 1.12097 1.68296 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.15554 1.00938 2.23102 0.88601 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.15554 1.00938 2.23102 0.88601 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:03 2012 NSEQ 2 EFFN 2.000000 CKSUM 1792586209 STATS LOCAL MSV -7.4246 0.72709 STATS LOCAL VITERBI -8.3745 0.72709 STATS LOCAL FORWARD -3.2313 0.72709 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92710 1.15123 1.08134 1.61425 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:08 2012 NSEQ 47 EFFN 3.278870 CKSUM 1171561476 STATS LOCAL MSV -7.9855 0.71932 STATS LOCAL VITERBI -7.7310 0.71932 STATS LOCAL FORWARD -3.7739 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.09004 1.00197 1.05220 1.83263 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 0.00000 * 1 3.41682 0.13217 3.46697 2.81712 1 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 2 2.93765 3.57340 0.11874 3.47658 2 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 3 2.93765 3.57340 0.11874 3.47658 3 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 4 3.41682 0.13217 3.46697 2.81712 4 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 5 3.41682 0.13217 3.46697 2.81712 5 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 6 3.07437 2.58608 3.12307 0.18099 6 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 7 3.41682 0.13217 3.46697 2.81712 7 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 8 2.93765 3.57340 0.11874 3.47658 8 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 9 2.93765 3.57340 0.11874 3.47658 9 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 10 2.93765 3.57340 0.11874 3.47658 10 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 11 3.07437 2.58608 3.12307 0.18099 11 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 12 3.41682 0.13217 3.46697 2.81712 12 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 13 3.41682 0.13217 3.46697 2.81712 13 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 14 1.00314 2.52316 0.77589 2.37760 14 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 15 3.07437 2.58608 3.12307 0.18099 15 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 16 3.41682 0.13217 3.46697 2.81712 16 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 17 3.41682 0.13217 3.46697 2.81712 17 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 18 3.41682 0.13217 3.46697 2.81712 18 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 19 2.93765 3.57340 0.11874 3.47658 19 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 20 0.14377 3.36613 2.79274 3.26646 20 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 21 2.93765 3.57340 0.11874 3.47658 21 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 22 2.93765 3.57340 0.11874 3.47658 22 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 23 3.41682 0.13217 3.46697 2.81712 23 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 24 3.41682 0.13217 3.46697 2.81712 24 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 25 0.14377 3.36613 2.79274 3.26646 25 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 26 3.41682 0.13217 3.46697 2.81712 26 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 27 2.93765 3.57340 0.11874 3.47658 27 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 28 3.41682 0.13217 3.46697 2.81712 28 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 29 3.41682 0.13217 3.46697 2.81712 29 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 30 3.41682 0.13217 3.46697 2.81712 30 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 31 2.93765 3.57340 0.11874 3.47658 31 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 32 3.07437 2.58608 3.12307 0.18099 32 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 33 3.41682 0.13217 3.46697 2.81712 33 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 34 3.07437 2.58608 3.12307 0.18099 34 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 35 2.93765 3.57340 0.11874 3.47658 35 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 36 0.14377 3.36613 2.79274 3.26646 36 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 37 2.93765 3.57340 0.11874 3.47658 37 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 38 2.93765 3.57340 0.11874 3.47658 38 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 39 2.93765 3.57340 0.11874 3.47658 39 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 40 3.07437 2.58608 3.12307 0.18099 40 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 41 3.41682 0.13217 3.46697 2.81712 41 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 42 2.93765 3.57340 0.11874 3.47658 42 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 43 2.93765 3.57340 0.11874 3.47658 43 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 44 3.41682 0.13217 3.46697 2.81712 44 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00348 4.00348 1.46634 0.26236 1.09861 0.40547 45 0.83989 2.50807 0.93487 2.36258 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98506 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonem_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:14 2012 NSEQ 15 EFFN 3.101807 CKSUM 122630504 STATS LOCAL MSV -8.1264 0.71934 STATS LOCAL VITERBI -7.7491 0.71934 STATS LOCAL FORWARD -3.9428 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04999 1.15617 1.04738 1.58125 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 0.00000 * 1 3.34837 0.14079 3.40133 2.76688 1 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 2 2.89562 3.51276 0.12571 3.40979 2 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 3 2.89562 3.51276 0.12571 3.40979 3 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 4 3.34837 0.14079 3.40133 2.76688 4 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 5 3.34837 0.14079 3.40133 2.76688 5 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 6 3.01512 2.54827 3.06606 0.19099 6 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 7 3.34837 0.14079 3.40133 2.76688 7 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 8 2.89562 3.51276 0.12571 3.40979 8 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 9 2.89562 3.51276 0.12571 3.40979 9 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 10 2.89562 3.51276 0.12571 3.40979 10 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 11 3.01512 2.54827 3.06606 0.19099 11 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 12 3.34837 0.14079 3.40133 2.76688 12 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 13 0.15198 3.30687 2.75398 3.20169 13 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 14 0.15198 3.30687 2.75398 3.20169 14 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 15 3.01512 2.54827 3.06606 0.19099 15 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 16 3.34837 0.14079 3.40133 2.76688 16 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 17 3.34837 0.14079 3.40133 2.76688 17 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 18 3.34837 0.14079 3.40133 2.76688 18 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 19 2.89562 3.51276 0.12571 3.40979 19 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 20 2.89562 3.51276 0.12571 3.40979 20 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 21 2.89562 3.51276 0.12571 3.40979 21 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 22 2.89562 3.51276 0.12571 3.40979 22 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 23 3.34837 0.14079 3.40133 2.76688 23 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 24 3.34837 0.14079 3.40133 2.76688 24 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 25 0.15198 3.30687 2.75398 3.20169 25 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 26 3.34837 0.14079 3.40133 2.76688 26 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 27 2.89562 3.51276 0.12571 3.40979 27 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 28 3.01512 2.54827 3.06606 0.19099 28 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 29 3.34837 0.14079 3.40133 2.76688 29 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 30 3.34837 0.14079 3.40133 2.76688 30 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 31 2.89562 3.51276 0.12571 3.40979 31 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 32 3.01512 2.54827 3.06606 0.19099 32 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 33 3.34837 0.14079 3.40133 2.76688 33 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 34 3.01512 2.54827 3.06606 0.19099 34 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 35 2.89562 3.51276 0.12571 3.40979 35 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 36 0.15198 3.30687 2.75398 3.20169 36 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 37 2.89562 3.51276 0.12571 3.40979 37 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 38 2.89562 3.51276 0.12571 3.40979 38 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 39 2.89562 3.51276 0.12571 3.40979 39 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 40 3.01512 2.54827 3.06606 0.19099 40 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 41 3.34837 0.14079 3.40133 2.76688 41 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 42 2.89562 3.51276 0.12571 3.40979 42 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 43 2.89562 3.51276 0.12571 3.40979 43 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 44 3.01512 2.54827 3.06606 0.19099 44 - - 1.38629 1.38629 1.38629 1.38629 0.03845 3.97063 3.97063 1.46634 0.26236 1.09861 0.40547 45 3.01512 2.54827 3.06606 0.19099 45 - - 1.38629 1.38629 1.38629 1.38629 0.01941 3.95159 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:19 2012 NSEQ 14 EFFN 3.496582 CKSUM 454827207 STATS LOCAL MSV -7.1258 0.71933 STATS LOCAL VITERBI -7.6320 0.71933 STATS LOCAL FORWARD -4.0437 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.07348 1.02582 1.07126 1.75347 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 0.00000 * 1 3.49533 0.12303 3.54211 2.87408 1 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 2 2.98489 3.64235 0.11136 3.55276 2 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 3 2.98489 3.64235 0.11136 3.55276 3 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 4 3.49533 0.12303 3.54211 2.87408 4 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 5 2.78530 1.85386 2.84503 0.32362 5 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 6 3.49533 0.12303 3.54211 2.87408 6 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 7 2.56878 1.42220 2.63576 0.49344 7 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 8 2.98489 3.64235 0.11136 3.55276 8 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 9 2.98489 3.64235 0.11136 3.55276 9 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 10 3.49533 0.12303 3.54211 2.87408 10 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 11 3.14355 2.63004 3.18959 0.17007 11 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 12 3.49533 0.12303 3.54211 2.87408 12 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 13 0.13496 3.43436 2.83695 3.34119 13 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 14 3.49533 0.12303 3.54211 2.87408 14 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 15 3.14355 2.63004 3.18959 0.17007 15 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 16 2.98489 3.64235 0.11136 3.55276 16 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 17 3.49533 0.12303 3.54211 2.87408 17 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 18 3.49533 0.12303 3.54211 2.87408 18 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 19 0.46429 2.70804 1.47690 2.57173 19 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 20 2.98489 3.64235 0.11136 3.55276 20 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 21 0.27794 3.00111 1.98907 2.88058 21 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 22 2.98489 3.64235 0.11136 3.55276 22 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 23 3.49533 0.12303 3.54211 2.87408 23 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 24 3.49533 0.12303 3.54211 2.87408 24 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 25 0.87142 2.18300 2.17975 1.03319 25 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 26 3.49533 0.12303 3.54211 2.87408 26 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 27 2.98489 3.64235 0.11136 3.55276 27 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 28 3.49533 0.12303 3.54211 2.87408 28 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 29 3.49533 0.12303 3.54211 2.87408 29 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 30 3.14355 2.63004 3.18959 0.17007 30 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 31 2.98489 3.64235 0.11136 3.55276 31 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 32 3.14355 2.63004 3.18959 0.17007 32 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 33 3.49533 0.12303 3.54211 2.87408 33 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 34 3.49533 0.12303 3.54211 2.87408 34 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 35 2.98489 3.64235 0.11136 3.55276 35 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 36 0.13496 3.43436 2.83695 3.34119 36 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 37 2.98489 3.64235 0.11136 3.55276 37 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 38 2.98489 3.64235 0.11136 3.55276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 39 2.98489 3.64235 0.11136 3.55276 39 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 40 3.14355 2.63004 3.18959 0.17007 40 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 41 3.49533 0.12303 3.54211 2.87408 41 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 42 2.98489 3.64235 0.11136 3.55276 42 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 43 2.98489 3.64235 0.11136 3.55276 43 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 44 3.49533 0.12303 3.54211 2.87408 44 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 45 2.98489 3.64235 0.11136 3.55276 45 - - 1.38629 1.38629 1.38629 1.38629 0.01803 4.02474 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoneo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:23 2012 NSEQ 24 EFFN 3.477539 CKSUM 2321990089 STATS LOCAL MSV -7.2176 0.71931 STATS LOCAL VITERBI -7.8215 0.71931 STATS LOCAL FORWARD -3.6009 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.02877 1.12529 1.08171 1.58510 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 0.00000 * 1 2.98094 3.63655 0.11196 3.54635 1 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 2 3.48870 0.12377 3.53577 2.86929 2 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 3 2.98094 3.63655 0.11196 3.54635 3 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 4 2.98094 3.63655 0.11196 3.54635 4 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 5 3.48870 0.12377 3.53577 2.86929 5 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 6 3.48870 0.12377 3.53577 2.86929 6 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 7 3.13765 2.62630 3.18392 0.17097 7 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 8 3.48870 0.12377 3.53577 2.86929 8 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 9 2.98094 3.63655 0.11196 3.54635 9 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 10 2.98094 3.63655 0.11196 3.54635 10 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 11 2.98094 3.63655 0.11196 3.54635 11 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 12 2.48121 1.20688 2.55094 0.61763 12 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 13 0.13568 3.42858 2.83322 3.33486 13 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 14 1.44121 1.61091 2.13965 0.80754 14 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 15 3.13765 2.62630 3.18392 0.17097 15 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 16 3.48870 0.12377 3.53577 2.86929 16 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 17 3.48870 0.12377 3.53577 2.86929 17 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 18 3.48870 0.12377 3.53577 2.86929 18 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 19 2.98094 3.63655 0.11196 3.54635 19 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 20 0.13568 3.42858 2.83322 3.33486 20 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 21 2.98094 3.63655 0.11196 3.54635 21 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 22 2.98094 3.63655 0.11196 3.54635 22 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 23 3.48870 0.12377 3.53577 2.86929 23 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 24 3.48870 0.12377 3.53577 2.86929 24 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 25 0.13568 3.42858 2.83322 3.33486 25 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 26 2.42167 0.25236 2.92944 2.51535 26 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 27 2.98094 3.63655 0.11196 3.54635 27 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 28 3.48870 0.12377 3.53577 2.86929 28 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 29 3.48870 0.12377 3.53577 2.86929 29 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 30 2.75701 1.80810 2.81769 0.33854 30 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 31 2.98094 3.63655 0.11196 3.54635 31 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 32 3.13765 2.62630 3.18392 0.17097 32 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 33 3.48870 0.12377 3.53577 2.86929 33 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 34 3.13765 2.62630 3.18392 0.17097 34 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 35 3.48870 0.12377 3.53577 2.86929 35 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 36 0.13568 3.42858 2.83322 3.33486 36 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 37 2.98094 3.63655 0.11196 3.54635 37 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 38 2.98094 3.63655 0.11196 3.54635 38 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 39 2.98094 3.63655 0.11196 3.54635 39 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 40 3.13765 2.62630 3.18392 0.17097 40 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 41 3.48870 0.12377 3.53577 2.86929 41 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 42 2.98094 3.63655 0.11196 3.54635 42 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 43 2.98094 3.63655 0.11196 3.54635 43 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 44 3.13765 2.62630 3.18392 0.17097 44 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547 45 3.13765 2.62630 3.18392 0.17097 45 - - 1.38629 1.38629 1.38629 1.38629 0.01809 4.02133 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyonep_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:28 2012 NSEQ 2 EFFN 2.000000 CKSUM 488441447 STATS LOCAL MSV -7.4471 0.72733 STATS LOCAL VITERBI -8.3499 0.72733 STATS LOCAL FORWARD -3.0393 0.72733 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.75073 1.10536 1.22053 1.60851 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoneq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:35 2012 NSEQ 13 EFFN 3.380127 CKSUM 962922846 STATS LOCAL MSV -7.3474 0.71932 STATS LOCAL VITERBI -7.7040 0.71932 STATS LOCAL FORWARD -3.8646 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04819 1.08537 1.24545 1.40469 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 0.00000 * 1 2.96019 3.60621 0.11516 3.51280 1 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 2 3.45409 0.12773 3.50265 2.84425 2 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 3 2.96019 3.60621 0.11516 3.51280 3 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 4 2.96019 3.60621 0.11516 3.51280 4 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 5 3.45409 0.12773 3.50265 2.84425 5 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 6 0.13951 3.39848 2.81374 3.30187 6 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 7 3.10704 2.60685 3.15448 0.17574 7 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 8 3.45409 0.12773 3.50265 2.84425 8 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 9 2.96019 3.60621 0.11516 3.51280 9 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 10 2.96019 3.60621 0.11516 3.51280 10 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 11 3.45409 0.12773 3.50265 2.84425 11 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 12 3.10704 2.60685 3.15448 0.17574 12 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 13 3.10704 2.60685 3.15448 0.17574 13 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 14 3.45409 0.12773 3.50265 2.84425 14 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 15 3.45409 0.12773 3.50265 2.84425 15 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 16 0.13951 3.39848 2.81374 3.30187 16 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 17 3.45409 0.12773 3.50265 2.84425 17 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 18 3.45409 0.12773 3.50265 2.84425 18 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 19 2.96019 3.60621 0.11516 3.51280 19 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 20 1.84363 2.30298 2.50331 0.41554 20 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 21 3.10704 2.60685 3.15448 0.17574 21 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 22 2.96019 3.60621 0.11516 3.51280 22 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 23 3.45409 0.12773 3.50265 2.84425 23 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 24 3.45409 0.12773 3.50265 2.84425 24 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 25 0.13951 3.39848 2.81374 3.30187 25 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 26 3.45409 0.12773 3.50265 2.84425 26 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 27 2.96019 3.60621 0.11516 3.51280 27 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 28 3.45409 0.12773 3.50265 2.84425 28 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 29 3.45409 0.12773 3.50265 2.84425 29 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 30 3.10704 2.60685 3.15448 0.17574 30 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 31 2.96019 3.60621 0.11516 3.51280 31 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 32 3.10704 2.60685 3.15448 0.17574 32 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 33 3.45409 0.12773 3.50265 2.84425 33 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 34 3.10704 2.60685 3.15448 0.17574 34 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 35 3.45409 0.12773 3.50265 2.84425 35 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 36 0.13951 3.39848 2.81374 3.30187 36 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 37 2.96019 3.60621 0.11516 3.51280 37 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 38 2.96019 3.60621 0.11516 3.51280 38 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 39 2.96019 3.60621 0.11516 3.51280 39 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 40 3.10704 2.60685 3.15448 0.17574 40 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 41 3.45409 0.12773 3.50265 2.84425 41 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 42 2.96019 3.60621 0.11516 3.51280 42 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 43 2.20232 2.18081 1.41085 0.63005 43 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 44 3.10704 2.60685 3.15448 0.17574 44 - - 1.38629 1.38629 1.38629 1.38629 0.03650 4.02180 4.02180 1.46634 0.26236 1.09861 0.40547 45 3.10704 2.60685 3.15448 0.17574 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00371 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortyoner_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:41 2012 NSEQ 6 EFFN 3.284180 CKSUM 1160924706 STATS LOCAL MSV -8.1910 0.71932 STATS LOCAL VITERBI -7.7546 0.71932 STATS LOCAL FORWARD -4.1572 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92186 1.19878 1.11086 1.50135 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 0.00000 * 1 2.93885 3.57515 0.11855 3.47852 1 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 2 2.93885 3.57515 0.11855 3.47852 2 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 3 3.41881 0.13193 3.46887 2.81857 3 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 4 3.41881 0.13193 3.46887 2.81857 4 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 5 3.07610 2.58718 3.12474 0.18071 5 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 6 3.41881 0.13193 3.46887 2.81857 6 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 7 3.07610 2.58718 3.12474 0.18071 7 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 8 2.93885 3.57515 0.11855 3.47852 8 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 9 2.93885 3.57515 0.11855 3.47852 9 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 10 2.93885 3.57515 0.11855 3.47852 10 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 11 3.07610 2.58718 3.12474 0.18071 11 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 12 3.41881 0.13193 3.46887 2.81857 12 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 13 0.14354 3.36786 2.79386 3.26835 13 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 14 3.41881 0.13193 3.46887 2.81857 14 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 15 3.07610 2.58718 3.12474 0.18071 15 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 16 3.41881 0.13193 3.46887 2.81857 16 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 17 3.41881 0.13193 3.46887 2.81857 17 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 18 0.14354 3.36786 2.79386 3.26835 18 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 19 2.93885 3.57515 0.11855 3.47852 19 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 20 0.14354 3.36786 2.79386 3.26835 20 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 21 2.93885 3.57515 0.11855 3.47852 21 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 22 2.93885 3.57515 0.11855 3.47852 22 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 23 3.41881 0.13193 3.46887 2.81857 23 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 24 3.41881 0.13193 3.46887 2.81857 24 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 25 0.14354 3.36786 2.79386 3.26835 25 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 26 3.41881 0.13193 3.46887 2.81857 26 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 27 2.93885 3.57515 0.11855 3.47852 27 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 28 3.07610 2.58718 3.12474 0.18071 28 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 29 3.41881 0.13193 3.46887 2.81857 29 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 30 3.07610 2.58718 3.12474 0.18071 30 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 31 2.93885 3.57515 0.11855 3.47852 31 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 32 3.07610 2.58718 3.12474 0.18071 32 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 33 3.41881 0.13193 3.46887 2.81857 33 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 34 3.07610 2.58718 3.12474 0.18071 34 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 35 2.93885 3.57515 0.11855 3.47852 35 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 36 0.14354 3.36786 2.79386 3.26835 36 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 37 2.93885 3.57515 0.11855 3.47852 37 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 38 1.99573 3.03008 0.27322 2.90320 38 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 39 2.42471 2.07135 0.34812 2.53243 39 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 40 3.07610 2.58718 3.12474 0.18071 40 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 41 3.41881 0.13193 3.46887 2.81857 41 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 42 2.93885 3.57515 0.11855 3.47852 42 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 43 2.93885 3.57515 0.11855 3.47852 43 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 44 3.41881 0.13193 3.46887 2.81857 44 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 45 3.07610 2.58718 3.12474 0.18071 45 - - 1.38629 1.38629 1.38629 1.38629 0.01875 3.98605 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortysevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:05 2012 NSEQ 15 EFFN 3.409424 CKSUM 1562515902 STATS LOCAL MSV -7.2512 0.71932 STATS LOCAL VITERBI -7.7652 0.71932 STATS LOCAL FORWARD -4.0508 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80417 1.23325 1.19344 1.42350 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 0.00000 * 1 3.46462 0.12651 3.51274 2.85188 1 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 2 2.96653 3.61546 0.11417 3.52302 2 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 3 3.46462 0.12651 3.51274 2.85188 3 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 4 3.11633 2.61276 3.16342 0.17427 4 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 5 3.46462 0.12651 3.51274 2.85188 5 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 6 0.13833 3.40764 2.81967 3.31191 6 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 7 3.46462 0.12651 3.51274 2.85188 7 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 8 3.11633 2.61276 3.16342 0.17427 8 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 9 2.96653 3.61546 0.11417 3.52302 9 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 10 2.96653 3.61546 0.11417 3.52302 10 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 11 0.13833 3.40764 2.81967 3.31191 11 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 12 2.96653 3.61546 0.11417 3.52302 12 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 13 2.42658 1.02241 2.49809 0.75568 13 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 14 1.47909 2.20605 2.32061 0.57304 14 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 15 3.46462 0.12651 3.51274 2.85188 15 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 16 3.46462 0.12651 3.51274 2.85188 16 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 17 3.46462 0.12651 3.51274 2.85188 17 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 18 0.13833 3.40764 2.81967 3.31191 18 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 19 2.96653 3.61546 0.11417 3.52302 19 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 20 3.11633 2.61276 3.16342 0.17427 20 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 21 2.96653 3.61546 0.11417 3.52302 21 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 22 0.13833 3.40764 2.81967 3.31191 22 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 23 2.96653 3.61546 0.11417 3.52302 23 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 24 3.46462 0.12651 3.51274 2.85188 24 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 25 0.13833 3.40764 2.81967 3.31191 25 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 26 3.11633 2.61276 3.16342 0.17427 26 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 27 2.96653 3.61546 0.11417 3.52302 27 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 28 3.46462 0.12651 3.51274 2.85188 28 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 29 3.46462 0.12651 3.51274 2.85188 29 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 30 3.11633 2.61276 3.16342 0.17427 30 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 31 2.96653 3.61546 0.11417 3.52302 31 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 32 3.11633 2.61276 3.16342 0.17427 32 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 33 3.46462 0.12651 3.51274 2.85188 33 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 34 3.11633 2.61276 3.16342 0.17427 34 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 35 2.96653 3.61546 0.11417 3.52302 35 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 36 0.13833 3.40764 2.81967 3.31191 36 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 37 2.96653 3.61546 0.11417 3.52302 37 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 38 3.46462 0.12651 3.51274 2.85188 38 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 39 2.96653 3.61546 0.11417 3.52302 39 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 40 3.11633 2.61276 3.16342 0.17427 40 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 41 3.46462 0.12651 3.51274 2.85188 41 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 42 2.96653 3.61546 0.11417 3.52302 42 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 43 3.11633 2.61276 3.16342 0.17427 43 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 44 2.96653 3.61546 0.11417 3.52302 44 - - 1.38629 1.38629 1.38629 1.38629 0.03631 4.02703 4.02703 1.46634 0.26236 1.09861 0.40547 45 3.11633 2.61276 3.16342 0.17427 45 - - 1.38629 1.38629 1.38629 1.38629 0.01832 4.00905 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortysevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:50:12 2012 NSEQ 3 EFFN 3.000000 CKSUM 3961930010 STATS LOCAL MSV -8.0281 0.72000 STATS LOCAL VITERBI -7.7576 0.72000 STATS LOCAL FORWARD -3.9753 0.72000 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92209 1.20667 1.15009 1.43590 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:57 2012 NSEQ 3 EFFN 3.000000 CKSUM 1910693752 STATS LOCAL MSV -8.1780 0.72010 STATS LOCAL VITERBI -7.9339 0.72010 STATS LOCAL FORWARD -3.7083 0.72010 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04431 1.14945 1.20707 1.36788 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 3.30705 0.14631 3.36166 2.73626 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:03 2012 NSEQ 91 EFFN 3.340851 CKSUM 1476701771 STATS LOCAL MSV -8.0383 0.71932 STATS LOCAL VITERBI -7.8104 0.71932 STATS LOCAL FORWARD -3.8961 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93857 1.37910 1.13933 1.25790 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 0.00000 * 1 2.95157 3.59364 0.11652 3.49892 1 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 2 3.43979 0.12941 3.48897 2.83386 2 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 3 2.95157 3.59364 0.11652 3.49892 3 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 4 3.43979 0.12941 3.48897 2.83386 4 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 5 3.09447 2.59887 3.14240 0.17774 5 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 6 3.43979 0.12941 3.48897 2.83386 6 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 7 3.09447 2.59887 3.14240 0.17774 7 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 8 3.09447 2.59887 3.14240 0.17774 8 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 9 2.95157 3.59364 0.11652 3.49892 9 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 10 2.95157 3.59364 0.11652 3.49892 10 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 11 2.95157 3.59364 0.11652 3.49892 11 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 12 3.09447 2.59887 3.14240 0.17774 12 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 13 3.09447 2.59887 3.14240 0.17774 13 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 14 3.43979 0.12941 3.48897 2.83386 14 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 15 3.09447 2.59887 3.14240 0.17774 15 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 16 3.43979 0.12941 3.48897 2.83386 16 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 17 3.43979 0.12941 3.48897 2.83386 17 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 18 3.43979 0.12941 3.48897 2.83386 18 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 19 0.14113 3.38606 2.80569 3.28828 19 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 20 2.95157 3.59364 0.11652 3.49892 20 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 21 2.95157 3.59364 0.11652 3.49892 21 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 22 0.14113 3.38606 2.80569 3.28828 22 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 23 2.95157 3.59364 0.11652 3.49892 23 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 24 3.43979 0.12941 3.48897 2.83386 24 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 25 0.14113 3.38606 2.80569 3.28828 25 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 26 3.09447 2.59887 3.14240 0.17774 26 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 27 2.95157 3.59364 0.11652 3.49892 27 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 28 3.09447 2.59887 3.14240 0.17774 28 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 29 3.43979 0.12941 3.48897 2.83386 29 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 30 3.09447 2.59887 3.14240 0.17774 30 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 31 2.95157 3.59364 0.11652 3.49892 31 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 32 3.09447 2.59887 3.14240 0.17774 32 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 33 3.43979 0.12941 3.48897 2.83386 33 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 34 3.09447 2.59887 3.14240 0.17774 34 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 35 2.95157 3.59364 0.11652 3.49892 35 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 36 0.14113 3.38606 2.80569 3.28828 36 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 37 2.95157 3.59364 0.11652 3.49892 37 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 38 3.09447 2.59887 3.14240 0.17774 38 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 39 2.95157 3.59364 0.11652 3.49892 39 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 40 3.09447 2.59887 3.14240 0.17774 40 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 41 3.43979 0.12941 3.48897 2.83386 41 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 42 2.95157 3.59364 0.11652 3.49892 42 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 43 2.95157 3.59364 0.11652 3.49892 43 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 44 0.25356 2.90313 2.57702 2.37388 44 - - 1.38629 1.38629 1.38629 1.38629 0.03676 4.01473 4.01473 1.46634 0.26236 1.09861 0.40547 45 2.05766 2.35964 2.61577 0.35001 45 - - 1.38629 1.38629 1.38629 1.38629 0.01855 3.99652 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:12 2012 NSEQ 10 EFFN 3.344727 CKSUM 3904922218 STATS LOCAL MSV -8.0935 0.71933 STATS LOCAL VITERBI -7.7454 0.71933 STATS LOCAL FORWARD -3.8675 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05450 1.18855 1.08806 1.46832 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 0.00000 * 1 2.95243 3.59489 0.11638 3.50030 1 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 2 3.44121 0.12925 3.49033 2.83489 2 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 3 2.95243 3.59489 0.11638 3.50030 3 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 4 3.44121 0.12925 3.49033 2.83489 4 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 5 3.09571 2.59966 3.14360 0.17754 5 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 6 3.44121 0.12925 3.49033 2.83489 6 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 7 3.09571 2.59966 3.14360 0.17754 7 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 8 3.44121 0.12925 3.49033 2.83489 8 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 9 2.95243 3.59489 0.11638 3.50030 9 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 10 2.95243 3.59489 0.11638 3.50030 10 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 11 2.95243 3.59489 0.11638 3.50030 11 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 12 3.09571 2.59966 3.14360 0.17754 12 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 13 3.09571 2.59966 3.14360 0.17754 13 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 14 3.44121 0.12925 3.49033 2.83489 14 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 15 3.09571 2.59966 3.14360 0.17754 15 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 16 3.44121 0.12925 3.49033 2.83489 16 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 17 3.44121 0.12925 3.49033 2.83489 17 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 18 3.44121 0.12925 3.49033 2.83489 18 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 19 2.95243 3.59489 0.11638 3.50030 19 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 20 2.95243 3.59489 0.11638 3.50030 20 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 21 2.95243 3.59489 0.11638 3.50030 21 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 22 0.14097 3.38730 2.80649 3.28963 22 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 23 2.95243 3.59489 0.11638 3.50030 23 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 24 3.44121 0.12925 3.49033 2.83489 24 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 25 0.14097 3.38730 2.80649 3.28963 25 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 26 2.54110 0.54447 2.61246 1.31782 26 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 27 2.95243 3.59489 0.11638 3.50030 27 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 28 3.09571 2.59966 3.14360 0.17754 28 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 29 3.44121 0.12925 3.49033 2.83489 29 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 30 2.54110 0.54447 2.61246 1.31782 30 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 31 2.95243 3.59489 0.11638 3.50030 31 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 32 3.09571 2.59966 3.14360 0.17754 32 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 33 3.44121 0.12925 3.49033 2.83489 33 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 34 3.09571 2.59966 3.14360 0.17754 34 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 35 2.95243 3.59489 0.11638 3.50030 35 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 36 0.14097 3.38730 2.80649 3.28963 36 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 37 2.95243 3.59489 0.11638 3.50030 37 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 38 3.09571 2.59966 3.14360 0.17754 38 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 39 2.95243 3.59489 0.11638 3.50030 39 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 40 3.09571 2.59966 3.14360 0.17754 40 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 41 3.44121 0.12925 3.49033 2.83489 41 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 42 2.95243 3.59489 0.11638 3.50030 42 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 43 2.95243 3.59489 0.11638 3.50030 43 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 44 3.44121 0.12925 3.49033 2.83489 44 - - 1.38629 1.38629 1.38629 1.38629 0.03674 4.01543 4.01543 1.46634 0.26236 1.09861 0.40547 45 0.14097 3.38730 2.80649 3.28963 45 - - 1.38629 1.38629 1.38629 1.38629 0.01854 3.99723 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:18 2012 NSEQ 41 EFFN 3.410828 CKSUM 1774296887 STATS LOCAL MSV -7.2090 0.71932 STATS LOCAL VITERBI -7.7796 0.71932 STATS LOCAL FORWARD -3.8751 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.06490 1.38686 1.13813 1.19438 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 0.00000 * 1 2.96683 3.61590 0.11413 3.52351 1 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 2 3.46513 0.12645 3.51322 2.85225 2 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 3 2.96683 3.61590 0.11413 3.52351 3 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 4 3.46513 0.12645 3.51322 2.85225 4 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 5 3.11677 2.61304 3.16384 0.17420 5 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 6 3.46513 0.12645 3.51322 2.85225 6 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 7 3.11677 2.61304 3.16384 0.17420 7 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 8 3.11677 2.61304 3.16384 0.17420 8 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 9 2.96683 3.61590 0.11413 3.52351 9 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 10 2.96683 3.61590 0.11413 3.52351 10 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 11 2.96683 3.61590 0.11413 3.52351 11 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 12 3.11677 2.61304 3.16384 0.17420 12 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 13 3.11677 2.61304 3.16384 0.17420 13 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 14 2.77098 0.36080 2.83838 1.70505 14 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 15 3.11677 2.61304 3.16384 0.17420 15 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 16 3.46513 0.12645 3.51322 2.85225 16 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 17 3.46513 0.12645 3.51322 2.85225 17 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 18 3.46513 0.12645 3.51322 2.85225 18 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 19 0.13828 3.40807 2.81996 3.31238 19 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 20 2.96683 3.61590 0.11413 3.52351 20 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 21 2.96683 3.61590 0.11413 3.52351 21 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 22 0.13828 3.40807 2.81996 3.31238 22 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 23 2.96683 3.61590 0.11413 3.52351 23 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 24 3.46513 0.12645 3.51322 2.85225 24 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 25 0.18283 3.24670 2.46518 3.14204 25 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 26 2.86839 2.05741 2.92483 0.27214 26 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 27 2.96683 3.61590 0.11413 3.52351 27 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 28 3.11677 2.61304 3.16384 0.17420 28 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 29 3.46513 0.12645 3.51322 2.85225 29 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 30 3.11677 2.61304 3.16384 0.17420 30 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 31 2.96683 3.61590 0.11413 3.52351 31 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 32 3.11677 2.61304 3.16384 0.17420 32 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 33 3.46513 0.12645 3.51322 2.85225 33 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 34 3.11677 2.61304 3.16384 0.17420 34 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 35 2.96683 3.61590 0.11413 3.52351 35 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 36 0.13828 3.40807 2.81996 3.31238 36 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 37 2.96683 3.61590 0.11413 3.52351 37 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 38 3.11677 2.61304 3.16384 0.17420 38 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 39 2.96683 3.61590 0.11413 3.52351 39 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 40 3.11677 2.61304 3.16384 0.17420 40 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 41 3.46513 0.12645 3.51322 2.85225 41 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 42 2.96683 3.61590 0.11413 3.52351 42 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 43 2.96683 3.61590 0.11413 3.52351 43 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 44 3.11677 2.61304 3.16384 0.17420 44 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02728 4.02728 1.46634 0.26236 1.09861 0.40547 45 2.97628 2.28208 3.02857 0.22494 45 - - 1.38629 1.38629 1.38629 1.38629 0.01831 4.00930 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreed_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:26 2012 NSEQ 4 EFFN 3.417969 CKSUM 173122380 STATS LOCAL MSV -7.2851 0.71933 STATS LOCAL VITERBI -7.8107 0.71933 STATS LOCAL FORWARD -4.0662 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.06256 1.34658 1.25579 1.11508 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 0.00000 * 1 2.96836 3.61813 0.11389 3.52598 1 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 2 3.46768 0.12616 3.51566 2.85409 2 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 3 2.96836 3.61813 0.11389 3.52598 3 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 4 3.46768 0.12616 3.51566 2.85409 4 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 5 3.11902 2.61447 3.16601 0.17385 5 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 6 3.46768 0.12616 3.51566 2.85409 6 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 7 3.11902 2.61447 3.16601 0.17385 7 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 8 3.11902 2.61447 3.16601 0.17385 8 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 9 2.96836 3.61813 0.11389 3.52598 9 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 10 2.96836 3.61813 0.11389 3.52598 10 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 11 2.96836 3.61813 0.11389 3.52598 11 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 12 3.11902 2.61447 3.16601 0.17385 12 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 13 3.11902 2.61447 3.16601 0.17385 13 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 14 3.46768 0.12616 3.51566 2.85409 14 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 15 2.42235 0.95448 2.49423 0.81257 15 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 16 3.46768 0.12616 3.51566 2.85409 16 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 17 3.46768 0.12616 3.51566 2.85409 17 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 18 3.46768 0.12616 3.51566 2.85409 18 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 19 0.13799 3.41029 2.82139 3.31481 19 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 20 2.96836 3.61813 0.11389 3.52598 20 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 21 2.96836 3.61813 0.11389 3.52598 21 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 22 0.13799 3.41029 2.82139 3.31481 22 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 23 2.96836 3.61813 0.11389 3.52598 23 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 24 3.46768 0.12616 3.51566 2.85409 24 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 25 0.13799 3.41029 2.82139 3.31481 25 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 26 3.11902 2.61447 3.16601 0.17385 26 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 27 2.96836 3.61813 0.11389 3.52598 27 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 28 3.11902 2.61447 3.16601 0.17385 28 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 29 3.46768 0.12616 3.51566 2.85409 29 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 30 3.11902 2.61447 3.16601 0.17385 30 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 31 2.96836 3.61813 0.11389 3.52598 31 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 32 3.11902 2.61447 3.16601 0.17385 32 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 33 3.46768 0.12616 3.51566 2.85409 33 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 34 3.11902 2.61447 3.16601 0.17385 34 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 35 2.96836 3.61813 0.11389 3.52598 35 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 36 0.13799 3.41029 2.82139 3.31481 36 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 37 2.96836 3.61813 0.11389 3.52598 37 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 38 3.11902 2.61447 3.16601 0.17385 38 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 39 2.96836 3.61813 0.11389 3.52598 39 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 40 3.11902 2.61447 3.16601 0.17385 40 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 41 3.46768 0.12616 3.51566 2.85409 41 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 42 3.11902 2.61447 3.16601 0.17385 42 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 43 3.11902 2.61447 3.16601 0.17385 43 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 44 3.11902 2.61447 3.16601 0.17385 44 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 45 3.11902 2.61447 3.16601 0.17385 45 - - 1.38629 1.38629 1.38629 1.38629 0.01829 4.01059 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:31 2012 NSEQ 3 EFFN 3.000000 CKSUM 1591869727 STATS LOCAL MSV -8.1938 0.72015 STATS LOCAL VITERBI -7.9749 0.72015 STATS LOCAL FORWARD -3.8874 0.72015 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.91534 1.38722 1.09397 1.31656 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:36 2012 NSEQ 3 EFFN 3.000000 CKSUM 739477632 STATS LOCAL MSV -8.2192 0.72023 STATS LOCAL VITERBI -7.9047 0.72023 STATS LOCAL FORWARD -3.7271 0.72023 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.10282 1.10194 1.09601 1.55372 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.70020 2.19823 2.14894 1.28770 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreeg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:42 2012 NSEQ 2 EFFN 2.000000 CKSUM 1519089656 STATS LOCAL MSV -7.5630 0.72790 STATS LOCAL VITERBI -8.4077 0.72790 STATS LOCAL FORWARD -3.2043 0.72790 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82883 1.28308 1.21809 1.32268 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreeh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:47 2012 NSEQ 8 EFFN 3.269531 CKSUM 3808685909 STATS LOCAL MSV -8.1027 0.71933 STATS LOCAL VITERBI -7.8398 0.71933 STATS LOCAL FORWARD -3.7438 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93688 1.31183 1.25872 1.19567 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 * 1 2.93551 3.57031 0.11909 3.47317 1 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 2 3.41331 0.13259 3.46361 2.81457 2 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 3 2.93551 3.57031 0.11909 3.47317 3 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 4 3.41331 0.13259 3.46361 2.81457 4 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 5 3.07131 2.58413 3.12013 0.18149 5 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 6 3.41331 0.13259 3.46361 2.81457 6 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 7 3.41331 0.13259 3.46361 2.81457 7 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 8 3.07131 2.58413 3.12013 0.18149 8 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 9 2.93551 3.57031 0.11909 3.47317 9 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 10 2.93551 3.57031 0.11909 3.47317 10 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 11 2.93551 3.57031 0.11909 3.47317 11 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 12 3.07131 2.58413 3.12013 0.18149 12 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 13 0.14418 3.36310 2.79076 3.26314 13 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 14 3.07131 2.58413 3.12013 0.18149 14 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 15 3.07131 2.58413 3.12013 0.18149 15 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 16 3.41331 0.13259 3.46361 2.81457 16 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 17 3.41331 0.13259 3.46361 2.81457 17 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 18 3.41331 0.13259 3.46361 2.81457 18 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 19 0.14418 3.36310 2.79076 3.26314 19 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 20 2.93551 3.57031 0.11909 3.47317 20 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 21 2.93551 3.57031 0.11909 3.47317 21 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 22 0.14418 3.36310 2.79076 3.26314 22 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 23 2.93551 3.57031 0.11909 3.47317 23 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 24 3.41331 0.13259 3.46361 2.81457 24 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 25 0.14418 3.36310 2.79076 3.26314 25 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 26 3.07131 2.58413 3.12013 0.18149 26 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 27 2.93551 3.57031 0.11909 3.47317 27 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 28 3.07131 2.58413 3.12013 0.18149 28 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 29 3.41331 0.13259 3.46361 2.81457 29 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 30 3.07131 2.58413 3.12013 0.18149 30 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 31 2.93551 3.57031 0.11909 3.47317 31 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 32 3.07131 2.58413 3.12013 0.18149 32 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 33 3.41331 0.13259 3.46361 2.81457 33 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 34 3.07131 2.58413 3.12013 0.18149 34 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 35 3.41331 0.13259 3.46361 2.81457 35 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 36 0.14418 3.36310 2.79076 3.26314 36 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 37 2.93551 3.57031 0.11909 3.47317 37 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 38 3.07131 2.58413 3.12013 0.18149 38 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 39 2.93551 3.57031 0.11909 3.47317 39 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 40 3.07131 2.58413 3.12013 0.18149 40 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 41 3.41331 0.13259 3.46361 2.81457 41 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 42 2.93551 3.57031 0.11909 3.47317 42 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 43 3.07131 2.58413 3.12013 0.18149 43 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 44 3.07131 2.58413 3.12013 0.18149 44 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 45 3.07131 2.58413 3.12013 0.18149 45 - - 1.38629 1.38629 1.38629 1.38629 0.01880 3.98333 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:54 2012 NSEQ 5 EFFN 3.481445 CKSUM 3758960601 STATS LOCAL MSV -7.3778 0.71931 STATS LOCAL VITERBI -7.9054 0.71931 STATS LOCAL FORWARD -4.2141 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93383 1.31332 1.19239 1.26236 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 0.00000 * 1 2.98175 3.63775 0.11183 3.54766 1 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 2 3.49007 0.12362 3.53707 2.87028 2 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 3 2.98175 3.63775 0.11183 3.54766 3 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 4 3.49007 0.12362 3.53707 2.87028 4 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 5 3.13887 2.62707 3.18509 0.17078 5 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 6 3.49007 0.12362 3.53707 2.87028 6 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 7 2.46252 0.72637 2.53467 1.04461 7 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 8 3.49007 0.12362 3.53707 2.87028 8 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 9 3.13887 2.62707 3.18509 0.17078 9 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 10 2.98175 3.63775 0.11183 3.54766 10 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 11 2.98175 3.63775 0.11183 3.54766 11 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 12 3.13887 2.62707 3.18509 0.17078 12 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 13 3.13887 2.62707 3.18509 0.17078 13 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 14 3.49007 0.12362 3.53707 2.87028 14 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 15 3.13887 2.62707 3.18509 0.17078 15 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 16 3.49007 0.12362 3.53707 2.87028 16 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 17 3.49007 0.12362 3.53707 2.87028 17 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 18 0.13553 3.42977 2.83398 3.33617 18 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 19 2.98175 3.63775 0.11183 3.54766 19 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 20 2.98175 3.63775 0.11183 3.54766 20 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 21 2.98175 3.63775 0.11183 3.54766 21 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 22 0.13553 3.42977 2.83398 3.33617 22 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 23 2.98175 3.63775 0.11183 3.54766 23 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 24 3.49007 0.12362 3.53707 2.87028 24 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 25 0.13553 3.42977 2.83398 3.33617 25 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 26 3.13887 2.62707 3.18509 0.17078 26 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 27 2.98175 3.63775 0.11183 3.54766 27 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 28 3.13887 2.62707 3.18509 0.17078 28 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 29 2.46252 0.72637 2.53467 1.04461 29 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 30 3.13887 2.62707 3.18509 0.17078 30 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 31 2.98175 3.63775 0.11183 3.54766 31 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 32 3.13887 2.62707 3.18509 0.17078 32 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 33 3.49007 0.12362 3.53707 2.87028 33 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 34 3.13887 2.62707 3.18509 0.17078 34 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 35 2.98175 3.63775 0.11183 3.54766 35 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 36 0.13553 3.42977 2.83398 3.33617 36 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 37 2.98175 3.63775 0.11183 3.54766 37 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 38 3.49007 0.12362 3.53707 2.87028 38 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 39 2.98175 3.63775 0.11183 3.54766 39 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 40 3.13887 2.62707 3.18509 0.17078 40 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 41 3.49007 0.12362 3.53707 2.87028 41 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 42 0.13553 3.42977 2.83398 3.33617 42 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 43 3.13887 2.62707 3.18509 0.17078 43 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 44 2.98175 3.63775 0.11183 3.54766 44 - - 1.38629 1.38629 1.38629 1.38629 0.03584 4.03979 4.03979 1.46634 0.26236 1.09861 0.40547 45 3.13887 2.62707 3.18509 0.17078 45 - - 1.38629 1.38629 1.38629 1.38629 0.01808 4.02203 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:48:59 2012 NSEQ 4 EFFN 3.175781 CKSUM 3177132795 STATS LOCAL MSV -8.0711 0.71931 STATS LOCAL VITERBI -7.8271 0.71931 STATS LOCAL FORWARD -4.1706 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82240 1.26363 1.14453 1.43816 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 * 1 2.91360 3.53861 0.12268 3.43825 1 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 2 3.37748 0.13704 3.42926 2.78832 2 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 3 2.91360 3.53861 0.12268 3.43825 3 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 4 3.37748 0.13704 3.42926 2.78832 4 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 5 3.04021 2.56430 3.09020 0.18668 5 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 6 3.37748 0.13704 3.42926 2.78832 6 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 7 3.04021 2.56430 3.09020 0.18668 7 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 8 3.37748 0.13704 3.42926 2.78832 8 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 9 3.04021 2.56430 3.09020 0.18668 9 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 10 2.91360 3.53861 0.12268 3.43825 10 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 11 2.91360 3.53861 0.12268 3.43825 11 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 12 0.14843 3.33206 2.77050 3.22920 12 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 13 3.04021 2.56430 3.09020 0.18668 13 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 14 3.37748 0.13704 3.42926 2.78832 14 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 15 3.37748 0.13704 3.42926 2.78832 15 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 16 3.37748 0.13704 3.42926 2.78832 16 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 17 3.37748 0.13704 3.42926 2.78832 17 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 18 0.14843 3.33206 2.77050 3.22920 18 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 19 2.91360 3.53861 0.12268 3.43825 19 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 20 2.91360 3.53861 0.12268 3.43825 20 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 21 2.91360 3.53861 0.12268 3.43825 21 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 22 0.14843 3.33206 2.77050 3.22920 22 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 23 2.91360 3.53861 0.12268 3.43825 23 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 24 3.37748 0.13704 3.42926 2.78832 24 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 25 0.14843 3.33206 2.77050 3.22920 25 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 26 3.04021 2.56430 3.09020 0.18668 26 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 27 2.91360 3.53861 0.12268 3.43825 27 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 28 3.04021 2.56430 3.09020 0.18668 28 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 29 3.37748 0.13704 3.42926 2.78832 29 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 30 3.04021 2.56430 3.09020 0.18668 30 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 31 2.91360 3.53861 0.12268 3.43825 31 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 32 3.04021 2.56430 3.09020 0.18668 32 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 33 3.37748 0.13704 3.42926 2.78832 33 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 34 3.04021 2.56430 3.09020 0.18668 34 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 35 2.91360 3.53861 0.12268 3.43825 35 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 36 0.14843 3.33206 2.77050 3.22920 36 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 37 2.91360 3.53861 0.12268 3.43825 37 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 38 3.04021 2.56430 3.09020 0.18668 38 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 39 2.91360 3.53861 0.12268 3.43825 39 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 40 3.04021 2.56430 3.09020 0.18668 40 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 41 3.37748 0.13704 3.42926 2.78832 41 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 42 2.91360 3.53861 0.12268 3.43825 42 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 43 3.37748 0.13704 3.42926 2.78832 43 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 44 2.91360 3.53861 0.12268 3.43825 44 - - 1.38629 1.38629 1.38629 1.38629 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547 45 0.14843 3.33206 2.77050 3.22920 45 - - 1.38629 1.38629 1.38629 1.38629 0.01914 3.96571 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:03 2012 NSEQ 2 EFFN 2.000000 CKSUM 1955569616 STATS LOCAL MSV -7.4824 0.72803 STATS LOCAL VITERBI -8.2186 0.72803 STATS LOCAL FORWARD -3.5060 0.72803 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74000 1.39139 1.21494 1.27646 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:11 2012 NSEQ 4 EFFN 3.222656 CKSUM 386890201 STATS LOCAL MSV -8.1714 0.71933 STATS LOCAL VITERBI -7.7255 0.71933 STATS LOCAL FORWARD -4.3341 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82367 1.31887 1.19880 1.31091 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * 1 2.92468 3.55461 0.12085 3.45586 1 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 2 3.39555 0.13478 3.44658 2.80157 2 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 3 2.92468 3.55461 0.12085 3.45586 3 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 4 3.39555 0.13478 3.44658 2.80157 4 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 5 3.05586 2.57429 3.10526 0.18405 5 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 6 3.39555 0.13478 3.44658 2.80157 6 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 7 3.39555 0.13478 3.44658 2.80157 7 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 8 3.05586 2.57429 3.10526 0.18405 8 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 9 3.05586 2.57429 3.10526 0.18405 9 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 10 2.92468 3.55461 0.12085 3.45586 10 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 11 2.92468 3.55461 0.12085 3.45586 11 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 12 3.39555 0.13478 3.44658 2.80157 12 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 13 3.05586 2.57429 3.10526 0.18405 13 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 14 3.39555 0.13478 3.44658 2.80157 14 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 15 3.05586 2.57429 3.10526 0.18405 15 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 16 3.39555 0.13478 3.44658 2.80157 16 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 17 3.39555 0.13478 3.44658 2.80157 17 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 18 0.14627 3.34770 2.78072 3.24630 18 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 19 0.14627 3.34770 2.78072 3.24630 19 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 20 2.92468 3.55461 0.12085 3.45586 20 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 21 2.92468 3.55461 0.12085 3.45586 21 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 22 0.14627 3.34770 2.78072 3.24630 22 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 23 2.92468 3.55461 0.12085 3.45586 23 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 24 3.39555 0.13478 3.44658 2.80157 24 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 25 0.14627 3.34770 2.78072 3.24630 25 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 26 3.05586 2.57429 3.10526 0.18405 26 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 27 2.92468 3.55461 0.12085 3.45586 27 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 28 3.05586 2.57429 3.10526 0.18405 28 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 29 3.39555 0.13478 3.44658 2.80157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 30 3.05586 2.57429 3.10526 0.18405 30 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 31 2.92468 3.55461 0.12085 3.45586 31 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 32 3.05586 2.57429 3.10526 0.18405 32 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 33 3.39555 0.13478 3.44658 2.80157 33 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 34 3.05586 2.57429 3.10526 0.18405 34 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 35 2.92468 3.55461 0.12085 3.45586 35 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 36 0.14627 3.34770 2.78072 3.24630 36 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 37 2.92468 3.55461 0.12085 3.45586 37 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 38 2.92468 3.55461 0.12085 3.45586 38 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 39 2.92468 3.55461 0.12085 3.45586 39 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 40 3.05586 2.57429 3.10526 0.18405 40 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 41 3.39555 0.13478 3.44658 2.80157 41 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 42 2.92468 3.55461 0.12085 3.45586 42 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 43 0.14627 3.34770 2.78072 3.24630 43 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 44 3.05586 2.57429 3.10526 0.18405 44 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 45 3.05586 2.57429 3.10526 0.18405 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97456 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortythreem_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:49:16 2012 NSEQ 3 EFFN 3.000000 CKSUM 603423961 STATS LOCAL MSV -7.9589 0.72027 STATS LOCAL VITERBI -7.8724 0.72027 STATS LOCAL FORWARD -3.7891 0.72027 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.91615 1.38333 1.14591 1.25825 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fortytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:47:52 2012 NSEQ 2 EFFN 2.000000 CKSUM 1347837329 STATS LOCAL MSV -7.4541 0.72721 STATS LOCAL VITERBI -8.2939 0.72721 STATS LOCAL FORWARD -3.3636 0.72721 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92452 1.19705 1.08122 1.54745 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:20 2012 NSEQ 4 EFFN 3.214844 CKSUM 836289414 STATS LOCAL MSV -7.9825 0.71932 STATS LOCAL VITERBI -7.8216 0.71932 STATS LOCAL FORWARD -4.1059 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63264 1.38880 1.19625 1.37482 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 2.92285 3.55196 0.12115 3.45295 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 3.39256 0.13515 3.44371 2.79938 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 3.39256 0.13515 3.44371 2.79938 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 0.14663 3.34511 2.77903 3.24347 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 3.05326 2.57263 3.10276 0.18448 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 3.05326 2.57263 3.10276 0.18448 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 2.92285 3.55196 0.12115 3.45295 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 2.92285 3.55196 0.12115 3.45295 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 0.14663 3.34511 2.77903 3.24347 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 2.92285 3.55196 0.12115 3.45295 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 3.05326 2.57263 3.10276 0.18448 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 2.92285 3.55196 0.12115 3.45295 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 0.14663 3.34511 2.77903 3.24347 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.39256 0.13515 3.44371 2.79938 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 0.14663 3.34511 2.77903 3.24347 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 3.05326 2.57263 3.10276 0.18448 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 3.39256 0.13515 3.44371 2.79938 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 3.39256 0.13515 3.44371 2.79938 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 3.05326 2.57263 3.10276 0.18448 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 3.05326 2.57263 3.10276 0.18448 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 3.05326 2.57263 3.10276 0.18448 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 2.92285 3.55196 0.12115 3.45295 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 2.92285 3.55196 0.12115 3.45295 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 3.39256 0.13515 3.44371 2.79938 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 0.14663 3.34511 2.77903 3.24347 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.39256 0.13515 3.44371 2.79938 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 2.92285 3.55196 0.12115 3.45295 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.05326 2.57263 3.10276 0.18448 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 2.92285 3.55196 0.12115 3.45295 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 2.92285 3.55196 0.12115 3.45295 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.05326 2.57263 3.10276 0.18448 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 3.05326 2.57263 3.10276 0.18448 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 3.39256 0.13515 3.44371 2.79938 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 0.14663 3.34511 2.77903 3.24347 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 2.92285 3.55196 0.12115 3.45295 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 2.92285 3.55196 0.12115 3.45295 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 2.92285 3.55196 0.12115 3.45295 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 3.05326 2.57263 3.10276 0.18448 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 3.39256 0.13515 3.44371 2.79938 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 2.92285 3.55196 0.12115 3.45295 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 3.05326 2.57263 3.10276 0.18448 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 0.14663 3.34511 2.77903 3.24347 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 0.14663 3.34511 2.77903 3.24347 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:26 2012 NSEQ 7 EFFN 3.599121 CKSUM 4220224434 STATS LOCAL MSV -7.4100 0.71932 STATS LOCAL VITERBI -7.8550 0.71932 STATS LOCAL FORWARD -4.0872 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.57621 1.40156 1.22724 1.37070 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 0.00000 * 1 3.00563 3.67283 0.10826 3.58650 1 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 2 3.53025 0.11920 3.57549 2.89920 2 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 3 3.53025 0.11920 3.57549 2.89920 3 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 4 0.13122 3.46482 2.85658 3.37461 4 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 5 3.17479 2.64985 3.21962 0.16539 5 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 6 3.17479 2.64985 3.21962 0.16539 6 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 7 3.00563 3.67283 0.10826 3.58650 7 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 8 3.00563 3.67283 0.10826 3.58650 8 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 9 0.13122 3.46482 2.85658 3.37461 9 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 10 3.00563 3.67283 0.10826 3.58650 10 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 11 3.17479 2.64985 3.21962 0.16539 11 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 12 2.15344 2.17550 1.15822 0.78456 12 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 13 0.13122 3.46482 2.85658 3.37461 13 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 14 2.63062 0.48844 2.70064 1.39746 14 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 15 0.13122 3.46482 2.85658 3.37461 15 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 16 3.17479 2.64985 3.21962 0.16539 16 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 17 3.53025 0.11920 3.57549 2.89920 17 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 18 3.53025 0.11920 3.57549 2.89920 18 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 19 0.13122 3.46482 2.85658 3.37461 19 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 20 3.17479 2.64985 3.21962 0.16539 20 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 21 3.17479 2.64985 3.21962 0.16539 21 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 22 3.00563 3.67283 0.10826 3.58650 22 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 23 3.00563 3.67283 0.10826 3.58650 23 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 24 3.53025 0.11920 3.57549 2.89920 24 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 25 0.13122 3.46482 2.85658 3.37461 25 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 26 3.53025 0.11920 3.57549 2.89920 26 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 27 3.00563 3.67283 0.10826 3.58650 27 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 28 3.53025 0.11920 3.57549 2.89920 28 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 29 3.53025 0.11920 3.57549 2.89920 29 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 30 3.17479 2.64985 3.21962 0.16539 30 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 31 3.00563 3.67283 0.10826 3.58650 31 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 32 3.00563 3.67283 0.10826 3.58650 32 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 33 3.17479 2.64985 3.21962 0.16539 33 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 34 3.17479 2.64985 3.21962 0.16539 34 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 35 3.53025 0.11920 3.57549 2.89920 35 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 36 0.13122 3.46482 2.85658 3.37461 36 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 37 3.00563 3.67283 0.10826 3.58650 37 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 38 3.00563 3.67283 0.10826 3.58650 38 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 39 3.00563 3.67283 0.10826 3.58650 39 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 40 3.17479 2.64985 3.21962 0.16539 40 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 41 3.53025 0.11920 3.57549 2.89920 41 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 42 3.00563 3.67283 0.10826 3.58650 42 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 43 3.17479 2.64985 3.21962 0.16539 43 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 44 0.57751 2.35639 2.27395 1.42279 44 - - 1.38629 1.38629 1.38629 1.38629 0.03510 4.06029 4.06029 1.46634 0.26236 1.09861 0.40547 45 0.13122 3.46482 2.85658 3.37461 45 - - 1.38629 1.38629 1.38629 1.38629 0.01770 4.04290 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:33 2012 NSEQ 2 EFFN 2.000000 CKSUM 40021466 STATS LOCAL MSV -7.4793 0.72812 STATS LOCAL VITERBI -8.4338 0.72812 STATS LOCAL FORWARD -3.4958 0.72812 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66120 1.39035 1.26616 1.27587 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_foure_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:42 2012 NSEQ 11 EFFN 3.316650 CKSUM 2161723841 STATS LOCAL MSV -8.0237 0.71932 STATS LOCAL VITERBI -7.7980 0.71932 STATS LOCAL FORWARD -4.4690 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62968 1.39846 1.25461 1.30253 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 * 1 0.14215 3.37833 2.80067 3.27981 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 2 3.43088 0.13047 3.48043 2.82738 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 3 3.43088 0.13047 3.48043 2.82738 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 4 0.14215 3.37833 2.80067 3.27981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 5 3.08666 2.59390 3.13489 0.17899 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 6 2.94618 3.58579 0.11737 3.49026 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 7 2.94618 3.58579 0.11737 3.49026 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 8 2.94618 3.58579 0.11737 3.49026 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 9 0.14215 3.37833 2.80067 3.27981 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 10 2.94618 3.58579 0.11737 3.49026 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 11 3.08666 2.59390 3.13489 0.17899 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 12 3.43088 0.13047 3.48043 2.82738 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 13 3.08666 2.59390 3.13489 0.17899 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 14 3.08666 2.59390 3.13489 0.17899 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 15 0.14215 3.37833 2.80067 3.27981 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 16 3.08666 2.59390 3.13489 0.17899 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 17 3.43088 0.13047 3.48043 2.82738 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 18 3.43088 0.13047 3.48043 2.82738 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 19 3.43088 0.13047 3.48043 2.82738 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 20 3.08666 2.59390 3.13489 0.17899 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 21 3.08666 2.59390 3.13489 0.17899 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 22 2.94618 3.58579 0.11737 3.49026 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 23 2.94618 3.58579 0.11737 3.49026 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 24 3.08666 2.59390 3.13489 0.17899 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 25 0.14215 3.37833 2.80067 3.27981 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 26 2.79049 0.34167 2.85747 1.76836 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 27 2.94618 3.58579 0.11737 3.49026 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 28 3.43088 0.13047 3.48043 2.82738 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 29 3.43088 0.13047 3.48043 2.82738 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 30 3.08666 2.59390 3.13489 0.17899 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 31 2.94618 3.58579 0.11737 3.49026 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 32 2.94618 3.58579 0.11737 3.49026 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 33 3.08666 2.59390 3.13489 0.17899 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 34 3.08666 2.59390 3.13489 0.17899 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 35 3.43088 0.13047 3.48043 2.82738 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 36 0.14215 3.37833 2.80067 3.27981 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 37 2.94618 3.58579 0.11737 3.49026 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 38 2.94618 3.58579 0.11737 3.49026 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 39 2.94618 3.58579 0.11737 3.49026 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 40 3.08666 2.59390 3.13489 0.17899 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 41 3.43088 0.13047 3.48043 2.82738 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 42 2.94618 3.58579 0.11737 3.49026 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 43 3.08666 2.59390 3.13489 0.17899 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 44 0.14215 3.37833 2.80067 3.27981 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 45 0.14215 3.37833 2.80067 3.27981 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:48 2012 NSEQ 4 EFFN 3.128906 CKSUM 1932922209 STATS LOCAL MSV -8.1150 0.71933 STATS LOCAL VITERBI -7.8447 0.71933 STATS LOCAL FORWARD -3.8141 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47448 1.33557 1.14043 1.66912 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 * 1 2.90228 3.52232 0.12458 3.42031 1 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 2 3.35912 0.13939 3.41165 2.77481 2 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 3 3.35912 0.13939 3.41165 2.77481 3 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 4 0.15066 3.31617 2.76009 3.21184 4 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 5 3.35912 0.13939 3.41165 2.77481 5 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 6 3.35912 0.13939 3.41165 2.77481 6 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 7 2.90228 3.52232 0.12458 3.42031 7 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 8 2.90228 3.52232 0.12458 3.42031 8 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 9 0.15066 3.31617 2.76009 3.21184 9 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 10 2.90228 3.52232 0.12458 3.42031 10 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 11 3.02437 2.55419 3.07496 0.18939 11 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 12 0.15066 3.31617 2.76009 3.21184 12 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 13 0.15066 3.31617 2.76009 3.21184 13 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 14 3.35912 0.13939 3.41165 2.77481 14 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 15 0.15066 3.31617 2.76009 3.21184 15 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 16 3.02437 2.55419 3.07496 0.18939 16 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 17 3.35912 0.13939 3.41165 2.77481 17 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 18 0.15066 3.31617 2.76009 3.21184 18 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 19 2.90228 3.52232 0.12458 3.42031 19 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 20 2.90228 3.52232 0.12458 3.42031 20 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 21 3.02437 2.55419 3.07496 0.18939 21 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 22 2.90228 3.52232 0.12458 3.42031 22 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 23 2.90228 3.52232 0.12458 3.42031 23 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 24 3.35912 0.13939 3.41165 2.77481 24 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 25 0.15066 3.31617 2.76009 3.21184 25 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 26 3.35912 0.13939 3.41165 2.77481 26 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 27 2.90228 3.52232 0.12458 3.42031 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 28 3.02437 2.55419 3.07496 0.18939 28 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 29 3.35912 0.13939 3.41165 2.77481 29 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 30 3.02437 2.55419 3.07496 0.18939 30 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 31 2.90228 3.52232 0.12458 3.42031 31 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 32 2.90228 3.52232 0.12458 3.42031 32 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 33 3.02437 2.55419 3.07496 0.18939 33 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 34 3.02437 2.55419 3.07496 0.18939 34 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 35 3.35912 0.13939 3.41165 2.77481 35 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 36 0.15066 3.31617 2.76009 3.21184 36 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 37 2.90228 3.52232 0.12458 3.42031 37 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 38 2.90228 3.52232 0.12458 3.42031 38 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 39 2.90228 3.52232 0.12458 3.42031 39 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 40 3.02437 2.55419 3.07496 0.18939 40 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 41 3.35912 0.13939 3.41165 2.77481 41 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 42 2.90228 3.52232 0.12458 3.42031 42 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 43 0.15066 3.31617 2.76009 3.21184 43 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 44 3.35912 0.13939 3.41165 2.77481 44 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547 45 0.15066 3.31617 2.76009 3.21184 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95679 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:53 2012 NSEQ 5 EFFN 3.393555 CKSUM 2530162273 STATS LOCAL MSV -7.5822 0.71932 STATS LOCAL VITERBI -7.7538 0.71932 STATS LOCAL FORWARD -4.3816 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59593 1.37767 1.31214 1.28782 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 0.00000 * 1 2.96311 3.61046 0.11471 3.51750 1 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 2 3.45893 0.12717 3.50729 2.84776 2 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 3 3.45893 0.12717 3.50729 2.84776 3 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 4 0.13897 3.40269 2.81647 3.30648 4 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 5 3.11130 2.60957 3.15859 0.17506 5 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 6 3.11130 2.60957 3.15859 0.17506 6 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 7 2.96311 3.61046 0.11471 3.51750 7 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 8 2.96311 3.61046 0.11471 3.51750 8 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 9 0.13897 3.40269 2.81647 3.30648 9 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 10 2.96311 3.61046 0.11471 3.51750 10 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 11 3.45893 0.12717 3.50729 2.84776 11 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 12 0.13897 3.40269 2.81647 3.30648 12 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 13 0.13897 3.40269 2.81647 3.30648 13 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 14 3.11130 2.60957 3.15859 0.17506 14 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 15 0.13897 3.40269 2.81647 3.30648 15 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 16 3.11130 2.60957 3.15859 0.17506 16 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 17 3.45893 0.12717 3.50729 2.84776 17 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 18 3.45893 0.12717 3.50729 2.84776 18 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 19 3.11130 2.60957 3.15859 0.17506 19 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 20 3.11130 2.60957 3.15859 0.17506 20 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 21 3.11130 2.60957 3.15859 0.17506 21 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 22 2.96311 3.61046 0.11471 3.51750 22 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 23 2.96311 3.61046 0.11471 3.51750 23 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 24 3.45893 0.12717 3.50729 2.84776 24 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 25 0.13897 3.40269 2.81647 3.30648 25 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 26 3.11130 2.60957 3.15859 0.17506 26 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 27 2.96311 3.61046 0.11471 3.51750 27 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 28 3.45893 0.12717 3.50729 2.84776 28 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 29 3.11130 2.60957 3.15859 0.17506 29 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 30 3.11130 2.60957 3.15859 0.17506 30 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 31 3.11130 2.60957 3.15859 0.17506 31 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 32 2.96311 3.61046 0.11471 3.51750 32 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 33 3.45893 0.12717 3.50729 2.84776 33 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 34 3.11130 2.60957 3.15859 0.17506 34 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 35 3.45893 0.12717 3.50729 2.84776 35 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 36 0.13897 3.40269 2.81647 3.30648 36 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 37 2.96311 3.61046 0.11471 3.51750 37 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 38 2.96311 3.61046 0.11471 3.51750 38 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 39 2.96311 3.61046 0.11471 3.51750 39 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 40 3.11130 2.60957 3.15859 0.17506 40 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 41 3.45893 0.12717 3.50729 2.84776 41 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 42 2.96311 3.61046 0.11471 3.51750 42 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 43 3.45893 0.12717 3.50729 2.84776 43 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 44 0.13897 3.40269 2.81647 3.30648 44 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 45 0.79222 2.19683 2.17515 1.13191 45 - - 1.38629 1.38629 1.38629 1.38629 0.01837 4.00616 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:01 2012 NSEQ 2 EFFN 2.000000 CKSUM 333148079 STATS LOCAL MSV -7.4549 0.72791 STATS LOCAL VITERBI -8.4904 0.72791 STATS LOCAL FORWARD -3.4224 0.72791 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74078 1.33732 1.21673 1.32475 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.53331 3.02441 0.20344 2.88069 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fouri_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:06 2012 NSEQ 2 EFFN 2.000000 CKSUM 260246692 STATS LOCAL MSV -7.3876 0.72866 STATS LOCAL VITERBI -8.2977 0.72866 STATS LOCAL FORWARD -3.4092 0.72866 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.79394 1.27631 1.26577 1.29972 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 1.03732 1.95876 1.96551 1.00928 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:11 2012 NSEQ 2 EFFN 2.000000 CKSUM 1948886469 STATS LOCAL MSV -7.4799 0.72830 STATS LOCAL VITERBI -8.3137 0.72830 STATS LOCAL FORWARD -3.4645 0.72830 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82855 1.27493 1.32534 1.22353 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourk_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:16 2012 NSEQ 9 EFFN 3.247559 CKSUM 3053590484 STATS LOCAL MSV -7.9269 0.71933 STATS LOCAL VITERBI -7.7723 0.71933 STATS LOCAL FORWARD -3.9915 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63624 1.31777 1.31835 1.30940 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 0.00000 * 1 2.93046 3.56298 0.11991 3.46510 1 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 2 3.40502 0.13361 3.45566 2.80851 2 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 3 3.40502 0.13361 3.45566 2.80851 3 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 4 0.14515 3.35591 2.78608 3.25528 4 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 5 3.06409 2.57953 3.11318 0.18268 5 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 6 3.06409 2.57953 3.11318 0.18268 6 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 7 2.93046 3.56298 0.11991 3.46510 7 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 8 2.93046 3.56298 0.11991 3.46510 8 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 9 0.14515 3.35591 2.78608 3.25528 9 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 10 2.93046 3.56298 0.11991 3.46510 10 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 11 3.06409 2.57953 3.11318 0.18268 11 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 12 3.40502 0.13361 3.45566 2.80851 12 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 13 0.14515 3.35591 2.78608 3.25528 13 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 14 3.40502 0.13361 3.45566 2.80851 14 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 15 3.06409 2.57953 3.11318 0.18268 15 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 16 3.06409 2.57953 3.11318 0.18268 16 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 17 3.40502 0.13361 3.45566 2.80851 17 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 18 3.40502 0.13361 3.45566 2.80851 18 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 19 3.06409 2.57953 3.11318 0.18268 19 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 20 0.14515 3.35591 2.78608 3.25528 20 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 21 3.06409 2.57953 3.11318 0.18268 21 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 22 2.93046 3.56298 0.11991 3.46510 22 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 23 2.93046 3.56298 0.11991 3.46510 23 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 24 3.40502 0.13361 3.45566 2.80851 24 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 25 0.14515 3.35591 2.78608 3.25528 25 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 26 3.40502 0.13361 3.45566 2.80851 26 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 27 2.93046 3.56298 0.11991 3.46510 27 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 28 3.40502 0.13361 3.45566 2.80851 28 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 29 3.40502 0.13361 3.45566 2.80851 29 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 30 3.06409 2.57953 3.11318 0.18268 30 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 31 2.93046 3.56298 0.11991 3.46510 31 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 32 2.93046 3.56298 0.11991 3.46510 32 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 33 3.06409 2.57953 3.11318 0.18268 33 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 34 3.06409 2.57953 3.11318 0.18268 34 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 35 3.40502 0.13361 3.45566 2.80851 35 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 36 0.14515 3.35591 2.78608 3.25528 36 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 37 2.93046 3.56298 0.11991 3.46510 37 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 38 2.93046 3.56298 0.11991 3.46510 38 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 39 2.93046 3.56298 0.11991 3.46510 39 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 40 3.06409 2.57953 3.11318 0.18268 40 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 41 3.40502 0.13361 3.45566 2.80851 41 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 42 0.14515 3.35591 2.78608 3.25528 42 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 43 3.06409 2.57953 3.11318 0.18268 43 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 44 3.06409 2.57953 3.11318 0.18268 44 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 45 0.14515 3.35591 2.78608 3.25528 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97923 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourl_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:21 2012 NSEQ 11 EFFN 3.338135 CKSUM 767105334 STATS LOCAL MSV -8.1570 0.71932 STATS LOCAL VITERBI -7.7500 0.71932 STATS LOCAL FORWARD -4.0357 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55301 1.25359 1.40308 1.35840 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 0.00000 * 1 2.95097 3.59276 0.11661 3.49795 1 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 2 3.43879 0.12953 3.48801 2.83314 2 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 3 3.43879 0.12953 3.48801 2.83314 3 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 4 0.14124 3.38520 2.80513 3.28733 4 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 5 3.09359 2.59831 3.14156 0.17788 5 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 6 3.09359 2.59831 3.14156 0.17788 6 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 7 2.95097 3.59276 0.11661 3.49795 7 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 8 2.95097 3.59276 0.11661 3.49795 8 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 9 0.14124 3.38520 2.80513 3.28733 9 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 10 3.09359 2.59831 3.14156 0.17788 10 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 11 3.09359 2.59831 3.14156 0.17788 11 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 12 3.43879 0.12953 3.48801 2.83314 12 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 13 0.14124 3.38520 2.80513 3.28733 13 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 14 3.43879 0.12953 3.48801 2.83314 14 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 15 0.14124 3.38520 2.80513 3.28733 15 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 16 3.09359 2.59831 3.14156 0.17788 16 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 17 3.43879 0.12953 3.48801 2.83314 17 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 18 3.43879 0.12953 3.48801 2.83314 18 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 19 3.09359 2.59831 3.14156 0.17788 19 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 20 3.43879 0.12953 3.48801 2.83314 20 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 21 3.09359 2.59831 3.14156 0.17788 21 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 22 2.95097 3.59276 0.11661 3.49795 22 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 23 2.95097 3.59276 0.11661 3.49795 23 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 24 3.43879 0.12953 3.48801 2.83314 24 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 25 0.14124 3.38520 2.80513 3.28733 25 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 26 3.43879 0.12953 3.48801 2.83314 26 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 27 2.95097 3.59276 0.11661 3.49795 27 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 28 3.43879 0.12953 3.48801 2.83314 28 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 29 3.43879 0.12953 3.48801 2.83314 29 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 30 3.09359 2.59831 3.14156 0.17788 30 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 31 2.95097 3.59276 0.11661 3.49795 31 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 32 2.95097 3.59276 0.11661 3.49795 32 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 33 3.09359 2.59831 3.14156 0.17788 33 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 34 3.09359 2.59831 3.14156 0.17788 34 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 35 3.43879 0.12953 3.48801 2.83314 35 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 36 0.14124 3.38520 2.80513 3.28733 36 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 37 2.95097 3.59276 0.11661 3.49795 37 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 38 2.95097 3.59276 0.11661 3.49795 38 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 39 2.37704 2.60293 0.39274 1.84572 39 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 40 3.09359 2.59831 3.14156 0.17788 40 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 41 3.43879 0.12953 3.48801 2.83314 41 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 42 0.14124 3.38520 2.80513 3.28733 42 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 43 3.09359 2.59831 3.14156 0.17788 43 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 44 0.14124 3.38520 2.80513 3.28733 44 - - 1.38629 1.38629 1.38629 1.38629 0.03678 4.01424 4.01424 1.46634 0.26236 1.09861 0.40547 45 0.14124 3.38520 2.80513 3.28733 45 - - 1.38629 1.38629 1.38629 1.38629 0.01856 3.99602 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourm_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:27 2012 NSEQ 3 EFFN 3.000000 CKSUM 2504187717 STATS LOCAL MSV -8.1581 0.72043 STATS LOCAL VITERBI -8.0441 0.72043 STATS LOCAL FORWARD -4.0704 0.72043 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.71119 1.52314 1.19729 1.20627 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourn_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:32 2012 NSEQ 3 EFFN 3.000000 CKSUM 4061062390 STATS LOCAL MSV -7.9683 0.72135 STATS LOCAL VITERBI -7.9020 0.72135 STATS LOCAL FORWARD -4.0040 0.72135 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.87942 1.46963 1.21765 1.13511 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 1.35471 2.59260 0.54349 2.44834 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.43440 0.61908 2.50724 1.22957 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fouro_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:37 2012 NSEQ 2 EFFN 2.000000 CKSUM 1042054282 STATS LOCAL MSV -7.6481 0.72791 STATS LOCAL VITERBI -8.4383 0.72791 STATS LOCAL FORWARD -3.5360 0.72791 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45660 1.45908 1.26148 1.38116 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourp_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:42 2012 NSEQ 2 EFFN 2.000000 CKSUM 3357078393 STATS LOCAL MSV -7.3153 0.72879 STATS LOCAL VITERBI -8.3213 0.72879 STATS LOCAL FORWARD -3.5251 0.72879 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73799 1.30923 1.32025 1.24818 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.15554 1.00938 2.23102 0.88601 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:47 2012 NSEQ 4 EFFN 3.324219 CKSUM 3293610726 STATS LOCAL MSV -7.9677 0.71933 STATS LOCAL VITERBI -7.8423 0.71933 STATS LOCAL FORWARD -4.3589 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63635 1.44298 1.38451 1.14368 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 * 1 3.43368 0.13014 3.48311 2.82941 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 2 2.94787 3.58826 0.11710 3.49298 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 3 3.43368 0.13014 3.48311 2.82941 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 4 3.43368 0.13014 3.48311 2.82941 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 5 0.14183 3.38076 2.80224 3.28247 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 6 3.08911 2.59546 3.13724 0.17860 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 7 3.08911 2.59546 3.13724 0.17860 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 8 2.94787 3.58826 0.11710 3.49298 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 9 2.94787 3.58826 0.11710 3.49298 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 10 0.14183 3.38076 2.80224 3.28247 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 11 3.08911 2.59546 3.13724 0.17860 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 12 3.08911 2.59546 3.13724 0.17860 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 13 3.08911 2.59546 3.13724 0.17860 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 14 3.08911 2.59546 3.13724 0.17860 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 15 0.14183 3.38076 2.80224 3.28247 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 16 3.08911 2.59546 3.13724 0.17860 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 17 3.43368 0.13014 3.48311 2.82941 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 18 3.43368 0.13014 3.48311 2.82941 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 19 3.08911 2.59546 3.13724 0.17860 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 20 3.08911 2.59546 3.13724 0.17860 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 21 3.08911 2.59546 3.13724 0.17860 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 22 2.94787 3.58826 0.11710 3.49298 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 23 2.94787 3.58826 0.11710 3.49298 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 24 3.43368 0.13014 3.48311 2.82941 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 25 0.14183 3.38076 2.80224 3.28247 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 26 3.43368 0.13014 3.48311 2.82941 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 27 2.94787 3.58826 0.11710 3.49298 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 28 3.08911 2.59546 3.13724 0.17860 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 29 3.43368 0.13014 3.48311 2.82941 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 30 3.08911 2.59546 3.13724 0.17860 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 31 2.94787 3.58826 0.11710 3.49298 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 32 0.14183 3.38076 2.80224 3.28247 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 33 3.08911 2.59546 3.13724 0.17860 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 34 3.08911 2.59546 3.13724 0.17860 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 35 3.43368 0.13014 3.48311 2.82941 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 36 0.14183 3.38076 2.80224 3.28247 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 37 2.94787 3.58826 0.11710 3.49298 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 38 2.94787 3.58826 0.11710 3.49298 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 39 2.94787 3.58826 0.11710 3.49298 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 40 3.08911 2.59546 3.13724 0.17860 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 41 3.43368 0.13014 3.48311 2.82941 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 42 2.94787 3.58826 0.11710 3.49298 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 43 3.08911 2.59546 3.13724 0.17860 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 44 0.14183 3.38076 2.80224 3.28247 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 45 0.14183 3.38076 2.80224 3.28247 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99346 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourr_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:52 2012 NSEQ 3 EFFN 3.000000 CKSUM 865624913 STATS LOCAL MSV -8.0392 0.72080 STATS LOCAL VITERBI -7.7818 0.72080 STATS LOCAL FORWARD -4.1310 0.72080 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54500 1.36606 1.37837 1.27443 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.43088 1.34923 2.50068 0.56112 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fours_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:33:57 2012 NSEQ 6 EFFN 3.454102 CKSUM 1542454552 STATS LOCAL MSV -7.5502 0.71932 STATS LOCAL VITERBI -7.9280 0.71932 STATS LOCAL FORWARD -4.1162 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.91213 1.23481 1.25281 1.28865 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 0.00000 * 1 2.97603 3.62936 0.11271 3.53839 1 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 2 3.48048 0.12470 3.52791 2.86336 2 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 3 3.48048 0.12470 3.52791 2.86336 3 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 4 3.13036 2.62167 3.17691 0.17209 4 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 5 3.13036 2.62167 3.17691 0.17209 5 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 6 2.97603 3.62936 0.11271 3.53839 6 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 7 2.97603 3.62936 0.11271 3.53839 7 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 8 2.97603 3.62936 0.11271 3.53839 8 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 9 0.13658 3.42143 2.82860 3.32702 9 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 10 2.53075 1.35523 2.59881 0.53077 10 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 11 3.48048 0.12470 3.52791 2.86336 11 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 12 3.13036 2.62167 3.17691 0.17209 12 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 13 0.13658 3.42143 2.82860 3.32702 13 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 14 3.48048 0.12470 3.52791 2.86336 14 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 15 0.13658 3.42143 2.82860 3.32702 15 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 16 3.13036 2.62167 3.17691 0.17209 16 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 17 3.48048 0.12470 3.52791 2.86336 17 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 18 3.48048 0.12470 3.52791 2.86336 18 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 19 3.48048 0.12470 3.52791 2.86336 19 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 20 3.13036 2.62167 3.17691 0.17209 20 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 21 3.13036 2.62167 3.17691 0.17209 21 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 22 2.97603 3.62936 0.11271 3.53839 22 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 23 2.97603 3.62936 0.11271 3.53839 23 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 24 3.48048 0.12470 3.52791 2.86336 24 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 25 0.13658 3.42143 2.82860 3.32702 25 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 26 3.48048 0.12470 3.52791 2.86336 26 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 27 2.97603 3.62936 0.11271 3.53839 27 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 28 3.48048 0.12470 3.52791 2.86336 28 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 29 3.48048 0.12470 3.52791 2.86336 29 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 30 3.13036 2.62167 3.17691 0.17209 30 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 31 2.97603 3.62936 0.11271 3.53839 31 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 32 2.97603 3.62936 0.11271 3.53839 32 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 33 3.13036 2.62167 3.17691 0.17209 33 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 34 3.13036 2.62167 3.17691 0.17209 34 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 35 3.48048 0.12470 3.52791 2.86336 35 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 36 0.13658 3.42143 2.82860 3.32702 36 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 37 2.97603 3.62936 0.11271 3.53839 37 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 38 2.97603 3.62936 0.11271 3.53839 38 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 39 2.97603 3.62936 0.11271 3.53839 39 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 40 3.13036 2.62167 3.17691 0.17209 40 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 41 3.48048 0.12470 3.52791 2.86336 41 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 42 2.97603 3.62936 0.11271 3.53839 42 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 43 3.13036 2.62167 3.17691 0.17209 43 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 44 1.31680 2.17756 2.25927 0.66502 44 - - 1.38629 1.38629 1.38629 1.38629 0.03601 4.03497 4.03497 1.46634 0.26236 1.09861 0.40547 45 3.13036 2.62167 3.17691 0.17209 45 - - 1.38629 1.38629 1.38629 1.38629 0.01817 4.01712 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourt_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:34:02 2012 NSEQ 6 EFFN 3.225586 CKSUM 1438411373 STATS LOCAL MSV -8.1763 0.71932 STATS LOCAL VITERBI -7.7716 0.71932 STATS LOCAL FORWARD -3.7753 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72081 1.45719 1.14065 1.31462 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 0.00000 * 1 2.92536 3.55560 0.12074 3.45696 1 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 2 3.39667 0.13464 3.44765 2.80239 2 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 3 3.39667 0.13464 3.44765 2.80239 3 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 4 3.05683 2.57491 3.10619 0.18389 4 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 5 2.92536 3.55560 0.12074 3.45696 5 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 6 0.14614 3.34867 2.78135 3.24736 6 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 7 2.92536 3.55560 0.12074 3.45696 7 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 8 2.92536 3.55560 0.12074 3.45696 8 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 9 3.05683 2.57491 3.10619 0.18389 9 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 10 2.92536 3.55560 0.12074 3.45696 10 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 11 3.05683 2.57491 3.10619 0.18389 11 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 12 3.05683 2.57491 3.10619 0.18389 12 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 13 0.14614 3.34867 2.78135 3.24736 13 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 14 0.14614 3.34867 2.78135 3.24736 14 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 15 0.14614 3.34867 2.78135 3.24736 15 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 16 3.05683 2.57491 3.10619 0.18389 16 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 17 3.39667 0.13464 3.44765 2.80239 17 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 18 3.39667 0.13464 3.44765 2.80239 18 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 19 3.05683 2.57491 3.10619 0.18389 19 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 20 3.39667 0.13464 3.44765 2.80239 20 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 21 3.05683 2.57491 3.10619 0.18389 21 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 22 2.92536 3.55560 0.12074 3.45696 22 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 23 2.92536 3.55560 0.12074 3.45696 23 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 24 3.39667 0.13464 3.44765 2.80239 24 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 25 0.14614 3.34867 2.78135 3.24736 25 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 26 3.39667 0.13464 3.44765 2.80239 26 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 27 2.92536 3.55560 0.12074 3.45696 27 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 28 2.92536 3.55560 0.12074 3.45696 28 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 29 3.39667 0.13464 3.44765 2.80239 29 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 30 3.05683 2.57491 3.10619 0.18389 30 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 31 2.92536 3.55560 0.12074 3.45696 31 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 32 2.92536 3.55560 0.12074 3.45696 32 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 33 3.05683 2.57491 3.10619 0.18389 33 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 34 3.05683 2.57491 3.10619 0.18389 34 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 35 3.39667 0.13464 3.44765 2.80239 35 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 36 0.14614 3.34867 2.78135 3.24736 36 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 37 2.92536 3.55560 0.12074 3.45696 37 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 38 2.92536 3.55560 0.12074 3.45696 38 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 39 2.92536 3.55560 0.12074 3.45696 39 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 40 3.05683 2.57491 3.10619 0.18389 40 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 41 3.39667 0.13464 3.44765 2.80239 41 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 42 2.92536 3.55560 0.12074 3.45696 42 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 43 3.05683 2.57491 3.10619 0.18389 43 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 44 3.05683 2.57491 3.10619 0.18389 44 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99371 3.99371 1.46634 0.26236 1.09861 0.40547 45 0.14614 3.34867 2.78135 3.24736 45 - - 1.38629 1.38629 1.38629 1.38629 0.01896 3.97511 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:24 2012 NSEQ 13 EFFN 3.526123 CKSUM 2258401781 STATS LOCAL MSV -7.2688 0.71933 STATS LOCAL VITERBI -7.6651 0.71933 STATS LOCAL FORWARD -4.0404 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.36154 2.16683 1.28426 1.04316 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 0.00000 * 1 3.15264 2.63580 3.19832 0.16869 1 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 2 0.13385 3.44324 2.84268 3.35093 2 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 3 3.15264 2.63580 3.19832 0.16869 3 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 4 3.15264 2.63580 3.19832 0.16869 4 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 5 3.15264 2.63580 3.19832 0.16869 5 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 6 0.13385 3.44324 2.84268 3.35093 6 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 7 2.99096 3.65126 0.11044 3.56262 7 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 8 3.15264 2.63580 3.19832 0.16869 8 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 9 3.15264 2.63580 3.19832 0.16869 9 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 10 0.13385 3.44324 2.84268 3.35093 10 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 11 2.99096 3.65126 0.11044 3.56262 11 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 12 0.75959 2.55517 1.00847 2.41146 12 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 13 0.13385 3.44324 2.84268 3.35093 13 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 14 3.15264 2.63580 3.19832 0.16869 14 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 15 2.99096 3.65126 0.11044 3.56262 15 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 16 2.99096 3.65126 0.11044 3.56262 16 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 17 3.50552 0.12189 3.55185 2.88142 17 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 18 3.15264 2.63580 3.19832 0.16869 18 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 19 3.15264 2.63580 3.19832 0.16869 19 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 20 2.99096 3.65126 0.11044 3.56262 20 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 21 0.13385 3.44324 2.84268 3.35093 21 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 22 2.99096 3.65126 0.11044 3.56262 22 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 23 2.99096 3.65126 0.11044 3.56262 23 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 24 3.15264 2.63580 3.19832 0.16869 24 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 25 3.15264 2.63580 3.19832 0.16869 25 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 26 3.50552 0.12189 3.55185 2.88142 26 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 27 0.13385 3.44324 2.84268 3.35093 27 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 28 3.15264 2.63580 3.19832 0.16869 28 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 29 0.13385 3.44324 2.84268 3.35093 29 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 30 3.15264 2.63580 3.19832 0.16869 30 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 31 2.99096 3.65126 0.11044 3.56262 31 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 32 2.99096 3.65126 0.11044 3.56262 32 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 33 3.15264 2.63580 3.19832 0.16869 33 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 34 3.15264 2.63580 3.19832 0.16869 34 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 35 2.99096 3.65126 0.11044 3.56262 35 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 36 0.13385 3.44324 2.84268 3.35093 36 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 37 2.99096 3.65126 0.11044 3.56262 37 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 38 3.15264 2.63580 3.19832 0.16869 38 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 39 2.99096 3.65126 0.11044 3.56262 39 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 40 3.50552 0.12189 3.55185 2.88142 40 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 41 3.15264 2.63580 3.19832 0.16869 41 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 42 0.13385 3.44324 2.84268 3.35093 42 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 43 3.15264 2.63580 3.19832 0.16869 43 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 44 0.13385 3.44324 2.84268 3.35093 44 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 45 0.13385 3.44324 2.84268 3.35093 45 - - 1.38629 1.38629 1.38629 1.38629 0.01793 4.03001 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:36 2012 NSEQ 6 EFFN 3.506836 CKSUM 1997454489 STATS LOCAL MSV -7.2053 0.71932 STATS LOCAL VITERBI -7.6533 0.71932 STATS LOCAL FORWARD -4.0088 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81914 1.45131 1.19033 1.20581 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 0.00000 * 1 2.98701 3.64546 0.11104 3.55619 1 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 2 3.49888 0.12263 3.54550 2.87663 2 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 3 3.49888 0.12263 3.54550 2.87663 3 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 4 0.13457 3.43745 2.83894 3.34459 4 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 5 3.49888 0.12263 3.54550 2.87663 5 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 6 3.14671 2.63204 3.19263 0.16959 6 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 7 0.13457 3.43745 2.83894 3.34459 7 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 8 2.98701 3.64546 0.11104 3.55619 8 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 9 2.98701 3.64546 0.11104 3.55619 9 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 10 2.43781 0.94522 2.50951 0.81476 10 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 11 3.14671 2.63204 3.19263 0.16959 11 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 12 3.14671 2.63204 3.19263 0.16959 12 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 13 2.98701 3.64546 0.11104 3.55619 13 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 14 2.53262 0.59011 2.60406 1.22993 14 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 15 3.14671 2.63204 3.19263 0.16959 15 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 16 3.49888 0.12263 3.54550 2.87663 16 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 17 3.49888 0.12263 3.54550 2.87663 17 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 18 3.14671 2.63204 3.19263 0.16959 18 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 19 0.13457 3.43745 2.83894 3.34459 19 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 20 3.14671 2.63204 3.19263 0.16959 20 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 21 3.14671 2.63204 3.19263 0.16959 21 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 22 2.98701 3.64546 0.11104 3.55619 22 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 23 2.98701 3.64546 0.11104 3.55619 23 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 24 3.49888 0.12263 3.54550 2.87663 24 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 25 0.13457 3.43745 2.83894 3.34459 25 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 26 3.49888 0.12263 3.54550 2.87663 26 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 27 2.98701 3.64546 0.11104 3.55619 27 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 28 3.14671 2.63204 3.19263 0.16959 28 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 29 3.49888 0.12263 3.54550 2.87663 29 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 30 3.14671 2.63204 3.19263 0.16959 30 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 31 2.98701 3.64546 0.11104 3.55619 31 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 32 2.98701 3.64546 0.11104 3.55619 32 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 33 3.14671 2.63204 3.19263 0.16959 33 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 34 3.14671 2.63204 3.19263 0.16959 34 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 35 2.98701 3.64546 0.11104 3.55619 35 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 36 0.13457 3.43745 2.83894 3.34459 36 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 37 2.98701 3.64546 0.11104 3.55619 37 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 38 2.98701 3.64546 0.11104 3.55619 38 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 39 2.98701 3.64546 0.11104 3.55619 39 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 40 3.14671 2.63204 3.19263 0.16959 40 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 41 3.49888 0.12263 3.54550 2.87663 41 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 42 2.98701 3.64546 0.11104 3.55619 42 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 43 3.14671 2.63204 3.19263 0.16959 43 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 44 0.13457 3.43745 2.83894 3.34459 44 - - 1.38629 1.38629 1.38629 1.38629 0.03567 4.04425 4.04425 1.46634 0.26236 1.09861 0.40547 45 3.14671 2.63204 3.19263 0.16959 45 - - 1.38629 1.38629 1.38629 1.38629 0.01800 4.02657 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:10 2012 NSEQ 2 EFFN 2.000000 CKSUM 2976878512 STATS LOCAL MSV -7.5610 0.72760 STATS LOCAL VITERBI -8.2006 0.72760 STATS LOCAL FORWARD -3.4835 0.72760 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74298 1.29095 1.16722 1.43229 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:30:35 2012 NSEQ 9 EFFN 3.291504 CKSUM 2632514188 STATS LOCAL MSV -8.0045 0.71932 STATS LOCAL VITERBI -7.8075 0.71932 STATS LOCAL FORWARD -3.8898 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.95617 1.19844 1.04918 1.57643 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 0.00000 * 1 2.94052 3.57756 0.11828 3.48118 1 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 2 3.42154 0.13160 3.47149 2.82057 2 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 3 2.94052 3.57756 0.11828 3.48118 3 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 4 2.94052 3.57756 0.11828 3.48118 4 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 5 3.42154 0.13160 3.47149 2.82057 5 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 6 3.42154 0.13160 3.47149 2.82057 6 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 7 0.14323 3.37023 2.79540 3.27094 7 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 8 3.07849 2.58870 3.12703 0.18032 8 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 9 0.14323 3.37023 2.79540 3.27094 9 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 10 2.94052 3.57756 0.11828 3.48118 10 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 11 2.94052 3.57756 0.11828 3.48118 11 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 12 3.42154 0.13160 3.47149 2.82057 12 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 13 3.07849 2.58870 3.12703 0.18032 13 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 14 3.07849 2.58870 3.12703 0.18032 14 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 15 2.94052 3.57756 0.11828 3.48118 15 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 16 3.42154 0.13160 3.47149 2.82057 16 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 17 3.42154 0.13160 3.47149 2.82057 17 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 18 3.07849 2.58870 3.12703 0.18032 18 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 19 0.37118 2.79453 1.71935 2.66280 19 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 20 3.07849 2.58870 3.12703 0.18032 20 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 21 2.94052 3.57756 0.11828 3.48118 21 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 22 2.94052 3.57756 0.11828 3.48118 22 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 23 3.42154 0.13160 3.47149 2.82057 23 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 24 3.42154 0.13160 3.47149 2.82057 24 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 25 0.14323 3.37023 2.79540 3.27094 25 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 26 3.42154 0.13160 3.47149 2.82057 26 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 27 2.94052 3.57756 0.11828 3.48118 27 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 28 3.07849 2.58870 3.12703 0.18032 28 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 29 3.42154 0.13160 3.47149 2.82057 29 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 30 3.07849 2.58870 3.12703 0.18032 30 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 31 2.94052 3.57756 0.11828 3.48118 31 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 32 2.94052 3.57756 0.11828 3.48118 32 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 33 3.42154 0.13160 3.47149 2.82057 33 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 34 3.42154 0.13160 3.47149 2.82057 34 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 35 2.94052 3.57756 0.11828 3.48118 35 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 36 0.14323 3.37023 2.79540 3.27094 36 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 37 2.94052 3.57756 0.11828 3.48118 37 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 38 2.29538 1.79342 0.45179 2.33929 38 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 39 2.94052 3.57756 0.11828 3.48118 39 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 40 3.07849 2.58870 3.12703 0.18032 40 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 41 3.42154 0.13160 3.47149 2.82057 41 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 42 2.94052 3.57756 0.11828 3.48118 42 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 43 2.94052 3.57756 0.11828 3.48118 43 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 44 3.42154 0.13160 3.47149 2.82057 44 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 45 3.07849 2.58870 3.12703 0.18032 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98741 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_oneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:30:43 2012 NSEQ 4 EFFN 3.074219 CKSUM 2141832487 STATS LOCAL MSV -8.0288 0.71933 STATS LOCAL VITERBI -7.6965 0.71933 STATS LOCAL FORWARD -3.8244 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04658 1.16114 0.99931 1.66304 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 0.00000 * 1 2.88875 3.50292 0.12688 3.39898 1 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 2 3.33731 0.14224 3.39072 2.75871 2 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 3 2.88875 3.50292 0.12688 3.39898 3 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 4 2.88875 3.50292 0.12688 3.39898 4 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 5 3.33731 0.14224 3.39072 2.75871 5 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 6 3.33731 0.14224 3.39072 2.75871 6 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 7 2.88875 3.50292 0.12688 3.39898 7 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 8 3.00564 2.54221 3.05693 0.19265 8 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 9 0.15336 3.29732 2.74769 3.19126 9 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 10 2.88875 3.50292 0.12688 3.39898 10 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 11 2.88875 3.50292 0.12688 3.39898 11 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 12 3.33731 0.14224 3.39072 2.75871 12 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 13 3.00564 2.54221 3.05693 0.19265 13 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 14 3.00564 2.54221 3.05693 0.19265 14 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 15 2.88875 3.50292 0.12688 3.39898 15 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 16 3.33731 0.14224 3.39072 2.75871 16 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 17 3.33731 0.14224 3.39072 2.75871 17 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 18 3.00564 2.54221 3.05693 0.19265 18 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 19 0.15336 3.29732 2.74769 3.19126 19 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 20 3.33731 0.14224 3.39072 2.75871 20 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 21 2.88875 3.50292 0.12688 3.39898 21 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 22 2.88875 3.50292 0.12688 3.39898 22 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 23 3.33731 0.14224 3.39072 2.75871 23 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 24 3.33731 0.14224 3.39072 2.75871 24 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 25 0.15336 3.29732 2.74769 3.19126 25 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 26 3.33731 0.14224 3.39072 2.75871 26 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 27 2.88875 3.50292 0.12688 3.39898 27 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 28 3.00564 2.54221 3.05693 0.19265 28 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 29 3.33731 0.14224 3.39072 2.75871 29 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 30 3.00564 2.54221 3.05693 0.19265 30 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 31 2.88875 3.50292 0.12688 3.39898 31 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 32 2.88875 3.50292 0.12688 3.39898 32 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 33 3.33731 0.14224 3.39072 2.75871 33 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 34 3.33731 0.14224 3.39072 2.75871 34 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 35 2.88875 3.50292 0.12688 3.39898 35 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 36 0.15336 3.29732 2.74769 3.19126 36 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 37 2.88875 3.50292 0.12688 3.39898 37 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 38 2.88875 3.50292 0.12688 3.39898 38 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 39 2.88875 3.50292 0.12688 3.39898 39 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 40 3.00564 2.54221 3.05693 0.19265 40 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 41 3.33731 0.14224 3.39072 2.75871 41 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 42 2.88875 3.50292 0.12688 3.39898 42 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 43 2.88875 3.50292 0.12688 3.39898 43 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 44 3.33731 0.14224 3.39072 2.75871 44 - - 1.38629 1.38629 1.38629 1.38629 0.03866 3.96542 3.96542 1.46634 0.26236 1.09861 0.40547 45 3.00564 2.54221 3.05693 0.19265 45 - - 1.38629 1.38629 1.38629 1.38629 0.01952 3.94627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:30:49 2012 NSEQ 20 EFFN 3.178711 CKSUM 1515020791 STATS LOCAL MSV -7.9446 0.71931 STATS LOCAL VITERBI -7.7967 0.71931 STATS LOCAL FORWARD -4.1571 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92667 1.26232 1.04143 1.52134 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 * 1 2.91430 3.53962 0.12257 3.43936 1 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 2 3.37862 0.13690 3.43035 2.78916 2 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 3 2.91430 3.53962 0.12257 3.43936 3 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 4 2.91430 3.53962 0.12257 3.43936 4 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 5 3.37862 0.13690 3.43035 2.78916 5 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 6 3.04119 2.56493 3.09115 0.18651 6 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 7 0.14829 3.33304 2.77114 3.23028 7 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 8 3.37862 0.13690 3.43035 2.78916 8 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 9 2.91430 3.53962 0.12257 3.43936 9 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 10 2.91430 3.53962 0.12257 3.43936 10 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 11 2.91430 3.53962 0.12257 3.43936 11 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 12 0.14829 3.33304 2.77114 3.23028 12 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 13 3.04119 2.56493 3.09115 0.18651 13 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 14 0.14829 3.33304 2.77114 3.23028 14 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 15 3.04119 2.56493 3.09115 0.18651 15 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 16 3.37862 0.13690 3.43035 2.78916 16 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 17 3.37862 0.13690 3.43035 2.78916 17 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 18 3.04119 2.56493 3.09115 0.18651 18 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 19 2.91430 3.53962 0.12257 3.43936 19 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 20 3.04119 2.56493 3.09115 0.18651 20 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 21 2.91430 3.53962 0.12257 3.43936 21 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 22 2.91430 3.53962 0.12257 3.43936 22 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 23 3.37862 0.13690 3.43035 2.78916 23 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 24 3.37862 0.13690 3.43035 2.78916 24 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 25 0.14829 3.33304 2.77114 3.23028 25 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 26 3.37862 0.13690 3.43035 2.78916 26 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 27 2.91430 3.53962 0.12257 3.43936 27 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 28 2.71071 1.85835 2.77216 0.33540 28 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 29 3.37862 0.13690 3.43035 2.78916 29 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 30 3.04119 2.56493 3.09115 0.18651 30 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 31 2.91430 3.53962 0.12257 3.43936 31 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 32 3.04119 2.56493 3.09115 0.18651 32 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 33 3.37862 0.13690 3.43035 2.78916 33 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 34 3.37862 0.13690 3.43035 2.78916 34 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 35 2.91430 3.53962 0.12257 3.43936 35 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 36 0.14829 3.33304 2.77114 3.23028 36 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 37 2.91430 3.53962 0.12257 3.43936 37 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 38 2.91430 3.53962 0.12257 3.43936 38 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 39 2.91430 3.53962 0.12257 3.43936 39 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 40 3.04119 2.56493 3.09115 0.18651 40 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 41 3.37862 0.13690 3.43035 2.78916 41 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 42 2.91430 3.53962 0.12257 3.43936 42 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 43 2.91430 3.53962 0.12257 3.43936 43 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 44 3.37862 0.13690 3.43035 2.78916 44 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 45 3.04119 2.56493 3.09115 0.18651 45 - - 1.38629 1.38629 1.38629 1.38629 0.01913 3.96627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_oned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:30:56 2012 NSEQ 9 EFFN 3.212402 CKSUM 274027828 STATS LOCAL MSV -8.1725 0.71931 STATS LOCAL VITERBI -7.7872 0.71931 STATS LOCAL FORWARD -3.7945 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.07732 1.14229 0.94269 1.79536 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 0.00000 * 1 2.92227 3.55113 0.12125 3.45204 1 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 2 3.39162 0.13527 3.44282 2.79869 2 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 3 2.92227 3.55113 0.12125 3.45204 3 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 4 2.92227 3.55113 0.12125 3.45204 4 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 5 3.39162 0.13527 3.44282 2.79869 5 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 6 3.39162 0.13527 3.44282 2.79869 6 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 7 2.92227 3.55113 0.12125 3.45204 7 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 8 3.39162 0.13527 3.44282 2.79869 8 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 9 2.92227 3.55113 0.12125 3.45204 9 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 10 2.92227 3.55113 0.12125 3.45204 10 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 11 2.92227 3.55113 0.12125 3.45204 11 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 12 0.36910 2.78519 1.73448 2.65307 12 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 13 3.05245 2.57211 3.10198 0.18462 13 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 14 0.14674 3.34430 2.77850 3.24258 14 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 15 3.05245 2.57211 3.10198 0.18462 15 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 16 3.39162 0.13527 3.44282 2.79869 16 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 17 3.39162 0.13527 3.44282 2.79869 17 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 18 3.39162 0.13527 3.44282 2.79869 18 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 19 2.92227 3.55113 0.12125 3.45204 19 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 20 3.05245 2.57211 3.10198 0.18462 20 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 21 2.92227 3.55113 0.12125 3.45204 21 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 22 2.92227 3.55113 0.12125 3.45204 22 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 23 3.39162 0.13527 3.44282 2.79869 23 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 24 3.39162 0.13527 3.44282 2.79869 24 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 25 0.14674 3.34430 2.77850 3.24258 25 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 26 3.39162 0.13527 3.44282 2.79869 26 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 27 2.92227 3.55113 0.12125 3.45204 27 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 28 2.39765 1.07670 2.46934 0.72627 28 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 29 3.39162 0.13527 3.44282 2.79869 29 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 30 3.05245 2.57211 3.10198 0.18462 30 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 31 2.92227 3.55113 0.12125 3.45204 31 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 32 2.92227 3.55113 0.12125 3.45204 32 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 33 3.39162 0.13527 3.44282 2.79869 33 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 34 3.39162 0.13527 3.44282 2.79869 34 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 35 2.92227 3.55113 0.12125 3.45204 35 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 36 0.14674 3.34430 2.77850 3.24258 36 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 37 2.92227 3.55113 0.12125 3.45204 37 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 38 2.92227 3.55113 0.12125 3.45204 38 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 39 2.92227 3.55113 0.12125 3.45204 39 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 40 3.05245 2.57211 3.10198 0.18462 40 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 41 3.39162 0.13527 3.44282 2.79869 41 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 42 2.92227 3.55113 0.12125 3.45204 42 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 43 2.92227 3.55113 0.12125 3.45204 43 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 44 3.39162 0.13527 3.44282 2.79869 44 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99128 3.99128 1.46634 0.26236 1.09861 0.40547 45 3.05245 2.57211 3.10198 0.18462 45 - - 1.38629 1.38629 1.38629 1.38629 0.01900 3.97263 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:04 2012 NSEQ 22 EFFN 3.391846 CKSUM 2940126106 STATS LOCAL MSV -7.2020 0.71933 STATS LOCAL VITERBI -7.7925 0.71933 STATS LOCAL FORWARD -4.0922 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.06447 1.20648 1.02736 1.53286 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 0.00000 * 1 2.96274 3.60992 0.11476 3.51690 1 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 2 3.45832 0.12724 3.50670 2.84731 2 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 3 2.96274 3.60992 0.11476 3.51690 3 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 4 2.96274 3.60992 0.11476 3.51690 4 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 5 3.45832 0.12724 3.50670 2.84731 5 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 6 3.07353 0.22642 3.13365 2.18210 6 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 7 0.13904 3.40215 2.81612 3.30590 7 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 8 2.78093 1.89402 2.84051 0.31587 8 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 9 2.96274 3.60992 0.11476 3.51690 9 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 10 2.96274 3.60992 0.11476 3.51690 10 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 11 2.96274 3.60992 0.11476 3.51690 11 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 12 3.11076 2.60922 3.15807 0.17515 12 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 13 3.11076 2.60922 3.15807 0.17515 13 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 14 1.58973 2.23205 2.37090 0.51867 14 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 15 0.36529 2.81953 1.72361 2.68896 15 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 16 3.45832 0.12724 3.50670 2.84731 16 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 17 3.45832 0.12724 3.50670 2.84731 17 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 18 3.11076 2.60922 3.15807 0.17515 18 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 19 2.96274 3.60992 0.11476 3.51690 19 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 20 3.11076 2.60922 3.15807 0.17515 20 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 21 2.96274 3.60992 0.11476 3.51690 21 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 22 2.96274 3.60992 0.11476 3.51690 22 - - 1.38629 1.38629 1.38629 1.38629 0.12907 4.02389 2.27105 1.46634 0.26236 1.09861 0.40547 23 3.27131 0.15130 3.32731 2.70960 23 - - 1.38629 1.38629 1.38629 1.38629 0.03989 3.93471 3.93471 1.46634 0.26236 0.29755 1.35725 24 3.45832 0.12724 3.50670 2.84731 24 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 25 0.13904 3.40215 2.81612 3.30590 25 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 26 3.45832 0.12724 3.50670 2.84731 26 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 27 2.96274 3.60992 0.11476 3.51690 27 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 28 3.45832 0.12724 3.50670 2.84731 28 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 29 3.45832 0.12724 3.50670 2.84731 29 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 30 3.11076 2.60922 3.15807 0.17515 30 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 31 2.96274 3.60992 0.11476 3.51690 31 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 32 3.11076 2.60922 3.15807 0.17515 32 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 33 3.45832 0.12724 3.50670 2.84731 33 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 34 3.45832 0.12724 3.50670 2.84731 34 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 35 2.96274 3.60992 0.11476 3.51690 35 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 36 0.13904 3.40215 2.81612 3.30590 36 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 37 2.96274 3.60992 0.11476 3.51690 37 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 38 2.96274 3.60992 0.11476 3.51690 38 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 39 2.96274 3.60992 0.11476 3.51690 39 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 40 3.11076 2.60922 3.15807 0.17515 40 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 41 3.45832 0.12724 3.50670 2.84731 41 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 42 2.96274 3.60992 0.11476 3.51690 42 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 43 2.96274 3.60992 0.11476 3.51690 43 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 44 3.45832 0.12724 3.50670 2.84731 44 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02389 4.02389 1.46634 0.26236 1.09861 0.40547 45 3.11076 2.60922 3.15807 0.17515 45 - - 1.38629 1.38629 1.38629 1.38629 0.01838 4.00585 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:11 2012 NSEQ 12 EFFN 3.336914 CKSUM 485870885 STATS LOCAL MSV -8.2262 0.71933 STATS LOCAL VITERBI -7.7462 0.71933 STATS LOCAL FORWARD -4.1365 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.15126 1.17982 0.99685 1.57365 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 0.00000 * 1 2.95070 3.59237 0.11666 3.49752 1 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 2 3.43835 0.12958 3.48758 2.83281 2 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 3 2.95070 3.59237 0.11666 3.49752 3 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 4 2.95070 3.59237 0.11666 3.49752 4 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 5 3.43835 0.12958 3.48758 2.83281 5 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 6 3.43835 0.12958 3.48758 2.83281 6 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 7 0.14130 3.38481 2.80488 3.28690 7 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 8 3.43835 0.12958 3.48758 2.83281 8 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 9 2.95070 3.59237 0.11666 3.49752 9 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 10 2.95070 3.59237 0.11666 3.49752 10 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 11 2.95070 3.59237 0.11666 3.49752 11 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 12 3.09320 2.59806 3.14118 0.17794 12 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 13 1.88666 0.40908 2.54597 2.24656 13 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 14 1.88666 0.40908 2.54597 2.24656 14 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 15 2.95070 3.59237 0.11666 3.49752 15 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 16 3.43835 0.12958 3.48758 2.83281 16 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 17 3.43835 0.12958 3.48758 2.83281 17 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 18 3.43835 0.12958 3.48758 2.83281 18 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 19 2.95070 3.59237 0.11666 3.49752 19 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 20 3.09320 2.59806 3.14118 0.17794 20 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 21 2.95070 3.59237 0.11666 3.49752 21 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 22 2.95070 3.59237 0.11666 3.49752 22 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 23 3.43835 0.12958 3.48758 2.83281 23 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 24 3.09320 2.59806 3.14118 0.17794 24 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 25 0.14130 3.38481 2.80488 3.28690 25 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 26 3.43835 0.12958 3.48758 2.83281 26 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 27 2.00701 3.04952 0.26854 2.92367 27 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 28 3.09320 2.59806 3.14118 0.17794 28 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 29 3.43835 0.12958 3.48758 2.83281 29 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 30 3.09320 2.59806 3.14118 0.17794 30 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 31 2.95070 3.59237 0.11666 3.49752 31 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 32 3.09320 2.59806 3.14118 0.17794 32 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 33 3.43835 0.12958 3.48758 2.83281 33 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 34 3.43835 0.12958 3.48758 2.83281 34 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 35 2.95070 3.59237 0.11666 3.49752 35 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 36 0.14130 3.38481 2.80488 3.28690 36 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 37 2.95070 3.59237 0.11666 3.49752 37 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 38 2.95070 3.59237 0.11666 3.49752 38 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 39 2.95070 3.59237 0.11666 3.49752 39 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 40 3.09320 2.59806 3.14118 0.17794 40 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 41 3.43835 0.12958 3.48758 2.83281 41 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 42 2.95070 3.59237 0.11666 3.49752 42 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 43 2.95070 3.59237 0.11666 3.49752 43 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 44 3.09320 2.59806 3.14118 0.17794 44 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 45 3.09320 2.59806 3.14118 0.17794 45 - - 1.38629 1.38629 1.38629 1.38629 0.01856 3.99580 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_oneg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:17 2012 NSEQ 2 EFFN 2.000000 CKSUM 2296771254 STATS LOCAL MSV -7.5226 0.72702 STATS LOCAL VITERBI -8.3896 0.72702 STATS LOCAL FORWARD -3.3649 0.72702 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92402 1.20053 1.03636 1.61847 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_oneh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:22 2012 NSEQ 25 EFFN 3.195190 CKSUM 3061172173 STATS LOCAL MSV -8.2269 0.71932 STATS LOCAL VITERBI -7.7433 0.71932 STATS LOCAL FORWARD -4.0483 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82111 1.32343 1.14287 1.37424 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 0.00000 * 1 2.91821 3.54527 0.12192 3.44558 1 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 2 3.38500 0.13610 3.43647 2.79384 2 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 3 2.91821 3.54527 0.12192 3.44558 3 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 4 2.91821 3.54527 0.12192 3.44558 4 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 5 3.38500 0.13610 3.43647 2.79384 5 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 6 3.04671 2.56845 3.09646 0.18558 6 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 7 0.14753 3.33857 2.77475 3.23631 7 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 8 0.14753 3.33857 2.77475 3.23631 8 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 9 2.91821 3.54527 0.12192 3.44558 9 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 10 2.91821 3.54527 0.12192 3.44558 10 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 11 2.91821 3.54527 0.12192 3.44558 11 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 12 3.38500 0.13610 3.43647 2.79384 12 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 13 3.04671 2.56845 3.09646 0.18558 13 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 14 3.04671 2.56845 3.09646 0.18558 14 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 15 2.91821 3.54527 0.12192 3.44558 15 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 16 3.38500 0.13610 3.43647 2.79384 16 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 17 3.04671 2.56845 3.09646 0.18558 17 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 18 3.38500 0.13610 3.43647 2.79384 18 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 19 3.04671 2.56845 3.09646 0.18558 19 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 20 3.04671 2.56845 3.09646 0.18558 20 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 21 0.14753 3.33857 2.77475 3.23631 21 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 22 2.91821 3.54527 0.12192 3.44558 22 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 23 3.38500 0.13610 3.43647 2.79384 23 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 24 3.38500 0.13610 3.43647 2.79384 24 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 25 0.14753 3.33857 2.77475 3.23631 25 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 26 3.38500 0.13610 3.43647 2.79384 26 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 27 2.91821 3.54527 0.12192 3.44558 27 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 28 3.04671 2.56845 3.09646 0.18558 28 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 29 3.04671 2.56845 3.09646 0.18558 29 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 30 3.38500 0.13610 3.43647 2.79384 30 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 31 2.91821 3.54527 0.12192 3.44558 31 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 32 0.14753 3.33857 2.77475 3.23631 32 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 33 3.04671 2.56845 3.09646 0.18558 33 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 34 3.38500 0.13610 3.43647 2.79384 34 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 35 2.91821 3.54527 0.12192 3.44558 35 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 36 0.14753 3.33857 2.77475 3.23631 36 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 37 2.91821 3.54527 0.12192 3.44558 37 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 38 3.04671 2.56845 3.09646 0.18558 38 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 39 2.91821 3.54527 0.12192 3.44558 39 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 40 3.04671 2.56845 3.09646 0.18558 40 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 41 3.38500 0.13610 3.43647 2.79384 41 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 42 2.91821 3.54527 0.12192 3.44558 42 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 43 2.91821 3.54527 0.12192 3.44558 43 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 44 3.38500 0.13610 3.43647 2.79384 44 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98809 3.98809 1.46634 0.26236 1.09861 0.40547 45 3.04671 2.56845 3.09646 0.18558 45 - - 1.38629 1.38629 1.38629 1.38629 0.01907 3.96938 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:28 2012 NSEQ 4 EFFN 3.246094 CKSUM 767341417 STATS LOCAL MSV -8.0857 0.71932 STATS LOCAL VITERBI -7.7356 0.71932 STATS LOCAL FORWARD -4.4479 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.19748 1.31361 1.14567 1.19714 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 * 1 2.93012 3.56249 0.11996 3.46456 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 2 3.40447 0.13368 3.45513 2.80810 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 3 2.93012 3.56249 0.11996 3.46456 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 4 2.93012 3.56249 0.11996 3.46456 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 5 3.40447 0.13368 3.45513 2.80810 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 6 3.06361 2.57923 3.11272 0.18276 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 7 3.06361 2.57923 3.11272 0.18276 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 8 3.06361 2.57923 3.11272 0.18276 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 9 2.93012 3.56249 0.11996 3.46456 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 10 2.93012 3.56249 0.11996 3.46456 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 11 2.93012 3.56249 0.11996 3.46456 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 12 3.40447 0.13368 3.45513 2.80810 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 13 3.06361 2.57923 3.11272 0.18276 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 14 3.06361 2.57923 3.11272 0.18276 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 15 2.93012 3.56249 0.11996 3.46456 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 16 3.40447 0.13368 3.45513 2.80810 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 17 3.40447 0.13368 3.45513 2.80810 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 18 3.40447 0.13368 3.45513 2.80810 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 19 3.06361 2.57923 3.11272 0.18276 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 20 3.06361 2.57923 3.11272 0.18276 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 21 0.14522 3.35543 2.78576 3.25475 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 22 2.93012 3.56249 0.11996 3.46456 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 23 3.40447 0.13368 3.45513 2.80810 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 24 3.40447 0.13368 3.45513 2.80810 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 25 3.06361 2.57923 3.11272 0.18276 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 26 3.40447 0.13368 3.45513 2.80810 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 27 2.93012 3.56249 0.11996 3.46456 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 28 3.06361 2.57923 3.11272 0.18276 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 29 3.06361 2.57923 3.11272 0.18276 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 30 3.06361 2.57923 3.11272 0.18276 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 31 2.93012 3.56249 0.11996 3.46456 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 32 0.14522 3.35543 2.78576 3.25475 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 33 3.06361 2.57923 3.11272 0.18276 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 34 3.40447 0.13368 3.45513 2.80810 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 35 2.93012 3.56249 0.11996 3.46456 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 36 0.14522 3.35543 2.78576 3.25475 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 37 2.93012 3.56249 0.11996 3.46456 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 38 3.06361 2.57923 3.11272 0.18276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 39 2.93012 3.56249 0.11996 3.46456 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 40 3.06361 2.57923 3.11272 0.18276 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 41 3.40447 0.13368 3.45513 2.80810 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 42 2.93012 3.56249 0.11996 3.46456 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 43 2.93012 3.56249 0.11996 3.46456 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 44 3.40447 0.13368 3.45513 2.80810 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 45 3.06361 2.57923 3.11272 0.18276 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97895 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:34 2012 NSEQ 23 EFFN 3.270874 CKSUM 1661500112 STATS LOCAL MSV -8.0611 0.71932 STATS LOCAL VITERBI -7.7573 0.71932 STATS LOCAL FORWARD -4.3597 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05613 1.31125 1.14336 1.25941 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 0.00000 * 1 2.93582 3.57075 0.11904 3.47366 1 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 2 3.41382 0.13253 3.46409 2.81493 2 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 3 2.93582 3.57075 0.11904 3.47366 3 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 4 2.93582 3.57075 0.11904 3.47366 4 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 5 3.41382 0.13253 3.46409 2.81493 5 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 6 3.07175 2.58441 3.12055 0.18142 6 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 7 3.07175 2.58441 3.12055 0.18142 7 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 8 3.07175 2.58441 3.12055 0.18142 8 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 9 2.93582 3.57075 0.11904 3.47366 9 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 10 2.93582 3.57075 0.11904 3.47366 10 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 11 2.93582 3.57075 0.11904 3.47366 11 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 12 3.41382 0.13253 3.46409 2.81493 12 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 13 3.07175 2.58441 3.12055 0.18142 13 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 14 3.07175 2.58441 3.12055 0.18142 14 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 15 2.93582 3.57075 0.11904 3.47366 15 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 16 3.41382 0.13253 3.46409 2.81493 16 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 17 3.41382 0.13253 3.46409 2.81493 17 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 18 3.41382 0.13253 3.46409 2.81493 18 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 19 3.07175 2.58441 3.12055 0.18142 19 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 20 3.07175 2.58441 3.12055 0.18142 20 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 21 0.14412 3.36353 2.79104 3.26362 21 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 22 2.93582 3.57075 0.11904 3.47366 22 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 23 3.41382 0.13253 3.46409 2.81493 23 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 24 3.41382 0.13253 3.46409 2.81493 24 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 25 0.14412 3.36353 2.79104 3.26362 25 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 26 3.41382 0.13253 3.46409 2.81493 26 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 27 2.93582 3.57075 0.11904 3.47366 27 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 28 3.07175 2.58441 3.12055 0.18142 28 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 29 3.07175 2.58441 3.12055 0.18142 29 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 30 2.77009 1.93037 2.82972 0.31031 30 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 31 2.93582 3.57075 0.11904 3.47366 31 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 32 0.14412 3.36353 2.79104 3.26362 32 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 33 3.07175 2.58441 3.12055 0.18142 33 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 34 3.41382 0.13253 3.46409 2.81493 34 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 35 2.93582 3.57075 0.11904 3.47366 35 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 36 0.14412 3.36353 2.79104 3.26362 36 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 37 2.93582 3.57075 0.11904 3.47366 37 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 38 3.07175 2.58441 3.12055 0.18142 38 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 39 2.93582 3.57075 0.11904 3.47366 39 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 40 3.07175 2.58441 3.12055 0.18142 40 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 41 3.41382 0.13253 3.46409 2.81493 41 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 42 2.93582 3.57075 0.11904 3.47366 42 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 43 2.93582 3.57075 0.11904 3.47366 43 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 44 3.41382 0.13253 3.46409 2.81493 44 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00202 4.00202 1.46634 0.26236 1.09861 0.40547 45 3.07175 2.58441 3.12055 0.18142 45 - - 1.38629 1.38629 1.38629 1.38629 0.01879 3.98358 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_onek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:31:54 2012 NSEQ 3 EFFN 3.000000 CKSUM 427469681 STATS LOCAL MSV -8.0634 0.72029 STATS LOCAL VITERBI -7.6566 0.72029 STATS LOCAL FORWARD -4.3376 0.72029 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80677 1.45356 1.14412 1.26027 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 0.15719 3.27118 2.73043 3.16274 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 3.30705 0.14631 3.36166 2.73626 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_sevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:04 2012 NSEQ 18 EFFN 3.563965 CKSUM 1492424210 STATS LOCAL MSV -7.2875 0.71932 STATS LOCAL VITERBI -7.5847 0.71932 STATS LOCAL FORWARD -3.8412 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.77673 1.34258 1.12915 1.40108 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 0.00000 * 1 2.99862 3.66252 0.10930 3.57508 1 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 2 3.51842 0.12048 3.56419 2.89070 2 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 3 2.45587 0.80883 2.52786 0.94417 3 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 4 0.13247 3.45449 2.84993 3.36328 4 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 5 3.16417 2.64312 3.20941 0.16696 5 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 6 3.51842 0.12048 3.56419 2.89070 6 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 7 2.99862 3.66252 0.10930 3.57508 7 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 8 2.99862 3.66252 0.10930 3.57508 8 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 9 2.99862 3.66252 0.10930 3.57508 9 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 10 3.16417 2.64312 3.20941 0.16696 10 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 11 3.16417 2.64312 3.20941 0.16696 11 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 12 3.51842 0.12048 3.56419 2.89070 12 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 13 0.13247 3.45449 2.84993 3.36328 13 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 14 3.16417 2.64312 3.20941 0.16696 14 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 15 3.16417 2.64312 3.20941 0.16696 15 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 16 3.51842 0.12048 3.56419 2.89070 16 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 17 3.51842 0.12048 3.56419 2.89070 17 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 18 3.51842 0.12048 3.56419 2.89070 18 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 19 2.99862 3.66252 0.10930 3.57508 19 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 20 1.09883 1.59068 2.07002 1.08836 20 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 21 3.16417 2.64312 3.20941 0.16696 21 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 22 2.99862 3.66252 0.10930 3.57508 22 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 23 2.99862 3.66252 0.10930 3.57508 23 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 24 3.51842 0.12048 3.56419 2.89070 24 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 25 0.13247 3.45449 2.84993 3.36328 25 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 26 3.51842 0.12048 3.56419 2.89070 26 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 27 2.99862 3.66252 0.10930 3.57508 27 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 28 3.16417 2.64312 3.20941 0.16696 28 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 29 3.51842 0.12048 3.56419 2.89070 29 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 30 3.16417 2.64312 3.20941 0.16696 30 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 31 2.99862 3.66252 0.10930 3.57508 31 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 32 2.99862 3.66252 0.10930 3.57508 32 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 33 3.51842 0.12048 3.56419 2.89070 33 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 34 3.16417 2.64312 3.20941 0.16696 34 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 35 2.99862 3.66252 0.10930 3.57508 35 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 36 0.13247 3.45449 2.84993 3.36328 36 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 37 2.99862 3.66252 0.10930 3.57508 37 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 38 2.99862 3.66252 0.10930 3.57508 38 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 39 2.99862 3.66252 0.10930 3.57508 39 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 40 3.16417 2.64312 3.20941 0.16696 40 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 41 3.51842 0.12048 3.56419 2.89070 41 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 42 2.99862 3.66252 0.10930 3.57508 42 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 43 0.13247 3.45449 2.84993 3.36328 43 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 44 0.13247 3.45449 2.84993 3.36328 44 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 45 1.79664 2.31697 2.50966 0.42422 45 - - 1.38629 1.38629 1.38629 1.38629 0.01781 4.03671 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_sevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:10 2012 NSEQ 7 EFFN 3.496582 CKSUM 1558608 STATS LOCAL MSV -7.3590 0.71933 STATS LOCAL VITERBI -7.7029 0.71933 STATS LOCAL FORWARD -4.0423 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58896 1.55480 1.18718 1.27457 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 0.00000 * 1 0.13496 3.43436 2.83695 3.34119 1 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 2 3.49533 0.12303 3.54211 2.87408 2 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 3 3.49533 0.12303 3.54211 2.87408 3 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 4 0.13496 3.43436 2.83695 3.34119 4 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 5 3.14355 2.63004 3.18959 0.17007 5 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 6 2.60202 0.50178 2.67248 1.38094 6 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 7 2.98489 3.64235 0.11136 3.55276 7 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 8 2.98489 3.64235 0.11136 3.55276 8 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 9 2.98489 3.64235 0.11136 3.55276 9 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 10 3.14355 2.63004 3.18959 0.17007 10 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 11 3.14355 2.63004 3.18959 0.17007 11 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 12 2.98489 3.64235 0.11136 3.55276 12 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 13 0.13496 3.43436 2.83695 3.34119 13 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 14 3.14355 2.63004 3.18959 0.17007 14 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 15 3.14355 2.63004 3.18959 0.17007 15 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 16 3.49533 0.12303 3.54211 2.87408 16 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 17 3.49533 0.12303 3.54211 2.87408 17 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 18 3.49533 0.12303 3.54211 2.87408 18 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 19 2.98489 3.64235 0.11136 3.55276 19 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 20 0.13496 3.43436 2.83695 3.34119 20 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 21 3.14355 2.63004 3.18959 0.17007 21 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 22 2.98489 3.64235 0.11136 3.55276 22 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 23 2.98489 3.64235 0.11136 3.55276 23 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 24 3.14355 2.63004 3.18959 0.17007 24 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 25 0.13496 3.43436 2.83695 3.34119 25 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 26 3.49533 0.12303 3.54211 2.87408 26 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 27 2.98489 3.64235 0.11136 3.55276 27 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 28 3.14355 2.63004 3.18959 0.17007 28 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 29 3.49533 0.12303 3.54211 2.87408 29 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 30 3.14355 2.63004 3.18959 0.17007 30 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 31 2.98489 3.64235 0.11136 3.55276 31 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 32 2.98489 3.64235 0.11136 3.55276 32 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 33 3.14355 2.63004 3.18959 0.17007 33 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 34 3.14355 2.63004 3.18959 0.17007 34 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 35 2.98489 3.64235 0.11136 3.55276 35 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 36 0.13496 3.43436 2.83695 3.34119 36 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 37 2.98489 3.64235 0.11136 3.55276 37 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 38 2.98489 3.64235 0.11136 3.55276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 39 2.98489 3.64235 0.11136 3.55276 39 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 40 3.14355 2.63004 3.18959 0.17007 40 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 41 3.49533 0.12303 3.54211 2.87408 41 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 42 0.13496 3.43436 2.83695 3.34119 42 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 43 0.13496 3.43436 2.83695 3.34119 43 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 44 3.14355 2.63004 3.18959 0.17007 44 - - 1.38629 1.38629 1.38629 1.38629 0.03574 4.04245 4.04245 1.46634 0.26236 1.09861 0.40547 45 0.84492 2.19039 2.18152 1.06229 45 - - 1.38629 1.38629 1.38629 1.38629 0.01803 4.02474 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_seventeena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:53 2012 NSEQ 5 EFFN 3.149414 CKSUM 613401642 STATS LOCAL MSV -8.0549 0.71933 STATS LOCAL VITERBI -7.6860 0.71933 STATS LOCAL FORWARD -4.2074 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82217 1.20881 1.14629 1.50525 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 0.00000 * 1 2.90726 3.52948 0.12374 3.42820 1 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 2 3.03132 2.55863 3.08165 0.18819 2 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 3 3.36719 0.13835 3.41939 2.78075 3 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 4 3.36719 0.13835 3.41939 2.78075 4 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 5 0.14968 3.32315 2.76467 3.21947 5 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 6 3.03132 2.55863 3.08165 0.18819 6 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 7 2.90726 3.52948 0.12374 3.42820 7 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 8 2.90726 3.52948 0.12374 3.42820 8 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 9 0.14968 3.32315 2.76467 3.21947 9 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 10 3.03132 2.55863 3.08165 0.18819 10 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 11 3.03132 2.55863 3.08165 0.18819 11 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 12 3.36719 0.13835 3.41939 2.78075 12 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 13 3.36719 0.13835 3.41939 2.78075 13 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 14 2.90726 3.52948 0.12374 3.42820 14 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 15 3.03132 2.55863 3.08165 0.18819 15 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 16 3.03132 2.55863 3.08165 0.18819 16 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 17 3.36719 0.13835 3.41939 2.78075 17 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 18 3.36719 0.13835 3.41939 2.78075 18 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 19 3.36719 0.13835 3.41939 2.78075 19 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 20 2.90726 3.52948 0.12374 3.42820 20 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 21 2.90726 3.52948 0.12374 3.42820 21 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 22 0.14968 3.32315 2.76467 3.21947 22 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 23 3.36719 0.13835 3.41939 2.78075 23 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 24 3.36719 0.13835 3.41939 2.78075 24 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 25 0.14968 3.32315 2.76467 3.21947 25 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 26 3.36719 0.13835 3.41939 2.78075 26 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 27 2.90726 3.52948 0.12374 3.42820 27 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 28 3.36719 0.13835 3.41939 2.78075 28 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 29 3.36719 0.13835 3.41939 2.78075 29 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 30 3.03132 2.55863 3.08165 0.18819 30 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 31 2.90726 3.52948 0.12374 3.42820 31 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 32 2.90726 3.52948 0.12374 3.42820 32 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 33 3.36719 0.13835 3.41939 2.78075 33 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 34 3.03132 2.55863 3.08165 0.18819 34 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 35 2.90726 3.52948 0.12374 3.42820 35 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 36 0.14968 3.32315 2.76467 3.21947 36 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 37 2.90726 3.52948 0.12374 3.42820 37 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 38 2.90726 3.52948 0.12374 3.42820 38 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 39 2.90726 3.52948 0.12374 3.42820 39 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 40 3.03132 2.55863 3.08165 0.18819 40 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 41 3.36719 0.13835 3.41939 2.78075 41 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 42 2.90726 3.52948 0.12374 3.42820 42 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 43 2.90726 3.52948 0.12374 3.42820 43 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 44 3.03132 2.55863 3.08165 0.18819 44 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 45 0.14968 3.32315 2.76467 3.21947 45 - - 1.38629 1.38629 1.38629 1.38629 0.01923 3.96070 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_seventeenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:39:00 2012 NSEQ 5 EFFN 3.159180 CKSUM 1305453752 STATS LOCAL MSV -8.1369 0.71931 STATS LOCAL VITERBI -7.7407 0.71931 STATS LOCAL FORWARD -4.3131 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05240 1.20627 1.09569 1.43569 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 0.00000 * 1 2.90962 3.53288 0.12335 3.43193 1 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 2 3.03462 2.56074 3.08483 0.18763 2 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 3 3.37101 0.13787 3.42306 2.78357 3 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 4 3.37101 0.13787 3.42306 2.78357 4 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 5 0.14921 3.32646 2.76683 3.22308 5 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 6 3.03462 2.56074 3.08483 0.18763 6 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 7 2.90962 3.53288 0.12335 3.43193 7 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 8 2.90962 3.53288 0.12335 3.43193 8 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 9 0.14921 3.32646 2.76683 3.22308 9 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 10 3.03462 2.56074 3.08483 0.18763 10 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 11 3.03462 2.56074 3.08483 0.18763 11 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 12 3.37101 0.13787 3.42306 2.78357 12 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 13 3.37101 0.13787 3.42306 2.78357 13 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 14 2.90962 3.53288 0.12335 3.43193 14 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 15 3.03462 2.56074 3.08483 0.18763 15 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 16 3.03462 2.56074 3.08483 0.18763 16 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 17 3.37101 0.13787 3.42306 2.78357 17 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 18 3.37101 0.13787 3.42306 2.78357 18 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 19 3.37101 0.13787 3.42306 2.78357 19 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 20 2.90962 3.53288 0.12335 3.43193 20 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 21 2.90962 3.53288 0.12335 3.43193 21 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 22 2.90962 3.53288 0.12335 3.43193 22 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 23 3.37101 0.13787 3.42306 2.78357 23 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 24 3.37101 0.13787 3.42306 2.78357 24 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 25 0.14921 3.32646 2.76683 3.22308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 26 3.37101 0.13787 3.42306 2.78357 26 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 27 2.90962 3.53288 0.12335 3.43193 27 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 28 3.03462 2.56074 3.08483 0.18763 28 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 29 3.37101 0.13787 3.42306 2.78357 29 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 30 3.03462 2.56074 3.08483 0.18763 30 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 31 2.90962 3.53288 0.12335 3.43193 31 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 32 2.90962 3.53288 0.12335 3.43193 32 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 33 3.37101 0.13787 3.42306 2.78357 33 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 34 3.03462 2.56074 3.08483 0.18763 34 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 35 2.90962 3.53288 0.12335 3.43193 35 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 36 0.14921 3.32646 2.76683 3.22308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 37 2.90962 3.53288 0.12335 3.43193 37 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 38 2.90962 3.53288 0.12335 3.43193 38 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 39 2.90962 3.53288 0.12335 3.43193 39 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 40 3.03462 2.56074 3.08483 0.18763 40 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 41 3.37101 0.13787 3.42306 2.78357 41 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 42 2.90962 3.53288 0.12335 3.43193 42 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 43 2.90962 3.53288 0.12335 3.43193 43 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 44 3.37101 0.13787 3.42306 2.78357 44 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98140 3.98140 1.46634 0.26236 1.09861 0.40547 45 3.03462 2.56074 3.08483 0.18763 45 - - 1.38629 1.38629 1.38629 1.38629 0.01920 3.96256 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_seventeenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:39:08 2012 NSEQ 4 EFFN 3.292969 CKSUM 3685436907 STATS LOCAL MSV -7.9887 0.71931 STATS LOCAL VITERBI -7.7418 0.71931 STATS LOCAL FORWARD -3.9482 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80736 1.13130 1.19594 1.55647 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 0.00000 * 1 2.94085 3.57805 0.11823 3.48171 1 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 2 3.07897 2.58901 3.12749 0.18024 2 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 3 3.42209 0.13153 3.47201 2.82097 3 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 4 3.42209 0.13153 3.47201 2.82097 4 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 5 3.07897 2.58901 3.12749 0.18024 5 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 6 3.07897 2.58901 3.12749 0.18024 6 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 7 2.94085 3.57805 0.11823 3.48171 7 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 8 2.94085 3.57805 0.11823 3.48171 8 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 9 0.14316 3.37070 2.79571 3.27146 9 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 10 3.07897 2.58901 3.12749 0.18024 10 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 11 3.07897 2.58901 3.12749 0.18024 11 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 12 3.42209 0.13153 3.47201 2.82097 12 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 13 3.42209 0.13153 3.47201 2.82097 13 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 14 0.14316 3.37070 2.79571 3.27146 14 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 15 0.14316 3.37070 2.79571 3.27146 15 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 16 3.07897 2.58901 3.12749 0.18024 16 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 17 3.42209 0.13153 3.47201 2.82097 17 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 18 3.42209 0.13153 3.47201 2.82097 18 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 19 3.42209 0.13153 3.47201 2.82097 19 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 20 2.94085 3.57805 0.11823 3.48171 20 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 21 2.94085 3.57805 0.11823 3.48171 21 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 22 0.14316 3.37070 2.79571 3.27146 22 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 23 3.42209 0.13153 3.47201 2.82097 23 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 24 3.42209 0.13153 3.47201 2.82097 24 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 25 0.14316 3.37070 2.79571 3.27146 25 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 26 3.42209 0.13153 3.47201 2.82097 26 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 27 2.94085 3.57805 0.11823 3.48171 27 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 28 3.42209 0.13153 3.47201 2.82097 28 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 29 3.42209 0.13153 3.47201 2.82097 29 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 30 3.07897 2.58901 3.12749 0.18024 30 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 31 2.94085 3.57805 0.11823 3.48171 31 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 32 2.94085 3.57805 0.11823 3.48171 32 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 33 3.42209 0.13153 3.47201 2.82097 33 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 34 3.07897 2.58901 3.12749 0.18024 34 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 35 2.94085 3.57805 0.11823 3.48171 35 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 36 0.14316 3.37070 2.79571 3.27146 36 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 37 2.94085 3.57805 0.11823 3.48171 37 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 38 2.94085 3.57805 0.11823 3.48171 38 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 39 2.94085 3.57805 0.11823 3.48171 39 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 40 3.07897 2.58901 3.12749 0.18024 40 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 41 3.42209 0.13153 3.47201 2.82097 41 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 42 2.94085 3.57805 0.11823 3.48171 42 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 43 2.94085 3.57805 0.11823 3.48171 43 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 44 3.42209 0.13153 3.47201 2.82097 44 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 45 1.43147 1.00912 2.06421 1.31088 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98768 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_seventeend_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:39:13 2012 NSEQ 23 EFFN 3.220337 CKSUM 3706857204 STATS LOCAL MSV -8.1343 0.71932 STATS LOCAL VITERBI -7.5910 0.71932 STATS LOCAL FORWARD -4.0166 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93028 1.09417 1.09232 1.68936 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 0.00000 * 1 2.92413 3.55382 0.12094 3.45500 1 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 2 3.39466 0.13489 3.44573 2.80092 2 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 3 3.39466 0.13489 3.44573 2.80092 3 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 4 3.39466 0.13489 3.44573 2.80092 4 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 5 0.14638 3.34693 2.78022 3.24546 5 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 6 3.39466 0.13489 3.44573 2.80092 6 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 7 2.92413 3.55382 0.12094 3.45500 7 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 8 2.92413 3.55382 0.12094 3.45500 8 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 9 0.14638 3.34693 2.78022 3.24546 9 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 10 3.05509 2.57380 3.10452 0.18418 10 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 11 3.05509 2.57380 3.10452 0.18418 11 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 12 3.39466 0.13489 3.44573 2.80092 12 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 13 3.05509 2.57380 3.10452 0.18418 13 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 14 2.92413 3.55382 0.12094 3.45500 14 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 15 2.43346 1.22010 2.50389 0.62493 15 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 16 3.05509 2.57380 3.10452 0.18418 16 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 17 3.39466 0.13489 3.44573 2.80092 17 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 18 3.39466 0.13489 3.44573 2.80092 18 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 19 3.39466 0.13489 3.44573 2.80092 19 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 20 2.92413 3.55382 0.12094 3.45500 20 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 21 2.92413 3.55382 0.12094 3.45500 21 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 22 2.92413 3.55382 0.12094 3.45500 22 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 23 3.04500 0.22727 3.10593 2.19896 23 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 24 3.05509 2.57380 3.10452 0.18418 24 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 25 0.14638 3.34693 2.78022 3.24546 25 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 26 3.39466 0.13489 3.44573 2.80092 26 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 27 2.92413 3.55382 0.12094 3.45500 27 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 28 3.39466 0.13489 3.44573 2.80092 28 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 29 3.39466 0.13489 3.44573 2.80092 29 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 30 3.05509 2.57380 3.10452 0.18418 30 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 31 2.92413 3.55382 0.12094 3.45500 31 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 32 2.92413 3.55382 0.12094 3.45500 32 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 33 3.39466 0.13489 3.44573 2.80092 33 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 34 3.05509 2.57380 3.10452 0.18418 34 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 35 2.92413 3.55382 0.12094 3.45500 35 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 36 0.14638 3.34693 2.78022 3.24546 36 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 37 2.92413 3.55382 0.12094 3.45500 37 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 38 2.92413 3.55382 0.12094 3.45500 38 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 39 2.92413 3.55382 0.12094 3.45500 39 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 40 3.39466 0.13489 3.44573 2.80092 40 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 41 3.39466 0.13489 3.44573 2.80092 41 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 42 2.92413 3.55382 0.12094 3.45500 42 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 43 2.92413 3.55382 0.12094 3.45500 43 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 44 3.39466 0.13489 3.44573 2.80092 44 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99274 3.99274 1.46634 0.26236 1.09861 0.40547 45 0.14638 3.34693 2.78022 3.24546 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97412 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:34:38 2012 NSEQ 7 EFFN 4.125488 CKSUM 1937543874 STATS LOCAL MSV -6.8330 0.71932 STATS LOCAL VITERBI -7.8147 0.71932 STATS LOCAL FORWARD -4.0567 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.67777 1.45561 1.28397 1.19397 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 0.00000 * 1 2.18378 0.82140 1.13155 2.07917 1 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 2 3.09938 3.81164 0.09533 3.74056 2 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 3 3.69079 0.10326 3.72867 3.01331 3 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 4 0.11535 3.60610 2.94734 3.52987 4 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 5 3.32274 2.74372 3.36174 0.14509 5 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 6 3.32274 2.74372 3.36174 0.14509 6 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 7 3.09938 3.81164 0.09533 3.74056 7 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 8 1.53355 2.90664 0.40474 2.77383 8 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 9 3.09938 3.81164 0.09533 3.74056 9 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 10 3.09938 3.81164 0.09533 3.74056 10 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 11 3.32274 2.74372 3.36174 0.14509 11 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 12 3.69079 0.10326 3.72867 3.01331 12 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 13 0.11535 3.60610 2.94734 3.52987 13 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 14 0.11535 3.60610 2.94734 3.52987 14 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 15 0.11535 3.60610 2.94734 3.52987 15 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 16 3.69079 0.10326 3.72867 3.01331 16 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 17 2.72481 0.47283 2.79340 1.38632 17 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 18 3.69079 0.10326 3.72867 3.01331 18 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 19 3.32274 2.74372 3.36174 0.14509 19 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 20 3.32274 2.74372 3.36174 0.14509 20 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 21 3.32274 2.74372 3.36174 0.14509 21 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 22 3.09938 3.81164 0.09533 3.74056 22 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 23 2.18378 0.82140 1.13155 2.07917 23 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 24 1.32958 1.10724 2.12400 1.25389 24 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 25 0.11535 3.60610 2.94734 3.52987 25 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 26 3.69079 0.10326 3.72867 3.01331 26 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 27 3.09938 3.81164 0.09533 3.74056 27 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 28 3.32274 2.74372 3.36174 0.14509 28 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 29 3.69079 0.10326 3.72867 3.01331 29 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 30 3.32274 2.74372 3.36174 0.14509 30 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 31 3.09938 3.81164 0.09533 3.74056 31 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 32 3.09938 3.81164 0.09533 3.74056 32 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 33 3.32274 2.74372 3.36174 0.14509 33 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 34 3.32274 2.74372 3.36174 0.14509 34 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 35 3.69079 0.10326 3.72867 3.01331 35 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 36 0.11535 3.60610 2.94734 3.52987 36 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 37 3.09938 3.81164 0.09533 3.74056 37 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 38 3.09938 3.81164 0.09533 3.74056 38 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 39 3.09938 3.81164 0.09533 3.74056 39 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 40 3.32274 2.74372 3.36174 0.14509 40 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 41 3.69079 0.10326 3.72867 3.01331 41 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 42 0.11535 3.60610 2.94734 3.52987 42 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 43 3.32274 2.74372 3.36174 0.14509 43 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 44 3.32274 2.74372 3.36174 0.14509 44 - - 1.38629 1.38629 1.38629 1.38629 0.03213 4.14717 4.14717 1.46634 0.26236 1.09861 0.40547 45 3.32274 2.74372 3.36174 0.14509 45 - - 1.38629 1.38629 1.38629 1.38629 0.01619 4.13124 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:42 2012 NSEQ 4 EFFN 3.863281 CKSUM 3845133886 STATS LOCAL MSV -7.4397 0.71932 STATS LOCAL VITERBI -7.7016 0.71932 STATS LOCAL FORWARD -4.3099 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45009 1.98350 1.27374 1.05532 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 0.00000 * 1 0.92184 1.01208 2.20162 2.05472 1 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 2 3.25155 2.69851 3.29336 0.15449 2 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 3 3.25155 2.69851 3.29336 0.15449 3 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 4 3.05513 3.74598 0.10122 3.66762 4 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 5 0.95536 2.21103 2.22862 0.92115 5 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 6 3.25155 2.69851 3.29336 0.15449 6 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 7 3.25155 2.69851 3.29336 0.15449 7 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 8 3.25155 2.69851 3.29336 0.15449 8 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 9 0.12263 3.53873 2.90407 3.45579 9 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 10 0.12263 3.53873 2.90407 3.45579 10 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 11 0.84088 2.60316 0.89347 2.46045 11 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 12 0.12263 3.53873 2.90407 3.45579 12 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 13 3.25155 2.69851 3.29336 0.15449 13 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 14 3.61457 0.11050 3.65599 2.95937 14 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 15 3.25155 2.69851 3.29336 0.15449 15 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 16 3.05513 3.74598 0.10122 3.66762 16 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 17 3.25155 2.69851 3.29336 0.15449 17 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 18 3.05513 3.74598 0.10122 3.66762 18 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 19 3.25155 2.69851 3.29336 0.15449 19 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 20 3.05513 3.74598 0.10122 3.66762 20 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 21 0.12263 3.53873 2.90407 3.45579 21 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 22 3.05513 3.74598 0.10122 3.66762 22 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 23 3.05513 3.74598 0.10122 3.66762 23 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 24 3.25155 2.69851 3.29336 0.15449 24 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 25 0.12263 3.53873 2.90407 3.45579 25 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 26 3.61457 0.11050 3.65599 2.95937 26 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 27 0.12263 3.53873 2.90407 3.45579 27 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 28 3.61457 0.11050 3.65599 2.95937 28 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 29 0.12263 3.53873 2.90407 3.45579 29 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 30 3.25155 2.69851 3.29336 0.15449 30 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 31 3.05513 3.74598 0.10122 3.66762 31 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 32 3.05513 3.74598 0.10122 3.66762 32 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 33 3.25155 2.69851 3.29336 0.15449 33 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 34 3.25155 2.69851 3.29336 0.15449 34 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 35 3.05513 3.74598 0.10122 3.66762 35 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 36 0.12263 3.53873 2.90407 3.45579 36 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 37 3.05513 3.74598 0.10122 3.66762 37 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 38 3.25155 2.69851 3.29336 0.15449 38 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 39 3.05513 3.74598 0.10122 3.66762 39 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 40 3.25155 2.69851 3.29336 0.15449 40 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 41 3.61457 0.11050 3.65599 2.95937 41 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 42 3.05513 3.74598 0.10122 3.66762 42 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 43 3.25155 2.69851 3.29336 0.15449 43 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 44 3.25155 2.69851 3.29336 0.15449 44 - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10484 4.10484 1.46634 0.26236 1.09861 0.40547 45 0.12263 3.53873 2.90407 3.45579 45 - - 1.38629 1.38629 1.38629 1.38629 0.01691 4.08821 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:44 2012 NSEQ 4 EFFN 3.347656 CKSUM 1138680412 STATS LOCAL MSV -8.0225 0.71931 STATS LOCAL VITERBI -7.7367 0.71931 STATS LOCAL FORWARD -4.2215 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54341 1.78944 1.25102 1.09936 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 0.00000 * 1 0.14085 3.38823 2.80709 3.29064 1 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 2 3.44228 0.12912 3.49135 2.83567 2 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 3 3.44228 0.12912 3.49135 2.83567 3 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 4 0.14085 3.38823 2.80709 3.29064 4 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 5 0.14085 3.38823 2.80709 3.29064 5 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 6 3.44228 0.12912 3.49135 2.83567 6 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 7 0.14085 3.38823 2.80709 3.29064 7 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 8 2.95307 3.59583 0.11628 3.50134 8 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 9 2.95307 3.59583 0.11628 3.50134 9 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 10 3.09665 2.60026 3.14450 0.17739 10 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 11 3.09665 2.60026 3.14450 0.17739 11 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 12 3.44228 0.12912 3.49135 2.83567 12 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 13 0.14085 3.38823 2.80709 3.29064 13 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 14 3.09665 2.60026 3.14450 0.17739 14 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 15 0.14085 3.38823 2.80709 3.29064 15 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 16 3.09665 2.60026 3.14450 0.17739 16 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 17 3.44228 0.12912 3.49135 2.83567 17 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 18 3.09665 2.60026 3.14450 0.17739 18 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 19 2.95307 3.59583 0.11628 3.50134 19 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 20 3.09665 2.60026 3.14450 0.17739 20 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 21 3.09665 2.60026 3.14450 0.17739 21 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 22 2.95307 3.59583 0.11628 3.50134 22 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 23 2.95307 3.59583 0.11628 3.50134 23 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 24 3.09665 2.60026 3.14450 0.17739 24 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 25 0.14085 3.38823 2.80709 3.29064 25 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 26 3.09665 2.60026 3.14450 0.17739 26 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 27 2.95307 3.59583 0.11628 3.50134 27 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 28 3.09665 2.60026 3.14450 0.17739 28 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 29 3.09665 2.60026 3.14450 0.17739 29 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 30 3.09665 2.60026 3.14450 0.17739 30 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 31 2.95307 3.59583 0.11628 3.50134 31 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 32 2.95307 3.59583 0.11628 3.50134 32 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 33 3.09665 2.60026 3.14450 0.17739 33 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 34 3.09665 2.60026 3.14450 0.17739 34 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 35 2.95307 3.59583 0.11628 3.50134 35 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 36 0.14085 3.38823 2.80709 3.29064 36 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 37 2.95307 3.59583 0.11628 3.50134 37 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 38 2.95307 3.59583 0.11628 3.50134 38 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 39 2.95307 3.59583 0.11628 3.50134 39 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 40 3.09665 2.60026 3.14450 0.17739 40 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 41 3.44228 0.12912 3.49135 2.83567 41 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 42 2.95307 3.59583 0.11628 3.50134 42 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 43 0.14085 3.38823 2.80709 3.29064 43 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 44 3.09665 2.60026 3.14450 0.17739 44 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01596 4.01596 1.46634 0.26236 1.09861 0.40547 45 3.09665 2.60026 3.14450 0.17739 45 - - 1.38629 1.38629 1.38629 1.38629 0.01853 3.99777 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:50 2012 NSEQ 15 EFFN 3.541260 CKSUM 743970875 STATS LOCAL MSV -7.2652 0.71932 STATS LOCAL VITERBI -7.7504 0.71932 STATS LOCAL FORWARD -4.0818 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47399 1.99837 1.30389 1.01071 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 0.00000 * 1 0.13330 3.44776 2.84559 3.35589 1 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 2 3.51070 0.12132 3.55681 2.88515 2 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 3 3.15726 2.63874 3.20277 0.16800 3 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 4 0.13330 3.44776 2.84559 3.35589 4 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 5 3.15726 2.63874 3.20277 0.16800 5 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 6 3.51070 0.12132 3.55681 2.88515 6 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 7 0.25186 3.06981 2.08699 2.95350 7 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 8 2.99404 3.65578 0.10998 3.56762 8 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 9 2.99404 3.65578 0.10998 3.56762 9 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 10 3.15726 2.63874 3.20277 0.16800 10 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 11 3.15726 2.63874 3.20277 0.16800 11 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 12 3.15726 2.63874 3.20277 0.16800 12 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 13 0.13330 3.44776 2.84559 3.35589 13 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 14 3.15726 2.63874 3.20277 0.16800 14 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 15 0.13330 3.44776 2.84559 3.35589 15 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 16 3.15726 2.63874 3.20277 0.16800 16 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 17 3.51070 0.12132 3.55681 2.88515 17 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 18 3.15726 2.63874 3.20277 0.16800 18 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 19 2.99404 3.65578 0.10998 3.56762 19 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 20 0.13330 3.44776 2.84559 3.35589 20 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 21 3.15726 2.63874 3.20277 0.16800 21 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 22 0.13330 3.44776 2.84559 3.35589 22 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 23 2.99404 3.65578 0.10998 3.56762 23 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 24 3.15726 2.63874 3.20277 0.16800 24 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 25 0.13330 3.44776 2.84559 3.35589 25 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 26 3.15726 2.63874 3.20277 0.16800 26 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 27 2.99404 3.65578 0.10998 3.56762 27 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 28 3.15726 2.63874 3.20277 0.16800 28 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 29 3.15726 2.63874 3.20277 0.16800 29 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 30 3.15726 2.63874 3.20277 0.16800 30 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 31 2.99404 3.65578 0.10998 3.56762 31 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 32 2.99404 3.65578 0.10998 3.56762 32 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 33 3.15726 2.63874 3.20277 0.16800 33 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 34 3.15726 2.63874 3.20277 0.16800 34 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 35 2.99404 3.65578 0.10998 3.56762 35 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 36 0.13330 3.44776 2.84559 3.35589 36 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 37 2.99404 3.65578 0.10998 3.56762 37 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 38 2.99404 3.65578 0.10998 3.56762 38 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 39 2.99404 3.65578 0.10998 3.56762 39 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 40 3.15726 2.63874 3.20277 0.16800 40 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 41 3.51070 0.12132 3.55681 2.88515 41 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 42 2.99404 3.65578 0.10998 3.56762 42 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 43 0.13330 3.44776 2.84559 3.35589 43 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 44 2.63026 1.53163 2.69540 0.43968 44 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05026 4.05026 1.46634 0.26236 1.09861 0.40547 45 3.15726 2.63874 3.20277 0.16800 45 - - 1.38629 1.38629 1.38629 1.38629 0.01789 4.03269 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:35:57 2012 NSEQ 27 EFFN 3.477173 CKSUM 145315044 STATS LOCAL MSV -7.2100 0.71931 STATS LOCAL VITERBI -7.8054 0.71931 STATS LOCAL FORWARD -4.0473 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.53836 2.01048 1.31044 0.96328 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 0.00000 * 1 0.13569 3.42847 2.83315 3.33474 1 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 2 3.48857 0.12378 3.53565 2.86920 2 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 3 3.13754 2.62622 3.18381 0.17099 3 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 4 0.13569 3.42847 2.83315 3.33474 4 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 5 2.27052 2.44039 2.75948 0.29264 5 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 6 3.48857 0.12378 3.53565 2.86920 6 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 7 0.13569 3.42847 2.83315 3.33474 7 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 8 2.98086 3.63644 0.11197 3.54622 8 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 9 2.98086 3.63644 0.11197 3.54622 9 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 10 3.13754 2.62622 3.18381 0.17099 10 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 11 3.13754 2.62622 3.18381 0.17099 11 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 12 3.13754 2.62622 3.18381 0.17099 12 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 13 0.13569 3.42847 2.83315 3.33474 13 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 14 3.13754 2.62622 3.18381 0.17099 14 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 15 0.13569 3.42847 2.83315 3.33474 15 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 16 3.13754 2.62622 3.18381 0.17099 16 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 17 3.48857 0.12378 3.53565 2.86920 17 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 18 3.13754 2.62622 3.18381 0.17099 18 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 19 2.98086 3.63644 0.11197 3.54622 19 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 20 3.13754 2.62622 3.18381 0.17099 20 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 21 3.13754 2.62622 3.18381 0.17099 21 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 22 0.13569 3.42847 2.83315 3.33474 22 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 23 2.98086 3.63644 0.11197 3.54622 23 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 24 3.13754 2.62622 3.18381 0.17099 24 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 25 0.13569 3.42847 2.83315 3.33474 25 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 26 3.13754 2.62622 3.18381 0.17099 26 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 27 2.98086 3.63644 0.11197 3.54622 27 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 28 3.13754 2.62622 3.18381 0.17099 28 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 29 3.13754 2.62622 3.18381 0.17099 29 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 30 3.13754 2.62622 3.18381 0.17099 30 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 31 2.98086 3.63644 0.11197 3.54622 31 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 32 2.98086 3.63644 0.11197 3.54622 32 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 33 3.13754 2.62622 3.18381 0.17099 33 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 34 3.13754 2.62622 3.18381 0.17099 34 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 35 2.98086 3.63644 0.11197 3.54622 35 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 36 0.13569 3.42847 2.83315 3.33474 36 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 37 2.98086 3.63644 0.11197 3.54622 37 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 38 2.98086 3.63644 0.11197 3.54622 38 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 39 2.98086 3.63644 0.11197 3.54622 39 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 40 3.13754 2.62622 3.18381 0.17099 40 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 41 3.48857 0.12378 3.53565 2.86920 41 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 42 2.98086 3.63644 0.11197 3.54622 42 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 43 0.13569 3.42847 2.83315 3.33474 43 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 44 3.13754 2.62622 3.18381 0.17099 44 - - 1.38629 1.38629 1.38629 1.38629 0.03586 4.03904 4.03904 1.46634 0.26236 1.09861 0.40547 45 3.13754 2.62622 3.18381 0.17099 45 - - 1.38629 1.38629 1.38629 1.38629 0.01809 4.02127 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tend_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:03 2012 NSEQ 4 EFFN 3.707031 CKSUM 223107628 STATS LOCAL MSV -7.3709 0.71933 STATS LOCAL VITERBI -7.6109 0.71933 STATS LOCAL FORWARD -4.0357 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32217 2.06016 1.44176 0.99561 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 0.00000 * 1 0.12754 3.49579 2.87650 3.40860 1 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 2 3.56566 0.11545 3.60931 2.92454 2 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 3 3.20678 2.67013 3.25036 0.16074 3 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 4 0.12754 3.49579 2.87650 3.40860 4 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 5 0.12754 3.49579 2.87650 3.40860 5 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 6 3.56566 0.11545 3.60931 2.92454 6 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 7 0.12754 3.49579 2.87650 3.40860 7 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 8 3.02650 3.70362 0.10523 3.62062 8 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 9 3.02650 3.70362 0.10523 3.62062 9 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 10 3.20678 2.67013 3.25036 0.16074 10 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 11 3.20678 2.67013 3.25036 0.16074 11 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 12 3.20678 2.67013 3.25036 0.16074 12 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 13 0.12754 3.49579 2.87650 3.40860 13 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 14 3.20678 2.67013 3.25036 0.16074 14 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 15 0.12754 3.49579 2.87650 3.40860 15 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 16 3.20678 2.67013 3.25036 0.16074 16 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 17 3.56566 0.11545 3.60931 2.92454 17 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 18 3.20678 2.67013 3.25036 0.16074 18 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 19 3.02650 3.70362 0.10523 3.62062 19 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 20 3.20678 2.67013 3.25036 0.16074 20 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 21 3.20678 2.67013 3.25036 0.16074 21 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 22 0.12754 3.49579 2.87650 3.40860 22 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 23 3.02650 3.70362 0.10523 3.62062 23 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 24 3.20678 2.67013 3.25036 0.16074 24 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 25 0.12754 3.49579 2.87650 3.40860 25 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 26 2.47317 0.94581 2.54437 0.80119 26 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 27 3.02650 3.70362 0.10523 3.62062 27 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 28 3.20678 2.67013 3.25036 0.16074 28 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 29 3.20678 2.67013 3.25036 0.16074 29 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 30 3.20678 2.67013 3.25036 0.16074 30 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 31 0.12754 3.49579 2.87650 3.40860 31 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 32 0.12754 3.49579 2.87650 3.40860 32 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 33 3.20678 2.67013 3.25036 0.16074 33 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 34 3.20678 2.67013 3.25036 0.16074 34 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 35 3.02650 3.70362 0.10523 3.62062 35 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 36 0.12754 3.49579 2.87650 3.40860 36 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 37 3.02650 3.70362 0.10523 3.62062 37 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 38 3.02650 3.70362 0.10523 3.62062 38 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 39 3.02650 3.70362 0.10523 3.62062 39 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 40 3.20678 2.67013 3.25036 0.16074 40 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 41 2.47317 0.94581 2.54437 0.80119 41 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 42 3.02650 3.70362 0.10523 3.62062 42 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 43 0.12754 3.49579 2.87650 3.40860 43 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 44 3.20678 2.67013 3.25036 0.16074 44 - - 1.38629 1.38629 1.38629 1.38629 0.03444 4.07873 4.07873 1.46634 0.26236 1.09861 0.40547 45 3.20678 2.67013 3.25036 0.16074 45 - - 1.38629 1.38629 1.38629 1.38629 0.01737 4.06165 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tene_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:09 2012 NSEQ 5 EFFN 3.735352 CKSUM 1997058217 STATS LOCAL MSV -7.2306 0.71932 STATS LOCAL VITERBI -7.6111 0.71932 STATS LOCAL FORWARD -4.0332 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.49987 1.83225 1.50630 0.92873 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 0.00000 * 1 0.12662 3.50373 2.88160 3.41733 1 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 2 3.57473 0.11452 3.61797 2.93101 2 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 3 3.21503 2.67536 3.25828 0.15957 3 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 4 0.61319 2.63365 1.19099 2.49325 4 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 5 0.12662 3.50373 2.88160 3.41733 5 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 6 3.57473 0.11452 3.61797 2.93101 6 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 7 0.12662 3.50373 2.88160 3.41733 7 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 8 3.03183 3.71149 0.10447 3.62935 8 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 9 3.03183 3.71149 0.10447 3.62935 9 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 10 3.21503 2.67536 3.25828 0.15957 10 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 11 3.21503 2.67536 3.25828 0.15957 11 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 12 3.21503 2.67536 3.25828 0.15957 12 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 13 2.50744 0.71426 2.57900 1.04094 13 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 14 3.21503 2.67536 3.25828 0.15957 14 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 15 0.12662 3.50373 2.88160 3.41733 15 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 16 3.21503 2.67536 3.25828 0.15957 16 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 17 3.57473 0.11452 3.61797 2.93101 17 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 18 3.21503 2.67536 3.25828 0.15957 18 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 19 3.03183 3.71149 0.10447 3.62935 19 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 20 3.21503 2.67536 3.25828 0.15957 20 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 21 3.21503 2.67536 3.25828 0.15957 21 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 22 0.12662 3.50373 2.88160 3.41733 22 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 23 3.03183 3.71149 0.10447 3.62935 23 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 24 3.21503 2.67536 3.25828 0.15957 24 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 25 0.12662 3.50373 2.88160 3.41733 25 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 26 3.21503 2.67536 3.25828 0.15957 26 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 27 3.03183 3.71149 0.10447 3.62935 27 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 28 3.21503 2.67536 3.25828 0.15957 28 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 29 3.21503 2.67536 3.25828 0.15957 29 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 30 3.57473 0.11452 3.61797 2.93101 30 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 31 0.12662 3.50373 2.88160 3.41733 31 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 32 0.12662 3.50373 2.88160 3.41733 32 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 33 3.21503 2.67536 3.25828 0.15957 33 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 34 3.21503 2.67536 3.25828 0.15957 34 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 35 3.03183 3.71149 0.10447 3.62935 35 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 36 0.12662 3.50373 2.88160 3.41733 36 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 37 3.03183 3.71149 0.10447 3.62935 37 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 38 3.03183 3.71149 0.10447 3.62935 38 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 39 3.03183 3.71149 0.10447 3.62935 39 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 40 3.21503 2.67536 3.25828 0.15957 40 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 41 3.57473 0.11452 3.61797 2.93101 41 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 42 3.21503 2.67536 3.25828 0.15957 42 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 43 3.21503 2.67536 3.25828 0.15957 43 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 44 3.21503 2.67536 3.25828 0.15957 44 - - 1.38629 1.38629 1.38629 1.38629 0.03428 4.08351 4.08351 1.46634 0.26236 1.09861 0.40547 45 3.21503 2.67536 3.25828 0.15957 45 - - 1.38629 1.38629 1.38629 1.38629 0.01729 4.06652 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_tenf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:14 2012 NSEQ 9 EFFN 3.388184 CKSUM 3584086150 STATS LOCAL MSV -7.3202 0.71932 STATS LOCAL VITERBI -7.7155 0.71932 STATS LOCAL FORWARD -3.9805 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47116 1.78523 1.37718 1.04898 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 0.00000 * 1 2.96194 3.60876 0.11489 3.51562 1 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 2 3.45700 0.12739 3.50544 2.84636 2 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 3 0.13919 3.40101 2.81538 3.30464 3 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 4 3.45700 0.12739 3.50544 2.84636 4 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 5 3.10960 2.60848 3.15695 0.17533 5 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 6 0.13919 3.40101 2.81538 3.30464 6 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 7 0.13919 3.40101 2.81538 3.30464 7 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 8 3.45700 0.12739 3.50544 2.84636 8 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 9 0.13919 3.40101 2.81538 3.30464 9 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 10 2.96194 3.60876 0.11489 3.51562 10 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 11 2.96194 3.60876 0.11489 3.51562 11 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 12 2.96194 3.60876 0.11489 3.51562 12 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 13 3.10960 2.60848 3.15695 0.17533 13 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 14 3.10960 2.60848 3.15695 0.17533 14 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 15 0.13919 3.40101 2.81538 3.30464 15 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 16 3.10960 2.60848 3.15695 0.17533 16 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 17 3.45700 0.12739 3.50544 2.84636 17 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 18 3.10960 2.60848 3.15695 0.17533 18 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 19 2.96194 3.60876 0.11489 3.51562 19 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 20 3.10960 2.60848 3.15695 0.17533 20 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 21 3.10960 2.60848 3.15695 0.17533 21 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 22 0.13919 3.40101 2.81538 3.30464 22 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 23 2.96194 3.60876 0.11489 3.51562 23 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 24 3.10960 2.60848 3.15695 0.17533 24 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 25 0.13919 3.40101 2.81538 3.30464 25 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 26 3.10960 2.60848 3.15695 0.17533 26 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 27 2.96194 3.60876 0.11489 3.51562 27 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 28 3.10960 2.60848 3.15695 0.17533 28 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 29 3.10960 2.60848 3.15695 0.17533 29 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 30 3.45700 0.12739 3.50544 2.84636 30 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 31 0.13919 3.40101 2.81538 3.30464 31 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 32 0.13919 3.40101 2.81538 3.30464 32 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 33 3.10960 2.60848 3.15695 0.17533 33 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 34 3.10960 2.60848 3.15695 0.17533 34 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 35 2.96194 3.60876 0.11489 3.51562 35 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 36 0.13919 3.40101 2.81538 3.30464 36 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 37 2.96194 3.60876 0.11489 3.51562 37 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 38 2.96194 3.60876 0.11489 3.51562 38 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 39 2.96194 3.60876 0.11489 3.51562 39 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 40 3.10960 2.60848 3.15695 0.17533 40 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 41 3.45700 0.12739 3.50544 2.84636 41 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 42 3.10960 2.60848 3.15695 0.17533 42 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 43 3.10960 2.60848 3.15695 0.17533 43 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 44 3.10960 2.60848 3.15695 0.17533 44 - - 1.38629 1.38629 1.38629 1.38629 0.03645 4.02324 4.02324 1.46634 0.26236 1.09861 0.40547 45 3.10960 2.60848 3.15695 0.17533 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00518 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_teng_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:36:22 2012 NSEQ 2 EFFN 2.000000 CKSUM 3663368387 STATS LOCAL MSV -7.3488 0.72876 STATS LOCAL VITERBI -8.2888 0.72876 STATS LOCAL FORWARD -3.6395 0.72876 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38983 1.64273 1.43124 1.14439 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.81865 0.23582 2.88868 2.35662 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirteena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:02 2012 NSEQ 3 EFFN 3.000000 CKSUM 2336979512 STATS LOCAL MSV -7.9801 0.72066 STATS LOCAL VITERBI -7.8245 0.72066 STATS LOCAL FORWARD -3.9046 0.72066 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32957 2.00957 1.24643 1.15889 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.15719 3.27118 2.73043 3.16274 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.97980 2.52563 3.03204 0.19727 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirteenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:38:12 2012 NSEQ 3 EFFN 3.000000 CKSUM 2866047971 STATS LOCAL MSV -8.0194 0.72073 STATS LOCAL VITERBI -7.8566 0.72073 STATS LOCAL FORWARD -3.9487 0.72073 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39363 2.00317 1.24770 1.10940 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.15719 3.27118 2.73043 3.16274 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.97980 2.52563 3.03204 0.19727 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:16 2012 NSEQ 7 EFFN 3.277832 CKSUM 3385757595 STATS LOCAL MSV -8.0891 0.71932 STATS LOCAL VITERBI -7.6678 0.71932 STATS LOCAL FORWARD -3.7375 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72215 1.52760 1.19403 1.19976 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 0.00000 * 1 2.93741 3.57306 0.11878 3.47620 1 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 2 2.93741 3.57306 0.11878 3.47620 2 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 3 3.41643 0.13221 3.46659 2.81684 3 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 4 3.07403 2.58586 3.12274 0.18104 4 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 5 3.07403 2.58586 3.12274 0.18104 5 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 6 3.07403 2.58586 3.12274 0.18104 6 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 7 3.41643 0.13221 3.46659 2.81684 7 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 8 2.93741 3.57306 0.11878 3.47620 8 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 9 2.93741 3.57306 0.11878 3.47620 9 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 10 2.93741 3.57306 0.11878 3.47620 10 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 11 3.07403 2.58586 3.12274 0.18104 11 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 12 3.41643 0.13221 3.46659 2.81684 12 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 13 3.07403 2.58586 3.12274 0.18104 13 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 14 3.07403 2.58586 3.12274 0.18104 14 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 15 3.07403 2.58586 3.12274 0.18104 15 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 16 3.07403 2.58586 3.12274 0.18104 16 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 17 3.41643 0.13221 3.46659 2.81684 17 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 18 3.41643 0.13221 3.46659 2.81684 18 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 19 2.93741 3.57306 0.11878 3.47620 19 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 20 0.14382 3.36580 2.79252 3.26609 20 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 21 2.93741 3.57306 0.11878 3.47620 21 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 22 2.93741 3.57306 0.11878 3.47620 22 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 23 3.07403 2.58586 3.12274 0.18104 23 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 24 3.41643 0.13221 3.46659 2.81684 24 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 25 0.14382 3.36580 2.79252 3.26609 25 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 26 3.41643 0.13221 3.46659 2.81684 26 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 27 0.14382 3.36580 2.79252 3.26609 27 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 28 3.07403 2.58586 3.12274 0.18104 28 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 29 3.41643 0.13221 3.46659 2.81684 29 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 30 3.07403 2.58586 3.12274 0.18104 30 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 31 2.93741 3.57306 0.11878 3.47620 31 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 32 3.07403 2.58586 3.12274 0.18104 32 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 33 3.41643 0.13221 3.46659 2.81684 33 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 34 3.07403 2.58586 3.12274 0.18104 34 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 35 2.93741 3.57306 0.11878 3.47620 35 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 36 0.14382 3.36580 2.79252 3.26609 36 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 37 2.93741 3.57306 0.11878 3.47620 37 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 38 0.14382 3.36580 2.79252 3.26609 38 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 39 2.93741 3.57306 0.11878 3.47620 39 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 40 3.07403 2.58586 3.12274 0.18104 40 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 41 3.07403 2.58586 3.12274 0.18104 41 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 42 2.93741 3.57306 0.11878 3.47620 42 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 43 0.14382 3.36580 2.79252 3.26609 43 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 44 2.93741 3.57306 0.11878 3.47620 44 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00329 4.00329 1.46634 0.26236 1.09861 0.40547 45 0.14382 3.36580 2.79252 3.26609 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98487 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:30 2012 NSEQ 3 EFFN 3.000000 CKSUM 3283497841 STATS LOCAL MSV -8.1429 0.72002 STATS LOCAL VITERBI -7.6801 0.72002 STATS LOCAL FORWARD -4.0384 0.72002 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72213 1.15515 1.25962 1.50263 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.30705 0.14631 3.36166 2.73626 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 0.15719 3.27118 2.73043 3.16274 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 3.30705 0.14631 3.36166 2.73626 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:02 2012 NSEQ 6 EFFN 3.606445 CKSUM 1494175732 STATS LOCAL MSV -7.4761 0.71932 STATS LOCAL VITERBI -7.7902 0.71932 STATS LOCAL FORWARD -4.1870 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.89462 1.54545 1.24685 1.05268 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 0.00000 * 1 3.00708 3.67496 0.10805 3.58886 1 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 2 3.53270 0.11893 3.57783 2.90095 2 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 3 3.00708 3.67496 0.10805 3.58886 3 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 4 3.53270 0.11893 3.57783 2.90095 4 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 5 3.17699 2.65124 3.22173 0.16506 5 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 6 3.00708 3.67496 0.10805 3.58886 6 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 7 3.17699 2.65124 3.22173 0.16506 7 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 8 3.17699 2.65124 3.22173 0.16506 8 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 9 0.13096 3.46696 2.85796 3.37696 9 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 10 3.00708 3.67496 0.10805 3.58886 10 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 11 3.00708 3.67496 0.10805 3.58886 11 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 12 0.95902 2.17958 2.19512 0.93573 12 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 13 3.17699 2.65124 3.22173 0.16506 13 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 14 3.17699 2.65124 3.22173 0.16506 14 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 15 3.17699 2.65124 3.22173 0.16506 15 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 16 3.53270 0.11893 3.57783 2.90095 16 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 17 2.55182 0.58439 2.62299 1.23090 17 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 18 3.17699 2.65124 3.22173 0.16506 18 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 19 0.13096 3.46696 2.85796 3.37696 19 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 20 3.00708 3.67496 0.10805 3.58886 20 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 21 3.53270 0.11893 3.57783 2.90095 21 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 22 0.13096 3.46696 2.85796 3.37696 22 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 23 3.00708 3.67496 0.10805 3.58886 23 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 24 3.53270 0.11893 3.57783 2.90095 24 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 25 0.13096 3.46696 2.85796 3.37696 25 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 26 3.17699 2.65124 3.22173 0.16506 26 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 27 3.00708 3.67496 0.10805 3.58886 27 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 28 3.17699 2.65124 3.22173 0.16506 28 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 29 3.53270 0.11893 3.57783 2.90095 29 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 30 3.17699 2.65124 3.22173 0.16506 30 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 31 3.00708 3.67496 0.10805 3.58886 31 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 32 3.17699 2.65124 3.22173 0.16506 32 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 33 3.53270 0.11893 3.57783 2.90095 33 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 34 3.17699 2.65124 3.22173 0.16506 34 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 35 3.00708 3.67496 0.10805 3.58886 35 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 36 0.13096 3.46696 2.85796 3.37696 36 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 37 3.00708 3.67496 0.10805 3.58886 37 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 38 3.17699 2.65124 3.22173 0.16506 38 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 39 3.00708 3.67496 0.10805 3.58886 39 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 40 3.17699 2.65124 3.22173 0.16506 40 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 41 3.53270 0.11893 3.57783 2.90095 41 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 42 3.00708 3.67496 0.10805 3.58886 42 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 43 3.17699 2.65124 3.22173 0.16506 43 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 44 3.17699 2.65124 3.22173 0.16506 44 - - 1.38629 1.38629 1.38629 1.38629 0.03505 4.06155 4.06155 1.46634 0.26236 1.09861 0.40547 45 3.17699 2.65124 3.22173 0.16506 45 - - 1.38629 1.38629 1.38629 1.38629 0.01768 4.04418 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:54 2012 NSEQ 2 EFFN 2.000000 CKSUM 1862354267 STATS LOCAL MSV -7.4990 0.72818 STATS LOCAL VITERBI -8.2013 0.72818 STATS LOCAL FORWARD -3.6550 0.72818 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82028 1.51089 1.16534 1.18585 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyninea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:41 2012 NSEQ 12 EFFN 3.436523 CKSUM 1305076398 STATS LOCAL MSV -7.4447 0.71933 STATS LOCAL VITERBI -7.6590 0.71933 STATS LOCAL FORWARD -4.0283 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.90049 1.11875 1.13599 1.59597 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 0.00000 * 1 2.97231 3.62392 0.11328 3.53237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 2 3.47427 0.12540 3.52197 2.85887 2 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 3 2.97231 3.62392 0.11328 3.53237 3 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 4 3.47427 0.12540 3.52197 2.85887 4 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 5 3.12486 2.61817 3.17162 0.17294 5 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 6 3.47427 0.12540 3.52197 2.85887 6 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 7 2.97231 3.62392 0.11328 3.53237 7 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 8 3.12486 2.61817 3.17162 0.17294 8 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 9 3.47427 0.12540 3.52197 2.85887 9 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 10 3.12486 2.61817 3.17162 0.17294 10 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 11 3.47427 0.12540 3.52197 2.85887 11 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 12 3.12486 2.61817 3.17162 0.17294 12 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 13 2.45737 1.15240 2.52778 0.65657 13 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 14 2.97231 3.62392 0.11328 3.53237 14 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 15 3.47427 0.12540 3.52197 2.85887 15 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 16 2.97231 3.62392 0.11328 3.53237 16 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 17 0.13726 3.41603 2.82510 3.32110 17 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 18 2.97231 3.62392 0.11328 3.53237 18 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 19 2.97231 3.62392 0.11328 3.53237 19 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 20 3.47427 0.12540 3.52197 2.85887 20 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 21 2.97231 3.62392 0.11328 3.53237 21 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 22 0.13726 3.41603 2.82510 3.32110 22 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 23 2.97231 3.62392 0.11328 3.53237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 24 3.47427 0.12540 3.52197 2.85887 24 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 25 0.13726 3.41603 2.82510 3.32110 25 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 26 0.13726 3.41603 2.82510 3.32110 26 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 27 2.97231 3.62392 0.11328 3.53237 27 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 28 2.97231 3.62392 0.11328 3.53237 28 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 29 3.47427 0.12540 3.52197 2.85887 29 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 30 3.12486 2.61817 3.17162 0.17294 30 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 31 2.97231 3.62392 0.11328 3.53237 31 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 32 3.12486 2.61817 3.17162 0.17294 32 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 33 3.47427 0.12540 3.52197 2.85887 33 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 34 3.47427 0.12540 3.52197 2.85887 34 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 35 2.97231 3.62392 0.11328 3.53237 35 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 36 0.13726 3.41603 2.82510 3.32110 36 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 37 2.97231 3.62392 0.11328 3.53237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 38 3.47427 0.12540 3.52197 2.85887 38 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 39 2.97231 3.62392 0.11328 3.53237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 40 3.12486 2.61817 3.17162 0.17294 40 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 41 3.47427 0.12540 3.52197 2.85887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 42 3.47427 0.12540 3.52197 2.85887 42 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 43 1.11860 0.85853 2.17412 1.99678 43 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 44 3.12486 2.61817 3.17162 0.17294 44 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 45 2.86793 0.31108 2.93325 1.84958 45 - - 1.38629 1.38629 1.38629 1.38629 0.01823 4.01395 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtynineb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:48 2012 NSEQ 4 EFFN 3.113281 CKSUM 2440900297 STATS LOCAL MSV -7.9878 0.71931 STATS LOCAL VITERBI -7.8835 0.71931 STATS LOCAL FORWARD -3.7817 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92771 1.21126 1.04606 1.58291 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 0.00000 * 1 3.35293 0.14020 3.40571 2.77025 1 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 2 2.89845 3.51682 0.12523 3.41426 2 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 3 3.35293 0.14020 3.40571 2.77025 3 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 4 3.01905 2.55078 3.06983 0.19031 4 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 5 3.35293 0.14020 3.40571 2.77025 5 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 6 2.89845 3.51682 0.12523 3.41426 6 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 7 3.01905 2.55078 3.06983 0.19031 7 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 8 3.35293 0.14020 3.40571 2.77025 8 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 9 2.89845 3.51682 0.12523 3.41426 9 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 10 3.35293 0.14020 3.40571 2.77025 10 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 11 3.01905 2.55078 3.06983 0.19031 11 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 12 3.01905 2.55078 3.06983 0.19031 12 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 13 3.35293 0.14020 3.40571 2.77025 13 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 14 2.89845 3.51682 0.12523 3.41426 14 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 15 0.15142 3.31082 2.75657 3.20600 15 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 16 2.89845 3.51682 0.12523 3.41426 16 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 17 3.35293 0.14020 3.40571 2.77025 17 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 18 2.89845 3.51682 0.12523 3.41426 18 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 19 2.89845 3.51682 0.12523 3.41426 19 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 20 3.35293 0.14020 3.40571 2.77025 20 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 21 2.89845 3.51682 0.12523 3.41426 21 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 22 0.15142 3.31082 2.75657 3.20600 22 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 23 2.89845 3.51682 0.12523 3.41426 23 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 24 3.35293 0.14020 3.40571 2.77025 24 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 25 0.15142 3.31082 2.75657 3.20600 25 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 26 3.01905 2.55078 3.06983 0.19031 26 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 27 2.89845 3.51682 0.12523 3.41426 27 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 28 2.89845 3.51682 0.12523 3.41426 28 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 29 3.35293 0.14020 3.40571 2.77025 29 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 30 3.35293 0.14020 3.40571 2.77025 30 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 31 2.89845 3.51682 0.12523 3.41426 31 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 32 2.89845 3.51682 0.12523 3.41426 32 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 33 3.01905 2.55078 3.06983 0.19031 33 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 34 3.35293 0.14020 3.40571 2.77025 34 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 35 2.89845 3.51682 0.12523 3.41426 35 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 36 0.15142 3.31082 2.75657 3.20600 36 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 37 2.89845 3.51682 0.12523 3.41426 37 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 38 0.15142 3.31082 2.75657 3.20600 38 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 39 2.89845 3.51682 0.12523 3.41426 39 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 40 3.01905 2.55078 3.06983 0.19031 40 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 41 3.35293 0.14020 3.40571 2.77025 41 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 42 3.35293 0.14020 3.40571 2.77025 42 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 43 2.89845 3.51682 0.12523 3.41426 43 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 44 3.01905 2.55078 3.06983 0.19031 44 - - 1.38629 1.38629 1.38629 1.38629 0.03837 3.97279 3.97279 1.46634 0.26236 1.09861 0.40547 45 3.01905 2.55078 3.06983 0.19031 45 - - 1.38629 1.38629 1.38629 1.38629 0.01937 3.95379 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:29 2012 NSEQ 30 EFFN 3.629150 CKSUM 1546314626 STATS LOCAL MSV -7.4451 0.71931 STATS LOCAL VITERBI -7.9191 0.71931 STATS LOCAL FORWARD -4.0575 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.27612 1.35205 1.13329 1.15000 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 0.00000 * 1 3.01153 3.68153 0.10740 3.59614 1 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 2 3.54024 0.11813 3.58504 2.90636 2 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 3 3.01153 3.68153 0.10740 3.59614 3 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 4 3.54024 0.11813 3.58504 2.90636 4 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 5 3.54024 0.11813 3.58504 2.90636 5 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 6 3.01153 3.68153 0.10740 3.59614 6 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 7 3.18379 2.65555 3.22826 0.16407 7 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 8 3.18379 2.65555 3.22826 0.16407 8 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 9 3.01153 3.68153 0.10740 3.59614 9 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 10 3.01153 3.68153 0.10740 3.59614 10 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 11 3.01153 3.68153 0.10740 3.59614 11 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 12 3.18379 2.65555 3.22826 0.16407 12 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 13 3.18379 2.65555 3.22826 0.16407 13 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 14 3.18379 2.65555 3.22826 0.16407 14 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 15 2.99319 2.20646 3.04534 0.23294 15 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 16 3.54024 0.11813 3.58504 2.90636 16 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 17 3.54024 0.11813 3.58504 2.90636 17 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 18 3.54024 0.11813 3.58504 2.90636 18 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 19 3.18379 2.65555 3.22826 0.16407 19 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 20 3.18379 2.65555 3.22826 0.16407 20 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 21 3.54024 0.11813 3.58504 2.90636 21 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 22 3.01153 3.68153 0.10740 3.59614 22 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 23 3.01153 3.68153 0.10740 3.59614 23 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 24 3.54024 0.11813 3.58504 2.90636 24 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 25 0.13017 3.47355 2.86220 3.38419 25 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 26 3.54024 0.11813 3.58504 2.90636 26 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 27 3.01153 3.68153 0.10740 3.59614 27 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 28 3.18379 2.65555 3.22826 0.16407 28 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 29 3.54024 0.11813 3.58504 2.90636 29 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 30 3.18379 2.65555 3.22826 0.16407 30 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 31 3.01153 3.68153 0.10740 3.59614 31 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 32 3.01153 3.68153 0.10740 3.59614 32 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 33 2.65178 1.53552 2.71648 0.43383 33 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 34 3.18379 2.65555 3.22826 0.16407 34 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 35 3.54024 0.11813 3.58504 2.90636 35 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 36 0.13017 3.47355 2.86220 3.38419 36 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 37 3.01153 3.68153 0.10740 3.59614 37 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 38 3.01153 3.68153 0.10740 3.59614 38 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 39 3.01153 3.68153 0.10740 3.59614 39 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 40 3.18379 2.65555 3.22826 0.16407 40 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 41 3.18379 2.65555 3.22826 0.16407 41 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 42 3.01153 3.68153 0.10740 3.59614 42 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 43 3.18379 2.65555 3.22826 0.16407 43 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 44 1.66647 2.28859 2.45050 0.47252 44 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06546 4.06546 1.46634 0.26236 1.09861 0.40547 45 0.77729 2.22981 2.20691 1.13084 45 - - 1.38629 1.38629 1.38629 1.38629 0.01761 4.04815 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:20 2012 NSEQ 4 EFFN 3.277344 CKSUM 3008892434 STATS LOCAL MSV -8.0837 0.71933 STATS LOCAL VITERBI -7.8221 0.71933 STATS LOCAL FORWARD -4.2716 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47281 1.61226 1.25134 1.25470 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 0.00000 * 1 3.41625 0.13224 3.46642 2.81671 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 2 3.07387 2.58576 3.12259 0.18107 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 3 3.07387 2.58576 3.12259 0.18107 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 4 3.07387 2.58576 3.12259 0.18107 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 5 2.93730 3.57289 0.11880 3.47603 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 6 2.93730 3.57289 0.11880 3.47603 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 7 3.07387 2.58576 3.12259 0.18107 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 8 3.07387 2.58576 3.12259 0.18107 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 9 0.14384 3.36564 2.79241 3.26592 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 10 2.93730 3.57289 0.11880 3.47603 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 11 3.41625 0.13224 3.46642 2.81671 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 12 0.14384 3.36564 2.79241 3.26592 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 13 0.14384 3.36564 2.79241 3.26592 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 14 3.07387 2.58576 3.12259 0.18107 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 15 0.14384 3.36564 2.79241 3.26592 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 16 0.14384 3.36564 2.79241 3.26592 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 17 3.41625 0.13224 3.46642 2.81671 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 18 3.07387 2.58576 3.12259 0.18107 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 19 0.14384 3.36564 2.79241 3.26592 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 20 2.93730 3.57289 0.11880 3.47603 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 21 0.14384 3.36564 2.79241 3.26592 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 22 2.93730 3.57289 0.11880 3.47603 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 23 3.41625 0.13224 3.46642 2.81671 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 24 3.41625 0.13224 3.46642 2.81671 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 25 3.07387 2.58576 3.12259 0.18107 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 26 3.07387 2.58576 3.12259 0.18107 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 27 2.93730 3.57289 0.11880 3.47603 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 28 3.41625 0.13224 3.46642 2.81671 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 29 3.41625 0.13224 3.46642 2.81671 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 30 3.07387 2.58576 3.12259 0.18107 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 31 2.93730 3.57289 0.11880 3.47603 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 32 3.07387 2.58576 3.12259 0.18107 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 33 0.14384 3.36564 2.79241 3.26592 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 34 3.07387 2.58576 3.12259 0.18107 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 35 2.93730 3.57289 0.11880 3.47603 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 36 0.14384 3.36564 2.79241 3.26592 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 37 2.93730 3.57289 0.11880 3.47603 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 38 2.93730 3.57289 0.11880 3.47603 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 39 2.93730 3.57289 0.11880 3.47603 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 40 3.07387 2.58576 3.12259 0.18107 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 41 3.41625 0.13224 3.46642 2.81671 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 42 2.93730 3.57289 0.11880 3.47603 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 43 2.93730 3.57289 0.11880 3.47603 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 44 0.14384 3.36564 2.79241 3.26592 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 45 3.07387 2.58576 3.12259 0.18107 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98478 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:44:13 2012 NSEQ 4 EFFN 3.386719 CKSUM 43523732 STATS LOCAL MSV -7.1538 0.71932 STATS LOCAL VITERBI -7.5801 0.71932 STATS LOCAL FORWARD -4.0824 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46898 1.58365 1.24528 1.28462 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 * 1 2.96162 3.60830 0.11494 3.51511 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 2 2.96162 3.60830 0.11494 3.51511 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 3 3.45647 0.12746 3.50493 2.84597 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 4 0.13925 3.40055 2.81508 3.30414 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 5 3.45647 0.12746 3.50493 2.84597 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 6 3.45647 0.12746 3.50493 2.84597 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 7 3.10913 2.60819 3.15650 0.17540 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 8 0.13925 3.40055 2.81508 3.30414 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 9 3.10913 2.60819 3.15650 0.17540 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 10 2.96162 3.60830 0.11494 3.51511 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 11 0.13925 3.40055 2.81508 3.30414 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 12 3.10913 2.60819 3.15650 0.17540 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 13 0.13925 3.40055 2.81508 3.30414 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 14 0.13925 3.40055 2.81508 3.30414 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 15 3.45647 0.12746 3.50493 2.84597 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 16 3.45647 0.12746 3.50493 2.84597 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 17 3.10913 2.60819 3.15650 0.17540 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 18 3.45647 0.12746 3.50493 2.84597 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 19 0.13925 3.40055 2.81508 3.30414 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 20 3.10913 2.60819 3.15650 0.17540 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 21 2.96162 3.60830 0.11494 3.51511 21 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 22 2.96162 3.60830 0.11494 3.51511 22 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 23 2.96162 3.60830 0.11494 3.51511 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 24 3.10913 2.60819 3.15650 0.17540 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 25 0.13925 3.40055 2.81508 3.30414 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 26 3.10913 2.60819 3.15650 0.17540 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 27 2.96162 3.60830 0.11494 3.51511 27 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 28 3.10913 2.60819 3.15650 0.17540 28 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 29 3.45647 0.12746 3.50493 2.84597 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 30 3.10913 2.60819 3.15650 0.17540 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 31 2.96162 3.60830 0.11494 3.51511 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 32 2.96162 3.60830 0.11494 3.51511 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 33 2.41679 0.95546 2.48875 0.81386 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 34 3.10913 2.60819 3.15650 0.17540 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 35 2.96162 3.60830 0.11494 3.51511 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 36 0.13925 3.40055 2.81508 3.30414 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 37 2.96162 3.60830 0.11494 3.51511 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 38 2.96162 3.60830 0.11494 3.51511 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 39 2.96162 3.60830 0.11494 3.51511 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 40 3.10913 2.60819 3.15650 0.17540 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 41 3.45647 0.12746 3.50493 2.84597 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 42 3.10913 2.60819 3.15650 0.17540 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 43 0.13925 3.40055 2.81508 3.30414 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 44 0.13925 3.40055 2.81508 3.30414 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 45 3.10913 2.60819 3.15650 0.17540 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00492 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:45 2012 NSEQ 2 EFFN 2.000000 CKSUM 4245904999 STATS LOCAL MSV -7.5548 0.72784 STATS LOCAL VITERBI -8.4188 0.72784 STATS LOCAL FORWARD -3.0671 0.72784 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73881 1.39367 1.16744 1.32824 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.53331 3.02441 0.20344 2.88069 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:38 2012 NSEQ 10 EFFN 3.803711 CKSUM 2157164048 STATS LOCAL MSV -6.7794 0.71932 STATS LOCAL VITERBI -7.8237 0.71932 STATS LOCAL FORWARD -3.9341 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.09383 1.36487 1.18062 1.15746 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 0.00000 * 1 3.04443 3.73013 0.10270 3.65003 1 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 2 3.59624 0.11233 3.63850 2.94634 2 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 3 3.59624 0.11233 3.63850 2.94634 3 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 4 3.04443 3.73013 0.10270 3.65003 4 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 5 3.23469 2.68782 3.27717 0.15681 5 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 6 3.23469 2.68782 3.27717 0.15681 6 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 7 3.04443 3.73013 0.10270 3.65003 7 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 8 3.04443 3.73013 0.10270 3.65003 8 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 9 3.04443 3.73013 0.10270 3.65003 9 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 10 0.31629 2.96999 1.82122 2.84699 10 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 11 2.64834 1.45078 2.71369 0.46434 11 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 12 3.23469 2.68782 3.27717 0.15681 12 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 13 0.12445 3.52261 2.89373 3.43808 13 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 14 2.48935 0.93066 2.56039 0.80863 14 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 15 3.23469 2.68782 3.27717 0.15681 15 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 16 3.59624 0.11233 3.63850 2.94634 16 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 17 3.59624 0.11233 3.63850 2.94634 17 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 18 3.59624 0.11233 3.63850 2.94634 18 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 19 3.23469 2.68782 3.27717 0.15681 19 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 20 3.23469 2.68782 3.27717 0.15681 20 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 21 3.59624 0.11233 3.63850 2.94634 21 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 22 3.04443 3.73013 0.10270 3.65003 22 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 23 3.04443 3.73013 0.10270 3.65003 23 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 24 3.59624 0.11233 3.63850 2.94634 24 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 25 0.12445 3.52261 2.89373 3.43808 25 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 26 3.59624 0.11233 3.63850 2.94634 26 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 27 3.04443 3.73013 0.10270 3.65003 27 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 28 3.23469 2.68782 3.27717 0.15681 28 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 29 3.59624 0.11233 3.63850 2.94634 29 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 30 3.23469 2.68782 3.27717 0.15681 30 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 31 3.04443 3.73013 0.10270 3.65003 31 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 32 3.04443 3.73013 0.10270 3.65003 32 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 33 2.77923 1.70594 2.84012 0.35969 33 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 34 3.23469 2.68782 3.27717 0.15681 34 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 35 3.59624 0.11233 3.63850 2.94634 35 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 36 0.12445 3.52261 2.89373 3.43808 36 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 37 3.04443 3.73013 0.10270 3.65003 37 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 38 3.04443 3.73013 0.10270 3.65003 38 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 39 3.04443 3.73013 0.10270 3.65003 39 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 40 3.23469 2.68782 3.27717 0.15681 40 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 41 3.23469 2.68782 3.27717 0.15681 41 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 42 3.04443 3.73013 0.10270 3.65003 42 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 43 2.48935 0.93066 2.56039 0.80863 43 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 44 3.23469 2.68782 3.27717 0.15681 44 - - 1.38629 1.38629 1.38629 1.38629 0.03388 4.09496 4.09496 1.46634 0.26236 1.09861 0.40547 45 3.23469 2.68782 3.27717 0.15681 45 - - 1.38629 1.38629 1.38629 1.38629 0.01708 4.07817 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:10 2012 NSEQ 12 EFFN 3.149414 CKSUM 2840327789 STATS LOCAL MSV -7.9812 0.71931 STATS LOCAL VITERBI -7.6469 0.71931 STATS LOCAL FORWARD -4.0771 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63594 1.21124 1.19814 1.58159 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 0.00000 * 1 2.90726 3.52948 0.12374 3.42820 1 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 2 3.36719 0.13835 3.41939 2.78075 2 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 3 2.90726 3.52948 0.12374 3.42820 3 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 4 2.90726 3.52948 0.12374 3.42820 4 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 5 3.03132 2.55863 3.08165 0.18819 5 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 6 0.14968 3.32315 2.76467 3.21947 6 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 7 3.03132 2.55863 3.08165 0.18819 7 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 8 3.36719 0.13835 3.41939 2.78075 8 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 9 2.90726 3.52948 0.12374 3.42820 9 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 10 2.90726 3.52948 0.12374 3.42820 10 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 11 2.90726 3.52948 0.12374 3.42820 11 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 12 3.36719 0.13835 3.41939 2.78075 12 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 13 3.36719 0.13835 3.41939 2.78075 13 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 14 3.36719 0.13835 3.41939 2.78075 14 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 15 2.90726 3.52948 0.12374 3.42820 15 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 16 3.36719 0.13835 3.41939 2.78075 16 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 17 3.03132 2.55863 3.08165 0.18819 17 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 18 3.36719 0.13835 3.41939 2.78075 18 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 19 2.90726 3.52948 0.12374 3.42820 19 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 20 0.14968 3.32315 2.76467 3.21947 20 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 21 3.03132 2.55863 3.08165 0.18819 21 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 22 0.14968 3.32315 2.76467 3.21947 22 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 23 3.36719 0.13835 3.41939 2.78075 23 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 24 3.36719 0.13835 3.41939 2.78075 24 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 25 0.14968 3.32315 2.76467 3.21947 25 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 26 3.36719 0.13835 3.41939 2.78075 26 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 27 2.90726 3.52948 0.12374 3.42820 27 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 28 3.36719 0.13835 3.41939 2.78075 28 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 29 3.36719 0.13835 3.41939 2.78075 29 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 30 3.03132 2.55863 3.08165 0.18819 30 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 31 0.14968 3.32315 2.76467 3.21947 31 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 32 3.03132 2.55863 3.08165 0.18819 32 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 33 3.36719 0.13835 3.41939 2.78075 33 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 34 3.03132 2.55863 3.08165 0.18819 34 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 35 2.90726 3.52948 0.12374 3.42820 35 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 36 0.14968 3.32315 2.76467 3.21947 36 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 37 2.90726 3.52948 0.12374 3.42820 37 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 38 2.90726 3.52948 0.12374 3.42820 38 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 39 2.90726 3.52948 0.12374 3.42820 39 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 40 3.03132 2.55863 3.08165 0.18819 40 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 41 3.36719 0.13835 3.41939 2.78075 41 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 42 2.90726 3.52948 0.12374 3.42820 42 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 43 0.14968 3.32315 2.76467 3.21947 43 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 44 0.14968 3.32315 2.76467 3.21947 44 - - 1.38629 1.38629 1.38629 1.38629 0.03810 3.97957 3.97957 1.46634 0.26236 1.09861 0.40547 45 3.03132 2.55863 3.08165 0.18819 45 - - 1.38629 1.38629 1.38629 1.38629 0.01923 3.96070 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:37:51 2012 NSEQ 2 EFFN 2.000000 CKSUM 1458850192 STATS LOCAL MSV -7.6216 0.72751 STATS LOCAL VITERBI -8.2841 0.72751 STATS LOCAL FORWARD -3.4635 0.72751 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59062 1.34929 1.16405 1.49362 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:23 2012 NSEQ 8 EFFN 3.410156 CKSUM 3299966898 STATS LOCAL MSV -7.1470 0.71933 STATS LOCAL VITERBI -7.8187 0.71933 STATS LOCAL FORWARD -3.7441 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.60947 1.21747 1.18790 1.61360 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 0.00000 * 1 2.96668 3.61569 0.11415 3.52327 1 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 2 3.11656 2.61290 3.16364 0.17424 2 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 3 3.46489 0.12648 3.51299 2.85207 3 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 4 3.46489 0.12648 3.51299 2.85207 4 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 5 2.96668 3.61569 0.11415 3.52327 5 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 6 3.11656 2.61290 3.16364 0.17424 6 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 7 2.96668 3.61569 0.11415 3.52327 7 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 8 2.96668 3.61569 0.11415 3.52327 8 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 9 0.13830 3.40786 2.81982 3.31216 9 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 10 2.96668 3.61569 0.11415 3.52327 10 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 11 0.13830 3.40786 2.81982 3.31216 11 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 12 1.19698 1.21537 2.03661 1.30629 12 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 13 0.13830 3.40786 2.81982 3.31216 13 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 14 2.46929 0.67848 2.54147 1.11104 14 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 15 0.13830 3.40786 2.81982 3.31216 15 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 16 3.11656 2.61290 3.16364 0.17424 16 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 17 3.46489 0.12648 3.51299 2.85207 17 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 18 3.46489 0.12648 3.51299 2.85207 18 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 19 0.13830 3.40786 2.81982 3.31216 19 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 20 2.96668 3.61569 0.11415 3.52327 20 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 21 2.96668 3.61569 0.11415 3.52327 21 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 22 0.13830 3.40786 2.81982 3.31216 22 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 23 3.46489 0.12648 3.51299 2.85207 23 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 24 3.46489 0.12648 3.51299 2.85207 24 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 25 0.13830 3.40786 2.81982 3.31216 25 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 26 3.46489 0.12648 3.51299 2.85207 26 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 27 3.11656 2.61290 3.16364 0.17424 27 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 28 3.46489 0.12648 3.51299 2.85207 28 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 29 3.46489 0.12648 3.51299 2.85207 29 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 30 3.11656 2.61290 3.16364 0.17424 30 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 31 2.96668 3.61569 0.11415 3.52327 31 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 32 3.11656 2.61290 3.16364 0.17424 32 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 33 3.46489 0.12648 3.51299 2.85207 33 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 34 3.11656 2.61290 3.16364 0.17424 34 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 35 2.96668 3.61569 0.11415 3.52327 35 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 36 0.13830 3.40786 2.81982 3.31216 36 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 37 2.96668 3.61569 0.11415 3.52327 37 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 38 2.96668 3.61569 0.11415 3.52327 38 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 39 2.96668 3.61569 0.11415 3.52327 39 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 40 3.46489 0.12648 3.51299 2.85207 40 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 41 3.46489 0.12648 3.51299 2.85207 41 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 42 2.96668 3.61569 0.11415 3.52327 42 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 43 2.96668 3.61569 0.11415 3.52327 43 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 44 3.46489 0.12648 3.51299 2.85207 44 - - 1.38629 1.38629 1.38629 1.38629 0.03630 4.02716 4.02716 1.46634 0.26236 1.09861 0.40547 45 3.11656 2.61290 3.16364 0.17424 45 - - 1.38629 1.38629 1.38629 1.38629 0.01832 4.00918 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:55 2012 NSEQ 2 EFFN 2.000000 CKSUM 3131929729 STATS LOCAL MSV -7.4499 0.72770 STATS LOCAL VITERBI -8.1418 0.72770 STATS LOCAL FORWARD -3.7577 0.72770 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59063 1.34506 1.21353 1.43325 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentyfivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:02 2012 NSEQ 2 EFFN 2.000000 CKSUM 1347837329 STATS LOCAL MSV -7.4541 0.72721 STATS LOCAL VITERBI -8.2939 0.72721 STATS LOCAL FORWARD -3.3636 0.72721 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92452 1.19705 1.08122 1.54745 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentyfiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:10 2012 NSEQ 12 EFFN 3.647461 CKSUM 1179886168 STATS LOCAL MSV -7.3738 0.71933 STATS LOCAL VITERBI -7.8429 0.71933 STATS LOCAL FORWARD -4.1131 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81069 1.27123 1.12801 1.45975 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 0.00000 * 1 3.54628 0.11749 3.59080 2.91069 1 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 2 3.18923 2.65900 3.23350 0.16327 2 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 3 2.47123 0.80024 2.54304 0.94759 3 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 4 3.01510 3.68679 0.10688 3.60196 4 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 5 2.78751 1.78994 2.84762 0.33761 5 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 6 3.01510 3.68679 0.10688 3.60196 6 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 7 0.12954 3.47883 2.86559 3.38998 7 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 8 3.54628 0.11749 3.59080 2.91069 8 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 9 3.54628 0.11749 3.59080 2.91069 9 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 10 0.68274 2.28073 2.23327 1.25393 10 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 11 0.12954 3.47883 2.86559 3.38998 11 - - 1.38629 1.38629 1.38629 1.38629 0.16186 4.06859 2.02240 1.46634 0.26236 1.09861 0.40547 12 0.48278 2.39656 2.26531 1.67075 12 - - 1.38629 1.38629 1.38629 1.38629 0.03942 3.94616 3.94616 1.46634 0.26236 0.22988 1.58293 13 3.01510 3.68679 0.10688 3.60196 13 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 14 0.12954 3.47883 2.86559 3.38998 14 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 15 3.01510 3.68679 0.10688 3.60196 15 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 16 2.95542 2.11884 3.00916 0.25046 16 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 17 3.54628 0.11749 3.59080 2.91069 17 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 18 3.54628 0.11749 3.59080 2.91069 18 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 19 3.18923 2.65900 3.23350 0.16327 19 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 20 3.01510 3.68679 0.10688 3.60196 20 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 21 3.01510 3.68679 0.10688 3.60196 21 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 22 3.01510 3.68679 0.10688 3.60196 22 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 23 3.54628 0.11749 3.59080 2.91069 23 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 24 3.54628 0.11749 3.59080 2.91069 24 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 25 0.12954 3.47883 2.86559 3.38998 25 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 26 3.54628 0.11749 3.59080 2.91069 26 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 27 3.01510 3.68679 0.10688 3.60196 27 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 28 3.54628 0.11749 3.59080 2.91069 28 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 29 3.54628 0.11749 3.59080 2.91069 29 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 30 3.18923 2.65900 3.23350 0.16327 30 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 31 3.01510 3.68679 0.10688 3.60196 31 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 32 3.18923 2.65900 3.23350 0.16327 32 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 33 3.54628 0.11749 3.59080 2.91069 33 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 34 3.18923 2.65900 3.23350 0.16327 34 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 35 3.01510 3.68679 0.10688 3.60196 35 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 36 0.12954 3.47883 2.86559 3.38998 36 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 37 3.01510 3.68679 0.10688 3.60196 37 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 38 3.01510 3.68679 0.10688 3.60196 38 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 39 3.01510 3.68679 0.10688 3.60196 39 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 40 3.18923 2.65900 3.23350 0.16327 40 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 41 3.54628 0.11749 3.59080 2.91069 41 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 42 3.01510 3.68679 0.10688 3.60196 42 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 43 3.01510 3.68679 0.10688 3.60196 43 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 44 3.18923 2.65900 3.23350 0.16327 44 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 45 3.18923 2.65900 3.23350 0.16327 45 - - 1.38629 1.38629 1.38629 1.38629 0.01755 4.05134 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:53 2012 NSEQ 4 EFFN 3.183594 CKSUM 3050269107 STATS LOCAL MSV -8.1539 0.71932 STATS LOCAL VITERBI -7.6627 0.71932 STATS LOCAL FORWARD -3.6691 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05456 1.20166 1.14804 1.37082 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 * 1 3.38051 0.13666 3.43217 2.79055 1 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 2 2.91546 3.54130 0.12237 3.44120 2 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 3 2.91546 3.54130 0.12237 3.44120 3 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 4 0.14807 3.33468 2.77222 3.23207 4 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 5 3.38051 0.13666 3.43217 2.79055 5 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 6 0.14807 3.33468 2.77222 3.23207 6 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 7 3.04283 2.56598 3.09273 0.18624 7 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 8 2.91546 3.54130 0.12237 3.44120 8 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 9 2.91546 3.54130 0.12237 3.44120 9 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 10 2.91546 3.54130 0.12237 3.44120 10 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 11 3.38051 0.13666 3.43217 2.79055 11 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 12 3.04283 2.56598 3.09273 0.18624 12 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 13 3.04283 2.56598 3.09273 0.18624 13 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 14 2.91546 3.54130 0.12237 3.44120 14 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 15 3.04283 2.56598 3.09273 0.18624 15 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 16 3.38051 0.13666 3.43217 2.79055 16 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 17 3.38051 0.13666 3.43217 2.79055 17 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 18 3.38051 0.13666 3.43217 2.79055 18 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 19 3.38051 0.13666 3.43217 2.79055 19 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 20 3.04283 2.56598 3.09273 0.18624 20 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 21 2.91546 3.54130 0.12237 3.44120 21 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 22 3.04283 2.56598 3.09273 0.18624 22 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 23 3.38051 0.13666 3.43217 2.79055 23 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 24 3.38051 0.13666 3.43217 2.79055 24 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 25 0.14807 3.33468 2.77222 3.23207 25 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 26 3.04283 2.56598 3.09273 0.18624 26 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 27 2.91546 3.54130 0.12237 3.44120 27 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 28 3.04283 2.56598 3.09273 0.18624 28 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 29 3.38051 0.13666 3.43217 2.79055 29 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 30 3.04283 2.56598 3.09273 0.18624 30 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 31 2.91546 3.54130 0.12237 3.44120 31 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 32 2.91546 3.54130 0.12237 3.44120 32 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 33 3.38051 0.13666 3.43217 2.79055 33 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 34 3.04283 2.56598 3.09273 0.18624 34 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 35 3.38051 0.13666 3.43217 2.79055 35 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 36 0.14807 3.33468 2.77222 3.23207 36 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 37 2.91546 3.54130 0.12237 3.44120 37 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 38 2.91546 3.54130 0.12237 3.44120 38 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 39 2.91546 3.54130 0.12237 3.44120 39 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 40 3.04283 2.56598 3.09273 0.18624 40 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 41 3.38051 0.13666 3.43217 2.79055 41 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 42 2.91546 3.54130 0.12237 3.44120 42 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 43 2.91546 3.54130 0.12237 3.44120 43 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 44 3.38051 0.13666 3.43217 2.79055 44 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 45 3.04283 2.56598 3.09273 0.18624 45 - - 1.38629 1.38629 1.38629 1.38629 0.01911 3.96719 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:43:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 2752150723 STATS LOCAL MSV -7.4583 0.72844 STATS LOCAL VITERBI -8.2852 0.72844 STATS LOCAL FORWARD -3.7436 0.72844 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65923 1.44280 1.31893 1.18408 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:46 2012 NSEQ 3 EFFN 3.000000 CKSUM 42895608 STATS LOCAL MSV -7.7972 0.72095 STATS LOCAL VITERBI -7.8414 0.72095 STATS LOCAL FORWARD -3.6469 0.72095 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.57109 1.55471 1.08177 1.41908 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.66361 1.42357 2.15007 2.05820 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.43440 0.61908 2.50724 1.22957 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.86982 3.47591 0.13017 3.36931 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentysixa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:20 2012 NSEQ 27 EFFN 3.312378 CKSUM 1001928202 STATS LOCAL MSV -8.0269 0.71933 STATS LOCAL VITERBI -7.7446 0.71933 STATS LOCAL FORWARD -3.9740 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21823 1.45369 1.60573 1.31008 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 0.00000 * 1 2.94522 3.58440 0.11753 3.48872 1 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 2 3.42930 0.13066 3.47892 2.82623 2 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 3 0.14233 3.37696 2.79978 3.27831 3 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 4 3.42930 0.13066 3.47892 2.82623 4 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 5 0.14233 3.37696 2.79978 3.27831 5 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 6 3.08528 2.59302 3.13356 0.17921 6 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 7 3.42930 0.13066 3.47892 2.82623 7 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 8 2.94522 3.58440 0.11753 3.48872 8 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 9 3.08528 2.59302 3.13356 0.17921 9 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 10 0.14233 3.37696 2.79978 3.27831 10 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 11 3.42930 0.13066 3.47892 2.82623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 12 0.14233 3.37696 2.79978 3.27831 12 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 13 0.14233 3.37696 2.79978 3.27831 13 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 14 3.42930 0.13066 3.47892 2.82623 14 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 15 0.14233 3.37696 2.79978 3.27831 15 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 16 2.94522 3.58440 0.11753 3.48872 16 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 17 3.08528 2.59302 3.13356 0.17921 17 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 18 0.14233 3.37696 2.79978 3.27831 18 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 19 3.42930 0.13066 3.47892 2.82623 19 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 20 2.94522 3.58440 0.11753 3.48872 20 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 21 0.14233 3.37696 2.79978 3.27831 21 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 22 3.08528 2.59302 3.13356 0.17921 22 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 23 2.94522 3.58440 0.11753 3.48872 23 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 24 3.08528 2.59302 3.13356 0.17921 24 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 25 0.14233 3.37696 2.79978 3.27831 25 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 26 3.42930 0.13066 3.47892 2.82623 26 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 27 0.14233 3.37696 2.79978 3.27831 27 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 28 3.42930 0.13066 3.47892 2.82623 28 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 29 0.14233 3.37696 2.79978 3.27831 29 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 30 3.08528 2.59302 3.13356 0.17921 30 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 31 3.08528 2.59302 3.13356 0.17921 31 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 32 3.08528 2.59302 3.13356 0.17921 32 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 33 3.08528 2.59302 3.13356 0.17921 33 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 34 3.08528 2.59302 3.13356 0.17921 34 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 35 2.94522 3.58440 0.11753 3.48872 35 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 36 0.14233 3.37696 2.79978 3.27831 36 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 37 2.94522 3.58440 0.11753 3.48872 37 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 38 3.08528 2.59302 3.13356 0.17921 38 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 39 2.94522 3.58440 0.11753 3.48872 39 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 40 3.42930 0.13066 3.47892 2.82623 40 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 41 3.42930 0.13066 3.47892 2.82623 41 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 42 3.08528 2.59302 3.13356 0.17921 42 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 43 0.14233 3.37696 2.79978 3.27831 43 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 44 3.08528 2.59302 3.13356 0.17921 44 - - 1.38629 1.38629 1.38629 1.38629 0.03696 4.00958 4.00958 1.46634 0.26236 1.09861 0.40547 45 0.14233 3.37696 2.79978 3.27831 45 - - 1.38629 1.38629 1.38629 1.38629 0.01865 3.99127 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentysixb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:27 2012 NSEQ 6 EFFN 3.336914 CKSUM 1511690450 STATS LOCAL MSV -8.0062 0.71933 STATS LOCAL VITERBI -7.8597 0.71933 STATS LOCAL FORWARD -4.1594 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27761 1.37703 1.70358 1.24848 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 0.00000 * 1 3.43835 0.12958 3.48758 2.83281 1 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 2 0.14130 3.38481 2.80488 3.28690 2 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 3 3.43835 0.12958 3.48758 2.83281 3 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 4 0.14130 3.38481 2.80488 3.28690 4 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 5 3.09320 2.59806 3.14118 0.17794 5 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 6 3.43835 0.12958 3.48758 2.83281 6 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 7 2.95070 3.59237 0.11666 3.49752 7 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 8 3.09320 2.59806 3.14118 0.17794 8 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 9 0.14130 3.38481 2.80488 3.28690 9 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 10 3.43835 0.12958 3.48758 2.83281 10 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 11 3.09320 2.59806 3.14118 0.17794 11 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 12 0.14130 3.38481 2.80488 3.28690 12 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 13 3.43835 0.12958 3.48758 2.83281 13 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 14 3.43835 0.12958 3.48758 2.83281 14 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 15 0.14130 3.38481 2.80488 3.28690 15 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 16 2.95070 3.59237 0.11666 3.49752 16 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 17 3.09320 2.59806 3.14118 0.17794 17 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 18 0.14130 3.38481 2.80488 3.28690 18 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 19 3.43835 0.12958 3.48758 2.83281 19 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 20 2.95070 3.59237 0.11666 3.49752 20 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 21 0.14130 3.38481 2.80488 3.28690 21 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 22 3.09320 2.59806 3.14118 0.17794 22 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 23 2.95070 3.59237 0.11666 3.49752 23 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 24 3.09320 2.59806 3.14118 0.17794 24 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 25 0.14130 3.38481 2.80488 3.28690 25 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 26 3.43835 0.12958 3.48758 2.83281 26 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 27 0.14130 3.38481 2.80488 3.28690 27 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 28 3.43835 0.12958 3.48758 2.83281 28 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 29 0.14130 3.38481 2.80488 3.28690 29 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 30 3.09320 2.59806 3.14118 0.17794 30 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 31 3.09320 2.59806 3.14118 0.17794 31 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 32 3.09320 2.59806 3.14118 0.17794 32 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 33 3.09320 2.59806 3.14118 0.17794 33 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 34 3.09320 2.59806 3.14118 0.17794 34 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 35 2.95070 3.59237 0.11666 3.49752 35 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 36 0.14130 3.38481 2.80488 3.28690 36 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 37 2.95070 3.59237 0.11666 3.49752 37 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 38 3.09320 2.59806 3.14118 0.17794 38 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 39 2.95070 3.59237 0.11666 3.49752 39 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 40 3.43835 0.12958 3.48758 2.83281 40 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 41 3.43835 0.12958 3.48758 2.83281 41 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 42 3.09320 2.59806 3.14118 0.17794 42 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 43 0.14130 3.38481 2.80488 3.28690 43 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 44 3.09320 2.59806 3.14118 0.17794 44 - - 1.38629 1.38629 1.38629 1.38629 0.03679 4.01402 4.01402 1.46634 0.26236 1.09861 0.40547 45 0.14130 3.38481 2.80488 3.28690 45 - - 1.38629 1.38629 1.38629 1.38629 0.01856 3.99580 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentysixc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:42:34 2012 NSEQ 3 EFFN 3.000000 CKSUM 2995473350 STATS LOCAL MSV -7.8423 0.72105 STATS LOCAL VITERBI -7.8409 0.72105 STATS LOCAL FORWARD -4.0058 0.72105 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38925 1.30984 1.63939 1.24905 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 1.34853 2.58976 0.54705 2.44542 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.15719 3.27118 2.73043 3.16274 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.97980 2.52563 3.03204 0.19727 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 3.30705 0.14631 3.36166 2.73626 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.97980 2.52563 3.03204 0.19727 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:43 2012 NSEQ 5 EFFN 3.168945 CKSUM 2402151252 STATS LOCAL MSV -8.2245 0.71933 STATS LOCAL VITERBI -7.7908 0.71933 STATS LOCAL FORWARD -3.7390 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.19200 1.20214 1.09639 1.37168 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 * 1 3.37482 0.13738 3.42671 2.78637 1 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 2 2.91196 3.53626 0.12295 3.43565 2 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 3 2.91196 3.53626 0.12295 3.43565 3 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 4 0.14875 3.32976 2.76899 3.22669 4 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 5 3.37482 0.13738 3.42671 2.78637 5 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 6 3.37482 0.13738 3.42671 2.78637 6 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 7 2.91196 3.53626 0.12295 3.43565 7 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 8 2.91196 3.53626 0.12295 3.43565 8 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 9 2.91196 3.53626 0.12295 3.43565 9 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 10 2.91196 3.53626 0.12295 3.43565 10 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 11 3.03791 2.56284 3.08799 0.18707 11 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 12 3.03791 2.56284 3.08799 0.18707 12 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 13 3.37482 0.13738 3.42671 2.78637 13 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 14 2.91196 3.53626 0.12295 3.43565 14 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 15 3.03791 2.56284 3.08799 0.18707 15 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 16 3.37482 0.13738 3.42671 2.78637 16 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 17 3.37482 0.13738 3.42671 2.78637 17 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 18 3.37482 0.13738 3.42671 2.78637 18 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 19 3.37482 0.13738 3.42671 2.78637 19 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 20 3.03791 2.56284 3.08799 0.18707 20 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 21 2.91196 3.53626 0.12295 3.43565 21 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 22 3.03791 2.56284 3.08799 0.18707 22 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 23 3.37482 0.13738 3.42671 2.78637 23 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 24 3.37482 0.13738 3.42671 2.78637 24 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 25 0.14875 3.32976 2.76899 3.22669 25 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 26 3.03791 2.56284 3.08799 0.18707 26 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 27 2.91196 3.53626 0.12295 3.43565 27 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 28 3.03791 2.56284 3.08799 0.18707 28 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 29 3.37482 0.13738 3.42671 2.78637 29 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 30 3.03791 2.56284 3.08799 0.18707 30 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 31 2.91196 3.53626 0.12295 3.43565 31 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 32 2.91196 3.53626 0.12295 3.43565 32 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 33 3.37482 0.13738 3.42671 2.78637 33 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 34 3.03791 2.56284 3.08799 0.18707 34 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 35 3.37482 0.13738 3.42671 2.78637 35 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 36 0.14875 3.32976 2.76899 3.22669 36 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 37 2.91196 3.53626 0.12295 3.43565 37 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 38 2.91196 3.53626 0.12295 3.43565 38 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 39 2.91196 3.53626 0.12295 3.43565 39 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 40 3.03791 2.56284 3.08799 0.18707 40 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 41 3.37482 0.13738 3.42671 2.78637 41 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 42 2.91196 3.53626 0.12295 3.43565 42 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 43 2.91196 3.53626 0.12295 3.43565 43 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 44 3.03791 2.56284 3.08799 0.18707 44 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 45 3.03791 2.56284 3.08799 0.18707 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96442 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:41:31 2012 NSEQ 4 EFFN 3.285156 CKSUM 2170479953 STATS LOCAL MSV -8.1192 0.71931 STATS LOCAL VITERBI -7.6756 0.71931 STATS LOCAL FORWARD -3.9175 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05755 1.37480 1.20037 1.14488 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 * 1 3.41917 0.13188 3.46922 2.81884 1 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 2 2.93908 3.57547 0.11851 3.47887 2 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 3 2.93908 3.57547 0.11851 3.47887 3 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 4 0.14350 3.36817 2.79406 3.26870 4 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 5 3.41917 0.13188 3.46922 2.81884 5 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 6 3.41917 0.13188 3.46922 2.81884 6 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 7 2.93908 3.57547 0.11851 3.47887 7 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 8 3.07642 2.58739 3.12504 0.18065 8 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 9 2.93908 3.57547 0.11851 3.47887 9 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 10 2.93908 3.57547 0.11851 3.47887 10 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 11 3.07642 2.58739 3.12504 0.18065 11 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 12 3.07642 2.58739 3.12504 0.18065 12 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 13 3.07642 2.58739 3.12504 0.18065 13 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 14 3.07642 2.58739 3.12504 0.18065 14 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 15 3.07642 2.58739 3.12504 0.18065 15 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 16 3.41917 0.13188 3.46922 2.81884 16 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 17 3.07642 2.58739 3.12504 0.18065 17 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 18 0.14350 3.36817 2.79406 3.26870 18 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 19 3.41917 0.13188 3.46922 2.81884 19 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 20 3.07642 2.58739 3.12504 0.18065 20 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 21 2.93908 3.57547 0.11851 3.47887 21 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 22 3.07642 2.58739 3.12504 0.18065 22 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 23 3.41917 0.13188 3.46922 2.81884 23 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 24 3.41917 0.13188 3.46922 2.81884 24 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 25 0.14350 3.36817 2.79406 3.26870 25 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 26 3.07642 2.58739 3.12504 0.18065 26 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 27 2.93908 3.57547 0.11851 3.47887 27 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 28 3.07642 2.58739 3.12504 0.18065 28 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 29 3.41917 0.13188 3.46922 2.81884 29 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 30 3.07642 2.58739 3.12504 0.18065 30 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 31 2.93908 3.57547 0.11851 3.47887 31 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 32 2.93908 3.57547 0.11851 3.47887 32 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 33 3.41917 0.13188 3.46922 2.81884 33 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 34 3.07642 2.58739 3.12504 0.18065 34 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 35 3.41917 0.13188 3.46922 2.81884 35 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 36 0.14350 3.36817 2.79406 3.26870 36 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 37 2.93908 3.57547 0.11851 3.47887 37 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 38 2.93908 3.57547 0.11851 3.47887 38 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 39 2.93908 3.57547 0.11851 3.47887 39 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 40 3.07642 2.58739 3.12504 0.18065 40 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 41 3.41917 0.13188 3.46922 2.81884 41 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 42 2.93908 3.57547 0.11851 3.47887 42 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 43 2.93908 3.57547 0.11851 3.47887 43 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 44 3.07642 2.58739 3.12504 0.18065 44 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 45 3.07642 2.58739 3.12504 0.18065 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Metazoa_58S_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 25 14:32:02 2012 NSEQ 2 EFFN 2.000000 CKSUM 2895312499 STATS LOCAL MSV -7.3425 0.72926 STATS LOCAL VITERBI -8.4252 0.72926 STATS LOCAL FORWARD -3.6064 0.72926 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.49454 1.29882 1.37030 1.39126 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 1.01448 1.11006 1.95471 1.79419 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.15554 1.00938 2.23102 0.88601 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eighta_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:27 2012 NSEQ 6 EFFN 3.717773 CKSUM 2863453789 STATS LOCAL MSV -7.0487 0.71932 STATS LOCAL VITERBI -7.6344 0.71932 STATS LOCAL FORWARD -4.3819 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38691 1.48592 1.27857 1.40476 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 0.00000 * 1 3.20992 2.67212 3.25337 0.16030 1 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 2 3.20992 2.67212 3.25337 0.16030 2 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 3 0.12719 3.49881 2.87844 3.41192 3 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 4 2.56541 0.58969 2.63638 1.21405 4 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 5 3.56911 0.11510 3.61260 2.92701 5 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 6 3.56911 0.11510 3.61260 2.92701 6 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 7 3.20992 2.67212 3.25337 0.16030 7 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 8 3.02853 3.70662 0.10494 3.62394 8 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 9 0.12719 3.49881 2.87844 3.41192 9 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 10 0.12719 3.49881 2.87844 3.41192 10 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 11 3.56911 0.11510 3.61260 2.92701 11 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 12 3.02853 3.70662 0.10494 3.62394 12 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 13 3.02853 3.70662 0.10494 3.62394 13 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 14 3.20992 2.67212 3.25337 0.16030 14 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 15 3.02853 3.70662 0.10494 3.62394 15 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 16 3.02853 3.70662 0.10494 3.62394 16 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 17 0.12719 3.49881 2.87844 3.41192 17 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 18 3.20992 2.67212 3.25337 0.16030 18 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 19 3.56911 0.11510 3.61260 2.92701 19 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 20 0.12719 3.49881 2.87844 3.41192 20 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 21 3.56911 0.11510 3.61260 2.92701 21 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 22 3.20992 2.67212 3.25337 0.16030 22 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 23 3.20992 2.67212 3.25337 0.16030 23 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 24 3.02853 3.70662 0.10494 3.62394 24 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 25 3.02853 3.70662 0.10494 3.62394 25 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 26 3.56911 0.11510 3.61260 2.92701 26 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 27 3.20992 2.67212 3.25337 0.16030 27 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 28 3.56911 0.11510 3.61260 2.92701 28 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 29 3.02853 3.70662 0.10494 3.62394 29 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 30 3.20992 2.67212 3.25337 0.16030 30 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 31 1.34314 2.72390 0.51432 2.58430 31 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 32 1.34314 2.72390 0.51432 2.58430 32 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 33 0.48700 2.71970 1.41005 2.58348 33 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 34 3.20992 2.67212 3.25337 0.16030 34 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 35 3.56911 0.11510 3.61260 2.92701 35 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 36 3.02853 3.70662 0.10494 3.62394 36 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 37 0.12719 3.49881 2.87844 3.41192 37 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 38 3.20992 2.67212 3.25337 0.16030 38 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 39 3.02853 3.70662 0.10494 3.62394 39 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 40 0.12719 3.49881 2.87844 3.41192 40 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 41 0.12719 3.49881 2.87844 3.41192 41 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 42 3.02853 3.70662 0.10494 3.62394 42 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 43 0.12719 3.49881 2.87844 3.41192 43 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 44 0.12719 3.49881 2.87844 3.41192 44 - - 1.38629 1.38629 1.38629 1.38629 0.03438 4.08055 4.08055 1.46634 0.26236 1.09861 0.40547 45 3.56911 0.11510 3.61260 2.92701 45 - - 1.38629 1.38629 1.38629 1.38629 0.01734 4.06350 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eightb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:34 2012 NSEQ 5 EFFN 3.139648 CKSUM 359213837 STATS LOCAL MSV -8.0901 0.71933 STATS LOCAL VITERBI -7.7074 0.71933 STATS LOCAL FORWARD -4.3936 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40304 1.33441 1.19644 1.66830 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 0.00000 * 1 3.36335 0.13885 3.41571 2.77793 1 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 2 0.15014 3.31984 2.76249 3.21585 2 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 3 0.15014 3.31984 2.76249 3.21585 3 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 4 3.36335 0.13885 3.41571 2.77793 4 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 5 3.36335 0.13885 3.41571 2.77793 5 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 6 3.36335 0.13885 3.41571 2.77793 6 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 7 3.02802 2.55652 3.07847 0.18876 7 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 8 2.90489 3.52608 0.12414 3.42445 8 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 9 0.15014 3.31984 2.76249 3.21585 9 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 10 0.15014 3.31984 2.76249 3.21585 10 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 11 3.36335 0.13885 3.41571 2.77793 11 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 12 2.90489 3.52608 0.12414 3.42445 12 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 13 2.90489 3.52608 0.12414 3.42445 13 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 14 3.02802 2.55652 3.07847 0.18876 14 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 15 2.90489 3.52608 0.12414 3.42445 15 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 16 2.90489 3.52608 0.12414 3.42445 16 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 17 0.15014 3.31984 2.76249 3.21585 17 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 18 3.02802 2.55652 3.07847 0.18876 18 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 19 3.36335 0.13885 3.41571 2.77793 19 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 20 0.15014 3.31984 2.76249 3.21585 20 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 21 3.36335 0.13885 3.41571 2.77793 21 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 22 3.02802 2.55652 3.07847 0.18876 22 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 23 3.36335 0.13885 3.41571 2.77793 23 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 24 2.90489 3.52608 0.12414 3.42445 24 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 25 2.90489 3.52608 0.12414 3.42445 25 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 26 3.36335 0.13885 3.41571 2.77793 26 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 27 3.02802 2.55652 3.07847 0.18876 27 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 28 3.36335 0.13885 3.41571 2.77793 28 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 29 2.90489 3.52608 0.12414 3.42445 29 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 30 3.02802 2.55652 3.07847 0.18876 30 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 31 2.90489 3.52608 0.12414 3.42445 31 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 32 2.90489 3.52608 0.12414 3.42445 32 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 33 2.90489 3.52608 0.12414 3.42445 33 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 34 3.02802 2.55652 3.07847 0.18876 34 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 35 3.36335 0.13885 3.41571 2.77793 35 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 36 2.90489 3.52608 0.12414 3.42445 36 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 37 0.15014 3.31984 2.76249 3.21585 37 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 38 3.02802 2.55652 3.07847 0.18876 38 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 39 2.90489 3.52608 0.12414 3.42445 39 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 40 0.15014 3.31984 2.76249 3.21585 40 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 41 0.15014 3.31984 2.76249 3.21585 41 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 42 2.90489 3.52608 0.12414 3.42445 42 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 43 0.15014 3.31984 2.76249 3.21585 43 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 44 0.15014 3.31984 2.76249 3.21585 44 - - 1.38629 1.38629 1.38629 1.38629 0.03818 3.97775 3.97775 1.46634 0.26236 1.09861 0.40547 45 3.36335 0.13885 3.41571 2.77793 45 - - 1.38629 1.38629 1.38629 1.38629 0.01927 3.95884 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eightc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:40 2012 NSEQ 6 EFFN 3.131836 CKSUM 2150464050 STATS LOCAL MSV -7.9202 0.71931 STATS LOCAL VITERBI -7.7385 0.71931 STATS LOCAL FORWARD -4.2104 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47401 1.33573 1.14243 1.66609 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 0.00000 * 1 3.02537 2.55482 3.07592 0.18922 1 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 2 3.36028 0.13924 3.41276 2.77566 2 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 3 0.15052 3.31717 2.76074 3.21294 3 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 4 3.36028 0.13924 3.41276 2.77566 4 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 5 3.36028 0.13924 3.41276 2.77566 5 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 6 3.36028 0.13924 3.41276 2.77566 6 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 7 0.15052 3.31717 2.76074 3.21294 7 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 8 2.90299 3.52335 0.12446 3.42144 8 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 9 2.90299 3.52335 0.12446 3.42144 9 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 10 0.15052 3.31717 2.76074 3.21294 10 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 11 3.36028 0.13924 3.41276 2.77566 11 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 12 2.90299 3.52335 0.12446 3.42144 12 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 13 2.90299 3.52335 0.12446 3.42144 13 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 14 3.02537 2.55482 3.07592 0.18922 14 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 15 2.90299 3.52335 0.12446 3.42144 15 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 16 2.90299 3.52335 0.12446 3.42144 16 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 17 0.15052 3.31717 2.76074 3.21294 17 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 18 3.02537 2.55482 3.07592 0.18922 18 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 19 3.36028 0.13924 3.41276 2.77566 19 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 20 0.15052 3.31717 2.76074 3.21294 20 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 21 3.36028 0.13924 3.41276 2.77566 21 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 22 3.02537 2.55482 3.07592 0.18922 22 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 23 3.36028 0.13924 3.41276 2.77566 23 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 24 2.90299 3.52335 0.12446 3.42144 24 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 25 2.90299 3.52335 0.12446 3.42144 25 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 26 3.36028 0.13924 3.41276 2.77566 26 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 27 3.02537 2.55482 3.07592 0.18922 27 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 28 3.36028 0.13924 3.41276 2.77566 28 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 29 2.90299 3.52335 0.12446 3.42144 29 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 30 3.02537 2.55482 3.07592 0.18922 30 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 31 2.90299 3.52335 0.12446 3.42144 31 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 32 2.90299 3.52335 0.12446 3.42144 32 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 33 2.90299 3.52335 0.12446 3.42144 33 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 34 3.02537 2.55482 3.07592 0.18922 34 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 35 3.36028 0.13924 3.41276 2.77566 35 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 36 2.90299 3.52335 0.12446 3.42144 36 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 37 0.15052 3.31717 2.76074 3.21294 37 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 38 3.02537 2.55482 3.07592 0.18922 38 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 39 2.90299 3.52335 0.12446 3.42144 39 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 40 0.15052 3.31717 2.76074 3.21294 40 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 41 0.15052 3.31717 2.76074 3.21294 41 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 42 2.90299 3.52335 0.12446 3.42144 42 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 43 0.15052 3.31717 2.76074 3.21294 43 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 44 0.15052 3.31717 2.76074 3.21294 44 - - 1.38629 1.38629 1.38629 1.38629 0.03823 3.97628 3.97628 1.46634 0.26236 1.09861 0.40547 45 3.36028 0.13924 3.41276 2.77566 45 - - 1.38629 1.38629 1.38629 1.38629 0.01930 3.95735 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eightd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:46 2012 NSEQ 4 EFFN 3.144531 CKSUM 621050015 STATS LOCAL MSV -8.0901 0.71931 STATS LOCAL VITERBI -7.7041 0.71931 STATS LOCAL FORWARD -4.3950 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40305 1.33436 1.19640 1.66841 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 0.00000 * 1 3.36527 0.13860 3.41755 2.77934 1 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 2 0.14991 3.32150 2.76358 3.21766 2 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 3 0.14991 3.32150 2.76358 3.21766 3 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 4 3.36527 0.13860 3.41755 2.77934 4 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 5 3.36527 0.13860 3.41755 2.77934 5 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 6 3.36527 0.13860 3.41755 2.77934 6 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 7 3.02967 2.55757 3.08006 0.18848 7 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 8 2.90608 3.52778 0.12394 3.42632 8 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 9 0.14991 3.32150 2.76358 3.21766 9 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 10 0.14991 3.32150 2.76358 3.21766 10 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 11 3.36527 0.13860 3.41755 2.77934 11 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 12 2.90608 3.52778 0.12394 3.42632 12 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 13 2.90608 3.52778 0.12394 3.42632 13 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 14 3.02967 2.55757 3.08006 0.18848 14 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 15 2.90608 3.52778 0.12394 3.42632 15 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 16 2.90608 3.52778 0.12394 3.42632 16 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 17 0.14991 3.32150 2.76358 3.21766 17 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 18 3.02967 2.55757 3.08006 0.18848 18 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 19 3.36527 0.13860 3.41755 2.77934 19 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 20 0.14991 3.32150 2.76358 3.21766 20 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 21 3.36527 0.13860 3.41755 2.77934 21 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 22 3.02967 2.55757 3.08006 0.18848 22 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 23 3.36527 0.13860 3.41755 2.77934 23 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 24 2.90608 3.52778 0.12394 3.42632 24 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 25 2.90608 3.52778 0.12394 3.42632 25 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 26 3.36527 0.13860 3.41755 2.77934 26 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 27 3.02967 2.55757 3.08006 0.18848 27 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 28 3.36527 0.13860 3.41755 2.77934 28 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 29 2.90608 3.52778 0.12394 3.42632 29 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 30 3.02967 2.55757 3.08006 0.18848 30 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 31 2.90608 3.52778 0.12394 3.42632 31 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 32 2.90608 3.52778 0.12394 3.42632 32 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 33 2.90608 3.52778 0.12394 3.42632 33 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 34 3.02967 2.55757 3.08006 0.18848 34 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 35 3.36527 0.13860 3.41755 2.77934 35 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 36 2.90608 3.52778 0.12394 3.42632 36 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 37 0.14991 3.32150 2.76358 3.21766 37 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 38 3.02967 2.55757 3.08006 0.18848 38 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 39 2.90608 3.52778 0.12394 3.42632 39 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 40 0.14991 3.32150 2.76358 3.21766 40 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 41 0.14991 3.32150 2.76358 3.21766 41 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 42 2.90608 3.52778 0.12394 3.42632 42 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 43 0.14991 3.32150 2.76358 3.21766 43 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 44 0.14991 3.32150 2.76358 3.21766 44 - - 1.38629 1.38629 1.38629 1.38629 0.03814 3.97866 3.97866 1.46634 0.26236 1.09861 0.40547 45 3.36527 0.13860 3.41755 2.77934 45 - - 1.38629 1.38629 1.38629 1.38629 0.01925 3.95977 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:25:28 2012 NSEQ 4 EFFN 3.402344 CKSUM 2172714013 STATS LOCAL MSV -7.1051 0.71931 STATS LOCAL VITERBI -7.8590 0.71931 STATS LOCAL FORWARD -3.9748 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32697 1.77182 1.24425 1.28540 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 0.00000 * 1 0.13862 3.40543 2.81825 3.30949 1 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 2 3.11409 2.61134 3.16126 0.17462 2 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 3 0.13862 3.40543 2.81825 3.30949 3 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 4 2.41957 0.95497 2.49149 0.81322 4 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 5 3.11409 2.61134 3.16126 0.17462 5 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 6 3.11409 2.61134 3.16126 0.17462 6 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 7 3.11409 2.61134 3.16126 0.17462 7 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 8 2.96500 3.61323 0.11441 3.52056 8 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 9 0.13862 3.40543 2.81825 3.30949 9 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 10 2.96500 3.61323 0.11441 3.52056 10 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 11 3.46209 0.12680 3.51031 2.85005 11 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 12 0.13862 3.40543 2.81825 3.30949 12 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 13 2.96500 3.61323 0.11441 3.52056 13 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 14 3.11409 2.61134 3.16126 0.17462 14 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 15 2.96500 3.61323 0.11441 3.52056 15 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 16 2.96500 3.61323 0.11441 3.52056 16 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 17 0.13862 3.40543 2.81825 3.30949 17 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 18 3.11409 2.61134 3.16126 0.17462 18 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 19 3.46209 0.12680 3.51031 2.85005 19 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 20 0.13862 3.40543 2.81825 3.30949 20 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 21 3.46209 0.12680 3.51031 2.85005 21 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 22 3.11409 2.61134 3.16126 0.17462 22 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 23 2.96500 3.61323 0.11441 3.52056 23 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 24 2.96500 3.61323 0.11441 3.52056 24 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 25 2.96500 3.61323 0.11441 3.52056 25 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 26 3.11409 2.61134 3.16126 0.17462 26 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 27 3.11409 2.61134 3.16126 0.17462 27 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 28 3.46209 0.12680 3.51031 2.85005 28 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 29 2.96500 3.61323 0.11441 3.52056 29 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 30 3.11409 2.61134 3.16126 0.17462 30 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 31 3.11409 2.61134 3.16126 0.17462 31 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 32 2.96500 3.61323 0.11441 3.52056 32 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 33 2.96500 3.61323 0.11441 3.52056 33 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 34 3.11409 2.61134 3.16126 0.17462 34 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 35 3.46209 0.12680 3.51031 2.85005 35 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 36 2.96500 3.61323 0.11441 3.52056 36 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 37 0.13862 3.40543 2.81825 3.30949 37 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 38 3.11409 2.61134 3.16126 0.17462 38 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 39 2.96500 3.61323 0.11441 3.52056 39 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 40 0.13862 3.40543 2.81825 3.30949 40 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 41 0.13862 3.40543 2.81825 3.30949 41 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 42 0.13862 3.40543 2.81825 3.30949 42 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 43 0.13862 3.40543 2.81825 3.30949 43 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 44 0.13862 3.40543 2.81825 3.30949 44 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 45 3.46209 0.12680 3.51031 2.85005 45 - - 1.38629 1.38629 1.38629 1.38629 0.01834 4.00776 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:19 2012 NSEQ 3 EFFN 3.000000 CKSUM 102249527 STATS LOCAL MSV -7.9658 0.72022 STATS LOCAL VITERBI -7.9027 0.72022 STATS LOCAL FORWARD -4.1930 0.72022 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40169 1.39125 1.31583 1.44052 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.30705 0.14631 3.36166 2.73626 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:23:16 2012 NSEQ 9 EFFN 3.168457 CKSUM 1135211888 STATS LOCAL MSV -8.0522 0.71931 STATS LOCAL VITERBI -7.8212 0.71931 STATS LOCAL FORWARD -4.0461 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40316 1.39893 1.19534 1.58612 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 0.00000 * 1 3.03775 2.56273 3.08783 0.18710 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 2 3.37463 0.13741 3.42653 2.78623 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 3 0.14877 3.32959 2.76888 3.22651 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 4 3.37463 0.13741 3.42653 2.78623 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 5 0.14877 3.32959 2.76888 3.22651 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 6 3.37463 0.13741 3.42653 2.78623 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 7 3.37463 0.13741 3.42653 2.78623 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 8 2.91185 3.53609 0.12297 3.43546 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 9 3.03775 2.56273 3.08783 0.18710 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 10 0.14877 3.32959 2.76888 3.22651 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 11 3.37463 0.13741 3.42653 2.78623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 12 0.14877 3.32959 2.76888 3.22651 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 13 2.91185 3.53609 0.12297 3.43546 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 14 3.03775 2.56273 3.08783 0.18710 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 15 2.91185 3.53609 0.12297 3.43546 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 16 2.91185 3.53609 0.12297 3.43546 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 17 0.14877 3.32959 2.76888 3.22651 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 18 3.03775 2.56273 3.08783 0.18710 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 19 3.37463 0.13741 3.42653 2.78623 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 20 0.14877 3.32959 2.76888 3.22651 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 21 3.37463 0.13741 3.42653 2.78623 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 22 3.03775 2.56273 3.08783 0.18710 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 23 3.03775 2.56273 3.08783 0.18710 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 24 2.91185 3.53609 0.12297 3.43546 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 25 2.91185 3.53609 0.12297 3.43546 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 26 3.37463 0.13741 3.42653 2.78623 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 27 3.03775 2.56273 3.08783 0.18710 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 28 3.37463 0.13741 3.42653 2.78623 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 29 2.91185 3.53609 0.12297 3.43546 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 30 2.91185 3.53609 0.12297 3.43546 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 31 2.91185 3.53609 0.12297 3.43546 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 32 2.91185 3.53609 0.12297 3.43546 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 33 2.91185 3.53609 0.12297 3.43546 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 34 3.03775 2.56273 3.08783 0.18710 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 35 3.37463 0.13741 3.42653 2.78623 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 36 2.91185 3.53609 0.12297 3.43546 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 37 0.14877 3.32959 2.76888 3.22651 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 38 3.03775 2.56273 3.08783 0.18710 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 39 2.91185 3.53609 0.12297 3.43546 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 40 0.14877 3.32959 2.76888 3.22651 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 41 0.14877 3.32959 2.76888 3.22651 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 42 2.91185 3.53609 0.12297 3.43546 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 43 0.14877 3.32959 2.76888 3.22651 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 44 0.14877 3.32959 2.76888 3.22651 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 45 3.37463 0.13741 3.42653 2.78623 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96432 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:34 2012 NSEQ 2 EFFN 2.000000 CKSUM 2657386057 STATS LOCAL MSV -7.6114 0.72740 STATS LOCAL VITERBI -8.1839 0.72740 STATS LOCAL FORWARD -3.5106 0.72740 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.52168 1.35229 1.16662 1.55311 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:41 2012 NSEQ 6 EFFN 3.413086 CKSUM 1109677504 STATS LOCAL MSV -7.3172 0.71933 STATS LOCAL VITERBI -7.5061 0.71933 STATS LOCAL FORWARD -4.2818 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39650 1.43701 1.27755 1.44315 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 * 1 3.11748 2.61349 3.16453 0.17409 1 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 2 3.46593 0.12636 3.51399 2.85283 2 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 3 0.13819 3.40877 2.82041 3.31315 3 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 4 3.46593 0.12636 3.51399 2.85283 4 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 5 3.11748 2.61349 3.16453 0.17409 5 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 6 3.46593 0.12636 3.51399 2.85283 6 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 7 3.11748 2.61349 3.16453 0.17409 7 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 8 0.13819 3.40877 2.82041 3.31315 8 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 9 0.13819 3.40877 2.82041 3.31315 9 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 10 2.96731 3.61661 0.11405 3.52429 10 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 11 3.46593 0.12636 3.51399 2.85283 11 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 12 2.96731 3.61661 0.11405 3.52429 12 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 13 2.96731 3.61661 0.11405 3.52429 13 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 14 3.11748 2.61349 3.16453 0.17409 14 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 15 2.96731 3.61661 0.11405 3.52429 15 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 16 2.96731 3.61661 0.11405 3.52429 16 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 17 0.13819 3.40877 2.82041 3.31315 17 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 18 3.11748 2.61349 3.16453 0.17409 18 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 19 3.46593 0.12636 3.51399 2.85283 19 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 20 0.13819 3.40877 2.82041 3.31315 20 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 21 3.46593 0.12636 3.51399 2.85283 21 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 22 3.11748 2.61349 3.16453 0.17409 22 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 23 2.74264 1.80999 2.80364 0.34058 23 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 24 2.96731 3.61661 0.11405 3.52429 24 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 25 2.96731 3.61661 0.11405 3.52429 25 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 26 3.46593 0.12636 3.51399 2.85283 26 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 27 3.11748 2.61349 3.16453 0.17409 27 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 28 3.46593 0.12636 3.51399 2.85283 28 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 29 0.13819 3.40877 2.82041 3.31315 29 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 30 3.11748 2.61349 3.16453 0.17409 30 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 31 2.96731 3.61661 0.11405 3.52429 31 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 32 2.15655 1.42170 0.64537 2.13283 32 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 33 2.96731 3.61661 0.11405 3.52429 33 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 34 3.11748 2.61349 3.16453 0.17409 34 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 35 3.46593 0.12636 3.51399 2.85283 35 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 36 2.96731 3.61661 0.11405 3.52429 36 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 37 0.13819 3.40877 2.82041 3.31315 37 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 38 3.11748 2.61349 3.16453 0.17409 38 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 39 2.96731 3.61661 0.11405 3.52429 39 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 40 0.13819 3.40877 2.82041 3.31315 40 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 41 0.13819 3.40877 2.82041 3.31315 41 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 42 2.96731 3.61661 0.11405 3.52429 42 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 43 0.13819 3.40877 2.82041 3.31315 43 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 44 0.13819 3.40877 2.82041 3.31315 44 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 45 3.46593 0.12636 3.51399 2.85283 45 - - 1.38629 1.38629 1.38629 1.38629 0.01831 4.00971 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:15 2012 NSEQ 18 EFFN 3.476074 CKSUM 217135792 STATS LOCAL MSV -7.4129 0.71931 STATS LOCAL VITERBI -7.8161 0.71931 STATS LOCAL FORWARD -4.2841 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.37384 1.58932 1.21260 1.40496 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 0.00000 * 1 2.43287 0.95742 2.50459 0.80603 1 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 2 0.13573 3.42814 2.83293 3.33438 2 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 3 0.13573 3.42814 2.83293 3.33438 3 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 4 0.13573 3.42814 2.83293 3.33438 4 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 5 3.13720 2.62601 3.18348 0.17104 5 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 6 3.48819 0.12383 3.53528 2.86892 6 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 7 3.13720 2.62601 3.18348 0.17104 7 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 8 3.13720 2.62601 3.18348 0.17104 8 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 9 1.17399 2.60648 0.63128 2.46315 9 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 10 2.98064 3.63611 0.11200 3.54585 10 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 11 3.48819 0.12383 3.53528 2.86892 11 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 12 2.98064 3.63611 0.11200 3.54585 12 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 13 2.98064 3.63611 0.11200 3.54585 13 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 14 3.13720 2.62601 3.18348 0.17104 14 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 15 2.98064 3.63611 0.11200 3.54585 15 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 16 2.98064 3.63611 0.11200 3.54585 16 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 17 0.13573 3.42814 2.83293 3.33438 17 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 18 3.13720 2.62601 3.18348 0.17104 18 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 19 3.48819 0.12383 3.53528 2.86892 19 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 20 0.13573 3.42814 2.83293 3.33438 20 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 21 3.48819 0.12383 3.53528 2.86892 21 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 22 3.13720 2.62601 3.18348 0.17104 22 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 23 3.48819 0.12383 3.53528 2.86892 23 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 24 2.98064 3.63611 0.11200 3.54585 24 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 25 2.98064 3.63611 0.11200 3.54585 25 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 26 3.13720 2.62601 3.18348 0.17104 26 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 27 3.13720 2.62601 3.18348 0.17104 27 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 28 3.48819 0.12383 3.53528 2.86892 28 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 29 2.98064 3.63611 0.11200 3.54585 29 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 30 3.13720 2.62601 3.18348 0.17104 30 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 31 2.98064 3.63611 0.11200 3.54585 31 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 32 2.98064 3.63611 0.11200 3.54585 32 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 33 0.13573 3.42814 2.83293 3.33438 33 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 34 3.13720 2.62601 3.18348 0.17104 34 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 35 3.48819 0.12383 3.53528 2.86892 35 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 36 2.98064 3.63611 0.11200 3.54585 36 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 37 0.13573 3.42814 2.83293 3.33438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 38 3.13720 2.62601 3.18348 0.17104 38 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 39 2.98064 3.63611 0.11200 3.54585 39 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 40 0.13573 3.42814 2.83293 3.33438 40 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 41 0.13573 3.42814 2.83293 3.33438 41 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 42 2.98064 3.63611 0.11200 3.54585 42 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 43 0.13573 3.42814 2.83293 3.33438 43 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 44 0.13573 3.42814 2.83293 3.33438 44 - - 1.38629 1.38629 1.38629 1.38629 0.03587 4.03884 4.03884 1.46634 0.26236 1.09861 0.40547 45 3.48819 0.12383 3.53528 2.86892 45 - - 1.38629 1.38629 1.38629 1.38629 0.01810 4.02107 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:21 2012 NSEQ 21 EFFN 3.811890 CKSUM 3684173544 STATS LOCAL MSV -7.2077 0.71932 STATS LOCAL VITERBI -7.7384 0.71932 STATS LOCAL FORWARD -4.3623 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40447 1.49377 1.24618 1.41726 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 0.00000 * 1 1.19857 2.20788 2.27181 0.72295 1 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 2 0.95279 1.38377 2.07939 1.43256 2 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 3 0.12420 3.52484 2.89516 3.44053 3 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 4 3.59878 0.11207 3.64093 2.94815 4 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 5 3.23702 2.68930 3.27941 0.15649 5 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 6 3.59878 0.11207 3.64093 2.94815 6 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 7 3.23702 2.68930 3.27941 0.15649 7 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 8 2.17429 2.46440 2.76572 0.30338 8 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 9 0.12420 3.52484 2.89516 3.44053 9 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 10 3.04591 3.73233 0.10249 3.65247 10 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 11 3.59878 0.11207 3.64093 2.94815 11 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 12 3.04591 3.73233 0.10249 3.65247 12 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 13 3.04591 3.73233 0.10249 3.65247 13 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 14 3.23702 2.68930 3.27941 0.15649 14 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 15 3.04591 3.73233 0.10249 3.65247 15 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 16 3.04591 3.73233 0.10249 3.65247 16 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 17 0.12420 3.52484 2.89516 3.44053 17 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 18 3.23702 2.68930 3.27941 0.15649 18 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 19 3.59878 0.11207 3.64093 2.94815 19 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 20 0.12420 3.52484 2.89516 3.44053 20 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 21 3.59878 0.11207 3.64093 2.94815 21 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 22 3.23702 2.68930 3.27941 0.15649 22 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 23 2.55962 1.24157 2.62790 0.57713 23 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 24 3.04591 3.73233 0.10249 3.65247 24 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 25 3.04591 3.73233 0.10249 3.65247 25 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 26 3.59878 0.11207 3.64093 2.94815 26 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 27 3.23702 2.68930 3.27941 0.15649 27 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 28 3.59878 0.11207 3.64093 2.94815 28 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 29 1.94837 3.11578 0.27045 2.99346 29 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 30 3.23702 2.68930 3.27941 0.15649 30 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 31 3.04591 3.73233 0.10249 3.65247 31 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 32 3.04591 3.73233 0.10249 3.65247 32 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 33 0.12420 3.52484 2.89516 3.44053 33 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 34 3.23702 2.68930 3.27941 0.15649 34 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 35 3.59878 0.11207 3.64093 2.94815 35 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 36 3.04591 3.73233 0.10249 3.65247 36 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 37 0.12420 3.52484 2.89516 3.44053 37 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 38 3.23702 2.68930 3.27941 0.15649 38 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 39 3.04591 3.73233 0.10249 3.65247 39 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 40 0.12420 3.52484 2.89516 3.44053 40 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 41 0.12420 3.52484 2.89516 3.44053 41 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 42 3.04591 3.73233 0.10249 3.65247 42 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 43 0.12420 3.52484 2.89516 3.44053 43 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 44 0.12420 3.52484 2.89516 3.44053 44 - - 1.38629 1.38629 1.38629 1.38629 0.03383 4.09632 4.09632 1.46634 0.26236 1.09861 0.40547 45 3.59878 0.11207 3.64093 2.94815 45 - - 1.38629 1.38629 1.38629 1.38629 0.01706 4.07955 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:25 2012 NSEQ 3 EFFN 3.000000 CKSUM 485987772 STATS LOCAL MSV -7.9007 0.72085 STATS LOCAL VITERBI -7.9323 0.72085 STATS LOCAL FORWARD -4.0009 0.72085 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.31900 1.60612 1.33370 1.31516 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 1.34853 2.58976 0.54705 2.44542 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 0.15719 3.27118 2.73043 3.16274 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:37 2012 NSEQ 62 EFFN 3.515503 CKSUM 970865132 STATS LOCAL MSV -7.4111 0.71932 STATS LOCAL VITERBI -7.8849 0.71932 STATS LOCAL FORWARD -4.2467 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34248 1.52639 1.35353 1.33501 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 0.00000 * 1 3.50187 0.12230 3.54836 2.87879 1 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 2 0.13425 3.44005 2.84062 3.34744 2 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 3 0.13425 3.44005 2.84062 3.34744 3 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 4 2.98879 3.64807 0.11077 3.55908 4 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 5 3.14938 2.63373 3.19519 0.16919 5 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 6 3.50187 0.12230 3.54836 2.87879 6 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 7 3.14938 2.63373 3.19519 0.16919 7 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 8 3.14938 2.63373 3.19519 0.16919 8 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 9 0.33003 2.89879 1.81100 2.77229 9 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 10 3.14938 2.63373 3.19519 0.16919 10 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 11 3.50187 0.12230 3.54836 2.87879 11 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 12 2.98879 3.64807 0.11077 3.55908 12 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 13 2.98879 3.64807 0.11077 3.55908 13 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 14 3.14938 2.63373 3.19519 0.16919 14 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 15 2.98879 3.64807 0.11077 3.55908 15 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 16 2.98879 3.64807 0.11077 3.55908 16 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 17 0.13425 3.44005 2.84062 3.34744 17 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 18 3.14938 2.63373 3.19519 0.16919 18 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 19 3.50187 0.12230 3.54836 2.87879 19 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 20 0.13425 3.44005 2.84062 3.34744 20 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 21 3.50187 0.12230 3.54836 2.87879 21 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 22 3.14938 2.63373 3.19519 0.16919 22 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 23 3.50187 0.12230 3.54836 2.87879 23 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 24 2.98879 3.64807 0.11077 3.55908 24 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 25 2.98879 3.64807 0.11077 3.55908 25 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 26 3.14938 2.63373 3.19519 0.16919 26 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 27 3.14938 2.63373 3.19519 0.16919 27 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 28 3.50187 0.12230 3.54836 2.87879 28 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 29 2.98879 3.64807 0.11077 3.55908 29 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 30 3.14938 2.63373 3.19519 0.16919 30 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 31 0.13425 3.44005 2.84062 3.34744 31 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 32 2.98879 3.64807 0.11077 3.55908 32 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 33 1.83933 2.10339 1.47710 0.71185 33 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 34 3.14938 2.63373 3.19519 0.16919 34 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 35 3.50187 0.12230 3.54836 2.87879 35 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 36 2.98879 3.64807 0.11077 3.55908 36 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 37 0.13425 3.44005 2.84062 3.34744 37 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 38 3.14938 2.63373 3.19519 0.16919 38 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 39 2.98879 3.64807 0.11077 3.55908 39 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 40 0.13425 3.44005 2.84062 3.34744 40 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 41 0.13425 3.44005 2.84062 3.34744 41 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 42 0.19556 3.22260 2.37017 3.11653 42 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 43 0.13425 3.44005 2.84062 3.34744 43 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 44 0.13425 3.44005 2.84062 3.34744 44 - - 1.38629 1.38629 1.38629 1.38629 0.03562 4.04577 4.04577 1.46634 0.26236 1.09861 0.40547 45 3.50187 0.12230 3.54836 2.87879 45 - - 1.38629 1.38629 1.38629 1.38629 0.01797 4.02812 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_foure_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:42 2012 NSEQ 2 EFFN 2.000000 CKSUM 2649644998 STATS LOCAL MSV -7.3985 0.72830 STATS LOCAL VITERBI -8.4341 0.72830 STATS LOCAL FORWARD -3.3435 0.72830 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23428 1.58647 1.42785 1.32997 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:47 2012 NSEQ 3 EFFN 3.000000 CKSUM 1198425551 STATS LOCAL MSV -8.1155 0.72049 STATS LOCAL VITERBI -8.0778 0.72049 STATS LOCAL FORWARD -4.1553 0.72049 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46416 1.79106 1.19266 1.20888 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:51 2012 NSEQ 5 EFFN 3.334961 CKSUM 284011394 STATS LOCAL MSV -8.1464 0.71932 STATS LOCAL VITERBI -7.7199 0.71932 STATS LOCAL FORWARD -4.2570 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39548 1.58131 1.18843 1.41931 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 * 1 3.43763 0.12967 3.48690 2.83229 1 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 2 0.14138 3.38419 2.80447 3.28622 2 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 3 0.14138 3.38419 2.80447 3.28622 3 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 4 2.95026 3.59174 0.11672 3.49682 4 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 5 3.09257 2.59766 3.14057 0.17804 5 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 6 3.09257 2.59766 3.14057 0.17804 6 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 7 0.14138 3.38419 2.80447 3.28622 7 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 8 3.09257 2.59766 3.14057 0.17804 8 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 9 2.95026 3.59174 0.11672 3.49682 9 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 10 3.09257 2.59766 3.14057 0.17804 10 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 11 3.43763 0.12967 3.48690 2.83229 11 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 12 2.95026 3.59174 0.11672 3.49682 12 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 13 2.95026 3.59174 0.11672 3.49682 13 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 14 2.43516 0.73703 2.50766 1.04291 14 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 15 2.95026 3.59174 0.11672 3.49682 15 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 16 0.14138 3.38419 2.80447 3.28622 16 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 17 0.14138 3.38419 2.80447 3.28622 17 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 18 3.09257 2.59766 3.14057 0.17804 18 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 19 3.43763 0.12967 3.48690 2.83229 19 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 20 0.14138 3.38419 2.80447 3.28622 20 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 21 3.43763 0.12967 3.48690 2.83229 21 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 22 3.09257 2.59766 3.14057 0.17804 22 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 23 3.09257 2.59766 3.14057 0.17804 23 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 24 2.95026 3.59174 0.11672 3.49682 24 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 25 2.95026 3.59174 0.11672 3.49682 25 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 26 3.43763 0.12967 3.48690 2.83229 26 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 27 3.09257 2.59766 3.14057 0.17804 27 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 28 3.43763 0.12967 3.48690 2.83229 28 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 29 2.95026 3.59174 0.11672 3.49682 29 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 30 3.09257 2.59766 3.14057 0.17804 30 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 31 2.95026 3.59174 0.11672 3.49682 31 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 32 2.95026 3.59174 0.11672 3.49682 32 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 33 2.95026 3.59174 0.11672 3.49682 33 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 34 3.09257 2.59766 3.14057 0.17804 34 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 35 3.43763 0.12967 3.48690 2.83229 35 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 36 2.95026 3.59174 0.11672 3.49682 36 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 37 0.14138 3.38419 2.80447 3.28622 37 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 38 3.09257 2.59766 3.14057 0.17804 38 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 39 2.95026 3.59174 0.11672 3.49682 39 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 40 0.14138 3.38419 2.80447 3.28622 40 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 41 0.14138 3.38419 2.80447 3.28622 41 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 42 2.95026 3.59174 0.11672 3.49682 42 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 43 0.14138 3.38419 2.80447 3.28622 43 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 44 0.14138 3.38419 2.80447 3.28622 44 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 45 3.43763 0.12967 3.48690 2.83229 45 - - 1.38629 1.38629 1.38629 1.38629 0.01857 3.99544 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:19:56 2012 NSEQ 4 EFFN 3.535156 CKSUM 2684874225 STATS LOCAL MSV -7.5664 0.71933 STATS LOCAL VITERBI -7.8243 0.71933 STATS LOCAL FORWARD -4.2092 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34147 1.61360 1.27975 1.34223 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 0.00000 * 1 0.96697 2.16989 2.18618 0.93335 1 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 2 0.13352 3.44594 2.84442 3.35389 2 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 3 0.13352 3.44594 2.84442 3.35389 3 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 4 2.99280 3.65396 0.11017 3.56561 4 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 5 3.15540 2.63755 3.20098 0.16828 5 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 6 3.15540 2.63755 3.20098 0.16828 6 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 7 0.85306 2.55020 0.90229 2.40593 7 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 8 3.50862 0.12155 3.55481 2.88365 8 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 9 3.15540 2.63755 3.20098 0.16828 9 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 10 3.15540 2.63755 3.20098 0.16828 10 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 11 3.50862 0.12155 3.55481 2.88365 11 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 12 2.99280 3.65396 0.11017 3.56561 12 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 13 2.99280 3.65396 0.11017 3.56561 13 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 14 3.15540 2.63755 3.20098 0.16828 14 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 15 2.99280 3.65396 0.11017 3.56561 15 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 16 2.99280 3.65396 0.11017 3.56561 16 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 17 0.13352 3.44594 2.84442 3.35389 17 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 18 3.15540 2.63755 3.20098 0.16828 18 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 19 3.50862 0.12155 3.55481 2.88365 19 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 20 0.13352 3.44594 2.84442 3.35389 20 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 21 3.50862 0.12155 3.55481 2.88365 21 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 22 3.15540 2.63755 3.20098 0.16828 22 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 23 3.15540 2.63755 3.20098 0.16828 23 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 24 2.99280 3.65396 0.11017 3.56561 24 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 25 2.99280 3.65396 0.11017 3.56561 25 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 26 3.15540 2.63755 3.20098 0.16828 26 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 27 3.15540 2.63755 3.20098 0.16828 27 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 28 3.50862 0.12155 3.55481 2.88365 28 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 29 0.13352 3.44594 2.84442 3.35389 29 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 30 3.50862 0.12155 3.55481 2.88365 30 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 31 2.99280 3.65396 0.11017 3.56561 31 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 32 2.99280 3.65396 0.11017 3.56561 32 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 33 2.99280 3.65396 0.11017 3.56561 33 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 34 3.15540 2.63755 3.20098 0.16828 34 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 35 3.50862 0.12155 3.55481 2.88365 35 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 36 2.99280 3.65396 0.11017 3.56561 36 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 37 0.13352 3.44594 2.84442 3.35389 37 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 38 3.15540 2.63755 3.20098 0.16828 38 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 39 2.99280 3.65396 0.11017 3.56561 39 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 40 0.13352 3.44594 2.84442 3.35389 40 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 41 0.13352 3.44594 2.84442 3.35389 41 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 42 0.13352 3.44594 2.84442 3.35389 42 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 43 0.13352 3.44594 2.84442 3.35389 43 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 44 0.13352 3.44594 2.84442 3.35389 44 - - 1.38629 1.38629 1.38629 1.38629 0.03550 4.04920 4.04920 1.46634 0.26236 1.09861 0.40547 45 3.50862 0.12155 3.55481 2.88365 45 - - 1.38629 1.38629 1.38629 1.38629 0.01791 4.03161 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fouri_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:00 2012 NSEQ 4 EFFN 3.207031 CKSUM 860438363 STATS LOCAL MSV -8.0999 0.71933 STATS LOCAL VITERBI -7.9356 0.71933 STATS LOCAL FORWARD -4.2503 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39743 1.54380 1.19256 1.44495 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 0.00000 * 1 0.14698 3.34251 2.77733 3.24063 1 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 2 0.14698 3.34251 2.77733 3.24063 2 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 3 0.14698 3.34251 2.77733 3.24063 3 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 4 2.92101 3.54931 0.12145 3.45003 4 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 5 3.05066 2.57097 3.10026 0.18492 5 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 6 3.05066 2.57097 3.10026 0.18492 6 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 7 2.92101 3.54931 0.12145 3.45003 7 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 8 3.38956 0.13553 3.44084 2.79718 8 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 9 3.05066 2.57097 3.10026 0.18492 9 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 10 3.05066 2.57097 3.10026 0.18492 10 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 11 3.38956 0.13553 3.44084 2.79718 11 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 12 2.92101 3.54931 0.12145 3.45003 12 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 13 2.92101 3.54931 0.12145 3.45003 13 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 14 3.05066 2.57097 3.10026 0.18492 14 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 15 2.92101 3.54931 0.12145 3.45003 15 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 16 2.92101 3.54931 0.12145 3.45003 16 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 17 0.14698 3.34251 2.77733 3.24063 17 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 18 3.05066 2.57097 3.10026 0.18492 18 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 19 3.38956 0.13553 3.44084 2.79718 19 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 20 0.14698 3.34251 2.77733 3.24063 20 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 21 3.38956 0.13553 3.44084 2.79718 21 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 22 3.05066 2.57097 3.10026 0.18492 22 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 23 3.38956 0.13553 3.44084 2.79718 23 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 24 2.92101 3.54931 0.12145 3.45003 24 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 25 2.92101 3.54931 0.12145 3.45003 25 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 26 3.05066 2.57097 3.10026 0.18492 26 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 27 3.05066 2.57097 3.10026 0.18492 27 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 28 3.38956 0.13553 3.44084 2.79718 28 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 29 2.92101 3.54931 0.12145 3.45003 29 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 30 3.38956 0.13553 3.44084 2.79718 30 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 31 2.92101 3.54931 0.12145 3.45003 31 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 32 2.92101 3.54931 0.12145 3.45003 32 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 33 2.92101 3.54931 0.12145 3.45003 33 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 34 3.05066 2.57097 3.10026 0.18492 34 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 35 3.38956 0.13553 3.44084 2.79718 35 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 36 2.92101 3.54931 0.12145 3.45003 36 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 37 0.14698 3.34251 2.77733 3.24063 37 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 38 3.05066 2.57097 3.10026 0.18492 38 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 39 2.92101 3.54931 0.12145 3.45003 39 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 40 0.14698 3.34251 2.77733 3.24063 40 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 41 0.14698 3.34251 2.77733 3.24063 41 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 42 0.14698 3.34251 2.77733 3.24063 42 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 43 0.14698 3.34251 2.77733 3.24063 43 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 44 0.14698 3.34251 2.77733 3.24063 44 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99029 3.99029 1.46634 0.26236 1.09861 0.40547 45 3.38956 0.13553 3.44084 2.79718 45 - - 1.38629 1.38629 1.38629 1.38629 0.01902 3.97162 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:06 2012 NSEQ 17 EFFN 3.266357 CKSUM 4174304823 STATS LOCAL MSV -8.1085 0.71932 STATS LOCAL VITERBI -7.9322 0.71932 STATS LOCAL FORWARD -3.9676 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34496 1.46661 1.24888 1.50544 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 0.00000 * 1 0.32672 2.69881 2.46028 2.07132 1 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 2 0.14432 3.36206 2.79008 3.26201 2 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 3 0.14432 3.36206 2.79008 3.26201 3 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 4 2.93479 3.56925 0.11920 3.47201 4 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 5 3.07027 2.58347 3.11913 0.18166 5 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 6 3.07027 2.58347 3.11913 0.18166 6 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 7 0.14432 3.36206 2.79008 3.26201 7 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 8 3.41212 0.13274 3.46246 2.81369 8 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 9 3.07027 2.58347 3.11913 0.18166 9 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 10 3.41212 0.13274 3.46246 2.81369 10 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 11 3.41212 0.13274 3.46246 2.81369 11 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 12 2.93479 3.56925 0.11920 3.47201 12 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 13 2.93479 3.56925 0.11920 3.47201 13 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 14 3.07027 2.58347 3.11913 0.18166 14 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 15 2.93479 3.56925 0.11920 3.47201 15 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 16 2.93479 3.56925 0.11920 3.47201 16 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 17 0.14432 3.36206 2.79008 3.26201 17 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 18 3.07027 2.58347 3.11913 0.18166 18 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 19 3.41212 0.13274 3.46246 2.81369 19 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 20 0.14432 3.36206 2.79008 3.26201 20 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 21 3.41212 0.13274 3.46246 2.81369 21 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 22 3.07027 2.58347 3.11913 0.18166 22 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 23 3.41212 0.13274 3.46246 2.81369 23 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 24 2.93479 3.56925 0.11920 3.47201 24 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 25 2.93479 3.56925 0.11920 3.47201 25 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 26 3.07027 2.58347 3.11913 0.18166 26 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 27 3.07027 2.58347 3.11913 0.18166 27 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 28 3.41212 0.13274 3.46246 2.81369 28 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 29 2.93479 3.56925 0.11920 3.47201 29 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 30 3.41212 0.13274 3.46246 2.81369 30 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 31 2.93479 3.56925 0.11920 3.47201 31 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 32 2.93479 3.56925 0.11920 3.47201 32 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 33 2.93479 3.56925 0.11920 3.47201 33 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 34 3.07027 2.58347 3.11913 0.18166 34 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 35 3.41212 0.13274 3.46246 2.81369 35 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 36 2.93479 3.56925 0.11920 3.47201 36 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 37 0.14432 3.36206 2.79008 3.26201 37 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 38 3.07027 2.58347 3.11913 0.18166 38 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 39 2.93479 3.56925 0.11920 3.47201 39 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 40 0.14432 3.36206 2.79008 3.26201 40 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 41 0.14432 3.36206 2.79008 3.26201 41 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 42 0.14432 3.36206 2.79008 3.26201 42 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 43 0.14432 3.36206 2.79008 3.26201 43 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 44 0.14432 3.36206 2.79008 3.26201 44 - - 1.38629 1.38629 1.38629 1.38629 0.03727 4.00120 4.00120 1.46634 0.26236 1.09861 0.40547 45 3.41212 0.13274 3.46246 2.81369 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98273 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourk_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:12 2012 NSEQ 2 EFFN 2.000000 CKSUM 230231236 STATS LOCAL MSV -7.4638 0.72773 STATS LOCAL VITERBI -8.4182 0.72773 STATS LOCAL FORWARD -3.5515 0.72773 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39335 1.53233 1.20977 1.43776 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourl_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:17 2012 NSEQ 18 EFFN 3.730957 CKSUM 2863177216 STATS LOCAL MSV -7.0840 0.71932 STATS LOCAL VITERBI -7.7169 0.71932 STATS LOCAL FORWARD -4.0032 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.42749 1.45323 1.23415 1.44734 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 0.00000 * 1 2.80260 1.78176 2.86243 0.33705 1 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 2 0.12676 3.50250 2.88081 3.41598 2 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 3 0.12676 3.50250 2.88081 3.41598 3 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 4 3.03100 3.71027 0.10459 3.62800 4 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 5 3.21376 2.67455 3.25706 0.15975 5 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 6 3.21376 2.67455 3.25706 0.15975 6 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 7 0.12676 3.50250 2.88081 3.41598 7 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 8 3.57332 0.11466 3.61663 2.93001 8 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 9 3.21376 2.67455 3.25706 0.15975 9 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 10 3.57332 0.11466 3.61663 2.93001 10 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 11 3.57332 0.11466 3.61663 2.93001 11 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 12 3.03100 3.71027 0.10459 3.62800 12 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 13 3.03100 3.71027 0.10459 3.62800 13 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 14 3.21376 2.67455 3.25706 0.15975 14 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 15 3.03100 3.71027 0.10459 3.62800 15 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 16 3.03100 3.71027 0.10459 3.62800 16 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 17 0.12676 3.50250 2.88081 3.41598 17 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 18 2.90492 1.97839 2.96091 0.28080 18 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 19 3.57332 0.11466 3.61663 2.93001 19 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 20 0.12676 3.50250 2.88081 3.41598 20 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 21 3.57332 0.11466 3.61663 2.93001 21 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 22 3.21376 2.67455 3.25706 0.15975 22 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 23 2.90492 1.97839 2.96091 0.28080 23 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 24 3.03100 3.71027 0.10459 3.62800 24 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 25 3.03100 3.71027 0.10459 3.62800 25 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 26 3.07718 0.24256 3.13733 2.07228 26 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 27 3.21376 2.67455 3.25706 0.15975 27 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 28 3.27023 0.18298 3.32440 2.37277 28 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 29 1.95975 3.10588 0.26960 2.98307 29 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 30 3.57332 0.11466 3.61663 2.93001 30 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 31 3.03100 3.71027 0.10459 3.62800 31 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 32 3.03100 3.71027 0.10459 3.62800 32 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 33 2.76500 3.19127 0.19589 2.60634 33 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 34 3.21376 2.67455 3.25706 0.15975 34 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 35 3.57332 0.11466 3.61663 2.93001 35 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 36 3.03100 3.71027 0.10459 3.62800 36 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 37 0.12676 3.50250 2.88081 3.41598 37 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 38 3.21376 2.67455 3.25706 0.15975 38 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 39 3.03100 3.71027 0.10459 3.62800 39 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 40 0.12676 3.50250 2.88081 3.41598 40 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 41 0.12676 3.50250 2.88081 3.41598 41 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 42 0.90738 2.58515 0.83466 2.44170 42 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 43 0.12676 3.50250 2.88081 3.41598 43 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 44 0.12676 3.50250 2.88081 3.41598 44 - - 1.38629 1.38629 1.38629 1.38629 0.03430 4.08277 4.08277 1.46634 0.26236 1.09861 0.40547 45 3.57332 0.11466 3.61663 2.93001 45 - - 1.38629 1.38629 1.38629 1.38629 0.01730 4.06577 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourm_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:22 2012 NSEQ 9 EFFN 3.555176 CKSUM 2524060174 STATS LOCAL MSV -7.4231 0.71932 STATS LOCAL VITERBI -7.5972 0.71932 STATS LOCAL FORWARD -4.3998 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28371 1.60225 1.29933 1.39096 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 0.00000 * 1 1.07668 2.16651 2.20381 0.83398 1 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 2 0.92278 1.50243 2.05951 1.37641 2 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 3 0.13279 3.45189 2.84825 3.36042 3 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 4 2.99686 3.65992 0.10956 3.57220 4 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 5 3.51544 0.12080 3.56134 2.88856 5 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 6 3.16150 2.64143 3.20685 0.16736 6 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 7 0.13279 3.45189 2.84825 3.36042 7 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 8 3.16150 2.64143 3.20685 0.16736 8 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 9 0.13279 3.45189 2.84825 3.36042 9 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 10 3.16150 2.64143 3.20685 0.16736 10 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 11 3.51544 0.12080 3.56134 2.88856 11 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 12 2.99686 3.65992 0.10956 3.57220 12 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 13 2.99686 3.65992 0.10956 3.57220 13 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 14 3.16150 2.64143 3.20685 0.16736 14 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 15 2.99686 3.65992 0.10956 3.57220 15 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 16 2.99686 3.65992 0.10956 3.57220 16 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 17 0.13279 3.45189 2.84825 3.36042 17 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 18 3.16150 2.64143 3.20685 0.16736 18 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 19 3.51544 0.12080 3.56134 2.88856 19 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 20 0.13279 3.45189 2.84825 3.36042 20 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 21 3.51544 0.12080 3.56134 2.88856 21 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 22 3.16150 2.64143 3.20685 0.16736 22 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 23 3.16150 2.64143 3.20685 0.16736 23 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 24 2.99686 3.65992 0.10956 3.57220 24 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 25 2.99686 3.65992 0.10956 3.57220 25 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 26 3.51544 0.12080 3.56134 2.88856 26 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 27 3.16150 2.64143 3.20685 0.16736 27 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 28 3.51544 0.12080 3.56134 2.88856 28 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 29 2.99686 3.65992 0.10956 3.57220 29 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 30 3.16150 2.64143 3.20685 0.16736 30 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 31 0.13279 3.45189 2.84825 3.36042 31 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 32 2.99686 3.65992 0.10956 3.57220 32 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 33 0.13279 3.45189 2.84825 3.36042 33 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 34 3.16150 2.64143 3.20685 0.16736 34 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 35 3.51544 0.12080 3.56134 2.88856 35 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 36 2.99686 3.65992 0.10956 3.57220 36 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 37 0.13279 3.45189 2.84825 3.36042 37 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 38 3.16150 2.64143 3.20685 0.16736 38 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 39 2.99686 3.65992 0.10956 3.57220 39 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 40 0.13279 3.45189 2.84825 3.36042 40 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 41 0.13279 3.45189 2.84825 3.36042 41 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 42 2.99686 3.65992 0.10956 3.57220 42 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 43 0.13279 3.45189 2.84825 3.36042 43 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 44 0.13279 3.45189 2.84825 3.36042 44 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 45 3.51544 0.12080 3.56134 2.88856 45 - - 1.38629 1.38629 1.38629 1.38629 0.01784 4.03516 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:54 2012 NSEQ 4 EFFN 3.199219 CKSUM 535846906 STATS LOCAL MSV -8.1777 0.71932 STATS LOCAL VITERBI -7.7998 0.71932 STATS LOCAL FORWARD -4.0096 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33545 1.46596 1.25158 1.51390 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 * 1 3.38655 0.13590 3.43796 2.79498 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 2 0.14734 3.33991 2.77563 3.23778 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 3 0.14734 3.33991 2.77563 3.23778 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 4 3.38655 0.13590 3.43796 2.79498 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 5 0.14734 3.33991 2.77563 3.23778 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 6 3.38655 0.13590 3.43796 2.79498 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 7 3.04806 2.56931 3.09775 0.18535 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 8 3.04806 2.56931 3.09775 0.18535 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 9 3.04806 2.56931 3.09775 0.18535 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 10 0.14734 3.33991 2.77563 3.23778 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 11 3.38655 0.13590 3.43796 2.79498 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 12 0.14734 3.33991 2.77563 3.23778 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 13 2.91917 3.54665 0.12176 3.44709 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 14 3.04806 2.56931 3.09775 0.18535 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 15 2.91917 3.54665 0.12176 3.44709 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 16 2.91917 3.54665 0.12176 3.44709 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 17 0.14734 3.33991 2.77563 3.23778 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 18 3.04806 2.56931 3.09775 0.18535 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 19 3.38655 0.13590 3.43796 2.79498 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 20 0.14734 3.33991 2.77563 3.23778 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 21 3.38655 0.13590 3.43796 2.79498 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 22 3.04806 2.56931 3.09775 0.18535 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 23 3.04806 2.56931 3.09775 0.18535 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 24 2.91917 3.54665 0.12176 3.44709 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 25 2.91917 3.54665 0.12176 3.44709 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 26 3.38655 0.13590 3.43796 2.79498 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 27 3.04806 2.56931 3.09775 0.18535 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 28 3.38655 0.13590 3.43796 2.79498 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 29 2.91917 3.54665 0.12176 3.44709 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 30 2.91917 3.54665 0.12176 3.44709 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 31 2.91917 3.54665 0.12176 3.44709 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 32 2.91917 3.54665 0.12176 3.44709 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 33 2.91917 3.54665 0.12176 3.44709 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 34 3.04806 2.56931 3.09775 0.18535 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 35 3.38655 0.13590 3.43796 2.79498 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 36 2.91917 3.54665 0.12176 3.44709 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 37 0.14734 3.33991 2.77563 3.23778 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 38 3.04806 2.56931 3.09775 0.18535 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 39 2.91917 3.54665 0.12176 3.44709 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 40 0.14734 3.33991 2.77563 3.23778 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 41 0.14734 3.33991 2.77563 3.23778 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 42 2.91917 3.54665 0.12176 3.44709 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 43 0.14734 3.33991 2.77563 3.23778 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 44 0.14734 3.33991 2.77563 3.23778 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 45 3.38655 0.13590 3.43796 2.79498 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97014 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:01 2012 NSEQ 23 EFFN 3.501099 CKSUM 1811260558 STATS LOCAL MSV -7.4154 0.71931 STATS LOCAL VITERBI -7.7564 0.71931 STATS LOCAL FORWARD -4.2320 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.31292 1.46337 1.22855 1.57601 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 0.00000 * 1 0.45522 2.71836 1.49555 2.58254 1 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 2 0.27722 2.84765 2.55637 2.23921 2 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 3 0.13479 3.43572 2.83783 3.34269 3 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 4 3.14494 2.63092 3.19093 0.16986 4 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 5 3.49690 0.12285 3.54360 2.87520 5 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 6 3.49690 0.12285 3.54360 2.87520 6 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 7 3.14494 2.63092 3.19093 0.16986 7 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 8 0.29235 2.97047 1.93614 2.84810 8 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 9 0.28945 2.97664 1.94643 2.85464 9 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 10 0.13479 3.43572 2.83783 3.34269 10 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 11 3.49690 0.12285 3.54360 2.87520 11 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 12 2.98583 3.64372 0.11122 3.55427 12 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 13 2.98583 3.64372 0.11122 3.55427 13 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 14 3.14494 2.63092 3.19093 0.16986 14 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 15 2.98583 3.64372 0.11122 3.55427 15 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 16 2.98583 3.64372 0.11122 3.55427 16 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 17 0.13479 3.43572 2.83783 3.34269 17 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 18 3.14494 2.63092 3.19093 0.16986 18 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 19 3.49690 0.12285 3.54360 2.87520 19 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 20 0.13479 3.43572 2.83783 3.34269 20 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 21 3.49690 0.12285 3.54360 2.87520 21 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 22 3.14494 2.63092 3.19093 0.16986 22 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 23 3.49690 0.12285 3.54360 2.87520 23 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 24 2.98583 3.64372 0.11122 3.55427 24 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 25 2.98583 3.64372 0.11122 3.55427 25 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 26 3.49690 0.12285 3.54360 2.87520 26 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 27 3.14494 2.63092 3.19093 0.16986 27 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 28 3.49690 0.12285 3.54360 2.87520 28 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 29 2.98583 3.64372 0.11122 3.55427 29 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 30 3.14494 2.63092 3.19093 0.16986 30 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 31 2.98583 3.64372 0.11122 3.55427 31 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 32 2.98583 3.64372 0.11122 3.55427 32 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 33 0.13479 3.43572 2.83783 3.34269 33 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 34 3.14494 2.63092 3.19093 0.16986 34 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 35 3.49690 0.12285 3.54360 2.87520 35 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 36 2.98583 3.64372 0.11122 3.55427 36 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 37 0.13479 3.43572 2.83783 3.34269 37 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 38 3.14494 2.63092 3.19093 0.16986 38 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 39 2.98583 3.64372 0.11122 3.55427 39 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 40 0.13479 3.43572 2.83783 3.34269 40 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 41 0.13479 3.43572 2.83783 3.34269 41 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 42 2.98583 3.64372 0.11122 3.55427 42 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 43 2.34521 3.30668 0.19044 3.19570 43 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 44 0.13479 3.43572 2.83783 3.34269 44 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04324 4.04324 1.46634 0.26236 1.09861 0.40547 45 3.49690 0.12285 3.54360 2.87520 45 - - 1.38629 1.38629 1.38629 1.38629 0.01801 4.02555 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:00 2012 NSEQ 2 EFFN 2.000000 CKSUM 209311102 STATS LOCAL MSV -7.6229 0.72769 STATS LOCAL VITERBI -8.1432 0.72769 STATS LOCAL FORWARD -3.4224 0.72769 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39541 1.40602 1.26392 1.49340 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:11:25 2012 NSEQ 2 EFFN 2.000000 CKSUM 3686762380 STATS LOCAL MSV -7.5082 0.72766 STATS LOCAL VITERBI -8.2855 0.72766 STATS LOCAL FORWARD -3.8286 0.72766 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58214 1.52906 1.11769 1.38354 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:11:33 2012 NSEQ 87 EFFN 3.655975 CKSUM 3510333141 STATS LOCAL MSV -7.4198 0.71932 STATS LOCAL VITERBI -7.6938 0.71932 STATS LOCAL FORWARD -4.3590 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54954 1.45282 1.13873 1.45449 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 0.00000 * 1 3.54908 0.11719 3.59347 2.91269 1 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 2 0.12925 3.48127 2.86717 3.39267 2 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 3 0.12925 3.48127 2.86717 3.39267 3 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 4 3.54908 0.11719 3.59347 2.91269 4 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 5 3.19176 2.66061 3.23592 0.16291 5 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 6 2.47923 0.76813 2.55103 0.98267 6 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 7 3.19176 2.66061 3.23592 0.16291 7 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 8 2.07585 3.16738 0.24209 3.04801 8 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 9 0.36015 2.66492 2.46116 1.91401 9 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 10 2.57159 3.47632 0.15254 3.37730 10 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 11 3.54908 0.11719 3.59347 2.91269 11 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 12 3.01675 3.68922 0.10664 3.60465 12 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 13 3.01675 3.68922 0.10664 3.60465 13 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 14 3.19176 2.66061 3.23592 0.16291 14 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 15 3.01675 3.68922 0.10664 3.60465 15 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 16 3.01675 3.68922 0.10664 3.60465 16 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 17 0.12925 3.48127 2.86717 3.39267 17 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 18 3.19176 2.66061 3.23592 0.16291 18 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 19 3.54908 0.11719 3.59347 2.91269 19 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 20 0.12925 3.48127 2.86717 3.39267 20 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 21 3.54908 0.11719 3.59347 2.91269 21 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 22 3.19176 2.66061 3.23592 0.16291 22 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 23 3.54908 0.11719 3.59347 2.91269 23 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 24 3.01675 3.68922 0.10664 3.60465 24 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 25 3.01675 3.68922 0.10664 3.60465 25 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 26 3.54908 0.11719 3.59347 2.91269 26 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 27 3.19176 2.66061 3.23592 0.16291 27 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 28 3.54908 0.11719 3.59347 2.91269 28 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 29 3.01675 3.68922 0.10664 3.60465 29 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 30 3.19176 2.66061 3.23592 0.16291 30 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 31 3.01675 3.68922 0.10664 3.60465 31 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 32 2.93056 2.06431 2.98531 0.26240 32 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 33 3.01675 3.68922 0.10664 3.60465 33 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 34 3.19176 2.66061 3.23592 0.16291 34 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 35 3.54908 0.11719 3.59347 2.91269 35 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 36 3.01675 3.68922 0.10664 3.60465 36 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 37 0.12925 3.48127 2.86717 3.39267 37 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 38 3.19176 2.66061 3.23592 0.16291 38 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 39 3.01675 3.68922 0.10664 3.60465 39 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 40 0.12925 3.48127 2.86717 3.39267 40 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 41 0.12925 3.48127 2.86717 3.39267 41 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 42 3.01675 3.68922 0.10664 3.60465 42 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 43 0.12925 3.48127 2.86717 3.39267 43 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 44 3.01675 3.68922 0.10664 3.60465 44 - - 1.38629 1.38629 1.38629 1.38629 0.03475 4.07005 4.07005 1.46634 0.26236 1.09861 0.40547 45 2.51322 0.66750 2.58481 1.10686 45 - - 1.38629 1.38629 1.38629 1.38629 0.01753 4.05282 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:11:44 2012 NSEQ 10 EFFN 3.227539 CKSUM 1757016814 STATS LOCAL MSV -7.9412 0.71930 STATS LOCAL VITERBI -7.6707 0.71930 STATS LOCAL FORWARD -4.0766 0.71930 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40323 1.39009 1.31591 1.44005 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 0.00000 * 1 3.39741 0.13455 3.44837 2.80294 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 2 0.14605 3.34931 2.78177 3.24806 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 3 0.14605 3.34931 2.78177 3.24806 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 4 3.39741 0.13455 3.44837 2.80294 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 5 3.05748 2.57532 3.10682 0.18378 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 6 3.39741 0.13455 3.44837 2.80294 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 7 3.39741 0.13455 3.44837 2.80294 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 8 0.14605 3.34931 2.78177 3.24806 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 9 3.05748 2.57532 3.10682 0.18378 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 10 2.92582 3.55626 0.12066 3.45768 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 11 3.05748 2.57532 3.10682 0.18378 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 12 2.92582 3.55626 0.12066 3.45768 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 13 2.92582 3.55626 0.12066 3.45768 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 14 3.05748 2.57532 3.10682 0.18378 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 15 2.92582 3.55626 0.12066 3.45768 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 16 2.92582 3.55626 0.12066 3.45768 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 17 0.14605 3.34931 2.78177 3.24806 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 18 3.05748 2.57532 3.10682 0.18378 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 19 3.39741 0.13455 3.44837 2.80294 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 20 0.14605 3.34931 2.78177 3.24806 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 21 3.39741 0.13455 3.44837 2.80294 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 22 3.05748 2.57532 3.10682 0.18378 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 23 3.39741 0.13455 3.44837 2.80294 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 24 2.92582 3.55626 0.12066 3.45768 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 25 2.92582 3.55626 0.12066 3.45768 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 26 3.39741 0.13455 3.44837 2.80294 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 27 3.05748 2.57532 3.10682 0.18378 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 28 3.39741 0.13455 3.44837 2.80294 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 29 0.14605 3.34931 2.78177 3.24806 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 30 3.39741 0.13455 3.44837 2.80294 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 31 2.92582 3.55626 0.12066 3.45768 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 32 3.05748 2.57532 3.10682 0.18378 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 33 0.14605 3.34931 2.78177 3.24806 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 34 3.05748 2.57532 3.10682 0.18378 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 35 3.39741 0.13455 3.44837 2.80294 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 36 2.92582 3.55626 0.12066 3.45768 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 37 0.14605 3.34931 2.78177 3.24806 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 38 3.05748 2.57532 3.10682 0.18378 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 39 2.92582 3.55626 0.12066 3.45768 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 40 0.14605 3.34931 2.78177 3.24806 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 41 0.14605 3.34931 2.78177 3.24806 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 42 2.92582 3.55626 0.12066 3.45768 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 43 0.14605 3.34931 2.78177 3.24806 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 44 2.92582 3.55626 0.12066 3.45768 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 45 3.05748 2.57532 3.10682 0.18378 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97547 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:11:50 2012 NSEQ 17 EFFN 3.291260 CKSUM 196763882 STATS LOCAL MSV -8.0536 0.71933 STATS LOCAL VITERBI -7.7352 0.71933 STATS LOCAL FORWARD -3.8207 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38860 1.39070 1.27186 1.50794 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 0.00000 * 1 3.42145 0.13161 3.47140 2.82050 1 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 2 0.14324 3.37015 2.79535 3.27086 2 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 3 0.14324 3.37015 2.79535 3.27086 3 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 4 3.42145 0.13161 3.47140 2.82050 4 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 5 3.07841 2.58865 3.12696 0.18033 5 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 6 3.42145 0.13161 3.47140 2.82050 6 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 7 3.42145 0.13161 3.47140 2.82050 7 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 8 0.14324 3.37015 2.79535 3.27086 8 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 9 3.07841 2.58865 3.12696 0.18033 9 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 10 2.94046 3.57748 0.11829 3.48109 10 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 11 3.07841 2.58865 3.12696 0.18033 11 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 12 2.94046 3.57748 0.11829 3.48109 12 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 13 2.94046 3.57748 0.11829 3.48109 13 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 14 3.07841 2.58865 3.12696 0.18033 14 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 15 2.94046 3.57748 0.11829 3.48109 15 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 16 2.94046 3.57748 0.11829 3.48109 16 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 17 0.14324 3.37015 2.79535 3.27086 17 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 18 3.07841 2.58865 3.12696 0.18033 18 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 19 3.42145 0.13161 3.47140 2.82050 19 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 20 0.14324 3.37015 2.79535 3.27086 20 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 21 3.42145 0.13161 3.47140 2.82050 21 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 22 3.07841 2.58865 3.12696 0.18033 22 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 23 3.42145 0.13161 3.47140 2.82050 23 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 24 2.94046 3.57748 0.11829 3.48109 24 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 25 2.94046 3.57748 0.11829 3.48109 25 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 26 3.42145 0.13161 3.47140 2.82050 26 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 27 3.07841 2.58865 3.12696 0.18033 27 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 28 3.42145 0.13161 3.47140 2.82050 28 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 29 0.14324 3.37015 2.79535 3.27086 29 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 30 3.42145 0.13161 3.47140 2.82050 30 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 31 2.94046 3.57748 0.11829 3.48109 31 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 32 3.07841 2.58865 3.12696 0.18033 32 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 33 1.49206 2.71976 0.45663 2.57989 33 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 34 0.14324 3.37015 2.79535 3.27086 34 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 35 3.42145 0.13161 3.47140 2.82050 35 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 36 2.94046 3.57748 0.11829 3.48109 36 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 37 0.14324 3.37015 2.79535 3.27086 37 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 38 3.07841 2.58865 3.12696 0.18033 38 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 39 2.94046 3.57748 0.11829 3.48109 39 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 40 0.14324 3.37015 2.79535 3.27086 40 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 41 0.14324 3.37015 2.79535 3.27086 41 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 42 2.94046 3.57748 0.11829 3.48109 42 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 43 0.14324 3.37015 2.79535 3.27086 43 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 44 2.94046 3.57748 0.11829 3.48109 44 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00574 4.00574 1.46634 0.26236 1.09861 0.40547 45 3.07841 2.58865 3.12696 0.18033 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98736 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:11:59 2012 NSEQ 34 EFFN 3.482178 CKSUM 4148185765 STATS LOCAL MSV -7.2926 0.71932 STATS LOCAL VITERBI -7.6395 0.71932 STATS LOCAL FORWARD -4.1414 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39466 1.43022 1.30565 1.41953 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 0.00000 * 1 3.22523 0.18506 3.28084 2.39033 1 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 2 0.13550 3.42999 2.83413 3.33641 2 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 3 0.13550 3.42999 2.83413 3.33641 3 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 4 3.49032 0.12359 3.53732 2.87046 4 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 5 3.13909 2.62721 3.18530 0.17075 5 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 6 2.40864 0.46941 2.12525 1.80006 6 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 7 2.74277 0.38496 2.81075 1.63490 7 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 8 0.13550 3.42999 2.83413 3.33641 8 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 9 3.13909 2.62721 3.18530 0.17075 9 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 10 2.98191 3.63797 0.11181 3.54791 10 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 11 3.13909 2.62721 3.18530 0.17075 11 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 12 2.98191 3.63797 0.11181 3.54791 12 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 13 2.98191 3.63797 0.11181 3.54791 13 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 14 3.13909 2.62721 3.18530 0.17075 14 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 15 2.98191 3.63797 0.11181 3.54791 15 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 16 2.98191 3.63797 0.11181 3.54791 16 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 17 0.13550 3.42999 2.83413 3.33641 17 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 18 3.13909 2.62721 3.18530 0.17075 18 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 19 3.49032 0.12359 3.53732 2.87046 19 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 20 0.13550 3.42999 2.83413 3.33641 20 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 21 3.49032 0.12359 3.53732 2.87046 21 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 22 3.13909 2.62721 3.18530 0.17075 22 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 23 3.49032 0.12359 3.53732 2.87046 23 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 24 2.98191 3.63797 0.11181 3.54791 24 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 25 2.98191 3.63797 0.11181 3.54791 25 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 26 3.49032 0.12359 3.53732 2.87046 26 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 27 3.13909 2.62721 3.18530 0.17075 27 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 28 3.49032 0.12359 3.53732 2.87046 28 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 29 0.13550 3.42999 2.83413 3.33641 29 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 30 3.49032 0.12359 3.53732 2.87046 30 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 31 2.98191 3.63797 0.11181 3.54791 31 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 32 2.96850 2.22834 3.02126 0.23298 32 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 33 0.13550 3.42999 2.83413 3.33641 33 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 34 3.13909 2.62721 3.18530 0.17075 34 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 35 3.49032 0.12359 3.53732 2.87046 35 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 36 2.98191 3.63797 0.11181 3.54791 36 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 37 0.13550 3.42999 2.83413 3.33641 37 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 38 3.13909 2.62721 3.18530 0.17075 38 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 39 2.98191 3.63797 0.11181 3.54791 39 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 40 0.13550 3.42999 2.83413 3.33641 40 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 41 0.13550 3.42999 2.83413 3.33641 41 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 42 2.98191 3.63797 0.11181 3.54791 42 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 43 0.13550 3.42999 2.83413 3.33641 43 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 44 2.98191 3.63797 0.11181 3.54791 44 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 45 3.13909 2.62721 3.18530 0.17075 45 - - 1.38629 1.38629 1.38629 1.38629 0.01808 4.02216 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:05 2012 NSEQ 2 EFFN 2.000000 CKSUM 2429089339 STATS LOCAL MSV -7.4875 0.72740 STATS LOCAL VITERBI -8.1144 0.72740 STATS LOCAL FORWARD -3.7271 0.72740 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51972 1.35153 1.16664 1.55604 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oneg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:20 2012 NSEQ 3 EFFN 3.000000 CKSUM 3162836829 STATS LOCAL MSV -8.0248 0.72040 STATS LOCAL VITERBI -7.6955 0.72040 STATS LOCAL FORWARD -4.0851 0.72040 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22259 1.32320 1.60338 1.43533 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.15719 3.27118 2.73043 3.16274 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oneh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:26 2012 NSEQ 68 EFFN 3.332764 CKSUM 148303286 STATS LOCAL MSV -8.0502 0.71933 STATS LOCAL VITERBI -7.6972 0.71933 STATS LOCAL FORWARD -4.3500 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47373 1.32059 1.25656 1.51722 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 0.00000 * 1 3.43682 0.12977 3.48612 2.83170 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 2 0.14147 3.38348 2.80402 3.28545 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 3 0.14147 3.38348 2.80402 3.28545 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 4 3.43682 0.12977 3.48612 2.83170 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 5 3.09186 2.59721 3.13989 0.17815 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 6 3.43682 0.12977 3.48612 2.83170 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 7 2.94039 2.24572 2.99390 0.23419 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 8 2.69542 2.43082 2.35634 0.28801 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 9 0.14147 3.38348 2.80402 3.28545 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 10 2.94977 3.59102 0.11680 3.49603 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 11 3.43682 0.12977 3.48612 2.83170 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 12 2.94977 3.59102 0.11680 3.49603 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 13 2.94977 3.59102 0.11680 3.49603 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 14 3.09186 2.59721 3.13989 0.17815 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 15 2.94977 3.59102 0.11680 3.49603 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 16 2.94977 3.59102 0.11680 3.49603 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 17 0.14147 3.38348 2.80402 3.28545 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 18 3.09186 2.59721 3.13989 0.17815 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 19 3.43682 0.12977 3.48612 2.83170 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 20 0.14147 3.38348 2.80402 3.28545 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 21 3.43682 0.12977 3.48612 2.83170 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 22 3.09186 2.59721 3.13989 0.17815 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 23 3.43682 0.12977 3.48612 2.83170 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 24 2.94977 3.59102 0.11680 3.49603 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 25 2.94977 3.59102 0.11680 3.49603 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 26 3.43682 0.12977 3.48612 2.83170 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 27 3.09186 2.59721 3.13989 0.17815 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 28 3.43682 0.12977 3.48612 2.83170 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 29 2.94977 3.59102 0.11680 3.49603 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 30 3.09186 2.59721 3.13989 0.17815 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 31 2.94977 3.59102 0.11680 3.49603 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 32 3.43682 0.12977 3.48612 2.83170 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 33 2.54151 3.38452 0.16292 3.27799 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 34 3.09186 2.59721 3.13989 0.17815 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 35 3.43682 0.12977 3.48612 2.83170 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 36 2.94977 3.59102 0.11680 3.49603 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 37 0.14147 3.38348 2.80402 3.28545 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 38 3.09186 2.59721 3.13989 0.17815 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 39 2.71953 3.14925 0.19713 2.65745 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 40 0.14147 3.38348 2.80402 3.28545 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 41 0.14147 3.38348 2.80402 3.28545 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 42 2.94977 3.59102 0.11680 3.49603 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 43 0.14147 3.38348 2.80402 3.28545 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 44 0.20263 3.17160 2.35722 3.06182 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 45 3.43682 0.12977 3.48612 2.83170 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99503 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:35 2012 NSEQ 10 EFFN 3.247070 CKSUM 3206921348 STATS LOCAL MSV -8.2213 0.71932 STATS LOCAL VITERBI -7.8415 0.71932 STATS LOCAL FORWARD -3.8688 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46632 1.46690 1.10152 1.57880 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 * 1 3.40484 0.13363 3.45549 2.80837 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 2 0.14518 3.35575 2.78597 3.25510 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 3 0.14518 3.35575 2.78597 3.25510 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 4 3.40484 0.13363 3.45549 2.80837 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 5 3.06393 2.57943 3.11303 0.18271 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 6 3.40484 0.13363 3.45549 2.80837 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 7 3.06393 2.57943 3.11303 0.18271 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 8 0.14518 3.35575 2.78597 3.25510 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 9 0.14518 3.35575 2.78597 3.25510 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 10 2.93035 3.56282 0.11992 3.46492 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 11 3.06393 2.57943 3.11303 0.18271 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 12 2.93035 3.56282 0.11992 3.46492 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 13 2.93035 3.56282 0.11992 3.46492 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 14 3.06393 2.57943 3.11303 0.18271 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 15 2.93035 3.56282 0.11992 3.46492 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 16 2.93035 3.56282 0.11992 3.46492 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 17 0.14518 3.35575 2.78597 3.25510 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 18 3.06393 2.57943 3.11303 0.18271 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 19 3.40484 0.13363 3.45549 2.80837 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 20 0.14518 3.35575 2.78597 3.25510 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 21 3.40484 0.13363 3.45549 2.80837 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 22 3.06393 2.57943 3.11303 0.18271 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 23 3.40484 0.13363 3.45549 2.80837 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 24 2.93035 3.56282 0.11992 3.46492 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 25 2.93035 3.56282 0.11992 3.46492 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 26 3.40484 0.13363 3.45549 2.80837 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 27 3.06393 2.57943 3.11303 0.18271 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 28 3.40484 0.13363 3.45549 2.80837 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 29 2.93035 3.56282 0.11992 3.46492 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 30 2.32215 2.52809 0.43127 1.75769 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 31 2.93035 3.56282 0.11992 3.46492 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 32 2.93035 3.56282 0.11992 3.46492 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 33 2.93035 3.56282 0.11992 3.46492 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 34 3.06393 2.57943 3.11303 0.18271 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 35 3.40484 0.13363 3.45549 2.80837 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 36 2.93035 3.56282 0.11992 3.46492 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 37 0.14518 3.35575 2.78597 3.25510 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 38 3.06393 2.57943 3.11303 0.18271 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 39 2.93035 3.56282 0.11992 3.46492 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 40 0.14518 3.35575 2.78597 3.25510 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 41 0.14518 3.35575 2.78597 3.25510 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 42 2.93035 3.56282 0.11992 3.46492 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 43 0.14518 3.35575 2.78597 3.25510 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 44 2.93035 3.56282 0.11992 3.46492 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 45 3.40484 0.13363 3.45549 2.80837 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97913 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:40 2012 NSEQ 25 EFFN 3.768921 CKSUM 1958450389 STATS LOCAL MSV -6.8992 0.71931 STATS LOCAL VITERBI -7.5325 0.71931 STATS LOCAL FORWARD -4.3956 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.57212 1.38838 1.16636 1.46353 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 0.00000 * 1 2.48307 0.88584 2.55439 0.85237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 2 2.50922 1.10611 2.57909 0.66946 2 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 3 0.12554 3.51306 2.88759 3.42758 3 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 4 3.58536 0.11343 3.62811 2.93859 4 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 5 3.22473 2.68150 3.26760 0.15820 5 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 6 3.58536 0.11343 3.62811 2.93859 6 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 7 3.22473 2.68150 3.26760 0.15820 7 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 8 0.12554 3.51306 2.88759 3.42758 8 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 9 0.60591 2.33919 1.63915 1.80867 9 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 10 3.03806 3.72071 0.10359 3.63957 10 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 11 3.58536 0.11343 3.62811 2.93859 11 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 12 3.03806 3.72071 0.10359 3.63957 12 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 13 3.03806 3.72071 0.10359 3.63957 13 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 14 3.22473 2.68150 3.26760 0.15820 14 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 15 3.03806 3.72071 0.10359 3.63957 15 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 16 3.03806 3.72071 0.10359 3.63957 16 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 17 0.12554 3.51306 2.88759 3.42758 17 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 18 3.22473 2.68150 3.26760 0.15820 18 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 19 3.58536 0.11343 3.62811 2.93859 19 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 20 0.12554 3.51306 2.88759 3.42758 20 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 21 3.58536 0.11343 3.62811 2.93859 21 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 22 3.22473 2.68150 3.26760 0.15820 22 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 23 3.58536 0.11343 3.62811 2.93859 23 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 24 3.03806 3.72071 0.10359 3.63957 24 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 25 3.03806 3.72071 0.10359 3.63957 25 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 26 3.58536 0.11343 3.62811 2.93859 26 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 27 3.22473 2.68150 3.26760 0.15820 27 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 28 3.58536 0.11343 3.62811 2.93859 28 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 29 3.03806 3.72071 0.10359 3.63957 29 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 30 3.22473 2.68150 3.26760 0.15820 30 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 31 3.03806 3.72071 0.10359 3.63957 31 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 32 2.06075 1.37151 1.50789 0.92245 32 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 33 3.03806 3.72071 0.10359 3.63957 33 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 34 3.22473 2.68150 3.26760 0.15820 34 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 35 3.58536 0.11343 3.62811 2.93859 35 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 36 3.03806 3.72071 0.10359 3.63957 36 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 37 0.12554 3.51306 2.88759 3.42758 37 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 38 3.22473 2.68150 3.26760 0.15820 38 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 39 3.03806 3.72071 0.10359 3.63957 39 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 40 0.12554 3.51306 2.88759 3.42758 40 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 41 0.12554 3.51306 2.88759 3.42758 41 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 42 3.03806 3.72071 0.10359 3.63957 42 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 43 0.12554 3.51306 2.88759 3.42758 43 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 44 3.03806 3.72071 0.10359 3.63957 44 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08915 4.08915 1.46634 0.26236 1.09861 0.40547 45 3.58536 0.11343 3.62811 2.93859 45 - - 1.38629 1.38629 1.38629 1.38629 0.01719 4.07226 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:45 2012 NSEQ 3 EFFN 3.000000 CKSUM 1530221864 STATS LOCAL MSV -7.9709 0.72006 STATS LOCAL VITERBI -7.7118 0.72006 STATS LOCAL FORWARD -4.1068 0.72006 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54975 1.26730 1.25893 1.50439 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 0.15719 3.27118 2.73043 3.16274 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:49 2012 NSEQ 12 EFFN 3.231445 CKSUM 3595403650 STATS LOCAL MSV -7.9439 0.71932 STATS LOCAL VITERBI -7.6666 0.71932 STATS LOCAL FORWARD -4.3889 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.56223 1.32606 1.19240 1.50816 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 * 1 3.39890 0.13436 3.44980 2.80403 1 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 2 0.14587 3.35060 2.78262 3.24947 2 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 3 0.30324 2.90483 1.93298 2.77896 3 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 4 3.39890 0.13436 3.44980 2.80403 4 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 5 3.05877 2.57614 3.10806 0.18356 5 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 6 3.39890 0.13436 3.44980 2.80403 6 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 7 3.05877 2.57614 3.10806 0.18356 7 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 8 0.14587 3.35060 2.78262 3.24947 8 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 9 3.05877 2.57614 3.10806 0.18356 9 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 10 2.92673 3.55757 0.12052 3.45913 10 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 11 3.39890 0.13436 3.44980 2.80403 11 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 12 2.92673 3.55757 0.12052 3.45913 12 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 13 2.92673 3.55757 0.12052 3.45913 13 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 14 3.05877 2.57614 3.10806 0.18356 14 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 15 2.92673 3.55757 0.12052 3.45913 15 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 16 2.92673 3.55757 0.12052 3.45913 16 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 17 0.14587 3.35060 2.78262 3.24947 17 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 18 3.05877 2.57614 3.10806 0.18356 18 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 19 3.39890 0.13436 3.44980 2.80403 19 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 20 0.14587 3.35060 2.78262 3.24947 20 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 21 3.39890 0.13436 3.44980 2.80403 21 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 22 3.05877 2.57614 3.10806 0.18356 22 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 23 3.39890 0.13436 3.44980 2.80403 23 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 24 2.92673 3.55757 0.12052 3.45913 24 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 25 2.92673 3.55757 0.12052 3.45913 25 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 26 3.39890 0.13436 3.44980 2.80403 26 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 27 3.05877 2.57614 3.10806 0.18356 27 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 28 3.39890 0.13436 3.44980 2.80403 28 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 29 2.92673 3.55757 0.12052 3.45913 29 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 30 3.05877 2.57614 3.10806 0.18356 30 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 31 2.92673 3.55757 0.12052 3.45913 31 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 32 3.39890 0.13436 3.44980 2.80403 32 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 33 2.92673 3.55757 0.12052 3.45913 33 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 34 3.05877 2.57614 3.10806 0.18356 34 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 35 3.39890 0.13436 3.44980 2.80403 35 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 36 2.92673 3.55757 0.12052 3.45913 36 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 37 0.14587 3.35060 2.78262 3.24947 37 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 38 3.05877 2.57614 3.10806 0.18356 38 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 39 2.92673 3.55757 0.12052 3.45913 39 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 40 0.14587 3.35060 2.78262 3.24947 40 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 41 0.14587 3.35060 2.78262 3.24947 41 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 42 2.92673 3.55757 0.12052 3.45913 42 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 43 0.14587 3.35060 2.78262 3.24947 43 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 44 2.92673 3.55757 0.12052 3.45913 44 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 45 3.39890 0.13436 3.44980 2.80403 45 - - 1.38629 1.38629 1.38629 1.38629 0.01893 3.97621 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onem_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:12:55 2012 NSEQ 67 EFFN 3.275574 CKSUM 1052117769 STATS LOCAL MSV -8.1070 0.71931 STATS LOCAL VITERBI -7.7354 0.71931 STATS LOCAL FORWARD -4.2705 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54402 1.45383 1.14014 1.45657 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 0.00000 * 1 2.60511 1.60359 2.67029 0.42205 1 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 2 0.14392 3.36506 2.79204 3.26529 2 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 3 0.14392 3.36506 2.79204 3.26529 3 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 4 3.41558 0.13232 3.46578 2.81622 4 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 5 3.07329 2.58539 3.12203 0.18117 5 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 6 3.07329 2.58539 3.12203 0.18117 6 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 7 3.07329 2.58539 3.12203 0.18117 7 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 8 2.93690 3.57231 0.11886 3.47538 8 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 9 0.14392 3.36506 2.79204 3.26529 9 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 10 2.93690 3.57231 0.11886 3.47538 10 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 11 3.41558 0.13232 3.46578 2.81622 11 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 12 2.93690 3.57231 0.11886 3.47538 12 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 13 2.93690 3.57231 0.11886 3.47538 13 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 14 3.07329 2.58539 3.12203 0.18117 14 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 15 2.93690 3.57231 0.11886 3.47538 15 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 16 2.93690 3.57231 0.11886 3.47538 16 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 17 0.14392 3.36506 2.79204 3.26529 17 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 18 3.07329 2.58539 3.12203 0.18117 18 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 19 3.41558 0.13232 3.46578 2.81622 19 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 20 0.14392 3.36506 2.79204 3.26529 20 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 21 3.41558 0.13232 3.46578 2.81622 21 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 22 3.07329 2.58539 3.12203 0.18117 22 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 23 3.41558 0.13232 3.46578 2.81622 23 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 24 2.84909 3.19562 0.14671 3.28021 24 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 25 2.93690 3.57231 0.11886 3.47538 25 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 26 3.41558 0.13232 3.46578 2.81622 26 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 27 3.07329 2.58539 3.12203 0.18117 27 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 28 3.41558 0.13232 3.46578 2.81622 28 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 29 2.93690 3.57231 0.11886 3.47538 29 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 30 3.07329 2.58539 3.12203 0.18117 30 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 31 2.93690 3.57231 0.11886 3.47538 31 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 32 3.41558 0.13232 3.46578 2.81622 32 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 33 2.93690 3.57231 0.11886 3.47538 33 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 34 3.07329 2.58539 3.12203 0.18117 34 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 35 3.41558 0.13232 3.46578 2.81622 35 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 36 2.93690 3.57231 0.11886 3.47538 36 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 37 0.14392 3.36506 2.79204 3.26529 37 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 38 3.07329 2.58539 3.12203 0.18117 38 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 39 2.93690 3.57231 0.11886 3.47538 39 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 40 0.14392 3.36506 2.79204 3.26529 40 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 41 0.14392 3.36506 2.79204 3.26529 41 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 42 2.93690 3.57231 0.11886 3.47538 42 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 43 0.14392 3.36506 2.79204 3.26529 43 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 44 2.93690 3.57231 0.11886 3.47538 44 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 45 3.41558 0.13232 3.46578 2.81622 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98445 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:00 2012 NSEQ 36 EFFN 3.511230 CKSUM 2085619721 STATS LOCAL MSV -7.2493 0.71933 STATS LOCAL VITERBI -7.5654 0.71933 STATS LOCAL FORWARD -4.2751 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.50964 1.42548 1.18575 1.45628 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 0.00000 * 1 2.45497 0.77017 2.52710 0.99072 1 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 2 0.85115 2.19026 2.18289 1.05419 2 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 3 0.13441 3.43877 2.83979 3.34604 3 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 4 3.50040 0.12246 3.54695 2.87773 4 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 5 3.14806 2.63290 3.19393 0.16938 5 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 6 3.50040 0.12246 3.54695 2.87773 6 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 7 3.14806 2.63290 3.19393 0.16938 7 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 8 0.13441 3.43877 2.83979 3.34604 8 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 9 0.13441 3.43877 2.83979 3.34604 9 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 10 2.98791 3.64678 0.11090 3.55766 10 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 11 3.50040 0.12246 3.54695 2.87773 11 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 12 2.98791 3.64678 0.11090 3.55766 12 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 13 2.98791 3.64678 0.11090 3.55766 13 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 14 3.14806 2.63290 3.19393 0.16938 14 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 15 2.98791 3.64678 0.11090 3.55766 15 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 16 2.98791 3.64678 0.11090 3.55766 16 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 17 0.13441 3.43877 2.83979 3.34604 17 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 18 3.14806 2.63290 3.19393 0.16938 18 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 19 3.50040 0.12246 3.54695 2.87773 19 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 20 0.13441 3.43877 2.83979 3.34604 20 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 21 3.50040 0.12246 3.54695 2.87773 21 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 22 3.14806 2.63290 3.19393 0.16938 22 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 23 3.50040 0.12246 3.54695 2.87773 23 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 24 2.98791 3.64678 0.11090 3.55766 24 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 25 2.98791 3.64678 0.11090 3.55766 25 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 26 3.21387 0.18937 3.26983 2.36118 26 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 27 3.14806 2.63290 3.19393 0.16938 27 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 28 3.50040 0.12246 3.54695 2.87773 28 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 29 2.98791 3.64678 0.11090 3.55766 29 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 30 3.14806 2.63290 3.19393 0.16938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 31 2.98791 3.64678 0.11090 3.55766 31 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 32 2.96561 2.20742 3.01855 0.23621 32 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 33 2.98791 3.64678 0.11090 3.55766 33 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 34 3.14806 2.63290 3.19393 0.16938 34 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 35 3.50040 0.12246 3.54695 2.87773 35 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 36 2.98791 3.64678 0.11090 3.55766 36 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 37 0.13441 3.43877 2.83979 3.34604 37 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 38 3.14806 2.63290 3.19393 0.16938 38 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 39 2.98791 3.64678 0.11090 3.55766 39 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 40 0.13441 3.43877 2.83979 3.34604 40 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 41 0.13441 3.43877 2.83979 3.34604 41 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 42 2.98791 3.64678 0.11090 3.55766 42 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 43 0.13441 3.43877 2.83979 3.34604 43 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 44 2.98791 3.64678 0.11090 3.55766 44 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 45 3.50040 0.12246 3.54695 2.87773 45 - - 1.38629 1.38629 1.38629 1.38629 0.01798 4.02736 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oneo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:05 2012 NSEQ 4 EFFN 3.183594 CKSUM 3162319453 STATS LOCAL MSV -7.9834 0.71933 STATS LOCAL VITERBI -7.8581 0.71933 STATS LOCAL FORWARD -4.2189 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62781 1.39287 1.14320 1.44187 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 0.00000 * 1 0.14807 3.33468 2.77222 3.23207 1 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 2 3.38051 0.13666 3.43217 2.79055 2 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 3 0.14807 3.33468 2.77222 3.23207 3 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 4 3.38051 0.13666 3.43217 2.79055 4 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 5 3.04283 2.56598 3.09273 0.18624 5 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 6 3.38051 0.13666 3.43217 2.79055 6 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 7 3.04283 2.56598 3.09273 0.18624 7 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 8 3.04283 2.56598 3.09273 0.18624 8 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 9 2.91546 3.54130 0.12237 3.44120 9 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 10 2.91546 3.54130 0.12237 3.44120 10 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 11 3.38051 0.13666 3.43217 2.79055 11 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 12 2.91546 3.54130 0.12237 3.44120 12 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 13 2.91546 3.54130 0.12237 3.44120 13 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 14 3.04283 2.56598 3.09273 0.18624 14 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 15 2.91546 3.54130 0.12237 3.44120 15 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 16 2.91546 3.54130 0.12237 3.44120 16 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 17 0.14807 3.33468 2.77222 3.23207 17 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 18 3.04283 2.56598 3.09273 0.18624 18 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 19 3.38051 0.13666 3.43217 2.79055 19 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 20 0.14807 3.33468 2.77222 3.23207 20 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 21 3.38051 0.13666 3.43217 2.79055 21 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 22 3.04283 2.56598 3.09273 0.18624 22 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 23 3.38051 0.13666 3.43217 2.79055 23 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 24 2.91546 3.54130 0.12237 3.44120 24 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 25 2.91546 3.54130 0.12237 3.44120 25 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 26 3.04283 2.56598 3.09273 0.18624 26 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 27 3.04283 2.56598 3.09273 0.18624 27 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 28 3.38051 0.13666 3.43217 2.79055 28 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 29 2.91546 3.54130 0.12237 3.44120 29 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 30 3.04283 2.56598 3.09273 0.18624 30 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 31 2.91546 3.54130 0.12237 3.44120 31 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 32 3.38051 0.13666 3.43217 2.79055 32 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 33 2.91546 3.54130 0.12237 3.44120 33 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 34 3.04283 2.56598 3.09273 0.18624 34 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 35 3.38051 0.13666 3.43217 2.79055 35 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 36 2.91546 3.54130 0.12237 3.44120 36 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 37 0.14807 3.33468 2.77222 3.23207 37 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 38 3.04283 2.56598 3.09273 0.18624 38 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 39 2.91546 3.54130 0.12237 3.44120 39 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 40 0.14807 3.33468 2.77222 3.23207 40 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 41 0.14807 3.33468 2.77222 3.23207 41 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 42 2.91546 3.54130 0.12237 3.44120 42 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 43 0.14807 3.33468 2.77222 3.23207 43 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 44 2.91546 3.54130 0.12237 3.44120 44 - - 1.38629 1.38629 1.38629 1.38629 0.03786 3.98594 3.98594 1.46634 0.26236 1.09861 0.40547 45 3.38051 0.13666 3.43217 2.79055 45 - - 1.38629 1.38629 1.38629 1.38629 0.01911 3.96719 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onep_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:11 2012 NSEQ 2 EFFN 2.000000 CKSUM 1940936314 STATS LOCAL MSV -7.3708 0.72759 STATS LOCAL VITERBI -8.1974 0.72759 STATS LOCAL FORWARD -3.7751 0.72759 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.52005 1.34721 1.21583 1.49224 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oneq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:16 2012 NSEQ 2 EFFN 2.000000 CKSUM 3036652137 STATS LOCAL MSV -7.5069 0.72803 STATS LOCAL VITERBI -8.2859 0.72803 STATS LOCAL FORWARD -3.3219 0.72803 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.37220 1.35028 1.24302 1.61559 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.92825 2.28391 0.95698 2.13014 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.23862 2.84929 2.43386 2.70756 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_oner_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:21 2012 NSEQ 8 EFFN 3.199219 CKSUM 1827277924 STATS LOCAL MSV -8.0167 0.71933 STATS LOCAL VITERBI -7.6622 0.71933 STATS LOCAL FORWARD -4.3529 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72054 1.38848 1.14415 1.37404 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 * 1 3.38655 0.13590 3.43796 2.79498 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 2 3.04806 2.56931 3.09775 0.18535 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 3 0.14734 3.33991 2.77563 3.23778 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 4 3.38655 0.13590 3.43796 2.79498 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 5 3.04806 2.56931 3.09775 0.18535 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 6 3.38655 0.13590 3.43796 2.79498 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 7 3.04806 2.56931 3.09775 0.18535 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 8 2.91917 3.54665 0.12176 3.44709 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 9 3.04806 2.56931 3.09775 0.18535 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 10 2.91917 3.54665 0.12176 3.44709 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 11 3.38655 0.13590 3.43796 2.79498 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 12 2.91917 3.54665 0.12176 3.44709 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 13 2.91917 3.54665 0.12176 3.44709 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 14 3.04806 2.56931 3.09775 0.18535 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 15 2.91917 3.54665 0.12176 3.44709 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 16 2.91917 3.54665 0.12176 3.44709 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 17 0.14734 3.33991 2.77563 3.23778 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 18 3.04806 2.56931 3.09775 0.18535 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 19 3.38655 0.13590 3.43796 2.79498 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 20 0.14734 3.33991 2.77563 3.23778 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 21 3.38655 0.13590 3.43796 2.79498 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 22 3.04806 2.56931 3.09775 0.18535 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 23 3.38655 0.13590 3.43796 2.79498 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 24 2.91917 3.54665 0.12176 3.44709 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 25 2.91917 3.54665 0.12176 3.44709 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 26 3.38655 0.13590 3.43796 2.79498 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 27 3.04806 2.56931 3.09775 0.18535 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 28 3.38655 0.13590 3.43796 2.79498 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 29 2.91917 3.54665 0.12176 3.44709 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 30 3.04806 2.56931 3.09775 0.18535 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 31 2.91917 3.54665 0.12176 3.44709 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 32 3.04806 2.56931 3.09775 0.18535 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 33 2.91917 3.54665 0.12176 3.44709 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 34 3.04806 2.56931 3.09775 0.18535 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 35 3.38655 0.13590 3.43796 2.79498 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 36 2.91917 3.54665 0.12176 3.44709 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 37 0.14734 3.33991 2.77563 3.23778 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 38 3.04806 2.56931 3.09775 0.18535 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 39 2.91917 3.54665 0.12176 3.44709 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 40 0.14734 3.33991 2.77563 3.23778 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 41 0.14734 3.33991 2.77563 3.23778 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 42 2.91917 3.54665 0.12176 3.44709 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 43 0.14734 3.33991 2.77563 3.23778 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 44 2.91917 3.54665 0.12176 3.44709 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 45 3.38655 0.13590 3.43796 2.79498 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97014 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_ones_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:29 2012 NSEQ 2 EFFN 2.000000 CKSUM 3483693243 STATS LOCAL MSV -7.4492 0.72782 STATS LOCAL VITERBI -8.1187 0.72782 STATS LOCAL FORWARD -3.4857 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29189 1.29167 1.43650 1.54798 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.23862 2.84929 2.43386 2.70756 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_onet_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:36 2012 NSEQ 19 EFFN 3.186768 CKSUM 722966639 STATS LOCAL MSV -8.0861 0.71934 STATS LOCAL VITERBI -7.7379 0.71934 STATS LOCAL FORWARD -4.2531 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54585 1.46628 1.14119 1.44118 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 0.00000 * 1 3.04390 2.56666 3.09375 0.18606 1 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 2 0.14792 3.33575 2.77291 3.23323 2 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 3 0.14792 3.33575 2.77291 3.23323 3 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 4 3.38174 0.13651 3.43335 2.79145 4 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 5 3.04390 2.56666 3.09375 0.18606 5 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 6 3.04390 2.56666 3.09375 0.18606 6 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 7 3.04390 2.56666 3.09375 0.18606 7 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 8 2.91622 3.54239 0.12225 3.44240 8 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 9 0.14792 3.33575 2.77291 3.23323 9 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 10 2.91622 3.54239 0.12225 3.44240 10 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 11 3.38174 0.13651 3.43335 2.79145 11 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 12 2.91622 3.54239 0.12225 3.44240 12 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 13 2.91622 3.54239 0.12225 3.44240 13 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 14 3.04390 2.56666 3.09375 0.18606 14 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 15 2.91622 3.54239 0.12225 3.44240 15 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 16 2.91622 3.54239 0.12225 3.44240 16 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 17 0.14792 3.33575 2.77291 3.23323 17 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 18 3.04390 2.56666 3.09375 0.18606 18 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 19 3.38174 0.13651 3.43335 2.79145 19 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 20 0.14792 3.33575 2.77291 3.23323 20 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 21 3.38174 0.13651 3.43335 2.79145 21 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 22 3.04390 2.56666 3.09375 0.18606 22 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 23 3.38174 0.13651 3.43335 2.79145 23 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 24 2.91622 3.54239 0.12225 3.44240 24 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 25 2.91622 3.54239 0.12225 3.44240 25 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 26 3.38174 0.13651 3.43335 2.79145 26 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 27 3.04390 2.56666 3.09375 0.18606 27 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 28 3.38174 0.13651 3.43335 2.79145 28 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 29 2.91622 3.54239 0.12225 3.44240 29 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 30 3.04390 2.56666 3.09375 0.18606 30 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 31 2.91622 3.54239 0.12225 3.44240 31 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 32 3.38174 0.13651 3.43335 2.79145 32 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 33 2.91622 3.54239 0.12225 3.44240 33 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 34 3.04390 2.56666 3.09375 0.18606 34 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 35 3.38174 0.13651 3.43335 2.79145 35 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 36 2.91622 3.54239 0.12225 3.44240 36 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 37 0.14792 3.33575 2.77291 3.23323 37 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 38 3.04390 2.56666 3.09375 0.18606 38 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 39 2.91622 3.54239 0.12225 3.44240 39 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 40 0.14792 3.33575 2.77291 3.23323 40 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 41 0.14792 3.33575 2.77291 3.23323 41 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 42 2.91622 3.54239 0.12225 3.44240 42 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 43 0.14792 3.33575 2.77291 3.23323 43 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 44 2.91622 3.54239 0.12225 3.44240 44 - - 1.38629 1.38629 1.38629 1.38629 0.03783 3.98653 3.98653 1.46634 0.26236 1.09861 0.40547 45 3.38174 0.13651 3.43335 2.79145 45 - - 1.38629 1.38629 1.38629 1.38629 0.01910 3.96779 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_sevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:03 2012 NSEQ 33 EFFN 3.226685 CKSUM 3895814705 STATS LOCAL MSV -8.1231 0.71932 STATS LOCAL VITERBI -7.7927 0.71932 STATS LOCAL FORWARD -4.2040 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26742 1.47087 1.25669 1.58904 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 0.00000 * 1 0.14609 3.34903 2.78159 3.24776 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 2 0.14609 3.34903 2.78159 3.24776 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 3 0.14609 3.34903 2.78159 3.24776 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 4 3.39708 0.13459 3.44806 2.80270 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 5 3.39708 0.13459 3.44806 2.80270 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 6 3.05719 2.57514 3.10654 0.18382 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 7 3.05719 2.57514 3.10654 0.18382 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 8 0.14609 3.34903 2.78159 3.24776 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 9 0.14609 3.34903 2.78159 3.24776 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 10 0.14609 3.34903 2.78159 3.24776 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 11 3.39708 0.13459 3.44806 2.80270 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 12 2.18462 3.13998 0.22900 3.01864 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 13 2.92562 3.55597 0.12070 3.45736 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 14 2.92562 3.55597 0.12070 3.45736 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 15 2.92562 3.55597 0.12070 3.45736 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 16 2.92562 3.55597 0.12070 3.45736 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 17 0.14609 3.34903 2.78159 3.24776 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 18 3.05719 2.57514 3.10654 0.18382 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 19 3.39708 0.13459 3.44806 2.80270 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 20 0.14609 3.34903 2.78159 3.24776 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 21 3.39708 0.13459 3.44806 2.80270 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 22 3.05719 2.57514 3.10654 0.18382 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 23 3.05719 2.57514 3.10654 0.18382 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 24 2.92562 3.55597 0.12070 3.45736 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 25 2.92562 3.55597 0.12070 3.45736 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 26 3.39708 0.13459 3.44806 2.80270 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 27 3.05719 2.57514 3.10654 0.18382 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 28 3.39708 0.13459 3.44806 2.80270 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 29 0.14609 3.34903 2.78159 3.24776 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 30 3.05719 2.57514 3.10654 0.18382 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 31 2.92562 3.55597 0.12070 3.45736 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 32 2.92562 3.55597 0.12070 3.45736 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 33 2.92562 3.55597 0.12070 3.45736 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 34 3.05719 2.57514 3.10654 0.18382 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 35 3.39708 0.13459 3.44806 2.80270 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 36 2.92562 3.55597 0.12070 3.45736 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 37 0.14609 3.34903 2.78159 3.24776 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 38 3.05719 2.57514 3.10654 0.18382 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 39 2.92562 3.55597 0.12070 3.45736 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 40 0.14609 3.34903 2.78159 3.24776 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 41 0.14609 3.34903 2.78159 3.24776 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 42 2.92562 3.55597 0.12070 3.45736 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 43 0.14609 3.34903 2.78159 3.24776 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 44 3.39708 0.13459 3.44806 2.80270 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 45 3.39708 0.13459 3.44806 2.80270 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97531 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_sevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:21:10 2012 NSEQ 3 EFFN 3.000000 CKSUM 1225994552 STATS LOCAL MSV -7.9561 0.72003 STATS LOCAL VITERBI -7.8167 0.72003 STATS LOCAL FORWARD -3.8315 0.72003 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33729 1.40049 1.25326 1.58281 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.15719 3.27118 2.73043 3.16274 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:25:19 2012 NSEQ 37 EFFN 3.130005 CKSUM 2559124236 STATS LOCAL MSV -8.0966 0.71931 STATS LOCAL VITERBI -7.8628 0.71931 STATS LOCAL FORWARD -3.7948 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33527 1.34010 1.19529 1.75749 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 0.00000 * 1 0.15061 3.31655 2.76033 3.21225 1 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 2 0.15061 3.31655 2.76033 3.21225 2 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 3 0.15061 3.31655 2.76033 3.21225 3 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 4 3.35955 0.13934 3.41207 2.77513 4 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 5 3.35955 0.13934 3.41207 2.77513 5 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 6 3.35955 0.13934 3.41207 2.77513 6 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 7 3.02474 2.55443 3.07532 0.18932 7 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 8 0.15061 3.31655 2.76033 3.21225 8 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 9 2.90255 3.52270 0.12453 3.42073 9 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 10 2.90255 3.52270 0.12453 3.42073 10 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 11 3.35955 0.13934 3.41207 2.77513 11 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 12 0.15061 3.31655 2.76033 3.21225 12 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 13 2.90255 3.52270 0.12453 3.42073 13 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 14 2.90255 3.52270 0.12453 3.42073 14 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 15 2.90255 3.52270 0.12453 3.42073 15 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 16 2.90255 3.52270 0.12453 3.42073 16 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 17 0.15061 3.31655 2.76033 3.21225 17 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 18 3.02474 2.55443 3.07532 0.18932 18 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 19 3.35955 0.13934 3.41207 2.77513 19 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 20 0.15061 3.31655 2.76033 3.21225 20 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 21 3.35955 0.13934 3.41207 2.77513 21 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 22 3.02474 2.55443 3.07532 0.18932 22 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 23 3.35955 0.13934 3.41207 2.77513 23 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 24 2.90255 3.52270 0.12453 3.42073 24 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 25 2.90255 3.52270 0.12453 3.42073 25 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 26 3.35955 0.13934 3.41207 2.77513 26 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 27 3.02474 2.55443 3.07532 0.18932 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 28 3.35955 0.13934 3.41207 2.77513 28 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 29 2.90255 3.52270 0.12453 3.42073 29 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 30 3.02474 2.55443 3.07532 0.18932 30 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 31 2.90255 3.52270 0.12453 3.42073 31 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 32 2.90255 3.52270 0.12453 3.42073 32 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 33 0.15061 3.31655 2.76033 3.21225 33 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 34 3.02474 2.55443 3.07532 0.18932 34 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 35 3.35955 0.13934 3.41207 2.77513 35 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 36 2.90255 3.52270 0.12453 3.42073 36 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 37 0.15061 3.31655 2.76033 3.21225 37 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 38 3.02474 2.55443 3.07532 0.18932 38 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 39 2.90255 3.52270 0.12453 3.42073 39 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 40 0.15061 3.31655 2.76033 3.21225 40 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 41 0.15061 3.31655 2.76033 3.21225 41 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 42 2.90255 3.52270 0.12453 3.42073 42 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 43 0.15061 3.31655 2.76033 3.21225 43 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 44 3.35955 0.13934 3.41207 2.77513 44 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97594 3.97594 1.46634 0.26236 1.09861 0.40547 45 3.35955 0.13934 3.41207 2.77513 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95700 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:20:50 2012 NSEQ 14 EFFN 3.318848 CKSUM 2983350357 STATS LOCAL MSV -8.1192 0.71933 STATS LOCAL VITERBI -7.6210 0.71933 STATS LOCAL FORWARD -3.8444 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23470 1.39154 1.29524 1.67903 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 0.00000 * 1 0.14206 3.37903 2.80113 3.28058 1 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 2 3.43169 0.13038 3.48121 2.82797 2 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 3 0.14206 3.37903 2.80113 3.28058 3 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 4 2.76265 1.89290 2.82268 0.31911 4 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 5 3.43169 0.13038 3.48121 2.82797 5 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 6 3.43169 0.13038 3.48121 2.82797 6 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 7 3.08737 2.59435 3.13557 0.17888 7 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 8 0.14206 3.37903 2.80113 3.28058 8 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 9 2.94667 3.58651 0.11730 3.49105 9 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 10 0.14206 3.37903 2.80113 3.28058 10 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 11 3.43169 0.13038 3.48121 2.82797 11 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 12 0.14206 3.37903 2.80113 3.28058 12 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 13 2.94667 3.58651 0.11730 3.49105 13 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 14 2.94667 3.58651 0.11730 3.49105 14 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 15 2.94667 3.58651 0.11730 3.49105 15 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 16 2.94667 3.58651 0.11730 3.49105 16 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 17 0.14206 3.37903 2.80113 3.28058 17 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 18 3.08737 2.59435 3.13557 0.17888 18 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 19 3.43169 0.13038 3.48121 2.82797 19 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 20 0.14206 3.37903 2.80113 3.28058 20 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 21 3.43169 0.13038 3.48121 2.82797 21 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 22 3.08737 2.59435 3.13557 0.17888 22 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 23 0.14206 3.37903 2.80113 3.28058 23 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 24 2.94667 3.58651 0.11730 3.49105 24 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 25 2.94667 3.58651 0.11730 3.49105 25 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 26 3.43169 0.13038 3.48121 2.82797 26 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 27 3.08737 2.59435 3.13557 0.17888 27 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 28 3.43169 0.13038 3.48121 2.82797 28 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 29 0.14206 3.37903 2.80113 3.28058 29 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 30 3.08737 2.59435 3.13557 0.17888 30 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 31 2.94667 3.58651 0.11730 3.49105 31 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 32 2.94667 3.58651 0.11730 3.49105 32 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 33 0.55410 2.60362 1.32347 2.46278 33 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 34 3.08737 2.59435 3.13557 0.17888 34 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 35 3.43169 0.13038 3.48121 2.82797 35 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 36 2.94667 3.58651 0.11730 3.49105 36 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 37 0.14206 3.37903 2.80113 3.28058 37 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 38 3.08737 2.59435 3.13557 0.17888 38 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 39 2.94667 3.58651 0.11730 3.49105 39 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 40 0.14206 3.37903 2.80113 3.28058 40 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 41 0.14206 3.37903 2.80113 3.28058 41 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 42 2.94667 3.58651 0.11730 3.49105 42 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 43 0.14206 3.37903 2.80113 3.28058 43 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 44 3.43169 0.13038 3.48121 2.82797 44 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01075 4.01075 1.46634 0.26236 1.09861 0.40547 45 3.43169 0.13038 3.48121 2.82797 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99247 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:25:09 2012 NSEQ 11 EFFN 3.279053 CKSUM 3971834909 STATS LOCAL MSV -8.0429 0.71932 STATS LOCAL VITERBI -7.6961 0.71932 STATS LOCAL FORWARD -4.2466 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.44601 1.30717 1.19132 1.66028 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 0.00000 * 1 1.03707 0.94572 2.13766 1.97200 1 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 2 0.14377 3.36619 2.79278 3.26653 2 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 3 0.14377 3.36619 2.79278 3.26653 3 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 4 3.41689 0.13216 3.46703 2.81717 4 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 5 3.41689 0.13216 3.46703 2.81717 5 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 6 3.41689 0.13216 3.46703 2.81717 6 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 7 3.41689 0.13216 3.46703 2.81717 7 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 8 2.93769 3.57346 0.11874 3.47665 8 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 9 0.14377 3.36619 2.79278 3.26653 9 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 10 0.14377 3.36619 2.79278 3.26653 10 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 11 3.41689 0.13216 3.46703 2.81717 11 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 12 2.93769 3.57346 0.11874 3.47665 12 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 13 2.93769 3.57346 0.11874 3.47665 13 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 14 3.07443 2.58612 3.12312 0.18098 14 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 15 2.93769 3.57346 0.11874 3.47665 15 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 16 2.93769 3.57346 0.11874 3.47665 16 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 17 0.14377 3.36619 2.79278 3.26653 17 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 18 3.07443 2.58612 3.12312 0.18098 18 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 19 3.41689 0.13216 3.46703 2.81717 19 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 20 0.14377 3.36619 2.79278 3.26653 20 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 21 3.41689 0.13216 3.46703 2.81717 21 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 22 3.07443 2.58612 3.12312 0.18098 22 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 23 3.07443 2.58612 3.12312 0.18098 23 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 24 2.93769 3.57346 0.11874 3.47665 24 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 25 2.93769 3.57346 0.11874 3.47665 25 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 26 3.41689 0.13216 3.46703 2.81717 26 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 27 3.07443 2.58612 3.12312 0.18098 27 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 28 3.41689 0.13216 3.46703 2.81717 28 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 29 2.93769 3.57346 0.11874 3.47665 29 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 30 3.07443 2.58612 3.12312 0.18098 30 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 31 2.93769 3.57346 0.11874 3.47665 31 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 32 2.93769 3.57346 0.11874 3.47665 32 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 33 2.93769 3.57346 0.11874 3.47665 33 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 34 3.07443 2.58612 3.12312 0.18098 34 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 35 3.41689 0.13216 3.46703 2.81717 35 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 36 2.93769 3.57346 0.11874 3.47665 36 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 37 0.14377 3.36619 2.79278 3.26653 37 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 38 3.07443 2.58612 3.12312 0.18098 38 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 39 2.93769 3.57346 0.11874 3.47665 39 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 40 0.14377 3.36619 2.79278 3.26653 40 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 41 0.14377 3.36619 2.79278 3.26653 41 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 42 2.93769 3.57346 0.11874 3.47665 42 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 43 0.14377 3.36619 2.79278 3.26653 43 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 44 3.41689 0.13216 3.46703 2.81717 44 - - 1.38629 1.38629 1.38629 1.38629 0.03719 4.00352 4.00352 1.46634 0.26236 1.09861 0.40547 45 3.41689 0.13216 3.46703 2.81717 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98510 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:10 2012 NSEQ 7 EFFN 3.209473 CKSUM 4051946853 STATS LOCAL MSV -8.1094 0.71932 STATS LOCAL VITERBI -7.7031 0.71932 STATS LOCAL FORWARD -4.2976 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47474 1.39097 1.25491 1.43874 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 0.00000 * 1 3.39050 0.13541 3.44174 2.79787 1 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 2 3.05148 2.57149 3.10104 0.18478 2 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 3 0.14687 3.34333 2.77786 3.24152 3 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 4 3.05148 2.57149 3.10104 0.18478 4 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 5 3.39050 0.13541 3.44174 2.79787 5 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 6 3.39050 0.13541 3.44174 2.79787 6 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 7 3.05148 2.57149 3.10104 0.18478 7 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 8 0.14687 3.34333 2.77786 3.24152 8 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 9 3.05148 2.57149 3.10104 0.18478 9 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 10 2.92158 3.55014 0.12136 3.45094 10 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 11 3.39050 0.13541 3.44174 2.79787 11 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 12 2.92158 3.55014 0.12136 3.45094 12 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 13 2.92158 3.55014 0.12136 3.45094 13 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 14 3.05148 2.57149 3.10104 0.18478 14 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 15 2.92158 3.55014 0.12136 3.45094 15 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 16 2.92158 3.55014 0.12136 3.45094 16 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 17 0.14687 3.34333 2.77786 3.24152 17 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 18 3.05148 2.57149 3.10104 0.18478 18 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 19 3.39050 0.13541 3.44174 2.79787 19 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 20 0.14687 3.34333 2.77786 3.24152 20 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 21 3.39050 0.13541 3.44174 2.79787 21 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 22 3.05148 2.57149 3.10104 0.18478 22 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 23 3.39050 0.13541 3.44174 2.79787 23 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 24 2.92158 3.55014 0.12136 3.45094 24 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 25 2.92158 3.55014 0.12136 3.45094 25 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 26 3.39050 0.13541 3.44174 2.79787 26 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 27 3.05148 2.57149 3.10104 0.18478 27 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 28 3.39050 0.13541 3.44174 2.79787 28 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 29 2.92158 3.55014 0.12136 3.45094 29 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 30 3.05148 2.57149 3.10104 0.18478 30 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 31 2.92158 3.55014 0.12136 3.45094 31 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 32 2.92158 3.55014 0.12136 3.45094 32 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 33 0.14687 3.34333 2.77786 3.24152 33 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 34 3.05148 2.57149 3.10104 0.18478 34 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 35 3.39050 0.13541 3.44174 2.79787 35 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 36 2.92158 3.55014 0.12136 3.45094 36 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 37 0.14687 3.34333 2.77786 3.24152 37 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 38 3.05148 2.57149 3.10104 0.18478 38 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 39 2.92158 3.55014 0.12136 3.45094 39 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 40 0.14687 3.34333 2.77786 3.24152 40 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 41 0.14687 3.34333 2.77786 3.24152 41 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 42 2.92158 3.55014 0.12136 3.45094 42 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 43 0.14687 3.34333 2.77786 3.24152 43 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 44 0.14687 3.34333 2.77786 3.24152 44 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 45 3.39050 0.13541 3.44174 2.79787 45 - - 1.38629 1.38629 1.38629 1.38629 0.01901 3.97208 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:45 2012 NSEQ 4 EFFN 3.152344 CKSUM 810384303 STATS LOCAL MSV -8.0298 0.71932 STATS LOCAL VITERBI -7.7615 0.71932 STATS LOCAL FORWARD -4.0731 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47142 1.39865 1.14135 1.58922 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 0.00000 * 1 3.36834 0.13821 3.42049 2.78160 1 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 2 0.14954 3.32415 2.76532 3.22056 2 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 3 0.14954 3.32415 2.76532 3.22056 3 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 4 3.36834 0.13821 3.42049 2.78160 4 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 5 3.36834 0.13821 3.42049 2.78160 5 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 6 3.03232 2.55926 3.08260 0.18802 6 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 7 3.36834 0.13821 3.42049 2.78160 7 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 8 2.90797 3.53050 0.12362 3.42932 8 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 9 0.14954 3.32415 2.76532 3.22056 9 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 10 2.90797 3.53050 0.12362 3.42932 10 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 11 3.03232 2.55926 3.08260 0.18802 11 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 12 2.90797 3.53050 0.12362 3.42932 12 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 13 2.90797 3.53050 0.12362 3.42932 13 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 14 3.03232 2.55926 3.08260 0.18802 14 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 15 2.90797 3.53050 0.12362 3.42932 15 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 16 2.90797 3.53050 0.12362 3.42932 16 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 17 0.14954 3.32415 2.76532 3.22056 17 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 18 3.03232 2.55926 3.08260 0.18802 18 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 19 3.36834 0.13821 3.42049 2.78160 19 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 20 0.14954 3.32415 2.76532 3.22056 20 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 21 3.36834 0.13821 3.42049 2.78160 21 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 22 3.03232 2.55926 3.08260 0.18802 22 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 23 3.36834 0.13821 3.42049 2.78160 23 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 24 2.90797 3.53050 0.12362 3.42932 24 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 25 2.90797 3.53050 0.12362 3.42932 25 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 26 3.36834 0.13821 3.42049 2.78160 26 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 27 3.03232 2.55926 3.08260 0.18802 27 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 28 3.36834 0.13821 3.42049 2.78160 28 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 29 2.90797 3.53050 0.12362 3.42932 29 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 30 3.03232 2.55926 3.08260 0.18802 30 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 31 2.90797 3.53050 0.12362 3.42932 31 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 32 2.90797 3.53050 0.12362 3.42932 32 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 33 2.90797 3.53050 0.12362 3.42932 33 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 34 3.03232 2.55926 3.08260 0.18802 34 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 35 3.36834 0.13821 3.42049 2.78160 35 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 36 2.90797 3.53050 0.12362 3.42932 36 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 37 0.14954 3.32415 2.76532 3.22056 37 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 38 3.03232 2.55926 3.08260 0.18802 38 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 39 2.90797 3.53050 0.12362 3.42932 39 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 40 0.14954 3.32415 2.76532 3.22056 40 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 41 0.14954 3.32415 2.76532 3.22056 41 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 42 2.90797 3.53050 0.12362 3.42932 42 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 43 0.14954 3.32415 2.76532 3.22056 43 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 44 0.14954 3.32415 2.76532 3.22056 44 - - 1.38629 1.38629 1.38629 1.38629 0.03808 3.98012 3.98012 1.46634 0.26236 1.09861 0.40547 45 3.36834 0.13821 3.42049 2.78160 45 - - 1.38629 1.38629 1.38629 1.38629 0.01922 3.96126 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:30 2012 NSEQ 7 EFFN 3.264160 CKSUM 812206563 STATS LOCAL MSV -8.0813 0.71932 STATS LOCAL VITERBI -7.6510 0.71932 STATS LOCAL FORWARD -3.9317 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46033 1.26627 1.27290 1.58016 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 0.00000 * 1 0.14442 3.36134 2.78962 3.26122 1 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 2 2.93428 3.56852 0.11929 3.47120 2 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 3 0.14442 3.36134 2.78962 3.26122 3 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 4 3.41129 0.13284 3.46167 2.81309 4 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 5 3.06955 2.58301 3.11843 0.18178 5 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 6 3.41129 0.13284 3.46167 2.81309 6 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 7 3.06955 2.58301 3.11843 0.18178 7 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 8 2.93428 3.56852 0.11929 3.47120 8 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 9 3.41129 0.13284 3.46167 2.81309 9 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 10 0.14442 3.36134 2.78962 3.26122 10 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 11 3.41129 0.13284 3.46167 2.81309 11 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 12 2.93428 3.56852 0.11929 3.47120 12 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 13 2.93428 3.56852 0.11929 3.47120 13 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 14 3.06955 2.58301 3.11843 0.18178 14 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 15 2.93428 3.56852 0.11929 3.47120 15 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 16 1.52120 2.73041 0.44409 2.59090 16 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 17 0.14442 3.36134 2.78962 3.26122 17 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 18 3.06955 2.58301 3.11843 0.18178 18 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 19 3.41129 0.13284 3.46167 2.81309 19 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 20 3.06955 2.58301 3.11843 0.18178 20 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 21 3.41129 0.13284 3.46167 2.81309 21 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 22 3.06955 2.58301 3.11843 0.18178 22 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 23 3.41129 0.13284 3.46167 2.81309 23 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 24 2.93428 3.56852 0.11929 3.47120 24 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 25 2.93428 3.56852 0.11929 3.47120 25 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 26 3.41129 0.13284 3.46167 2.81309 26 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 27 3.06955 2.58301 3.11843 0.18178 27 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 28 3.41129 0.13284 3.46167 2.81309 28 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 29 2.93428 3.56852 0.11929 3.47120 29 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 30 3.41129 0.13284 3.46167 2.81309 30 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 31 2.93428 3.56852 0.11929 3.47120 31 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 32 3.41129 0.13284 3.46167 2.81309 32 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 33 0.14442 3.36134 2.78962 3.26122 33 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 34 3.06955 2.58301 3.11843 0.18178 34 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 35 3.41129 0.13284 3.46167 2.81309 35 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 36 2.93428 3.56852 0.11929 3.47120 36 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 37 0.14442 3.36134 2.78962 3.26122 37 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 38 3.06955 2.58301 3.11843 0.18178 38 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 39 2.93428 3.56852 0.11929 3.47120 39 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 40 0.14442 3.36134 2.78962 3.26122 40 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 41 0.14442 3.36134 2.78962 3.26122 41 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 42 2.93428 3.56852 0.11929 3.47120 42 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 43 0.14442 3.36134 2.78962 3.26122 43 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 44 0.14442 3.36134 2.78962 3.26122 44 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547 45 3.41129 0.13284 3.46167 2.81309 45 - - 1.38629 1.38629 1.38629 1.38629 0.01882 3.98232 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirtyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:37 2012 NSEQ 2 EFFN 2.000000 CKSUM 1046995822 STATS LOCAL MSV -7.5868 0.72754 STATS LOCAL VITERBI -8.1846 0.72754 STATS LOCAL FORWARD -3.1677 0.72754 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59609 1.19386 1.27094 1.54321 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirtyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:43 2012 NSEQ 5 EFFN 3.129883 CKSUM 4096650600 STATS LOCAL MSV -8.1750 0.71933 STATS LOCAL VITERBI -7.7706 0.71933 STATS LOCAL FORWARD -3.7607 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63938 1.10429 1.26146 1.65438 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 0.00000 * 1 3.02470 2.55440 3.07528 0.18933 1 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 2 3.35951 0.13934 3.41202 2.77509 2 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 3 2.90252 3.52266 0.12454 3.42069 3 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 4 3.35951 0.13934 3.41202 2.77509 4 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 5 3.02470 2.55440 3.07528 0.18933 5 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 6 3.35951 0.13934 3.41202 2.77509 6 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 7 3.35951 0.13934 3.41202 2.77509 7 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 8 2.90252 3.52266 0.12454 3.42069 8 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 9 3.35951 0.13934 3.41202 2.77509 9 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 10 0.15061 3.31651 2.76031 3.21221 10 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 11 3.35951 0.13934 3.41202 2.77509 11 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 12 2.90252 3.52266 0.12454 3.42069 12 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 13 2.90252 3.52266 0.12454 3.42069 13 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 14 3.02470 2.55440 3.07528 0.18933 14 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 15 2.90252 3.52266 0.12454 3.42069 15 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 16 2.90252 3.52266 0.12454 3.42069 16 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 17 0.15061 3.31651 2.76031 3.21221 17 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 18 3.02470 2.55440 3.07528 0.18933 18 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 19 3.35951 0.13934 3.41202 2.77509 19 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 20 3.02470 2.55440 3.07528 0.18933 20 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 21 3.35951 0.13934 3.41202 2.77509 21 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 22 3.02470 2.55440 3.07528 0.18933 22 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 23 3.35951 0.13934 3.41202 2.77509 23 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 24 2.90252 3.52266 0.12454 3.42069 24 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 25 2.90252 3.52266 0.12454 3.42069 25 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 26 3.35951 0.13934 3.41202 2.77509 26 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 27 3.02470 2.55440 3.07528 0.18933 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 28 3.35951 0.13934 3.41202 2.77509 28 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 29 2.90252 3.52266 0.12454 3.42069 29 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 30 3.35951 0.13934 3.41202 2.77509 30 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 31 2.90252 3.52266 0.12454 3.42069 31 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 32 3.35951 0.13934 3.41202 2.77509 32 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 33 0.15061 3.31651 2.76031 3.21221 33 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 34 3.02470 2.55440 3.07528 0.18933 34 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 35 3.35951 0.13934 3.41202 2.77509 35 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 36 2.90252 3.52266 0.12454 3.42069 36 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 37 0.15061 3.31651 2.76031 3.21221 37 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 38 3.35951 0.13934 3.41202 2.77509 38 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 39 2.90252 3.52266 0.12454 3.42069 39 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 40 0.15061 3.31651 2.76031 3.21221 40 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 41 0.15061 3.31651 2.76031 3.21221 41 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 42 2.90252 3.52266 0.12454 3.42069 42 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 43 0.15061 3.31651 2.76031 3.21221 43 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 44 0.15061 3.31651 2.76031 3.21221 44 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 45 3.35951 0.13934 3.41202 2.77509 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95697 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:29:03 2012 NSEQ 48 EFFN 3.647461 CKSUM 4032312740 STATS LOCAL MSV -7.4786 0.71932 STATS LOCAL VITERBI -7.7717 0.71932 STATS LOCAL FORWARD -3.9630 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.04914 1.61632 1.50702 1.47158 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 0.00000 * 1 0.12954 3.47883 2.86559 3.38999 1 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 2 2.41031 3.38048 0.17632 3.27461 2 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 3 0.12954 3.47883 2.86559 3.38999 3 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 4 3.54628 0.11749 3.59080 2.91069 4 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 5 3.18923 2.65900 3.23350 0.16327 5 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 6 3.54628 0.11749 3.59080 2.91069 6 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 7 0.12954 3.47883 2.86559 3.38999 7 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 8 0.12954 3.47883 2.86559 3.38999 8 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 9 3.18923 2.65900 3.23350 0.16327 9 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 10 0.16654 3.33925 2.54021 3.24169 10 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 11 3.18923 2.65900 3.23350 0.16327 11 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 12 3.01510 3.68679 0.10688 3.60196 12 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 13 3.01510 3.68679 0.10688 3.60196 13 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 14 2.02112 3.12880 0.25580 3.00727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 15 3.01510 3.68679 0.10688 3.60196 15 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 16 3.01510 3.68679 0.10688 3.60196 16 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 17 0.12954 3.47883 2.86559 3.38999 17 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 18 3.18923 2.65900 3.23350 0.16327 18 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 19 3.54628 0.11749 3.59080 2.91069 19 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 20 0.12954 3.47883 2.86559 3.38999 20 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 21 3.54628 0.11749 3.59080 2.91069 21 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 22 3.18923 2.65900 3.23350 0.16327 22 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 23 3.18923 2.65900 3.23350 0.16327 23 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 24 0.12954 3.47883 2.86559 3.38999 24 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 25 3.01510 3.68679 0.10688 3.60196 25 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 26 3.18923 2.65900 3.23350 0.16327 26 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 27 3.54628 0.11749 3.59080 2.91069 27 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 28 3.54628 0.11749 3.59080 2.91069 28 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 29 3.05688 2.33574 3.10645 0.20891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 30 3.18923 2.65900 3.23350 0.16327 30 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 31 0.23754 3.03409 2.32699 2.72222 31 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 32 0.21364 3.18940 2.25141 3.08099 32 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 33 0.12954 3.47883 2.86559 3.38999 33 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 34 2.02083 2.14463 1.31013 0.73281 34 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 35 3.54628 0.11749 3.59080 2.91069 35 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 36 3.01510 3.68679 0.10688 3.60196 36 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 37 0.12954 3.47883 2.86559 3.38999 37 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 38 3.18923 2.65900 3.23350 0.16327 38 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 39 3.01510 3.68679 0.10688 3.60196 39 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 40 0.12954 3.47883 2.86559 3.38999 40 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 41 0.12954 3.47883 2.86559 3.38999 41 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 42 0.12954 3.47883 2.86559 3.38999 42 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 43 0.12954 3.47883 2.86559 3.38999 43 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 44 0.12954 3.47883 2.86559 3.38999 44 - - 1.38629 1.38629 1.38629 1.38629 0.03480 4.06859 4.06859 1.46634 0.26236 1.09861 0.40547 45 3.54628 0.11749 3.59080 2.91069 45 - - 1.38629 1.38629 1.38629 1.38629 0.01755 4.05134 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:55 2012 NSEQ 3 EFFN 3.000000 CKSUM 879315818 STATS LOCAL MSV -8.1527 0.71989 STATS LOCAL VITERBI -7.7905 0.71989 STATS LOCAL FORWARD -3.8287 0.71989 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63033 1.27343 1.14436 1.58067 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:04 2012 NSEQ 9 EFFN 3.440918 CKSUM 1294574687 STATS LOCAL MSV -7.3109 0.71933 STATS LOCAL VITERBI -7.6663 0.71933 STATS LOCAL FORWARD -4.3716 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46775 1.47309 1.24708 1.37438 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 0.00000 * 1 3.47583 0.12523 3.52346 2.85999 1 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 2 3.12623 2.61905 3.17294 0.17273 2 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 3 0.13709 3.41738 2.82598 3.32258 3 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 4 2.97325 3.62528 0.11314 3.53388 4 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 5 2.52215 1.34100 2.59044 0.53933 5 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 6 2.51499 0.60153 2.58667 1.21776 6 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 7 3.12623 2.61905 3.17294 0.17273 7 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 8 3.12623 2.61905 3.17294 0.17273 8 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 9 0.13709 3.41738 2.82598 3.32258 9 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 10 3.12623 2.61905 3.17294 0.17273 10 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 11 3.47583 0.12523 3.52346 2.85999 11 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 12 2.97325 3.62528 0.11314 3.53388 12 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 13 2.97325 3.62528 0.11314 3.53388 13 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 14 3.12623 2.61905 3.17294 0.17273 14 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 15 2.97325 3.62528 0.11314 3.53388 15 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 16 2.97325 3.62528 0.11314 3.53388 16 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 17 0.13709 3.41738 2.82598 3.32258 17 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 18 3.12623 2.61905 3.17294 0.17273 18 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 19 3.47583 0.12523 3.52346 2.85999 19 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 20 0.13709 3.41738 2.82598 3.32258 20 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 21 3.47583 0.12523 3.52346 2.85999 21 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 22 3.12623 2.61905 3.17294 0.17273 22 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 23 3.47583 0.12523 3.52346 2.85999 23 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 24 2.97325 3.62528 0.11314 3.53388 24 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 25 2.97325 3.62528 0.11314 3.53388 25 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 26 3.47583 0.12523 3.52346 2.85999 26 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 27 3.12623 2.61905 3.17294 0.17273 27 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 28 3.47583 0.12523 3.52346 2.85999 28 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 29 2.97325 3.62528 0.11314 3.53388 29 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 30 3.12623 2.61905 3.17294 0.17273 30 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 31 0.13709 3.41738 2.82598 3.32258 31 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 32 2.97325 3.62528 0.11314 3.53388 32 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 33 2.97325 3.62528 0.11314 3.53388 33 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 34 3.12623 2.61905 3.17294 0.17273 34 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 35 3.47583 0.12523 3.52346 2.85999 35 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 36 2.97325 3.62528 0.11314 3.53388 36 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 37 0.13709 3.41738 2.82598 3.32258 37 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 38 3.12623 2.61905 3.17294 0.17273 38 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 39 2.97325 3.62528 0.11314 3.53388 39 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 40 0.13709 3.41738 2.82598 3.32258 40 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 41 0.13709 3.41738 2.82598 3.32258 41 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 42 2.97325 3.62528 0.11314 3.53388 42 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 43 0.13709 3.41738 2.82598 3.32258 43 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 44 0.13709 3.41738 2.82598 3.32258 44 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 45 3.47583 0.12523 3.52346 2.85999 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01475 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:09 2012 NSEQ 11 EFFN 3.305908 CKSUM 1468312356 STATS LOCAL MSV -8.0909 0.71933 STATS LOCAL VITERBI -7.7497 0.71933 STATS LOCAL FORWARD -4.1867 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47160 1.44665 1.25108 1.39075 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 0.00000 * 1 3.42690 0.13095 3.47662 2.82448 1 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 2 3.08318 2.59169 3.13154 0.17955 2 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 3 0.14261 3.37488 2.79843 3.27603 3 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 4 2.94377 3.58229 0.11776 3.48639 4 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 5 2.56468 1.50508 2.63123 0.46352 5 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 6 3.42690 0.13095 3.47662 2.82448 6 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 7 3.08318 2.59169 3.13154 0.17955 7 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 8 3.08318 2.59169 3.13154 0.17955 8 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 9 0.14261 3.37488 2.79843 3.27603 9 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 10 3.08318 2.59169 3.13154 0.17955 10 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 11 3.42690 0.13095 3.47662 2.82448 11 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 12 2.94377 3.58229 0.11776 3.48639 12 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 13 2.94377 3.58229 0.11776 3.48639 13 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 14 3.08318 2.59169 3.13154 0.17955 14 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 15 2.94377 3.58229 0.11776 3.48639 15 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 16 2.94377 3.58229 0.11776 3.48639 16 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 17 0.14261 3.37488 2.79843 3.27603 17 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 18 3.08318 2.59169 3.13154 0.17955 18 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 19 3.42690 0.13095 3.47662 2.82448 19 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 20 0.14261 3.37488 2.79843 3.27603 20 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 21 3.42690 0.13095 3.47662 2.82448 21 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 22 3.08318 2.59169 3.13154 0.17955 22 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 23 3.42690 0.13095 3.47662 2.82448 23 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 24 2.94377 3.58229 0.11776 3.48639 24 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 25 2.94377 3.58229 0.11776 3.48639 25 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 26 3.42690 0.13095 3.47662 2.82448 26 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 27 3.08318 2.59169 3.13154 0.17955 27 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 28 3.42690 0.13095 3.47662 2.82448 28 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 29 2.94377 3.58229 0.11776 3.48639 29 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 30 3.08318 2.59169 3.13154 0.17955 30 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 31 2.94377 3.58229 0.11776 3.48639 31 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 32 2.94377 3.58229 0.11776 3.48639 32 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 33 0.14261 3.37488 2.79843 3.27603 33 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 34 3.08318 2.59169 3.13154 0.17955 34 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 35 3.42690 0.13095 3.47662 2.82448 35 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 36 2.94377 3.58229 0.11776 3.48639 36 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 37 0.14261 3.37488 2.79843 3.27603 37 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 38 3.08318 2.59169 3.13154 0.17955 38 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 39 2.94377 3.58229 0.11776 3.48639 39 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 40 0.14261 3.37488 2.79843 3.27603 40 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 41 0.14261 3.37488 2.79843 3.27603 41 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 42 2.94377 3.58229 0.11776 3.48639 42 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 43 0.14261 3.37488 2.79843 3.27603 43 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 44 0.14261 3.37488 2.79843 3.27603 44 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00841 4.00841 1.46634 0.26236 1.09861 0.40547 45 3.42690 0.13095 3.47662 2.82448 45 - - 1.38629 1.38629 1.38629 1.38629 0.01867 3.99008 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:16 2012 NSEQ 2 EFFN 2.000000 CKSUM 2545387361 STATS LOCAL MSV -7.5549 0.72799 STATS LOCAL VITERBI -8.0703 0.72799 STATS LOCAL FORWARD -3.5515 0.72799 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45791 1.39682 1.31896 1.37642 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threed_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:21 2012 NSEQ 45 EFFN 3.683167 CKSUM 4010874590 STATS LOCAL MSV -7.4061 0.71931 STATS LOCAL VITERBI -7.6816 0.71931 STATS LOCAL FORWARD -4.2977 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.49218 1.44109 1.26114 1.36603 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 0.00000 * 1 3.55794 0.11626 3.60194 2.91903 1 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 2 2.07066 2.41571 2.68444 0.33361 2 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 3 0.12833 3.48903 2.87216 3.40119 3 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 4 2.91264 3.46927 0.13977 3.10184 4 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 5 2.97042 2.13237 3.02366 0.24649 5 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 6 3.55794 0.11626 3.60194 2.91903 6 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 7 3.19979 2.66569 3.24363 0.16175 7 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 8 3.19979 2.66569 3.24363 0.16175 8 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 9 0.12833 3.48903 2.87216 3.40119 9 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 10 3.19979 2.66569 3.24363 0.16175 10 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 11 3.55794 0.11626 3.60194 2.91903 11 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 12 3.02197 3.69692 0.10588 3.61320 12 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 13 3.02197 3.69692 0.10588 3.61320 13 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 14 3.19979 2.66569 3.24363 0.16175 14 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 15 3.02197 3.69692 0.10588 3.61320 15 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 16 3.02197 3.69692 0.10588 3.61320 16 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 17 0.12833 3.48903 2.87216 3.40119 17 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 18 3.19979 2.66569 3.24363 0.16175 18 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 19 3.55794 0.11626 3.60194 2.91903 19 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 20 0.12833 3.48903 2.87216 3.40119 20 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 21 3.55794 0.11626 3.60194 2.91903 21 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 22 3.19979 2.66569 3.24363 0.16175 22 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 23 3.55794 0.11626 3.60194 2.91903 23 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 24 3.02197 3.69692 0.10588 3.61320 24 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 25 3.02197 3.69692 0.10588 3.61320 25 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 26 3.55794 0.11626 3.60194 2.91903 26 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 27 3.19979 2.66569 3.24363 0.16175 27 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 28 3.55794 0.11626 3.60194 2.91903 28 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 29 3.02197 3.69692 0.10588 3.61320 29 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 30 3.11654 2.45448 3.16369 0.18933 30 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 31 0.75718 2.58056 0.99991 2.43760 31 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 32 3.02197 3.69692 0.10588 3.61320 32 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 33 1.66714 2.17550 0.79154 1.40848 33 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 34 3.19979 2.66569 3.24363 0.16175 34 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 35 3.55794 0.11626 3.60194 2.91903 35 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 36 3.02197 3.69692 0.10588 3.61320 36 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 37 0.12833 3.48903 2.87216 3.40119 37 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 38 3.19979 2.66569 3.24363 0.16175 38 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 39 3.02197 3.69692 0.10588 3.61320 39 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 40 0.12833 3.48903 2.87216 3.40119 40 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 41 0.12833 3.48903 2.87216 3.40119 41 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 42 3.02197 3.69692 0.10588 3.61320 42 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 43 0.12833 3.48903 2.87216 3.40119 43 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 44 0.12833 3.48903 2.87216 3.40119 44 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07468 4.07468 1.46634 0.26236 1.09861 0.40547 45 3.55794 0.11626 3.60194 2.91903 45 - - 1.38629 1.38629 1.38629 1.38629 0.01744 4.05754 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:26 2012 NSEQ 11 EFFN 3.246826 CKSUM 1748157936 STATS LOCAL MSV -7.9085 0.71932 STATS LOCAL VITERBI -7.7074 0.71932 STATS LOCAL FORWARD -4.1988 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40311 1.45887 1.31500 1.37360 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 0.00000 * 1 3.40474 0.13364 3.45540 2.80830 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 2 3.06385 2.57938 3.11295 0.18272 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 3 0.14519 3.35567 2.78592 3.25501 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 4 0.14519 3.35567 2.78592 3.25501 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 5 3.06385 2.57938 3.11295 0.18272 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 6 3.40474 0.13364 3.45540 2.80830 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 7 3.06385 2.57938 3.11295 0.18272 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 8 3.06385 2.57938 3.11295 0.18272 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 9 0.14519 3.35567 2.78592 3.25501 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 10 3.06385 2.57938 3.11295 0.18272 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 11 3.40474 0.13364 3.45540 2.80830 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 12 2.93029 3.56274 0.11993 3.46483 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 13 2.93029 3.56274 0.11993 3.46483 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 14 3.06385 2.57938 3.11295 0.18272 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 15 2.93029 3.56274 0.11993 3.46483 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 16 2.93029 3.56274 0.11993 3.46483 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 17 0.14519 3.35567 2.78592 3.25501 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 18 3.06385 2.57938 3.11295 0.18272 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 19 3.40474 0.13364 3.45540 2.80830 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 20 0.14519 3.35567 2.78592 3.25501 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 21 3.40474 0.13364 3.45540 2.80830 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 22 3.06385 2.57938 3.11295 0.18272 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 23 3.40474 0.13364 3.45540 2.80830 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 24 2.93029 3.56274 0.11993 3.46483 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 25 2.93029 3.56274 0.11993 3.46483 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 26 3.40474 0.13364 3.45540 2.80830 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 27 3.06385 2.57938 3.11295 0.18272 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 28 3.40474 0.13364 3.45540 2.80830 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 29 2.93029 3.56274 0.11993 3.46483 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 30 3.06385 2.57938 3.11295 0.18272 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 31 2.93029 3.56274 0.11993 3.46483 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 32 2.93029 3.56274 0.11993 3.46483 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 33 2.93029 3.56274 0.11993 3.46483 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 34 3.06385 2.57938 3.11295 0.18272 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 35 3.40474 0.13364 3.45540 2.80830 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 36 2.93029 3.56274 0.11993 3.46483 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 37 0.14519 3.35567 2.78592 3.25501 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 38 3.06385 2.57938 3.11295 0.18272 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 39 0.14519 3.35567 2.78592 3.25501 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 40 0.14519 3.35567 2.78592 3.25501 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 41 0.14519 3.35567 2.78592 3.25501 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 42 2.93029 3.56274 0.11993 3.46483 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 43 0.14519 3.35567 2.78592 3.25501 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 44 0.14519 3.35567 2.78592 3.25501 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99762 3.99762 1.46634 0.26236 1.09861 0.40547 45 3.40474 0.13364 3.45540 2.80830 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97909 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:31 2012 NSEQ 6 EFFN 3.260742 CKSUM 2895050922 STATS LOCAL MSV -8.0239 0.71933 STATS LOCAL VITERBI -7.6662 0.71933 STATS LOCAL FORWARD -4.3060 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47461 1.45532 1.31571 1.31109 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 0.00000 * 1 3.41001 0.13300 3.46044 2.81215 1 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 2 3.06843 2.58230 3.11735 0.18196 2 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 3 0.14457 3.36023 2.78889 3.26000 3 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 4 2.93350 3.56738 0.11941 3.46995 4 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 5 3.06843 2.58230 3.11735 0.18196 5 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 6 3.41001 0.13300 3.46044 2.81215 6 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 7 3.06843 2.58230 3.11735 0.18196 7 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 8 3.06843 2.58230 3.11735 0.18196 8 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 9 0.14457 3.36023 2.78889 3.26000 9 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 10 3.06843 2.58230 3.11735 0.18196 10 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 11 3.41001 0.13300 3.46044 2.81215 11 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 12 2.93350 3.56738 0.11941 3.46995 12 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 13 2.93350 3.56738 0.11941 3.46995 13 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 14 3.06843 2.58230 3.11735 0.18196 14 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 15 2.93350 3.56738 0.11941 3.46995 15 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 16 2.93350 3.56738 0.11941 3.46995 16 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 17 0.14457 3.36023 2.78889 3.26000 17 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 18 3.06843 2.58230 3.11735 0.18196 18 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 19 3.41001 0.13300 3.46044 2.81215 19 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 20 0.14457 3.36023 2.78889 3.26000 20 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 21 3.41001 0.13300 3.46044 2.81215 21 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 22 3.06843 2.58230 3.11735 0.18196 22 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 23 3.41001 0.13300 3.46044 2.81215 23 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 24 2.93350 3.56738 0.11941 3.46995 24 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 25 2.93350 3.56738 0.11941 3.46995 25 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 26 3.41001 0.13300 3.46044 2.81215 26 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 27 3.06843 2.58230 3.11735 0.18196 27 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 28 3.41001 0.13300 3.46044 2.81215 28 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 29 2.93350 3.56738 0.11941 3.46995 29 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 30 3.06843 2.58230 3.11735 0.18196 30 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 31 0.14457 3.36023 2.78889 3.26000 31 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 32 2.93350 3.56738 0.11941 3.46995 32 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 33 3.06843 2.58230 3.11735 0.18196 33 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 34 3.06843 2.58230 3.11735 0.18196 34 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 35 3.41001 0.13300 3.46044 2.81215 35 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 36 2.93350 3.56738 0.11941 3.46995 36 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 37 0.14457 3.36023 2.78889 3.26000 37 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 38 3.06843 2.58230 3.11735 0.18196 38 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 39 2.93350 3.56738 0.11941 3.46995 39 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 40 0.14457 3.36023 2.78889 3.26000 40 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 41 0.14457 3.36023 2.78889 3.26000 41 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 42 2.93350 3.56738 0.11941 3.46995 42 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 43 0.14457 3.36023 2.78889 3.26000 43 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 44 0.14457 3.36023 2.78889 3.26000 44 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547 45 3.41001 0.13300 3.46044 2.81215 45 - - 1.38629 1.38629 1.38629 1.38629 0.01883 3.98169 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threeg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:36 2012 NSEQ 4 EFFN 3.246094 CKSUM 3441283875 STATS LOCAL MSV -7.9932 0.71931 STATS LOCAL VITERBI -7.7567 0.71931 STATS LOCAL FORWARD -4.3175 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54718 1.53589 1.19538 1.31193 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 * 1 3.06361 2.57923 3.11272 0.18276 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 2 3.06361 2.57923 3.11272 0.18276 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 3 0.14522 3.35543 2.78576 3.25475 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 4 0.14522 3.35543 2.78576 3.25475 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 5 3.06361 2.57923 3.11272 0.18276 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 6 3.40447 0.13368 3.45513 2.80810 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 7 3.06361 2.57923 3.11272 0.18276 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 8 3.06361 2.57923 3.11272 0.18276 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 9 0.14522 3.35543 2.78576 3.25475 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 10 3.06361 2.57923 3.11272 0.18276 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 11 3.40447 0.13368 3.45513 2.80810 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 12 2.93012 3.56249 0.11996 3.46456 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 13 2.93012 3.56249 0.11996 3.46456 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 14 3.06361 2.57923 3.11272 0.18276 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 15 2.93012 3.56249 0.11996 3.46456 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 16 2.93012 3.56249 0.11996 3.46456 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 17 0.14522 3.35543 2.78576 3.25475 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 18 3.06361 2.57923 3.11272 0.18276 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 19 3.40447 0.13368 3.45513 2.80810 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 20 0.14522 3.35543 2.78576 3.25475 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 21 3.40447 0.13368 3.45513 2.80810 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 22 3.06361 2.57923 3.11272 0.18276 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 23 3.40447 0.13368 3.45513 2.80810 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 24 2.93012 3.56249 0.11996 3.46456 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 25 2.93012 3.56249 0.11996 3.46456 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 26 3.40447 0.13368 3.45513 2.80810 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 27 3.06361 2.57923 3.11272 0.18276 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 28 3.40447 0.13368 3.45513 2.80810 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 29 2.93012 3.56249 0.11996 3.46456 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 30 3.06361 2.57923 3.11272 0.18276 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 31 2.93012 3.56249 0.11996 3.46456 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 32 2.93012 3.56249 0.11996 3.46456 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 33 2.93012 3.56249 0.11996 3.46456 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 34 3.06361 2.57923 3.11272 0.18276 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 35 3.40447 0.13368 3.45513 2.80810 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 36 2.93012 3.56249 0.11996 3.46456 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 37 0.14522 3.35543 2.78576 3.25475 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 38 3.06361 2.57923 3.11272 0.18276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 39 2.93012 3.56249 0.11996 3.46456 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 40 0.14522 3.35543 2.78576 3.25475 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 41 0.14522 3.35543 2.78576 3.25475 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 42 2.93012 3.56249 0.11996 3.46456 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 43 0.14522 3.35543 2.78576 3.25475 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 44 2.93012 3.56249 0.11996 3.46456 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 45 3.40447 0.13368 3.45513 2.80810 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97895 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threeh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:40 2012 NSEQ 4 EFFN 3.269531 CKSUM 1714705976 STATS LOCAL MSV -7.9738 0.71932 STATS LOCAL VITERBI -7.6259 0.71932 STATS LOCAL FORWARD -4.2493 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40268 1.53488 1.31339 1.31054 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 * 1 3.07131 2.58413 3.12013 0.18149 1 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 2 3.07131 2.58413 3.12013 0.18149 2 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 3 0.14418 3.36310 2.79076 3.26314 3 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 4 2.93551 3.57031 0.11909 3.47317 4 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 5 3.07131 2.58413 3.12013 0.18149 5 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 6 3.41331 0.13259 3.46361 2.81457 6 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 7 3.07131 2.58413 3.12013 0.18149 7 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 8 3.07131 2.58413 3.12013 0.18149 8 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 9 0.14418 3.36310 2.79076 3.26314 9 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 10 3.07131 2.58413 3.12013 0.18149 10 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 11 3.41331 0.13259 3.46361 2.81457 11 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 12 2.93551 3.57031 0.11909 3.47317 12 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 13 2.93551 3.57031 0.11909 3.47317 13 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 14 3.07131 2.58413 3.12013 0.18149 14 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 15 2.93551 3.57031 0.11909 3.47317 15 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 16 2.93551 3.57031 0.11909 3.47317 16 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 17 0.14418 3.36310 2.79076 3.26314 17 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 18 3.07131 2.58413 3.12013 0.18149 18 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 19 3.41331 0.13259 3.46361 2.81457 19 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 20 0.14418 3.36310 2.79076 3.26314 20 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 21 3.41331 0.13259 3.46361 2.81457 21 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 22 3.07131 2.58413 3.12013 0.18149 22 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 23 3.41331 0.13259 3.46361 2.81457 23 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 24 2.93551 3.57031 0.11909 3.47317 24 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 25 2.93551 3.57031 0.11909 3.47317 25 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 26 3.41331 0.13259 3.46361 2.81457 26 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 27 3.07131 2.58413 3.12013 0.18149 27 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 28 3.41331 0.13259 3.46361 2.81457 28 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 29 2.93551 3.57031 0.11909 3.47317 29 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 30 3.07131 2.58413 3.12013 0.18149 30 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 31 0.14418 3.36310 2.79076 3.26314 31 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 32 2.93551 3.57031 0.11909 3.47317 32 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 33 0.14418 3.36310 2.79076 3.26314 33 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 34 3.07131 2.58413 3.12013 0.18149 34 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 35 3.41331 0.13259 3.46361 2.81457 35 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 36 2.93551 3.57031 0.11909 3.47317 36 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 37 0.14418 3.36310 2.79076 3.26314 37 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 38 3.07131 2.58413 3.12013 0.18149 38 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 39 2.93551 3.57031 0.11909 3.47317 39 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 40 0.14418 3.36310 2.79076 3.26314 40 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 41 0.14418 3.36310 2.79076 3.26314 41 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 42 2.93551 3.57031 0.11909 3.47317 42 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 43 0.14418 3.36310 2.79076 3.26314 43 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 44 0.14418 3.36310 2.79076 3.26314 44 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 45 3.41331 0.13259 3.46361 2.81457 45 - - 1.38629 1.38629 1.38629 1.38629 0.01880 3.98333 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:45 2012 NSEQ 4 EFFN 3.285156 CKSUM 3641792887 STATS LOCAL MSV -7.9429 0.71931 STATS LOCAL VITERBI -7.7130 0.71931 STATS LOCAL FORWARD -4.1718 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33712 1.53172 1.37863 1.31189 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 * 1 3.41917 0.13188 3.46922 2.81884 1 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 2 3.07642 2.58739 3.12504 0.18065 2 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 3 0.14350 3.36817 2.79406 3.26870 3 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 4 2.93908 3.57547 0.11851 3.47887 4 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 5 3.07642 2.58739 3.12504 0.18065 5 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 6 3.41917 0.13188 3.46922 2.81884 6 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 7 3.07642 2.58739 3.12504 0.18065 7 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 8 3.07642 2.58739 3.12504 0.18065 8 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 9 0.14350 3.36817 2.79406 3.26870 9 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 10 3.07642 2.58739 3.12504 0.18065 10 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 11 3.41917 0.13188 3.46922 2.81884 11 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 12 2.93908 3.57547 0.11851 3.47887 12 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 13 2.93908 3.57547 0.11851 3.47887 13 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 14 3.07642 2.58739 3.12504 0.18065 14 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 15 2.93908 3.57547 0.11851 3.47887 15 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 16 2.93908 3.57547 0.11851 3.47887 16 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 17 0.14350 3.36817 2.79406 3.26870 17 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 18 3.07642 2.58739 3.12504 0.18065 18 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 19 3.41917 0.13188 3.46922 2.81884 19 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 20 0.14350 3.36817 2.79406 3.26870 20 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 21 3.41917 0.13188 3.46922 2.81884 21 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 22 3.07642 2.58739 3.12504 0.18065 22 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 23 3.41917 0.13188 3.46922 2.81884 23 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 24 2.93908 3.57547 0.11851 3.47887 24 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 25 2.93908 3.57547 0.11851 3.47887 25 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 26 3.07642 2.58739 3.12504 0.18065 26 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 27 3.07642 2.58739 3.12504 0.18065 27 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 28 3.41917 0.13188 3.46922 2.81884 28 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 29 0.14350 3.36817 2.79406 3.26870 29 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 30 3.07642 2.58739 3.12504 0.18065 30 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 31 0.14350 3.36817 2.79406 3.26870 31 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 32 2.93908 3.57547 0.11851 3.47887 32 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 33 0.14350 3.36817 2.79406 3.26870 33 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 34 3.07642 2.58739 3.12504 0.18065 34 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 35 3.41917 0.13188 3.46922 2.81884 35 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 36 2.93908 3.57547 0.11851 3.47887 36 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 37 0.14350 3.36817 2.79406 3.26870 37 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 38 3.07642 2.58739 3.12504 0.18065 38 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 39 2.93908 3.57547 0.11851 3.47887 39 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 40 0.14350 3.36817 2.79406 3.26870 40 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 41 0.14350 3.36817 2.79406 3.26870 41 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 42 2.93908 3.57547 0.11851 3.47887 42 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 43 0.14350 3.36817 2.79406 3.26870 43 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 44 0.14350 3.36817 2.79406 3.26870 44 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 45 3.41917 0.13188 3.46922 2.81884 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:14:51 2012 NSEQ 13 EFFN 3.526123 CKSUM 1276633975 STATS LOCAL MSV -7.3728 0.71932 STATS LOCAL VITERBI -7.7120 0.71932 STATS LOCAL FORWARD -4.2838 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65970 1.42943 1.18428 1.33031 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 0.00000 * 1 2.45176 1.04716 2.52278 0.72838 1 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 2 3.15264 2.63580 3.19832 0.16869 2 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 3 0.13385 3.44324 2.84268 3.35093 3 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 4 2.99096 3.65126 0.11044 3.56262 4 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 5 3.15264 2.63580 3.19832 0.16869 5 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 6 3.50552 0.12189 3.55185 2.88142 6 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 7 3.15264 2.63580 3.19832 0.16869 7 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 8 3.15264 2.63580 3.19832 0.16869 8 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 9 2.06638 3.13182 0.24789 3.01044 9 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 10 3.50552 0.12189 3.55185 2.88142 10 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 11 3.50552 0.12189 3.55185 2.88142 11 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 12 2.99096 3.65126 0.11044 3.56262 12 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 13 2.99096 3.65126 0.11044 3.56262 13 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 14 3.15264 2.63580 3.19832 0.16869 14 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 15 2.99096 3.65126 0.11044 3.56262 15 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 16 2.99096 3.65126 0.11044 3.56262 16 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 17 0.13385 3.44324 2.84268 3.35093 17 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 18 3.15264 2.63580 3.19832 0.16869 18 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 19 3.50552 0.12189 3.55185 2.88142 19 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 20 0.13385 3.44324 2.84268 3.35093 20 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 21 3.50552 0.12189 3.55185 2.88142 21 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 22 3.15264 2.63580 3.19832 0.16869 22 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 23 3.50552 0.12189 3.55185 2.88142 23 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 24 2.99096 3.65126 0.11044 3.56262 24 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 25 2.99096 3.65126 0.11044 3.56262 25 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 26 3.50552 0.12189 3.55185 2.88142 26 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 27 3.15264 2.63580 3.19832 0.16869 27 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 28 3.50552 0.12189 3.55185 2.88142 28 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 29 2.99096 3.65126 0.11044 3.56262 29 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 30 3.15264 2.63580 3.19832 0.16869 30 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 31 0.60052 2.60773 1.22791 2.46665 31 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 32 2.99096 3.65126 0.11044 3.56262 32 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 33 2.99096 3.65126 0.11044 3.56262 33 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 34 3.15264 2.63580 3.19832 0.16869 34 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 35 3.50552 0.12189 3.55185 2.88142 35 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 36 2.99096 3.65126 0.11044 3.56262 36 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 37 0.13385 3.44324 2.84268 3.35093 37 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 38 3.15264 2.63580 3.19832 0.16869 38 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 39 2.99096 3.65126 0.11044 3.56262 39 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 40 0.13385 3.44324 2.84268 3.35093 40 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 41 0.13385 3.44324 2.84268 3.35093 41 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 42 2.99096 3.65126 0.11044 3.56262 42 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 43 0.13385 3.44324 2.84268 3.35093 43 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 44 3.15264 2.63580 3.19832 0.16869 44 - - 1.38629 1.38629 1.38629 1.38629 0.03555 4.04762 4.04762 1.46634 0.26236 1.09861 0.40547 45 3.50552 0.12189 3.55185 2.88142 45 - - 1.38629 1.38629 1.38629 1.38629 0.01793 4.03001 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:15:00 2012 NSEQ 7 EFFN 3.236816 CKSUM 408270587 STATS LOCAL MSV -8.0805 0.71933 STATS LOCAL VITERBI -7.6899 0.71933 STATS LOCAL FORWARD -4.3059 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47561 1.38702 1.31668 1.37231 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 0.00000 * 1 3.40094 0.13411 3.45175 2.80552 1 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 2 3.06055 2.57727 3.10977 0.18327 2 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 3 0.14563 3.35238 2.78377 3.25141 3 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 4 2.92797 3.55938 0.12031 3.46113 4 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 5 3.40094 0.13411 3.45175 2.80552 5 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 6 3.40094 0.13411 3.45175 2.80552 6 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 7 3.06055 2.57727 3.10977 0.18327 7 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 8 3.06055 2.57727 3.10977 0.18327 8 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 9 0.14563 3.35238 2.78377 3.25141 9 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 10 3.06055 2.57727 3.10977 0.18327 10 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 11 3.40094 0.13411 3.45175 2.80552 11 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 12 2.92797 3.55938 0.12031 3.46113 12 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 13 2.92797 3.55938 0.12031 3.46113 13 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 14 3.06055 2.57727 3.10977 0.18327 14 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 15 2.92797 3.55938 0.12031 3.46113 15 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 16 2.92797 3.55938 0.12031 3.46113 16 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 17 0.14563 3.35238 2.78377 3.25141 17 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 18 3.06055 2.57727 3.10977 0.18327 18 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 19 3.40094 0.13411 3.45175 2.80552 19 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 20 0.14563 3.35238 2.78377 3.25141 20 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 21 3.40094 0.13411 3.45175 2.80552 21 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 22 3.06055 2.57727 3.10977 0.18327 22 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 23 3.40094 0.13411 3.45175 2.80552 23 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 24 2.92797 3.55938 0.12031 3.46113 24 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 25 2.92797 3.55938 0.12031 3.46113 25 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 26 3.40094 0.13411 3.45175 2.80552 26 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 27 3.06055 2.57727 3.10977 0.18327 27 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 28 3.40094 0.13411 3.45175 2.80552 28 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 29 2.92797 3.55938 0.12031 3.46113 29 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 30 3.06055 2.57727 3.10977 0.18327 30 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 31 0.14563 3.35238 2.78377 3.25141 31 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 32 2.92797 3.55938 0.12031 3.46113 32 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 33 3.06055 2.57727 3.10977 0.18327 33 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 34 3.06055 2.57727 3.10977 0.18327 34 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 35 3.40094 0.13411 3.45175 2.80552 35 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 36 2.92797 3.55938 0.12031 3.46113 36 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 37 0.14563 3.35238 2.78377 3.25141 37 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 38 3.06055 2.57727 3.10977 0.18327 38 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 39 2.92797 3.55938 0.12031 3.46113 39 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 40 0.14563 3.35238 2.78377 3.25141 40 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 41 0.14563 3.35238 2.78377 3.25141 41 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 42 2.92797 3.55938 0.12031 3.46113 42 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 43 0.14563 3.35238 2.78377 3.25141 43 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 44 0.14563 3.35238 2.78377 3.25141 44 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99578 3.99578 1.46634 0.26236 1.09861 0.40547 45 3.40094 0.13411 3.45175 2.80552 45 - - 1.38629 1.38629 1.38629 1.38629 0.01892 3.97721 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_threel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:15:05 2012 NSEQ 25 EFFN 4.135132 CKSUM 2110423648 STATS LOCAL MSV -6.6693 0.71932 STATS LOCAL VITERBI -7.6515 0.71932 STATS LOCAL FORWARD -4.2746 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45592 1.47226 1.24572 1.38760 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 0.00000 * 1 2.75651 1.52436 2.81926 0.41691 1 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 2 2.63176 0.58501 2.70182 1.19117 2 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 3 0.11510 3.60848 2.94886 3.53248 3 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 4 2.65467 2.97644 0.26677 2.18167 4 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 5 2.58086 1.11840 2.64957 0.64092 5 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 6 3.69346 0.10301 3.73121 3.01519 6 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 7 3.10767 2.20433 3.15658 0.22015 7 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 8 3.32527 2.74533 3.36417 0.14477 8 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 9 0.17998 3.25332 2.79731 2.73200 9 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 10 2.70488 0.49385 2.77382 1.34543 10 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 11 3.69346 0.10301 3.73121 3.01519 11 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 12 3.10093 3.81394 0.09513 3.74311 12 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 13 3.10093 3.81394 0.09513 3.74311 13 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 14 3.32527 2.74533 3.36417 0.14477 14 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 15 3.10093 3.81394 0.09513 3.74311 15 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 16 3.10093 3.81394 0.09513 3.74311 16 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 17 0.11510 3.60848 2.94886 3.53248 17 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 18 3.32527 2.74533 3.36417 0.14477 18 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 19 3.69346 0.10301 3.73121 3.01519 19 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 20 0.11510 3.60848 2.94886 3.53248 20 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 21 3.69346 0.10301 3.73121 3.01519 21 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 22 3.32527 2.74533 3.36417 0.14477 22 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 23 2.10833 0.30601 2.83467 2.48356 23 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 24 3.10093 3.81394 0.09513 3.74311 24 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 25 3.10093 3.81394 0.09513 3.74311 25 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 26 2.65455 1.31607 2.72074 0.51809 26 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 27 3.32527 2.74533 3.36417 0.14477 27 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 28 3.69346 0.10301 3.73121 3.01519 28 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 29 3.10093 3.81394 0.09513 3.74311 29 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 30 3.32527 2.74533 3.36417 0.14477 30 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 31 3.10093 3.81394 0.09513 3.74311 31 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 32 3.10093 3.81394 0.09513 3.74311 32 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 33 0.11510 3.60848 2.94886 3.53248 33 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 34 3.32527 2.74533 3.36417 0.14477 34 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 35 3.69346 0.10301 3.73121 3.01519 35 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 36 3.10093 3.81394 0.09513 3.74311 36 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 37 0.11510 3.60848 2.94886 3.53248 37 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 38 3.32527 2.74533 3.36417 0.14477 38 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 39 3.10093 3.81394 0.09513 3.74311 39 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 40 0.11510 3.60848 2.94886 3.53248 40 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 41 0.11510 3.60848 2.94886 3.53248 41 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 42 3.10093 3.81394 0.09513 3.74311 42 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 43 0.11510 3.60848 2.94886 3.53248 43 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 44 0.11510 3.60848 2.94886 3.53248 44 - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14870 4.14870 1.46634 0.26236 1.09861 0.40547 45 3.69346 0.10301 3.73121 3.01519 45 - - 1.38629 1.38629 1.38629 1.38629 0.01617 4.13278 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:22:32 2012 NSEQ 7 EFFN 3.168457 CKSUM 1185329725 STATS LOCAL MSV -8.1739 0.71932 STATS LOCAL VITERBI -7.6654 0.71932 STATS LOCAL FORWARD -4.0933 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54876 1.39734 1.14224 1.50899 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 0.00000 * 1 3.03775 2.56273 3.08783 0.18710 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 2 3.03775 2.56273 3.08783 0.18710 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 3 0.14877 3.32959 2.76888 3.22651 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 4 3.37463 0.13741 3.42653 2.78623 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 5 3.37463 0.13741 3.42653 2.78623 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 6 3.37463 0.13741 3.42653 2.78623 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 7 3.03775 2.56273 3.08783 0.18710 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 8 2.91185 3.53609 0.12297 3.43546 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 9 2.91185 3.53609 0.12297 3.43546 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 10 0.14877 3.32959 2.76888 3.22651 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 11 3.37463 0.13741 3.42653 2.78623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 12 2.91185 3.53609 0.12297 3.43546 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 13 2.91185 3.53609 0.12297 3.43546 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 14 3.03775 2.56273 3.08783 0.18710 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 15 2.91185 3.53609 0.12297 3.43546 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 16 2.91185 3.53609 0.12297 3.43546 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 17 0.14877 3.32959 2.76888 3.22651 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 18 3.03775 2.56273 3.08783 0.18710 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 19 3.37463 0.13741 3.42653 2.78623 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 20 0.14877 3.32959 2.76888 3.22651 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 21 3.37463 0.13741 3.42653 2.78623 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 22 3.03775 2.56273 3.08783 0.18710 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 23 3.03775 2.56273 3.08783 0.18710 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 24 2.91185 3.53609 0.12297 3.43546 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 25 2.91185 3.53609 0.12297 3.43546 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 26 3.37463 0.13741 3.42653 2.78623 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 27 3.03775 2.56273 3.08783 0.18710 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 28 3.37463 0.13741 3.42653 2.78623 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 29 2.91185 3.53609 0.12297 3.43546 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 30 3.37463 0.13741 3.42653 2.78623 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 31 2.91185 3.53609 0.12297 3.43546 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 32 2.91185 3.53609 0.12297 3.43546 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 33 2.91185 3.53609 0.12297 3.43546 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 34 3.03775 2.56273 3.08783 0.18710 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 35 3.37463 0.13741 3.42653 2.78623 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 36 2.91185 3.53609 0.12297 3.43546 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 37 0.14877 3.32959 2.76888 3.22651 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 38 3.03775 2.56273 3.08783 0.18710 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 39 2.91185 3.53609 0.12297 3.43546 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 40 0.14877 3.32959 2.76888 3.22651 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 41 0.14877 3.32959 2.76888 3.22651 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 42 2.91185 3.53609 0.12297 3.43546 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 43 0.14877 3.32959 2.76888 3.22651 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 44 0.14877 3.32959 2.76888 3.22651 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 45 3.37463 0.13741 3.42653 2.78623 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96432 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:13 2012 NSEQ 2 EFFN 2.000000 CKSUM 718889203 STATS LOCAL MSV -7.4369 0.72883 STATS LOCAL VITERBI -8.3333 0.72883 STATS LOCAL FORWARD -3.3820 0.72883 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.43056 1.37707 1.25719 1.49587 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.15554 1.00938 2.23102 0.88601 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 1.03732 1.95876 1.96551 1.00928 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:10 2012 NSEQ 4 EFFN 3.199219 CKSUM 997121201 STATS LOCAL MSV -8.1142 0.71933 STATS LOCAL VITERBI -7.6231 0.71933 STATS LOCAL FORWARD -4.2369 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21776 1.39643 1.37797 1.58700 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 * 1 3.38655 0.13590 3.43796 2.79498 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 2 0.14734 3.33991 2.77563 3.23778 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 3 0.14734 3.33991 2.77563 3.23778 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 4 3.38655 0.13590 3.43796 2.79498 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 5 3.38655 0.13590 3.43796 2.79498 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 6 0.14734 3.33991 2.77563 3.23778 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 7 3.04806 2.56931 3.09775 0.18535 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 8 2.91917 3.54665 0.12176 3.44709 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 9 0.14734 3.33991 2.77563 3.23778 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 10 0.14734 3.33991 2.77563 3.23778 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 11 3.38655 0.13590 3.43796 2.79498 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 12 0.14734 3.33991 2.77563 3.23778 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 13 2.91917 3.54665 0.12176 3.44709 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 14 3.04806 2.56931 3.09775 0.18535 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 15 2.91917 3.54665 0.12176 3.44709 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 16 2.91917 3.54665 0.12176 3.44709 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 17 0.14734 3.33991 2.77563 3.23778 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 18 3.04806 2.56931 3.09775 0.18535 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 19 3.38655 0.13590 3.43796 2.79498 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 20 0.14734 3.33991 2.77563 3.23778 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 21 3.38655 0.13590 3.43796 2.79498 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 22 3.04806 2.56931 3.09775 0.18535 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 23 3.38655 0.13590 3.43796 2.79498 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 24 2.91917 3.54665 0.12176 3.44709 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 25 2.91917 3.54665 0.12176 3.44709 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 26 3.38655 0.13590 3.43796 2.79498 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 27 3.04806 2.56931 3.09775 0.18535 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 28 3.38655 0.13590 3.43796 2.79498 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 29 2.91917 3.54665 0.12176 3.44709 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 30 3.04806 2.56931 3.09775 0.18535 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 31 2.91917 3.54665 0.12176 3.44709 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 32 3.04806 2.56931 3.09775 0.18535 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 33 0.14734 3.33991 2.77563 3.23778 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 34 3.04806 2.56931 3.09775 0.18535 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 35 3.38655 0.13590 3.43796 2.79498 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 36 2.91917 3.54665 0.12176 3.44709 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 37 0.14734 3.33991 2.77563 3.23778 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 38 3.04806 2.56931 3.09775 0.18535 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 39 2.91917 3.54665 0.12176 3.44709 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 40 0.14734 3.33991 2.77563 3.23778 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 41 0.14734 3.33991 2.77563 3.23778 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 42 2.91917 3.54665 0.12176 3.44709 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 43 0.14734 3.33991 2.77563 3.23778 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 44 0.14734 3.33991 2.77563 3.23778 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 45 3.38655 0.13590 3.43796 2.79498 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97014 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:58 2012 NSEQ 7 EFFN 3.257324 CKSUM 2784065201 STATS LOCAL MSV -8.1117 0.71933 STATS LOCAL VITERBI -7.4429 0.71933 STATS LOCAL FORWARD -4.2246 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33671 1.45799 1.38014 1.37419 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 0.00000 * 1 3.40872 0.13316 3.45920 2.81121 1 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 2 0.14472 3.35911 2.78816 3.25878 2 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 3 0.14472 3.35911 2.78816 3.25878 3 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 4 3.40872 0.13316 3.45920 2.81121 4 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 5 3.06731 2.58158 3.11627 0.18215 5 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 6 3.06731 2.58158 3.11627 0.18215 6 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 7 3.06731 2.58158 3.11627 0.18215 7 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 8 3.06731 2.58158 3.11627 0.18215 8 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 9 0.14472 3.35911 2.78816 3.25878 9 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 10 0.14472 3.35911 2.78816 3.25878 10 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 11 3.40872 0.13316 3.45920 2.81121 11 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 12 2.93271 3.56625 0.11954 3.46869 12 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 13 2.93271 3.56625 0.11954 3.46869 13 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 14 3.06731 2.58158 3.11627 0.18215 14 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 15 2.93271 3.56625 0.11954 3.46869 15 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 16 2.93271 3.56625 0.11954 3.46869 16 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 17 0.14472 3.35911 2.78816 3.25878 17 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 18 3.06731 2.58158 3.11627 0.18215 18 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 19 3.40872 0.13316 3.45920 2.81121 19 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 20 3.06731 2.58158 3.11627 0.18215 20 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 21 3.40872 0.13316 3.45920 2.81121 21 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 22 3.06731 2.58158 3.11627 0.18215 22 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 23 0.14472 3.35911 2.78816 3.25878 23 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 24 2.93271 3.56625 0.11954 3.46869 24 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 25 2.93271 3.56625 0.11954 3.46869 25 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 26 3.40872 0.13316 3.45920 2.81121 26 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 27 3.06731 2.58158 3.11627 0.18215 27 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 28 3.40872 0.13316 3.45920 2.81121 28 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 29 2.93271 3.56625 0.11954 3.46869 29 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 30 3.40872 0.13316 3.45920 2.81121 30 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 31 2.93271 3.56625 0.11954 3.46869 31 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 32 3.06731 2.58158 3.11627 0.18215 32 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 33 0.14472 3.35911 2.78816 3.25878 33 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 34 3.06731 2.58158 3.11627 0.18215 34 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 35 3.40872 0.13316 3.45920 2.81121 35 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 36 2.93271 3.56625 0.11954 3.46869 36 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 37 0.14472 3.35911 2.78816 3.25878 37 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 38 3.06731 2.58158 3.11627 0.18215 38 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 39 2.93271 3.56625 0.11954 3.46869 39 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 40 0.14472 3.35911 2.78816 3.25878 40 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 41 0.14472 3.35911 2.78816 3.25878 41 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 42 2.93271 3.56625 0.11954 3.46869 42 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 43 0.14472 3.35911 2.78816 3.25878 43 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 44 0.14472 3.35911 2.78816 3.25878 44 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 45 3.40872 0.13316 3.45920 2.81121 45 - - 1.38629 1.38629 1.38629 1.38629 0.01884 3.98105 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:51 2012 NSEQ 2 EFFN 2.000000 CKSUM 4071785967 STATS LOCAL MSV -7.3852 0.72798 STATS LOCAL VITERBI -8.0260 0.72798 STATS LOCAL FORWARD -3.6008 0.72798 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.52069 1.33872 1.32202 1.37570 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:28:20 2012 NSEQ 4 EFFN 3.238281 CKSUM 1537853273 STATS LOCAL MSV -8.1019 0.71933 STATS LOCAL VITERBI -7.6129 0.71933 STATS LOCAL FORWARD -4.0493 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21502 1.62390 1.30909 1.44351 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 3.06103 2.57758 3.11024 0.18319 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 3.40150 0.13404 3.45229 2.80593 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 0.14557 3.35286 2.78409 3.25194 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.40150 0.13404 3.45229 2.80593 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 0.14557 3.35286 2.78409 3.25194 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 0.14557 3.35286 2.78409 3.25194 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 3.06103 2.57758 3.11024 0.18319 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.06103 2.57758 3.11024 0.18319 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 0.14557 3.35286 2.78409 3.25194 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 0.14557 3.35286 2.78409 3.25194 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 3.40150 0.13404 3.45229 2.80593 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 2.92831 3.55987 0.12026 3.46167 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 2.92831 3.55987 0.12026 3.46167 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 2.92831 3.55987 0.12026 3.46167 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 2.92831 3.55987 0.12026 3.46167 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 0.14557 3.35286 2.78409 3.25194 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 3.06103 2.57758 3.11024 0.18319 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 3.40150 0.13404 3.45229 2.80593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 0.14557 3.35286 2.78409 3.25194 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 3.40150 0.13404 3.45229 2.80593 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 3.06103 2.57758 3.11024 0.18319 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 3.06103 2.57758 3.11024 0.18319 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 2.92831 3.55987 0.12026 3.46167 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 2.92831 3.55987 0.12026 3.46167 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 2.92831 3.55987 0.12026 3.46167 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 3.06103 2.57758 3.11024 0.18319 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 2.92831 3.55987 0.12026 3.46167 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 3.06103 2.57758 3.11024 0.18319 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 0.14557 3.35286 2.78409 3.25194 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 2.92831 3.55987 0.12026 3.46167 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 0.14557 3.35286 2.78409 3.25194 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 3.06103 2.57758 3.11024 0.18319 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 3.40150 0.13404 3.45229 2.80593 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 2.92831 3.55987 0.12026 3.46167 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 0.14557 3.35286 2.78409 3.25194 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.06103 2.57758 3.11024 0.18319 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 2.92831 3.55987 0.12026 3.46167 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 0.14557 3.35286 2.78409 3.25194 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 0.14557 3.35286 2.78409 3.25194 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 2.92831 3.55987 0.12026 3.46167 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 0.14557 3.35286 2.78409 3.25194 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 0.14557 3.35286 2.78409 3.25194 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 3.40150 0.13404 3.45229 2.80593 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:19 2012 NSEQ 3 EFFN 3.000000 CKSUM 2207381587 STATS LOCAL MSV -7.9442 0.71991 STATS LOCAL VITERBI -7.7532 0.71991 STATS LOCAL FORWARD -3.8730 0.71991 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54730 1.33345 1.14506 1.58275 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.97980 2.52563 3.03204 0.19727 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:19 2012 NSEQ 44 EFFN 3.316650 CKSUM 3195064440 STATS LOCAL MSV -8.1963 0.71932 STATS LOCAL VITERBI -7.7078 0.71932 STATS LOCAL FORWARD -4.2345 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.42255 1.20259 1.37985 1.57568 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 * 1 3.43088 0.13047 3.48043 2.82738 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 2 0.14215 3.37833 2.80067 3.27981 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 3 0.14215 3.37833 2.80067 3.27981 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 4 3.43088 0.13047 3.48043 2.82738 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 5 3.08666 2.59390 3.13489 0.17899 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 6 3.08666 2.59390 3.13489 0.17899 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 7 3.43088 0.13047 3.48043 2.82738 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 8 3.08666 2.59390 3.13489 0.17899 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 9 0.14215 3.37833 2.80067 3.27981 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 10 0.14215 3.37833 2.80067 3.27981 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 11 3.43088 0.13047 3.48043 2.82738 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 12 2.94618 3.58579 0.11737 3.49026 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 13 2.94618 3.58579 0.11737 3.49026 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 14 3.08666 2.59390 3.13489 0.17899 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 15 2.94618 3.58579 0.11737 3.49026 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 16 2.94618 3.58579 0.11737 3.49026 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 17 0.14215 3.37833 2.80067 3.27981 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 18 3.43088 0.13047 3.48043 2.82738 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 19 3.43088 0.13047 3.48043 2.82738 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 20 3.43088 0.13047 3.48043 2.82738 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 21 3.43088 0.13047 3.48043 2.82738 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 22 3.08666 2.59390 3.13489 0.17899 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 23 3.43088 0.13047 3.48043 2.82738 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 24 2.94618 3.58579 0.11737 3.49026 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 25 2.94618 3.58579 0.11737 3.49026 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 26 3.43088 0.13047 3.48043 2.82738 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 27 3.08666 2.59390 3.13489 0.17899 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 28 3.43088 0.13047 3.48043 2.82738 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 29 2.23374 3.19285 0.21615 3.07464 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 30 3.08666 2.59390 3.13489 0.17899 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 31 2.94618 3.58579 0.11737 3.49026 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 32 3.43088 0.13047 3.48043 2.82738 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 33 0.45634 2.68837 1.51211 2.55144 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 34 3.08666 2.59390 3.13489 0.17899 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 35 3.43088 0.13047 3.48043 2.82738 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 36 2.94618 3.58579 0.11737 3.49026 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 37 0.14215 3.37833 2.80067 3.27981 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 38 3.08666 2.59390 3.13489 0.17899 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 39 2.94618 3.58579 0.11737 3.49026 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 40 0.14215 3.37833 2.80067 3.27981 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 41 0.14215 3.37833 2.80067 3.27981 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 42 2.94618 3.58579 0.11737 3.49026 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 43 0.14215 3.37833 2.80067 3.27981 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 44 0.14215 3.37833 2.80067 3.27981 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 45 3.43088 0.13047 3.48043 2.82738 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:24 2012 NSEQ 5 EFFN 3.178711 CKSUM 557866279 STATS LOCAL MSV -8.2628 0.71932 STATS LOCAL VITERBI -7.7354 0.71932 STATS LOCAL FORWARD -4.3627 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40535 1.26751 1.31792 1.58234 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 * 1 3.37862 0.13690 3.43035 2.78916 1 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 2 0.14829 3.33304 2.77114 3.23028 2 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 3 0.14829 3.33304 2.77114 3.23028 3 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 4 3.37862 0.13690 3.43035 2.78916 4 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 5 3.04119 2.56493 3.09115 0.18651 5 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 6 3.04119 2.56493 3.09115 0.18651 6 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 7 3.37862 0.13690 3.43035 2.78916 7 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 8 3.04119 2.56493 3.09115 0.18651 8 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 9 0.14829 3.33304 2.77114 3.23028 9 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 10 0.14829 3.33304 2.77114 3.23028 10 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 11 3.37862 0.13690 3.43035 2.78916 11 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 12 2.91430 3.53962 0.12257 3.43936 12 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 13 2.91430 3.53962 0.12257 3.43936 13 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 14 3.04119 2.56493 3.09115 0.18651 14 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 15 2.91430 3.53962 0.12257 3.43936 15 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 16 2.91430 3.53962 0.12257 3.43936 16 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 17 0.14829 3.33304 2.77114 3.23028 17 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 18 3.37862 0.13690 3.43035 2.78916 18 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 19 0.14829 3.33304 2.77114 3.23028 19 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 20 3.37862 0.13690 3.43035 2.78916 20 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 21 3.37862 0.13690 3.43035 2.78916 21 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 22 3.04119 2.56493 3.09115 0.18651 22 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 23 3.37862 0.13690 3.43035 2.78916 23 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 24 2.91430 3.53962 0.12257 3.43936 24 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 25 2.91430 3.53962 0.12257 3.43936 25 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 26 3.37862 0.13690 3.43035 2.78916 26 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 27 3.04119 2.56493 3.09115 0.18651 27 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 28 3.37862 0.13690 3.43035 2.78916 28 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 29 2.91430 3.53962 0.12257 3.43936 29 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 30 3.04119 2.56493 3.09115 0.18651 30 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 31 2.91430 3.53962 0.12257 3.43936 31 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 32 3.04119 2.56493 3.09115 0.18651 32 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 33 0.14829 3.33304 2.77114 3.23028 33 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 34 3.37862 0.13690 3.43035 2.78916 34 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 35 3.37862 0.13690 3.43035 2.78916 35 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 36 2.91430 3.53962 0.12257 3.43936 36 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 37 0.14829 3.33304 2.77114 3.23028 37 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 38 3.04119 2.56493 3.09115 0.18651 38 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 39 2.91430 3.53962 0.12257 3.43936 39 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 40 0.14829 3.33304 2.77114 3.23028 40 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 41 0.14829 3.33304 2.77114 3.23028 41 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 42 2.91430 3.53962 0.12257 3.43936 42 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 43 0.14829 3.33304 2.77114 3.23028 43 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 44 2.91430 3.53962 0.12257 3.43936 44 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 45 3.37862 0.13690 3.43035 2.78916 45 - - 1.38629 1.38629 1.38629 1.38629 0.01913 3.96627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:29 2012 NSEQ 4 EFFN 3.363281 CKSUM 862441232 STATS LOCAL MSV -8.0904 0.71931 STATS LOCAL VITERBI -7.5210 0.71931 STATS LOCAL FORWARD -4.2499 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.44563 1.38319 1.31183 1.40936 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 * 1 3.44798 0.12845 3.49681 2.83981 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 2 0.14020 3.39317 2.81030 3.29606 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 3 0.14020 3.39317 2.81030 3.29606 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 4 3.44798 0.12845 3.49681 2.83981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 5 3.10166 2.60344 3.14932 0.17659 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 6 3.10166 2.60344 3.14932 0.17659 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 7 3.44798 0.12845 3.49681 2.83981 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 8 3.10166 2.60344 3.14932 0.17659 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 9 2.95651 3.60084 0.11574 3.50687 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 10 0.14020 3.39317 2.81030 3.29606 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 11 3.44798 0.12845 3.49681 2.83981 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 12 2.95651 3.60084 0.11574 3.50687 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 13 2.95651 3.60084 0.11574 3.50687 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 14 3.10166 2.60344 3.14932 0.17659 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 15 2.95651 3.60084 0.11574 3.50687 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 16 2.95651 3.60084 0.11574 3.50687 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 17 0.14020 3.39317 2.81030 3.29606 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 18 3.10166 2.60344 3.14932 0.17659 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 19 3.44798 0.12845 3.49681 2.83981 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 20 3.10166 2.60344 3.14932 0.17659 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 21 3.44798 0.12845 3.49681 2.83981 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 22 3.10166 2.60344 3.14932 0.17659 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 23 0.97344 2.14787 2.16342 0.94018 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 24 2.95651 3.60084 0.11574 3.50687 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 25 2.95651 3.60084 0.11574 3.50687 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 26 3.44798 0.12845 3.49681 2.83981 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 27 3.10166 2.60344 3.14932 0.17659 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 28 3.44798 0.12845 3.49681 2.83981 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 29 2.95651 3.60084 0.11574 3.50687 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 30 3.10166 2.60344 3.14932 0.17659 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 31 2.95651 3.60084 0.11574 3.50687 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 32 3.44798 0.12845 3.49681 2.83981 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 33 0.14020 3.39317 2.81030 3.29606 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 34 3.10166 2.60344 3.14932 0.17659 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 35 3.44798 0.12845 3.49681 2.83981 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 36 2.95651 3.60084 0.11574 3.50687 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 37 0.14020 3.39317 2.81030 3.29606 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 38 3.10166 2.60344 3.14932 0.17659 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 39 2.95651 3.60084 0.11574 3.50687 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 40 0.14020 3.39317 2.81030 3.29606 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 41 0.14020 3.39317 2.81030 3.29606 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 42 2.95651 3.60084 0.11574 3.50687 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 43 0.14020 3.39317 2.81030 3.29606 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 44 0.14020 3.39317 2.81030 3.29606 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 45 3.44798 0.12845 3.49681 2.83981 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00063 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevend_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:33 2012 NSEQ 4 EFFN 3.355469 CKSUM 3256074058 STATS LOCAL MSV -7.9928 0.71933 STATS LOCAL VITERBI -7.4659 0.71933 STATS LOCAL FORWARD -4.2898 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40045 1.36100 1.37985 1.40449 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 0.00000 * 1 3.44514 0.12878 3.49408 2.83774 1 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 2 0.14052 3.39070 2.80870 3.29336 2 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 3 0.14052 3.39070 2.80870 3.29336 3 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 4 3.44514 0.12878 3.49408 2.83774 4 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 5 3.09916 2.60185 3.14691 0.17699 5 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 6 3.09916 2.60185 3.14691 0.17699 6 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 7 3.44514 0.12878 3.49408 2.83774 7 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 8 2.41122 0.95644 2.48325 0.81517 8 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 9 0.14052 3.39070 2.80870 3.29336 9 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 10 0.14052 3.39070 2.80870 3.29336 10 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 11 3.44514 0.12878 3.49408 2.83774 11 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 12 2.95480 3.59834 0.11601 3.50411 12 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 13 2.95480 3.59834 0.11601 3.50411 13 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 14 3.09916 2.60185 3.14691 0.17699 14 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 15 2.95480 3.59834 0.11601 3.50411 15 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 16 2.95480 3.59834 0.11601 3.50411 16 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 17 0.14052 3.39070 2.80870 3.29336 17 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 18 3.09916 2.60185 3.14691 0.17699 18 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 19 3.44514 0.12878 3.49408 2.83774 19 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 20 3.09916 2.60185 3.14691 0.17699 20 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 21 3.44514 0.12878 3.49408 2.83774 21 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 22 3.09916 2.60185 3.14691 0.17699 22 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 23 3.44514 0.12878 3.49408 2.83774 23 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 24 2.95480 3.59834 0.11601 3.50411 24 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 25 2.95480 3.59834 0.11601 3.50411 25 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 26 3.44514 0.12878 3.49408 2.83774 26 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 27 3.09916 2.60185 3.14691 0.17699 27 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 28 3.09916 2.60185 3.14691 0.17699 28 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 29 2.95480 3.59834 0.11601 3.50411 29 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 30 3.09916 2.60185 3.14691 0.17699 30 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 31 2.95480 3.59834 0.11601 3.50411 31 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 32 3.44514 0.12878 3.49408 2.83774 32 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 33 0.14052 3.39070 2.80870 3.29336 33 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 34 3.09916 2.60185 3.14691 0.17699 34 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 35 3.44514 0.12878 3.49408 2.83774 35 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 36 2.95480 3.59834 0.11601 3.50411 36 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 37 0.14052 3.39070 2.80870 3.29336 37 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 38 3.09916 2.60185 3.14691 0.17699 38 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 39 2.95480 3.59834 0.11601 3.50411 39 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 40 0.14052 3.39070 2.80870 3.29336 40 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 41 0.14052 3.39070 2.80870 3.29336 41 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 42 2.95480 3.59834 0.11601 3.50411 42 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 43 0.14052 3.39070 2.80870 3.29336 43 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 44 0.14052 3.39070 2.80870 3.29336 44 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 45 3.44514 0.12878 3.49408 2.83774 45 - - 1.38629 1.38629 1.38629 1.38629 0.01850 3.99920 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevene_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:39 2012 NSEQ 7 EFFN 3.195801 CKSUM 3140450226 STATS LOCAL MSV -8.0348 0.71932 STATS LOCAL VITERBI -7.6161 0.71932 STATS LOCAL FORWARD -4.0740 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27701 1.32955 1.38039 1.58448 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 0.00000 * 1 3.38523 0.13607 3.43670 2.79401 1 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 2 0.14750 3.33877 2.77489 3.23653 2 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 3 0.14750 3.33877 2.77489 3.23653 3 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 4 3.38523 0.13607 3.43670 2.79401 4 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 5 3.04692 2.56858 3.09666 0.18555 5 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 6 3.38523 0.13607 3.43670 2.79401 6 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 7 0.14750 3.33877 2.77489 3.23653 7 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 8 2.91836 3.54548 0.12189 3.44581 8 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 9 0.14750 3.33877 2.77489 3.23653 9 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 10 0.14750 3.33877 2.77489 3.23653 10 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 11 3.38523 0.13607 3.43670 2.79401 11 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 12 2.91836 3.54548 0.12189 3.44581 12 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 13 2.91836 3.54548 0.12189 3.44581 13 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 14 3.04692 2.56858 3.09666 0.18555 14 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 15 2.91836 3.54548 0.12189 3.44581 15 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 16 2.91836 3.54548 0.12189 3.44581 16 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 17 0.14750 3.33877 2.77489 3.23653 17 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 18 3.04692 2.56858 3.09666 0.18555 18 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 19 3.38523 0.13607 3.43670 2.79401 19 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 20 3.04692 2.56858 3.09666 0.18555 20 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 21 3.38523 0.13607 3.43670 2.79401 21 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 22 3.04692 2.56858 3.09666 0.18555 22 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 23 3.04692 2.56858 3.09666 0.18555 23 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 24 2.91836 3.54548 0.12189 3.44581 24 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 25 2.91836 3.54548 0.12189 3.44581 25 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 26 3.38523 0.13607 3.43670 2.79401 26 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 27 3.04692 2.56858 3.09666 0.18555 27 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 28 3.38523 0.13607 3.43670 2.79401 28 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 29 0.14750 3.33877 2.77489 3.23653 29 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 30 3.38523 0.13607 3.43670 2.79401 30 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 31 2.91836 3.54548 0.12189 3.44581 31 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 32 3.38523 0.13607 3.43670 2.79401 32 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 33 0.14750 3.33877 2.77489 3.23653 33 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 34 3.04692 2.56858 3.09666 0.18555 34 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 35 3.38523 0.13607 3.43670 2.79401 35 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 36 2.91836 3.54548 0.12189 3.44581 36 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 37 0.14750 3.33877 2.77489 3.23653 37 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 38 3.04692 2.56858 3.09666 0.18555 38 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 39 2.91836 3.54548 0.12189 3.44581 39 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 40 0.14750 3.33877 2.77489 3.23653 40 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 41 0.14750 3.33877 2.77489 3.23653 41 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 42 2.91836 3.54548 0.12189 3.44581 42 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 43 0.14750 3.33877 2.77489 3.23653 43 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 44 0.14750 3.33877 2.77489 3.23653 44 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98821 3.98821 1.46634 0.26236 1.09861 0.40547 45 3.38523 0.13607 3.43670 2.79401 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96950 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysevenf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:48 2012 NSEQ 2 EFFN 2.000000 CKSUM 2853933875 STATS LOCAL MSV -7.5713 0.72765 STATS LOCAL VITERBI -8.1497 0.72765 STATS LOCAL FORWARD -3.4317 0.72765 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39938 1.29426 1.32042 1.55057 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.23862 2.84929 2.43386 2.70756 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentyseveng_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:53 2012 NSEQ 2 EFFN 2.000000 CKSUM 2803901569 STATS LOCAL MSV -7.6218 0.72807 STATS LOCAL VITERBI -8.1462 0.72807 STATS LOCAL FORWARD -3.4806 0.72807 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39704 1.39574 1.37569 1.37692 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.23862 2.84929 2.43386 2.70756 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:27:08 2012 NSEQ 253 EFFN 4.026474 CKSUM 1317147062 STATS LOCAL MSV -7.2295 0.71931 STATS LOCAL VITERBI -7.5384 0.71931 STATS LOCAL FORWARD -4.2378 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39703 1.43388 1.38321 1.33365 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 0.00000 * 1 3.40850 0.15906 3.45793 2.49536 1 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 2 0.11797 3.58132 2.93141 3.50261 2 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 3 0.11797 3.58132 2.93141 3.50261 3 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 4 3.59353 0.11910 3.63549 2.84027 4 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 5 3.29641 2.72699 3.33646 0.14849 5 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 6 3.22497 2.53341 3.26815 0.17105 6 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 7 3.10291 2.24632 3.15164 0.21504 7 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 8 2.85111 2.18143 3.02339 0.24756 8 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 9 0.56245 2.70702 1.24874 2.56935 9 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 10 0.12854 3.53848 2.81268 3.45705 10 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 11 3.66283 0.10585 3.70202 2.99357 11 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 12 3.08319 3.78761 0.09744 3.71385 12 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 13 3.08319 3.78761 0.09744 3.71385 13 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 14 3.25561 2.61343 3.29740 0.16113 14 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 15 3.08319 3.78761 0.09744 3.71385 15 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 16 3.08319 3.78761 0.09744 3.71385 16 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 17 0.11797 3.58132 2.93141 3.50261 17 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 18 3.29641 2.72699 3.33646 0.14849 18 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 19 3.66283 0.10585 3.70202 2.99357 19 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 20 3.29641 2.72699 3.33646 0.14849 20 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 21 3.66283 0.10585 3.70202 2.99357 21 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 22 3.29641 2.72699 3.33646 0.14849 22 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 23 2.09673 2.47384 2.75948 0.31532 23 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 24 3.08319 3.78761 0.09744 3.71385 24 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 25 3.08319 3.78761 0.09744 3.71385 25 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 26 3.66283 0.10585 3.70202 2.99357 26 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 27 3.29641 2.72699 3.33646 0.14849 27 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 28 3.66283 0.10585 3.70202 2.99357 28 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 29 1.22589 2.72482 0.56994 2.58517 29 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 30 2.57847 1.17628 2.64686 0.60731 30 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 31 3.03660 3.50808 0.11130 3.59791 31 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 32 2.87089 0.28327 2.66540 2.11638 32 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 33 0.11797 3.58132 2.93141 3.50261 33 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 34 3.29641 2.72699 3.33646 0.14849 34 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 35 3.66283 0.10585 3.70202 2.99357 35 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 36 3.08319 3.78761 0.09744 3.71385 36 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 37 0.11797 3.58132 2.93141 3.50261 37 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 38 3.29641 2.72699 3.33646 0.14849 38 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 39 3.08319 3.78761 0.09744 3.71385 39 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 40 0.11797 3.58132 2.93141 3.50261 40 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 41 0.14845 3.13087 2.85707 3.30125 41 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 42 3.08319 3.78761 0.09744 3.71385 42 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 43 0.11797 3.58132 2.93141 3.50261 43 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 44 0.11797 3.58132 2.93141 3.50261 44 - - 1.38629 1.38629 1.38629 1.38629 0.03265 4.13140 4.13140 1.46634 0.26236 1.09861 0.40547 45 3.66283 0.10585 3.70202 2.99357 45 - - 1.38629 1.38629 1.38629 1.38629 0.01646 4.11521 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentythreea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:34 2012 NSEQ 2 EFFN 2.000000 CKSUM 2259417781 STATS LOCAL MSV -7.6133 0.72781 STATS LOCAL VITERBI -8.2844 0.72781 STATS LOCAL FORWARD -3.9462 0.72781 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33950 1.52792 1.26007 1.43800 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.23862 2.84929 2.43386 2.70756 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentythreeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:41 2012 NSEQ 43 EFFN 3.760925 CKSUM 3682624133 STATS LOCAL MSV -7.3174 0.71933 STATS LOCAL VITERBI -7.6672 0.71933 STATS LOCAL FORWARD -4.3209 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.31564 1.59503 1.29739 1.36433 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 0.00000 * 1 1.83504 0.73322 2.26296 1.36261 1 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 2 3.22243 2.68004 3.26539 0.15853 2 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 3 0.12580 3.51085 2.88617 3.42515 3 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 4 3.03658 3.71852 0.10380 3.63715 4 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 5 3.58284 0.11369 3.62571 2.93680 5 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 6 2.89860 1.95235 2.95493 0.28651 6 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 7 3.22243 2.68004 3.26539 0.15853 7 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 8 2.49156 0.79132 2.56312 0.94956 8 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 9 0.12580 3.51085 2.88617 3.42515 9 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 10 3.03658 3.71852 0.10380 3.63715 10 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 11 3.58284 0.11369 3.62571 2.93680 11 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 12 3.03658 3.71852 0.10380 3.63715 12 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 13 0.12580 3.51085 2.88617 3.42515 13 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 14 3.22243 2.68004 3.26539 0.15853 14 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 15 3.03658 3.71852 0.10380 3.63715 15 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 16 3.03658 3.71852 0.10380 3.63715 16 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 17 0.12580 3.51085 2.88617 3.42515 17 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 18 3.22243 2.68004 3.26539 0.15853 18 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 19 3.58284 0.11369 3.62571 2.93680 19 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 20 3.03658 3.71852 0.10380 3.63715 20 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 21 3.03658 3.71852 0.10380 3.63715 21 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 22 3.22243 2.68004 3.26539 0.15853 22 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 23 2.49781 1.06169 2.56808 0.70283 23 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 24 3.03658 3.71852 0.10380 3.63715 24 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 25 0.12580 3.51085 2.88617 3.42515 25 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 26 3.22243 2.68004 3.26539 0.15853 26 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 27 3.22243 2.68004 3.26539 0.15853 27 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 28 3.29640 0.15708 3.05878 2.79028 28 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 29 3.03658 3.71852 0.10380 3.63715 29 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 30 3.58284 0.11369 3.62571 2.93680 30 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 31 3.03658 3.71852 0.10380 3.63715 31 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 32 3.22243 2.68004 3.26539 0.15853 32 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 33 0.12580 3.51085 2.88617 3.42515 33 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 34 3.22243 2.68004 3.26539 0.15853 34 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 35 3.58284 0.11369 3.62571 2.93680 35 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 36 3.03658 3.71852 0.10380 3.63715 36 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 37 0.12580 3.51085 2.88617 3.42515 37 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 38 3.22243 2.68004 3.26539 0.15853 38 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 39 3.03658 3.71852 0.10380 3.63715 39 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 40 0.12580 3.51085 2.88617 3.42515 40 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 41 0.12580 3.51085 2.88617 3.42515 41 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 42 0.12580 3.51085 2.88617 3.42515 42 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 43 0.12580 3.51085 2.88617 3.42515 43 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 44 0.12580 3.51085 2.88617 3.42515 44 - - 1.38629 1.38629 1.38629 1.38629 0.03413 4.08781 4.08781 1.46634 0.26236 1.09861 0.40547 45 3.58284 0.11369 3.62571 2.93680 45 - - 1.38629 1.38629 1.38629 1.38629 0.01721 4.07089 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:26:26 2012 NSEQ 7 EFFN 3.243652 CKSUM 1514906456 STATS LOCAL MSV -7.9402 0.71932 STATS LOCAL VITERBI -7.5897 0.71932 STATS LOCAL FORWARD -4.2164 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16403 1.39200 1.52407 1.50791 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 0.00000 * 1 3.40354 0.13379 3.45424 2.80742 1 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 2 0.14533 3.35462 2.78524 3.25387 2 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 3 3.06280 2.57871 3.11194 0.18289 3 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 4 3.40354 0.13379 3.45424 2.80742 4 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 5 3.06280 2.57871 3.11194 0.18289 5 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 6 3.06280 2.57871 3.11194 0.18289 6 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 7 3.40354 0.13379 3.45424 2.80742 7 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 8 0.14533 3.35462 2.78524 3.25387 8 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 9 0.14533 3.35462 2.78524 3.25387 9 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 10 2.92956 3.56167 0.12005 3.46366 10 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 11 3.40354 0.13379 3.45424 2.80742 11 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 12 2.92956 3.56167 0.12005 3.46366 12 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 13 2.92956 3.56167 0.12005 3.46366 13 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 14 3.06280 2.57871 3.11194 0.18289 14 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 15 2.92956 3.56167 0.12005 3.46366 15 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 16 2.92956 3.56167 0.12005 3.46366 16 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 17 0.14533 3.35462 2.78524 3.25387 17 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 18 3.06280 2.57871 3.11194 0.18289 18 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 19 3.40354 0.13379 3.45424 2.80742 19 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 20 0.14533 3.35462 2.78524 3.25387 20 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 21 3.40354 0.13379 3.45424 2.80742 21 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 22 3.06280 2.57871 3.11194 0.18289 22 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 23 3.40354 0.13379 3.45424 2.80742 23 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 24 2.92956 3.56167 0.12005 3.46366 24 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 25 0.14533 3.35462 2.78524 3.25387 25 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 26 0.14533 3.35462 2.78524 3.25387 26 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 27 3.06280 2.57871 3.11194 0.18289 27 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 28 3.06280 2.57871 3.11194 0.18289 28 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 29 0.14533 3.35462 2.78524 3.25387 29 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 30 3.40354 0.13379 3.45424 2.80742 30 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 31 3.40354 0.13379 3.45424 2.80742 31 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 32 0.14533 3.35462 2.78524 3.25387 32 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 33 0.14533 3.35462 2.78524 3.25387 33 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 34 3.06280 2.57871 3.11194 0.18289 34 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 35 3.40354 0.13379 3.45424 2.80742 35 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 36 2.92956 3.56167 0.12005 3.46366 36 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 37 0.14533 3.35462 2.78524 3.25387 37 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 38 3.06280 2.57871 3.11194 0.18289 38 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 39 2.92956 3.56167 0.12005 3.46366 39 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 40 0.14533 3.35462 2.78524 3.25387 40 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 41 0.14533 3.35462 2.78524 3.25387 41 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 42 2.92956 3.56167 0.12005 3.46366 42 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 43 0.14533 3.35462 2.78524 3.25387 43 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 44 0.14533 3.35462 2.78524 3.25387 44 - - 1.38629 1.38629 1.38629 1.38629 0.03743 3.99704 3.99704 1.46634 0.26236 1.09861 0.40547 45 3.40354 0.13379 3.45424 2.80742 45 - - 1.38629 1.38629 1.38629 1.38629 0.01889 3.97849 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Metazoa_58S_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Fri Feb 24 23:13:55 2012 NSEQ 14 EFFN 3.270996 CKSUM 1407752784 STATS LOCAL MSV -8.0890 0.71933 STATS LOCAL VITERBI -7.5797 0.71933 STATS LOCAL FORWARD -4.1354 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39927 1.44999 1.19129 1.53795 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 0.00000 * 1 2.46772 1.29197 2.53721 0.57731 1 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 2 3.41386 0.13253 3.46414 2.81497 2 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 3 0.14412 3.36357 2.79107 3.26366 3 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 4 3.07179 2.58444 3.12059 0.18141 4 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 5 3.07179 2.58444 3.12059 0.18141 5 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 6 3.41386 0.13253 3.46414 2.81497 6 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 7 3.07179 2.58444 3.12059 0.18141 7 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 8 0.14412 3.36357 2.79107 3.26366 8 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 9 0.14412 3.36357 2.79107 3.26366 9 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 10 2.93585 3.57079 0.11903 3.47371 10 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 11 3.41386 0.13253 3.46414 2.81497 11 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 12 2.93585 3.57079 0.11903 3.47371 12 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 13 2.93585 3.57079 0.11903 3.47371 13 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 14 3.07179 2.58444 3.12059 0.18141 14 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 15 2.93585 3.57079 0.11903 3.47371 15 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 16 2.93585 3.57079 0.11903 3.47371 16 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 17 0.14412 3.36357 2.79107 3.26366 17 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 18 3.07179 2.58444 3.12059 0.18141 18 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 19 3.41386 0.13253 3.46414 2.81497 19 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 20 0.14412 3.36357 2.79107 3.26366 20 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 21 3.41386 0.13253 3.46414 2.81497 21 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 22 3.07179 2.58444 3.12059 0.18141 22 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 23 0.14412 3.36357 2.79107 3.26366 23 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 24 2.93585 3.57079 0.11903 3.47371 24 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 25 2.93585 3.57079 0.11903 3.47371 25 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 26 3.41386 0.13253 3.46414 2.81497 26 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 27 3.07179 2.58444 3.12059 0.18141 27 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 28 3.41386 0.13253 3.46414 2.81497 28 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 29 2.93585 3.57079 0.11903 3.47371 29 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 30 3.41386 0.13253 3.46414 2.81497 30 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 31 2.93585 3.57079 0.11903 3.47371 31 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 32 2.93585 3.57079 0.11903 3.47371 32 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 33 2.93585 3.57079 0.11903 3.47371 33 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 34 3.07179 2.58444 3.12059 0.18141 34 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 35 3.41386 0.13253 3.46414 2.81497 35 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 36 2.93585 3.57079 0.11903 3.47371 36 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 37 0.14412 3.36357 2.79107 3.26366 37 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 38 3.07179 2.58444 3.12059 0.18141 38 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 39 2.93585 3.57079 0.11903 3.47371 39 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 40 0.14412 3.36357 2.79107 3.26366 40 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 41 0.14412 3.36357 2.79107 3.26366 41 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 42 2.93585 3.57079 0.11903 3.47371 42 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 43 0.14412 3.36357 2.79107 3.26366 43 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 44 0.14412 3.36357 2.79107 3.26366 44 - - 1.38629 1.38629 1.38629 1.38629 0.03724 4.00205 4.00205 1.46634 0.26236 1.09861 0.40547 45 3.41386 0.13253 3.46414 2.81497 45 - - 1.38629 1.38629 1.38629 1.38629 0.01879 3.98360 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eighta_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:10 2012 NSEQ 23 EFFN 3.433716 CKSUM 4182898010 STATS LOCAL MSV -7.6415 0.71931 STATS LOCAL VITERBI -7.6023 0.71931 STATS LOCAL FORWARD -3.9207 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.12569 1.21534 1.78132 1.55804 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 0.00000 * 1 3.12398 2.61761 3.17077 0.17308 1 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 2 3.12398 2.61761 3.17077 0.17308 2 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 3 0.13737 3.41516 2.82454 3.32015 3 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 4 3.47328 0.12552 3.52102 2.85815 4 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 5 2.97172 3.62305 0.11337 3.53141 5 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 6 0.13737 3.41516 2.82454 3.32015 6 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 7 3.47328 0.12552 3.52102 2.85815 7 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 8 3.47328 0.12552 3.52102 2.85815 8 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 9 3.12398 2.61761 3.17077 0.17308 9 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 10 3.47328 0.12552 3.52102 2.85815 10 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 11 0.13737 3.41516 2.82454 3.32015 11 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 12 0.13737 3.41516 2.82454 3.32015 12 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 13 3.47328 0.12552 3.52102 2.85815 13 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 14 3.12398 2.61761 3.17077 0.17308 14 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 15 3.47328 0.12552 3.52102 2.85815 15 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 16 0.13737 3.41516 2.82454 3.32015 16 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 17 0.13737 3.41516 2.82454 3.32015 17 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 18 2.97172 3.62305 0.11337 3.53141 18 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 19 3.47328 0.12552 3.52102 2.85815 19 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 20 0.13737 3.41516 2.82454 3.32015 20 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 21 0.13737 3.41516 2.82454 3.32015 21 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 22 2.97172 3.62305 0.11337 3.53141 22 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 23 0.46297 2.69963 1.48594 2.56304 23 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 24 2.73503 0.38530 2.80315 1.63866 24 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 25 3.12398 2.61761 3.17077 0.17308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 26 0.13737 3.41516 2.82454 3.32015 26 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 27 3.47328 0.12552 3.52102 2.85815 27 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 28 3.47328 0.12552 3.52102 2.85815 28 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 29 3.47328 0.12552 3.52102 2.85815 29 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 30 2.97172 3.62305 0.11337 3.53141 30 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 31 3.47328 0.12552 3.52102 2.85815 31 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 32 3.12398 2.61761 3.17077 0.17308 32 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 33 2.97172 3.62305 0.11337 3.53141 33 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 34 0.13737 3.41516 2.82454 3.32015 34 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 35 0.13737 3.41516 2.82454 3.32015 35 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 36 3.47328 0.12552 3.52102 2.85815 36 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 37 3.12398 2.61761 3.17077 0.17308 37 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 38 3.12398 2.61761 3.17077 0.17308 38 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 39 0.13737 3.41516 2.82454 3.32015 39 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 40 0.13737 3.41516 2.82454 3.32015 40 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 41 2.97172 3.62305 0.11337 3.53141 41 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 42 3.47328 0.12552 3.52102 2.85815 42 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 43 0.13737 3.41516 2.82454 3.32015 43 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 44 3.12398 2.61761 3.17077 0.17308 44 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03135 4.03135 1.46634 0.26236 1.09861 0.40547 45 0.13737 3.41516 2.82454 3.32015 45 - - 1.38629 1.38629 1.38629 1.38629 0.01824 4.01344 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eightc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:19 2012 NSEQ 2 EFFN 2.000000 CKSUM 1363592007 STATS LOCAL MSV -7.2798 0.72798 STATS LOCAL VITERBI -8.2533 0.72798 STATS LOCAL FORWARD -3.3804 0.72798 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24362 1.24172 1.56866 1.53968 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eightd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:26 2012 NSEQ 2 EFFN 2.000000 CKSUM 1020504900 STATS LOCAL MSV -7.5516 0.72962 STATS LOCAL VITERBI -8.2423 0.72962 STATS LOCAL FORWARD -3.4571 0.72962 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19990 1.38841 1.59960 1.39705 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.92825 2.28391 0.95698 2.13014 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 1.03732 1.95876 1.96551 1.00928 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eighte_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:33 2012 NSEQ 2 EFFN 2.000000 CKSUM 868517852 STATS LOCAL MSV -7.3772 0.72815 STATS LOCAL VITERBI -8.2352 0.72815 STATS LOCAL FORWARD -3.3266 0.72815 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14885 1.24042 1.72116 1.53769 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:59:33 2012 NSEQ 15 EFFN 3.431396 CKSUM 2285872056 STATS LOCAL MSV -7.7397 0.71932 STATS LOCAL VITERBI -7.5822 0.71932 STATS LOCAL FORWARD -4.2073 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26609 1.33300 1.52381 1.44179 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 0.00000 * 1 2.68612 1.69220 2.74910 0.38015 1 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 2 1.74335 0.46305 2.47031 2.19692 2 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 3 3.12325 2.61715 3.17007 0.17319 3 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 4 3.12325 2.61715 3.17007 0.17319 4 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 5 2.97122 3.62232 0.11345 3.53061 5 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 6 0.13746 3.41445 2.82408 3.31937 6 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 7 3.47246 0.12561 3.52023 2.85755 7 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 8 3.47246 0.12561 3.52023 2.85755 8 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 9 3.12325 2.61715 3.17007 0.17319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 10 3.47246 0.12561 3.52023 2.85755 10 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 11 0.13746 3.41445 2.82408 3.31937 11 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 12 2.97122 3.62232 0.11345 3.53061 12 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 13 0.13746 3.41445 2.82408 3.31937 13 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 14 3.12325 2.61715 3.17007 0.17319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 15 3.47246 0.12561 3.52023 2.85755 15 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 16 0.13746 3.41445 2.82408 3.31937 16 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 17 2.97122 3.62232 0.11345 3.53061 17 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 18 2.97122 3.62232 0.11345 3.53061 18 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 19 3.47246 0.12561 3.52023 2.85755 19 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 20 0.13746 3.41445 2.82408 3.31937 20 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 21 0.13746 3.41445 2.82408 3.31937 21 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 22 2.97122 3.62232 0.11345 3.53061 22 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 23 2.97122 3.62232 0.11345 3.53061 23 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 24 3.47246 0.12561 3.52023 2.85755 24 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 25 3.12325 2.61715 3.17007 0.17319 25 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 26 0.13746 3.41445 2.82408 3.31937 26 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 27 3.47246 0.12561 3.52023 2.85755 27 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 28 3.47246 0.12561 3.52023 2.85755 28 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 29 3.47246 0.12561 3.52023 2.85755 29 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 30 2.97122 3.62232 0.11345 3.53061 30 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 31 3.47246 0.12561 3.52023 2.85755 31 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 32 3.12325 2.61715 3.17007 0.17319 32 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 33 2.97122 3.62232 0.11345 3.53061 33 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 34 0.13746 3.41445 2.82408 3.31937 34 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 35 0.13746 3.41445 2.82408 3.31937 35 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 36 3.12325 2.61715 3.17007 0.17319 36 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 37 3.12325 2.61715 3.17007 0.17319 37 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 38 3.12325 2.61715 3.17007 0.17319 38 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 39 0.13746 3.41445 2.82408 3.31937 39 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 40 0.13746 3.41445 2.82408 3.31937 40 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 41 2.97122 3.62232 0.11345 3.53061 41 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 42 3.47246 0.12561 3.52023 2.85755 42 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 43 0.13746 3.41445 2.82408 3.31937 43 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 44 3.12325 2.61715 3.17007 0.17319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03616 4.03094 4.03094 1.46634 0.26236 1.09861 0.40547 45 0.13746 3.41445 2.82408 3.31937 45 - - 1.38629 1.38629 1.38629 1.38629 0.01824 4.01303 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eightf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:41 2012 NSEQ 3 EFFN 3.000000 CKSUM 996407087 STATS LOCAL MSV -8.1735 0.72048 STATS LOCAL VITERBI -7.7269 0.72048 STATS LOCAL FORWARD -3.9301 0.72048 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11576 1.38962 1.68550 1.43626 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eightg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:47 2012 NSEQ 3 EFFN 3.000000 CKSUM 818586296 STATS LOCAL MSV -8.0297 0.72074 STATS LOCAL VITERBI -7.7589 0.72074 STATS LOCAL FORWARD -3.8190 0.72074 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11716 1.25292 1.78063 1.52054 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.43088 1.34923 2.50068 0.56112 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:57:18 2012 NSEQ 2 EFFN 2.000000 CKSUM 1725590445 STATS LOCAL MSV -7.5776 0.72814 STATS LOCAL VITERBI -8.3322 0.72814 STATS LOCAL FORWARD -3.5527 0.72814 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23965 1.39937 1.49627 1.42797 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:43 2012 NSEQ 6 EFFN 3.237305 CKSUM 3693209712 STATS LOCAL MSV -7.9784 0.71932 STATS LOCAL VITERBI -7.6145 0.71932 STATS LOCAL FORWARD -4.1523 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28148 1.14624 1.52996 1.67131 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 0.00000 * 1 3.40113 0.13409 3.45193 2.80566 1 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 2 3.06071 2.57738 3.10992 0.18324 2 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 3 3.40113 0.13409 3.45193 2.80566 3 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 4 3.40113 0.13409 3.45193 2.80566 4 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 5 2.92809 3.55954 0.12029 3.46131 5 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 6 0.14561 3.35254 2.78388 3.25159 6 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 7 3.40113 0.13409 3.45193 2.80566 7 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 8 3.40113 0.13409 3.45193 2.80566 8 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 9 3.06071 2.57738 3.10992 0.18324 9 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 10 3.40113 0.13409 3.45193 2.80566 10 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 11 0.14561 3.35254 2.78388 3.25159 11 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 12 2.92809 3.55954 0.12029 3.46131 12 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 13 0.14561 3.35254 2.78388 3.25159 13 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 14 3.06071 2.57738 3.10992 0.18324 14 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 15 3.40113 0.13409 3.45193 2.80566 15 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 16 0.14561 3.35254 2.78388 3.25159 16 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 17 2.92809 3.55954 0.12029 3.46131 17 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 18 2.92809 3.55954 0.12029 3.46131 18 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 19 3.40113 0.13409 3.45193 2.80566 19 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 20 2.92809 3.55954 0.12029 3.46131 20 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 21 0.14561 3.35254 2.78388 3.25159 21 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 22 2.92809 3.55954 0.12029 3.46131 22 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 23 0.14561 3.35254 2.78388 3.25159 23 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 24 3.40113 0.13409 3.45193 2.80566 24 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 25 2.69920 1.80781 2.76119 0.34883 25 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 26 0.14561 3.35254 2.78388 3.25159 26 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 27 3.40113 0.13409 3.45193 2.80566 27 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 28 2.92809 3.55954 0.12029 3.46131 28 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 29 3.40113 0.13409 3.45193 2.80566 29 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 30 3.40113 0.13409 3.45193 2.80566 30 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 31 3.40113 0.13409 3.45193 2.80566 31 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 32 3.06071 2.57738 3.10992 0.18324 32 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 33 2.92809 3.55954 0.12029 3.46131 33 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 34 0.14561 3.35254 2.78388 3.25159 34 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 35 0.14561 3.35254 2.78388 3.25159 35 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 36 3.40113 0.13409 3.45193 2.80566 36 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 37 3.06071 2.57738 3.10992 0.18324 37 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 38 3.06071 2.57738 3.10992 0.18324 38 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 39 0.14561 3.35254 2.78388 3.25159 39 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 40 0.14561 3.35254 2.78388 3.25159 40 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 41 2.92809 3.55954 0.12029 3.46131 41 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 42 3.40113 0.13409 3.45193 2.80566 42 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 43 0.14561 3.35254 2.78388 3.25159 43 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 44 3.06071 2.57738 3.10992 0.18324 44 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 45 0.14561 3.35254 2.78388 3.25159 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97731 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fifty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:45 2012 NSEQ 2 EFFN 2.000000 CKSUM 3588865177 STATS LOCAL MSV -7.6416 0.72809 STATS LOCAL VITERBI -8.1785 0.72809 STATS LOCAL FORWARD -3.3202 0.72809 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29441 1.23704 1.57164 1.47844 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:41:05 2012 NSEQ 3 EFFN 3.000000 CKSUM 2941133694 STATS LOCAL MSV -8.1652 0.72067 STATS LOCAL VITERBI -7.6786 0.72067 STATS LOCAL FORWARD -3.8005 0.72067 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16779 1.29306 1.59776 1.55037 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.43223 0.62271 2.50508 1.22417 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:37 2012 NSEQ 3 EFFN 3.000000 CKSUM 169487606 STATS LOCAL MSV -7.9297 0.72040 STATS LOCAL VITERBI -7.7017 0.72040 STATS LOCAL FORWARD -4.0414 0.72040 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28208 1.14532 1.52431 1.67853 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.43088 1.34923 2.50068 0.56112 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.86982 3.47591 0.13017 3.36931 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:28 2012 NSEQ 4 EFFN 3.363281 CKSUM 3978608917 STATS LOCAL MSV -8.1693 0.71933 STATS LOCAL VITERBI -7.5580 0.71933 STATS LOCAL FORWARD -4.1977 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21441 1.30452 1.49557 1.57171 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 * 1 3.10166 2.60344 3.14932 0.17659 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 2 2.95651 3.60084 0.11574 3.50687 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 3 3.10166 2.60344 3.14932 0.17659 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 4 3.44798 0.12845 3.49681 2.83981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 5 2.95651 3.60084 0.11574 3.50687 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 6 0.14020 3.39317 2.81030 3.29606 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 7 3.44798 0.12845 3.49681 2.83981 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 8 3.44798 0.12845 3.49681 2.83981 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 9 3.10166 2.60344 3.14932 0.17659 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 10 3.44798 0.12845 3.49681 2.83981 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 11 0.14020 3.39317 2.81030 3.29606 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 12 2.06759 1.02509 0.97430 1.98565 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 13 0.14020 3.39317 2.81030 3.29606 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 14 3.10166 2.60344 3.14932 0.17659 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 15 3.44798 0.12845 3.49681 2.83981 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 16 0.14020 3.39317 2.81030 3.29606 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 17 2.95651 3.60084 0.11574 3.50687 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 18 2.95651 3.60084 0.11574 3.50687 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 19 3.44798 0.12845 3.49681 2.83981 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 20 2.95651 3.60084 0.11574 3.50687 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 21 0.14020 3.39317 2.81030 3.29606 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 22 2.95651 3.60084 0.11574 3.50687 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 23 0.14020 3.39317 2.81030 3.29606 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 24 3.44798 0.12845 3.49681 2.83981 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 25 0.14020 3.39317 2.81030 3.29606 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 26 0.14020 3.39317 2.81030 3.29606 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 27 3.44798 0.12845 3.49681 2.83981 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 28 3.44798 0.12845 3.49681 2.83981 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 29 3.44798 0.12845 3.49681 2.83981 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 30 2.95651 3.60084 0.11574 3.50687 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 31 3.44798 0.12845 3.49681 2.83981 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 32 3.10166 2.60344 3.14932 0.17659 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 33 2.95651 3.60084 0.11574 3.50687 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 34 0.14020 3.39317 2.81030 3.29606 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 35 0.14020 3.39317 2.81030 3.29606 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 36 3.10166 2.60344 3.14932 0.17659 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 37 3.10166 2.60344 3.14932 0.17659 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 38 3.10166 2.60344 3.14932 0.17659 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 39 0.14020 3.39317 2.81030 3.29606 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 40 0.14020 3.39317 2.81030 3.29606 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 41 2.95651 3.60084 0.11574 3.50687 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 42 3.44798 0.12845 3.49681 2.83981 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 43 0.14020 3.39317 2.81030 3.29606 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 44 3.10166 2.60344 3.14932 0.17659 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 45 0.14020 3.39317 2.81030 3.29606 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00063 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:41:16 2012 NSEQ 3 EFFN 3.000000 CKSUM 1744694786 STATS LOCAL MSV -7.9097 0.72088 STATS LOCAL VITERBI -7.7741 0.72088 STATS LOCAL FORWARD -3.9482 0.72088 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21864 1.51265 1.51502 1.33090 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.43088 1.34923 2.50068 0.56112 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:54 2012 NSEQ 2 EFFN 2.000000 CKSUM 7046851 STATS LOCAL MSV -7.6652 0.72933 STATS LOCAL VITERBI -8.2495 0.72933 STATS LOCAL FORWARD -3.3659 0.72933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22961 1.37917 1.44642 1.51234 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 1.88179 1.10717 1.04597 1.79675 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 1.89532 1.96405 1.06955 1.00436 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:55 2012 NSEQ 3 EFFN 3.000000 CKSUM 1156733467 STATS LOCAL MSV -8.0424 0.72110 STATS LOCAL VITERBI -7.9132 0.72110 STATS LOCAL FORWARD -4.1416 0.72110 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13098 1.31158 1.66327 1.52155 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.53825 2.56454 1.38402 2.42241 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.43258 1.35379 2.50233 0.55855 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:47 2012 NSEQ 2 EFFN 2.000000 CKSUM 788693777 STATS LOCAL MSV -7.4171 0.72882 STATS LOCAL VITERBI -8.2608 0.72882 STATS LOCAL FORWARD -3.5113 0.72882 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21578 1.39607 1.53509 1.42497 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.92825 2.28391 0.95698 2.13014 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:15 2012 NSEQ 6 EFFN 3.770508 CKSUM 3616590276 STATS LOCAL MSV -7.2567 0.71932 STATS LOCAL VITERBI -7.6107 0.71932 STATS LOCAL FORWARD -4.2424 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22316 1.36172 1.52650 1.46021 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 0.00000 * 1 2.25146 2.22866 1.37358 0.62758 1 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 2 2.20737 2.32313 0.66481 1.28132 2 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 3 2.58882 1.33574 2.65600 0.52476 3 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 4 3.58586 0.11338 3.62859 2.93895 4 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 5 3.03835 3.72114 0.10355 3.64005 5 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 6 0.12549 3.51350 2.88787 3.42806 6 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 7 3.58586 0.11338 3.62859 2.93895 7 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 8 3.58586 0.11338 3.62859 2.93895 8 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 9 3.22519 2.68179 3.26804 0.15814 9 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 10 3.58586 0.11338 3.62859 2.93895 10 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 11 0.12549 3.51350 2.88787 3.42806 11 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 12 3.03835 3.72114 0.10355 3.64005 12 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 13 0.12549 3.51350 2.88787 3.42806 13 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 14 3.22519 2.68179 3.26804 0.15814 14 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 15 3.58586 0.11338 3.62859 2.93895 15 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 16 0.12549 3.51350 2.88787 3.42806 16 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 17 3.03835 3.72114 0.10355 3.64005 17 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 18 0.12549 3.51350 2.88787 3.42806 18 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 19 3.58586 0.11338 3.62859 2.93895 19 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 20 3.03835 3.72114 0.10355 3.64005 20 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 21 0.50286 2.71339 1.37489 2.57673 21 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 22 3.03835 3.72114 0.10355 3.64005 22 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 23 0.12549 3.51350 2.88787 3.42806 23 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 24 3.22519 2.68179 3.26804 0.15814 24 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 25 3.22519 2.68179 3.26804 0.15814 25 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 26 0.12549 3.51350 2.88787 3.42806 26 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 27 3.58586 0.11338 3.62859 2.93895 27 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 28 3.58586 0.11338 3.62859 2.93895 28 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 29 3.58586 0.11338 3.62859 2.93895 29 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 30 3.03835 3.72114 0.10355 3.64005 30 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 31 3.58586 0.11338 3.62859 2.93895 31 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 32 3.22519 2.68179 3.26804 0.15814 32 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 33 3.03835 3.72114 0.10355 3.64005 33 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 34 0.12549 3.51350 2.88787 3.42806 34 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 35 0.12549 3.51350 2.88787 3.42806 35 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 36 3.22519 2.68179 3.26804 0.15814 36 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 37 3.22519 2.68179 3.26804 0.15814 37 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 38 3.22519 2.68179 3.26804 0.15814 38 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 39 0.12549 3.51350 2.88787 3.42806 39 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 40 0.12549 3.51350 2.88787 3.42806 40 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 41 3.03835 3.72114 0.10355 3.64005 41 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 42 3.58586 0.11338 3.62859 2.93895 42 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 43 0.12549 3.51350 2.88787 3.42806 43 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 44 3.22519 2.68179 3.26804 0.15814 44 - - 1.38629 1.38629 1.38629 1.38629 0.03407 4.08942 4.08942 1.46634 0.26236 1.09861 0.40547 45 0.12549 3.51350 2.88787 3.42806 45 - - 1.38629 1.38629 1.38629 1.38629 0.01718 4.07253 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiftytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:40:04 2012 NSEQ 4 EFFN 3.386719 CKSUM 2343365187 STATS LOCAL MSV -7.6766 0.71933 STATS LOCAL VITERBI -7.6091 0.71933 STATS LOCAL FORWARD -3.8781 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15940 1.37200 1.52000 1.54170 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 * 1 3.10913 2.60819 3.15650 0.17540 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 2 3.10913 2.60819 3.15650 0.17540 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 3 2.96162 3.60830 0.11494 3.51511 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 4 3.45647 0.12746 3.50493 2.84597 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 5 2.96162 3.60830 0.11494 3.51511 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 6 0.13925 3.40055 2.81508 3.30414 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 7 3.45647 0.12746 3.50493 2.84597 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 8 3.45647 0.12746 3.50493 2.84597 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 9 3.10913 2.60819 3.15650 0.17540 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 10 3.45647 0.12746 3.50493 2.84597 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 11 0.13925 3.40055 2.81508 3.30414 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 12 2.96162 3.60830 0.11494 3.51511 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 13 0.13925 3.40055 2.81508 3.30414 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 14 2.96162 3.60830 0.11494 3.51511 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 15 3.45647 0.12746 3.50493 2.84597 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 16 0.13925 3.40055 2.81508 3.30414 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 17 2.96162 3.60830 0.11494 3.51511 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 18 2.96162 3.60830 0.11494 3.51511 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 19 3.45647 0.12746 3.50493 2.84597 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 20 0.13925 3.40055 2.81508 3.30414 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 21 0.13925 3.40055 2.81508 3.30414 21 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 22 2.96162 3.60830 0.11494 3.51511 22 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 23 0.13925 3.40055 2.81508 3.30414 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 24 2.61564 1.57295 2.68080 0.42934 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 25 3.10913 2.60819 3.15650 0.17540 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 26 0.13925 3.40055 2.81508 3.30414 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 27 3.45647 0.12746 3.50493 2.84597 27 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 28 3.45647 0.12746 3.50493 2.84597 28 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 29 3.45647 0.12746 3.50493 2.84597 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 30 2.96162 3.60830 0.11494 3.51511 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 31 3.45647 0.12746 3.50493 2.84597 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 32 2.61564 1.57295 2.68080 0.42934 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 33 0.13925 3.40055 2.81508 3.30414 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 34 0.13925 3.40055 2.81508 3.30414 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 35 0.13925 3.40055 2.81508 3.30414 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 36 3.10913 2.60819 3.15650 0.17540 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 37 3.10913 2.60819 3.15650 0.17540 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 38 3.10913 2.60819 3.15650 0.17540 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 39 0.13925 3.40055 2.81508 3.30414 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 40 0.13925 3.40055 2.81508 3.30414 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 41 2.96162 3.60830 0.11494 3.51511 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 42 3.45647 0.12746 3.50493 2.84597 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 43 0.13925 3.40055 2.81508 3.30414 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 44 3.10913 2.60819 3.15650 0.17540 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 45 0.13925 3.40055 2.81508 3.30414 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00492 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:55 2012 NSEQ 33 EFFN 3.323364 CKSUM 2448807355 STATS LOCAL MSV -8.2738 0.71933 STATS LOCAL VITERBI -7.5799 0.71933 STATS LOCAL FORWARD -4.1726 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27412 1.31929 1.52432 1.44720 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 0.00000 * 1 2.16430 2.15934 2.34011 0.39534 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 2 3.43336 0.13018 3.48281 2.82918 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 3 3.08883 2.59528 3.13698 0.17864 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 4 3.08883 2.59528 3.13698 0.17864 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 5 2.94768 3.58798 0.11714 3.49267 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 6 0.14187 3.38048 2.80207 3.28217 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 7 3.43336 0.13018 3.48281 2.82918 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 8 3.43336 0.13018 3.48281 2.82918 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 9 3.08883 2.59528 3.13698 0.17864 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 10 3.43336 0.13018 3.48281 2.82918 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 11 0.14187 3.38048 2.80207 3.28217 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 12 2.94768 3.58798 0.11714 3.49267 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 13 0.14187 3.38048 2.80207 3.28217 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 14 3.08883 2.59528 3.13698 0.17864 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 15 3.43336 0.13018 3.48281 2.82918 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 16 0.14187 3.38048 2.80207 3.28217 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 17 2.94768 3.58798 0.11714 3.49267 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 18 2.94768 3.58798 0.11714 3.49267 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 19 3.43336 0.13018 3.48281 2.82918 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 20 0.14187 3.38048 2.80207 3.28217 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 21 0.14187 3.38048 2.80207 3.28217 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 22 2.94768 3.58798 0.11714 3.49267 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 23 2.94768 3.58798 0.11714 3.49267 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 24 3.43336 0.13018 3.48281 2.82918 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 25 3.08883 2.59528 3.13698 0.17864 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 26 0.14187 3.38048 2.80207 3.28217 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 27 3.43336 0.13018 3.48281 2.82918 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 28 3.43336 0.13018 3.48281 2.82918 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 29 3.43336 0.13018 3.48281 2.82918 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 30 2.94768 3.58798 0.11714 3.49267 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 31 3.43336 0.13018 3.48281 2.82918 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 32 3.08883 2.59528 3.13698 0.17864 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 33 2.94768 3.58798 0.11714 3.49267 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 34 0.14187 3.38048 2.80207 3.28217 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 35 0.14187 3.38048 2.80207 3.28217 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 36 3.08883 2.59528 3.13698 0.17864 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 37 3.08883 2.59528 3.13698 0.17864 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 38 3.08883 2.59528 3.13698 0.17864 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 39 0.14187 3.38048 2.80207 3.28217 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 40 0.14187 3.38048 2.80207 3.28217 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 41 2.94768 3.58798 0.11714 3.49267 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 42 3.43336 0.13018 3.48281 2.82918 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 43 0.14187 3.38048 2.80207 3.28217 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 44 3.08883 2.59528 3.13698 0.17864 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 45 0.14187 3.38048 2.80207 3.28217 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99330 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:02 2012 NSEQ 6 EFFN 3.290039 CKSUM 1095388467 STATS LOCAL MSV -8.1640 0.71933 STATS LOCAL VITERBI -7.6720 0.71933 STATS LOCAL FORWARD -4.1206 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22038 1.38745 1.60911 1.36608 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 0.00000 * 1 3.07802 2.58840 3.12657 0.18039 1 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 2 3.07802 2.58840 3.12657 0.18039 2 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 3 3.07802 2.58840 3.12657 0.18039 3 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 4 3.07802 2.58840 3.12657 0.18039 4 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 5 2.94018 3.57708 0.11833 3.48065 5 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 6 0.14329 3.36976 2.79509 3.27043 6 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 7 3.42100 0.13166 3.47097 2.82017 7 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 8 3.42100 0.13166 3.47097 2.82017 8 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 9 3.07802 2.58840 3.12657 0.18039 9 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 10 3.42100 0.13166 3.47097 2.82017 10 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 11 0.14329 3.36976 2.79509 3.27043 11 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 12 2.94018 3.57708 0.11833 3.48065 12 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 13 0.14329 3.36976 2.79509 3.27043 13 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 14 3.07802 2.58840 3.12657 0.18039 14 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 15 3.42100 0.13166 3.47097 2.82017 15 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 16 0.14329 3.36976 2.79509 3.27043 16 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 17 2.94018 3.57708 0.11833 3.48065 17 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 18 2.94018 3.57708 0.11833 3.48065 18 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 19 3.42100 0.13166 3.47097 2.82017 19 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 20 0.14329 3.36976 2.79509 3.27043 20 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 21 0.14329 3.36976 2.79509 3.27043 21 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 22 2.94018 3.57708 0.11833 3.48065 22 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 23 0.14329 3.36976 2.79509 3.27043 23 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 24 3.42100 0.13166 3.47097 2.82017 24 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 25 3.07802 2.58840 3.12657 0.18039 25 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 26 0.14329 3.36976 2.79509 3.27043 26 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 27 3.42100 0.13166 3.47097 2.82017 27 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 28 3.42100 0.13166 3.47097 2.82017 28 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 29 3.42100 0.13166 3.47097 2.82017 29 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 30 2.94018 3.57708 0.11833 3.48065 30 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 31 3.42100 0.13166 3.47097 2.82017 31 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 32 3.07802 2.58840 3.12657 0.18039 32 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 33 2.94018 3.57708 0.11833 3.48065 33 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 34 0.14329 3.36976 2.79509 3.27043 34 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 35 0.14329 3.36976 2.79509 3.27043 35 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 36 3.07802 2.58840 3.12657 0.18039 36 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 37 3.07802 2.58840 3.12657 0.18039 37 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 38 3.07802 2.58840 3.12657 0.18039 38 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 39 0.14329 3.36976 2.79509 3.27043 39 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 40 0.14329 3.36976 2.79509 3.27043 40 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 41 2.94018 3.57708 0.11833 3.48065 41 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 42 3.42100 0.13166 3.47097 2.82017 42 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 43 0.14329 3.36976 2.79509 3.27043 43 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 44 3.07802 2.58840 3.12657 0.18039 44 - - 1.38629 1.38629 1.38629 1.38629 0.03711 4.00552 4.00552 1.46634 0.26236 1.09861 0.40547 45 0.14329 3.36976 2.79509 3.27043 45 - - 1.38629 1.38629 1.38629 1.38629 0.01873 3.98714 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:10 2012 NSEQ 3 EFFN 3.000000 CKSUM 414395773 STATS LOCAL MSV -8.1682 0.72059 STATS LOCAL VITERBI -7.7080 0.72059 STATS LOCAL FORWARD -4.1086 0.72059 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39094 1.26436 1.40758 1.49610 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 1.34853 2.58976 0.54705 2.44542 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fived_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:18 2012 NSEQ 4 EFFN 3.589844 CKSUM 1898865493 STATS LOCAL MSV -7.7769 0.71931 STATS LOCAL VITERBI -7.5481 0.71931 STATS LOCAL FORWARD -4.2512 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28279 1.32952 1.52116 1.42847 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 0.00000 * 1 2.65559 1.56074 2.72005 0.42482 1 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 2 1.56999 0.53851 2.39137 2.14706 2 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 3 3.17200 2.64808 3.21693 0.16580 3 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 4 3.17200 2.64808 3.21693 0.16580 4 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 5 3.00379 3.67013 0.10853 3.58350 5 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 6 0.13155 3.46211 2.85483 3.37163 6 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 7 3.52715 0.11953 3.57252 2.89697 7 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 8 3.52715 0.11953 3.57252 2.89697 8 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 9 3.17200 2.64808 3.21693 0.16580 9 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 10 3.52715 0.11953 3.57252 2.89697 10 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 11 0.13155 3.46211 2.85483 3.37163 11 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 12 3.00379 3.67013 0.10853 3.58350 12 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 13 0.13155 3.46211 2.85483 3.37163 13 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 14 3.17200 2.64808 3.21693 0.16580 14 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 15 3.52715 0.11953 3.57252 2.89697 15 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 16 0.13155 3.46211 2.85483 3.37163 16 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 17 3.00379 3.67013 0.10853 3.58350 17 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 18 3.00379 3.67013 0.10853 3.58350 18 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 19 3.52715 0.11953 3.57252 2.89697 19 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 20 0.13155 3.46211 2.85483 3.37163 20 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 21 0.13155 3.46211 2.85483 3.37163 21 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 22 3.00379 3.67013 0.10853 3.58350 22 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 23 3.00379 3.67013 0.10853 3.58350 23 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 24 3.52715 0.11953 3.57252 2.89697 24 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 25 3.17200 2.64808 3.21693 0.16580 25 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 26 0.13155 3.46211 2.85483 3.37163 26 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 27 3.52715 0.11953 3.57252 2.89697 27 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 28 3.52715 0.11953 3.57252 2.89697 28 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 29 3.52715 0.11953 3.57252 2.89697 29 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 30 3.00379 3.67013 0.10853 3.58350 30 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 31 3.52715 0.11953 3.57252 2.89697 31 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 32 3.17200 2.64808 3.21693 0.16580 32 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 33 3.00379 3.67013 0.10853 3.58350 33 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 34 0.51549 2.41965 2.31139 1.53844 34 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 35 0.13155 3.46211 2.85483 3.37163 35 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 36 3.17200 2.64808 3.21693 0.16580 36 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 37 3.17200 2.64808 3.21693 0.16580 37 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 38 3.17200 2.64808 3.21693 0.16580 38 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 39 0.13155 3.46211 2.85483 3.37163 39 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 40 0.13155 3.46211 2.85483 3.37163 40 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 41 3.00379 3.67013 0.10853 3.58350 41 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 42 3.52715 0.11953 3.57252 2.89697 42 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 43 0.13155 3.46211 2.85483 3.37163 43 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 44 3.17200 2.64808 3.21693 0.16580 44 - - 1.38629 1.38629 1.38629 1.38629 0.03515 4.05869 4.05869 1.46634 0.26236 1.09861 0.40547 45 0.13155 3.46211 2.85483 3.37163 45 - - 1.38629 1.38629 1.38629 1.38629 0.01773 4.04127 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:24 2012 NSEQ 18 EFFN 3.440918 CKSUM 2904005102 STATS LOCAL MSV -7.8258 0.71932 STATS LOCAL VITERBI -7.5534 0.71932 STATS LOCAL FORWARD -4.0810 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15979 1.37418 1.69811 1.38480 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 0.00000 * 1 2.65643 1.62968 2.72042 0.40352 1 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 2 3.22289 0.18400 3.27858 2.40191 2 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 3 3.12623 2.61905 3.17294 0.17273 3 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 4 3.12623 2.61905 3.17294 0.17273 4 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 5 0.13709 3.41738 2.82598 3.32258 5 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 6 0.13709 3.41738 2.82598 3.32258 6 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 7 3.47583 0.12523 3.52346 2.85999 7 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 8 3.47583 0.12523 3.52346 2.85999 8 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 9 3.12623 2.61905 3.17294 0.17273 9 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 10 3.47583 0.12523 3.52346 2.85999 10 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 11 0.13709 3.41738 2.82598 3.32258 11 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 12 2.97325 3.62528 0.11314 3.53388 12 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 13 0.13709 3.41738 2.82598 3.32258 13 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 14 3.12623 2.61905 3.17294 0.17273 14 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 15 3.47583 0.12523 3.52346 2.85999 15 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 16 0.13709 3.41738 2.82598 3.32258 16 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 17 2.97325 3.62528 0.11314 3.53388 17 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 18 2.97325 3.62528 0.11314 3.53388 18 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 19 3.47583 0.12523 3.52346 2.85999 19 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 20 0.13709 3.41738 2.82598 3.32258 20 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 21 0.13709 3.41738 2.82598 3.32258 21 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 22 2.97325 3.62528 0.11314 3.53388 22 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 23 0.13709 3.41738 2.82598 3.32258 23 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 24 2.85715 2.02037 2.91409 0.28010 24 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 25 3.12623 2.61905 3.17294 0.17273 25 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 26 0.13709 3.41738 2.82598 3.32258 26 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 27 3.47583 0.12523 3.52346 2.85999 27 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 28 3.47583 0.12523 3.52346 2.85999 28 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 29 3.47583 0.12523 3.52346 2.85999 29 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 30 2.97325 3.62528 0.11314 3.53388 30 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 31 3.47583 0.12523 3.52346 2.85999 31 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 32 3.12623 2.61905 3.17294 0.17273 32 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 33 2.97325 3.62528 0.11314 3.53388 33 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 34 0.13709 3.41738 2.82598 3.32258 34 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 35 0.13709 3.41738 2.82598 3.32258 35 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 36 3.12623 2.61905 3.17294 0.17273 36 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 37 3.12623 2.61905 3.17294 0.17273 37 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 38 3.12623 2.61905 3.17294 0.17273 38 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 39 0.13709 3.41738 2.82598 3.32258 39 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 40 0.13709 3.41738 2.82598 3.32258 40 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 41 2.97325 3.62528 0.11314 3.53388 41 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 42 3.47583 0.12523 3.52346 2.85999 42 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 43 0.13709 3.41738 2.82598 3.32258 43 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 44 3.12623 2.61905 3.17294 0.17273 44 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03263 4.03263 1.46634 0.26236 1.09861 0.40547 45 0.13709 3.41738 2.82598 3.32258 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01475 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:31 2012 NSEQ 4 EFFN 3.238281 CKSUM 218697528 STATS LOCAL MSV -8.1769 0.71931 STATS LOCAL VITERBI -7.6530 0.71931 STATS LOCAL FORWARD -4.0168 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11219 1.32828 1.60560 1.58251 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 3.40150 0.13404 3.45229 2.80593 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 0.14557 3.35286 2.78409 3.25194 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 0.14557 3.35286 2.78409 3.25194 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.06103 2.57758 3.11024 0.18319 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 2.92831 3.55987 0.12026 3.46167 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 0.14557 3.35286 2.78409 3.25194 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 3.40150 0.13404 3.45229 2.80593 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.40150 0.13404 3.45229 2.80593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 3.06103 2.57758 3.11024 0.18319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 3.40150 0.13404 3.45229 2.80593 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 0.14557 3.35286 2.78409 3.25194 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 2.92831 3.55987 0.12026 3.46167 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 0.14557 3.35286 2.78409 3.25194 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 3.40150 0.13404 3.45229 2.80593 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 0.14557 3.35286 2.78409 3.25194 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 2.92831 3.55987 0.12026 3.46167 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 2.92831 3.55987 0.12026 3.46167 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 3.40150 0.13404 3.45229 2.80593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 0.14557 3.35286 2.78409 3.25194 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 0.14557 3.35286 2.78409 3.25194 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 2.92831 3.55987 0.12026 3.46167 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 0.14557 3.35286 2.78409 3.25194 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 3.40150 0.13404 3.45229 2.80593 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 3.06103 2.57758 3.11024 0.18319 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 0.14557 3.35286 2.78409 3.25194 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 3.40150 0.13404 3.45229 2.80593 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.40150 0.13404 3.45229 2.80593 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 2.92831 3.55987 0.12026 3.46167 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 3.40150 0.13404 3.45229 2.80593 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 3.06103 2.57758 3.11024 0.18319 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 2.92831 3.55987 0.12026 3.46167 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 0.14557 3.35286 2.78409 3.25194 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 0.14557 3.35286 2.78409 3.25194 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 3.06103 2.57758 3.11024 0.18319 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 3.06103 2.57758 3.11024 0.18319 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.06103 2.57758 3.11024 0.18319 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 0.14557 3.35286 2.78409 3.25194 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 0.14557 3.35286 2.78409 3.25194 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 2.92831 3.55987 0.12026 3.46167 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 3.40150 0.13404 3.45229 2.80593 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 0.14557 3.35286 2.78409 3.25194 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 3.06103 2.57758 3.11024 0.18319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 0.14557 3.35286 2.78409 3.25194 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:38 2012 NSEQ 3 EFFN 3.000000 CKSUM 117876825 STATS LOCAL MSV -8.1355 0.72022 STATS LOCAL VITERBI -7.5293 0.72022 STATS LOCAL FORWARD -4.1705 0.72022 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22000 1.46772 1.37224 1.51058 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:44 2012 NSEQ 3 EFFN 3.000000 CKSUM 3959841855 STATS LOCAL MSV -7.8534 0.72044 STATS LOCAL VITERBI -7.7389 0.72044 STATS LOCAL FORWARD -4.0256 0.72044 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16687 1.25924 1.51839 1.68347 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.43088 1.34923 2.50068 0.56112 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:50 2012 NSEQ 4 EFFN 3.292969 CKSUM 2067499997 STATS LOCAL MSV -8.3581 0.71933 STATS LOCAL VITERBI -7.5385 0.71933 STATS LOCAL FORWARD -4.2980 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39697 1.26146 1.40117 1.50011 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 0.00000 * 1 3.07897 2.58901 3.12749 0.18024 1 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 2 3.42209 0.13153 3.47201 2.82097 2 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 3 3.07897 2.58901 3.12749 0.18024 3 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 4 1.65496 2.81433 0.38529 2.67796 4 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 5 2.94085 3.57805 0.11823 3.48171 5 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 6 0.14316 3.37070 2.79571 3.27146 6 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 7 3.42209 0.13153 3.47201 2.82097 7 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 8 3.42209 0.13153 3.47201 2.82097 8 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 9 3.07897 2.58901 3.12749 0.18024 9 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 10 3.42209 0.13153 3.47201 2.82097 10 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 11 2.94085 3.57805 0.11823 3.48171 11 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 12 2.94085 3.57805 0.11823 3.48171 12 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 13 0.14316 3.37070 2.79571 3.27146 13 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 14 3.07897 2.58901 3.12749 0.18024 14 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 15 3.42209 0.13153 3.47201 2.82097 15 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 16 0.14316 3.37070 2.79571 3.27146 16 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 17 2.94085 3.57805 0.11823 3.48171 17 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 18 2.94085 3.57805 0.11823 3.48171 18 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 19 3.42209 0.13153 3.47201 2.82097 19 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 20 3.42209 0.13153 3.47201 2.82097 20 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 21 0.14316 3.37070 2.79571 3.27146 21 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 22 2.94085 3.57805 0.11823 3.48171 22 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 23 2.94085 3.57805 0.11823 3.48171 23 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 24 3.42209 0.13153 3.47201 2.82097 24 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 25 3.07897 2.58901 3.12749 0.18024 25 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 26 0.14316 3.37070 2.79571 3.27146 26 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 27 3.42209 0.13153 3.47201 2.82097 27 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 28 3.42209 0.13153 3.47201 2.82097 28 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 29 3.42209 0.13153 3.47201 2.82097 29 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 30 2.94085 3.57805 0.11823 3.48171 30 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 31 3.42209 0.13153 3.47201 2.82097 31 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 32 3.07897 2.58901 3.12749 0.18024 32 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 33 2.94085 3.57805 0.11823 3.48171 33 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 34 0.14316 3.37070 2.79571 3.27146 34 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 35 0.14316 3.37070 2.79571 3.27146 35 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 36 3.07897 2.58901 3.12749 0.18024 36 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 37 3.07897 2.58901 3.12749 0.18024 37 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 38 3.07897 2.58901 3.12749 0.18024 38 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 39 0.14316 3.37070 2.79571 3.27146 39 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 40 0.14316 3.37070 2.79571 3.27146 40 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 41 2.94085 3.57805 0.11823 3.48171 41 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 42 3.42209 0.13153 3.47201 2.82097 42 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 43 0.14316 3.37070 2.79571 3.27146 43 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 44 3.07897 2.58901 3.12749 0.18024 44 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 45 0.14316 3.37070 2.79571 3.27146 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98768 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:52:57 2012 NSEQ 14 EFFN 3.216309 CKSUM 1938204490 STATS LOCAL MSV -8.1797 0.71931 STATS LOCAL VITERBI -7.6430 0.71931 STATS LOCAL FORWARD -3.9981 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.41013 1.20320 1.45583 1.50305 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 * 1 3.39312 0.13508 3.44425 2.79979 1 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 2 3.39312 0.13508 3.44425 2.79979 2 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 3 3.05375 2.57294 3.10323 0.18440 3 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 4 2.92319 3.55246 0.12110 3.45350 4 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 5 2.92319 3.55246 0.12110 3.45350 5 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 6 0.14656 3.34560 2.77935 3.24400 6 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 7 3.39312 0.13508 3.44425 2.79979 7 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 8 3.39312 0.13508 3.44425 2.79979 8 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 9 3.05375 2.57294 3.10323 0.18440 9 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 10 3.39312 0.13508 3.44425 2.79979 10 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 11 0.14656 3.34560 2.77935 3.24400 11 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 12 2.92319 3.55246 0.12110 3.45350 12 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 13 3.39312 0.13508 3.44425 2.79979 13 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 14 3.05375 2.57294 3.10323 0.18440 14 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 15 3.39312 0.13508 3.44425 2.79979 15 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 16 0.14656 3.34560 2.77935 3.24400 16 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 17 2.92319 3.55246 0.12110 3.45350 17 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 18 2.92319 3.55246 0.12110 3.45350 18 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 19 3.39312 0.13508 3.44425 2.79979 19 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 20 2.92319 3.55246 0.12110 3.45350 20 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 21 3.05375 2.57294 3.10323 0.18440 21 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 22 2.92319 3.55246 0.12110 3.45350 22 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 23 0.14656 3.34560 2.77935 3.24400 23 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 24 3.39312 0.13508 3.44425 2.79979 24 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 25 3.05375 2.57294 3.10323 0.18440 25 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 26 0.14656 3.34560 2.77935 3.24400 26 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 27 3.39312 0.13508 3.44425 2.79979 27 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 28 3.39312 0.13508 3.44425 2.79979 28 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 29 3.39312 0.13508 3.44425 2.79979 29 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 30 2.92319 3.55246 0.12110 3.45350 30 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 31 3.39312 0.13508 3.44425 2.79979 31 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 32 3.05375 2.57294 3.10323 0.18440 32 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 33 2.92319 3.55246 0.12110 3.45350 33 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 34 0.14656 3.34560 2.77935 3.24400 34 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 35 0.14656 3.34560 2.77935 3.24400 35 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 36 3.05375 2.57294 3.10323 0.18440 36 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 37 3.05375 2.57294 3.10323 0.18440 37 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 38 3.05375 2.57294 3.10323 0.18440 38 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 39 0.14656 3.34560 2.77935 3.24400 39 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 40 0.14656 3.34560 2.77935 3.24400 40 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 41 2.92319 3.55246 0.12110 3.45350 41 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 42 3.39312 0.13508 3.44425 2.79979 42 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 43 0.14656 3.34560 2.77935 3.24400 43 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 44 3.05375 2.57294 3.10323 0.18440 44 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 45 0.14656 3.34560 2.77935 3.24400 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97336 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 538974717 STATS LOCAL MSV -7.4755 0.72790 STATS LOCAL VITERBI -8.1493 0.72790 STATS LOCAL FORWARD -3.5738 0.72790 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24234 1.29073 1.49936 1.54671 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:11 2012 NSEQ 4 EFFN 3.246094 CKSUM 3448565070 STATS LOCAL MSV -8.1840 0.71933 STATS LOCAL VITERBI -7.6695 0.71933 STATS LOCAL FORWARD -4.1138 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27844 1.38903 1.45039 1.43662 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 * 1 3.40447 0.13368 3.45513 2.80810 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 2 3.06361 2.57923 3.11272 0.18276 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 3 3.06361 2.57923 3.11272 0.18276 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 4 3.40447 0.13368 3.45513 2.80810 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 5 2.93012 3.56249 0.11996 3.46456 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 6 0.14522 3.35543 2.78576 3.25475 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 7 3.40447 0.13368 3.45513 2.80810 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 8 3.40447 0.13368 3.45513 2.80810 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 9 3.06361 2.57923 3.11272 0.18276 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 10 2.93012 3.56249 0.11996 3.46456 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 11 0.14522 3.35543 2.78576 3.25475 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 12 2.93012 3.56249 0.11996 3.46456 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 13 0.14522 3.35543 2.78576 3.25475 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 14 3.06361 2.57923 3.11272 0.18276 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 15 3.40447 0.13368 3.45513 2.80810 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 16 2.93012 3.56249 0.11996 3.46456 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 17 2.93012 3.56249 0.11996 3.46456 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 18 0.14522 3.35543 2.78576 3.25475 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 19 3.40447 0.13368 3.45513 2.80810 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 20 2.93012 3.56249 0.11996 3.46456 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 21 0.14522 3.35543 2.78576 3.25475 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 22 2.93012 3.56249 0.11996 3.46456 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 23 0.14522 3.35543 2.78576 3.25475 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 24 3.06361 2.57923 3.11272 0.18276 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 25 3.06361 2.57923 3.11272 0.18276 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 26 0.14522 3.35543 2.78576 3.25475 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 27 3.40447 0.13368 3.45513 2.80810 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 28 3.40447 0.13368 3.45513 2.80810 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 29 3.40447 0.13368 3.45513 2.80810 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 30 2.93012 3.56249 0.11996 3.46456 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 31 3.40447 0.13368 3.45513 2.80810 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 32 3.06361 2.57923 3.11272 0.18276 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 33 2.93012 3.56249 0.11996 3.46456 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 34 0.14522 3.35543 2.78576 3.25475 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 35 0.14522 3.35543 2.78576 3.25475 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 36 3.06361 2.57923 3.11272 0.18276 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 37 3.06361 2.57923 3.11272 0.18276 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 38 3.06361 2.57923 3.11272 0.18276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 39 0.14522 3.35543 2.78576 3.25475 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 40 0.14522 3.35543 2.78576 3.25475 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 41 2.93012 3.56249 0.11996 3.46456 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 42 3.40447 0.13368 3.45513 2.80810 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 43 0.14522 3.35543 2.78576 3.25475 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 44 3.06361 2.57923 3.11272 0.18276 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 45 0.14522 3.35543 2.78576 3.25475 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97895 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivem_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:17 2012 NSEQ 4 EFFN 3.222656 CKSUM 1184312453 STATS LOCAL MSV -8.1699 0.71932 STATS LOCAL VITERBI -7.7304 0.71932 STATS LOCAL FORWARD -4.0256 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22397 1.20490 1.61149 1.57685 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * 1 3.39555 0.13478 3.44658 2.80157 1 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 2 3.05586 2.57429 3.10526 0.18405 2 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 3 3.39555 0.13478 3.44658 2.80157 3 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 4 3.39555 0.13478 3.44658 2.80157 4 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 5 2.92468 3.55461 0.12085 3.45586 5 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 6 0.14627 3.34770 2.78072 3.24630 6 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 7 3.39555 0.13478 3.44658 2.80157 7 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 8 3.39555 0.13478 3.44658 2.80157 8 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 9 3.05586 2.57429 3.10526 0.18405 9 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 10 3.39555 0.13478 3.44658 2.80157 10 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 11 0.14627 3.34770 2.78072 3.24630 11 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 12 2.92468 3.55461 0.12085 3.45586 12 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 13 0.14627 3.34770 2.78072 3.24630 13 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 14 3.05586 2.57429 3.10526 0.18405 14 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 15 3.39555 0.13478 3.44658 2.80157 15 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 16 0.14627 3.34770 2.78072 3.24630 16 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 17 2.92468 3.55461 0.12085 3.45586 17 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 18 0.14627 3.34770 2.78072 3.24630 18 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 19 3.39555 0.13478 3.44658 2.80157 19 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 20 2.92468 3.55461 0.12085 3.45586 20 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 21 0.14627 3.34770 2.78072 3.24630 21 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 22 2.92468 3.55461 0.12085 3.45586 22 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 23 0.14627 3.34770 2.78072 3.24630 23 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 24 3.39555 0.13478 3.44658 2.80157 24 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 25 3.05586 2.57429 3.10526 0.18405 25 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 26 0.14627 3.34770 2.78072 3.24630 26 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 27 3.39555 0.13478 3.44658 2.80157 27 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 28 3.39555 0.13478 3.44658 2.80157 28 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 29 3.39555 0.13478 3.44658 2.80157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 30 2.92468 3.55461 0.12085 3.45586 30 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 31 3.39555 0.13478 3.44658 2.80157 31 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 32 3.05586 2.57429 3.10526 0.18405 32 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 33 2.92468 3.55461 0.12085 3.45586 33 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 34 0.14627 3.34770 2.78072 3.24630 34 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 35 0.14627 3.34770 2.78072 3.24630 35 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 36 3.05586 2.57429 3.10526 0.18405 36 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 37 3.05586 2.57429 3.10526 0.18405 37 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 38 3.05586 2.57429 3.10526 0.18405 38 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 39 0.14627 3.34770 2.78072 3.24630 39 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 40 0.14627 3.34770 2.78072 3.24630 40 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 41 2.92468 3.55461 0.12085 3.45586 41 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 42 3.39555 0.13478 3.44658 2.80157 42 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 43 0.14627 3.34770 2.78072 3.24630 43 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 44 3.05586 2.57429 3.10526 0.18405 44 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 45 0.14627 3.34770 2.78072 3.24630 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97456 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:23 2012 NSEQ 4 EFFN 3.332031 CKSUM 2141380269 STATS LOCAL MSV -8.2750 0.71931 STATS LOCAL VITERBI -7.7801 0.71931 STATS LOCAL FORWARD -4.2110 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24934 1.32564 1.42131 1.57854 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 * 1 0.14150 3.38325 2.80387 3.28520 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 2 3.09163 2.59706 3.13967 0.17819 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 3 3.43655 0.12980 3.48587 2.83150 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 4 3.43655 0.12980 3.48587 2.83150 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 5 2.94961 3.59079 0.11683 3.49577 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 6 0.14150 3.38325 2.80387 3.28520 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 7 3.43655 0.12980 3.48587 2.83150 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 8 3.43655 0.12980 3.48587 2.83150 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 9 3.09163 2.59706 3.13967 0.17819 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 10 3.43655 0.12980 3.48587 2.83150 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 11 2.94961 3.59079 0.11683 3.49577 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 12 2.94961 3.59079 0.11683 3.49577 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 13 0.14150 3.38325 2.80387 3.28520 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 14 3.09163 2.59706 3.13967 0.17819 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 15 3.43655 0.12980 3.48587 2.83150 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 16 0.14150 3.38325 2.80387 3.28520 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 17 2.94961 3.59079 0.11683 3.49577 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 18 0.14150 3.38325 2.80387 3.28520 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 19 3.43655 0.12980 3.48587 2.83150 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 20 2.94961 3.59079 0.11683 3.49577 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 21 2.94961 3.59079 0.11683 3.49577 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 22 2.94961 3.59079 0.11683 3.49577 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 23 0.86115 2.51680 0.90816 2.37150 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 24 0.14150 3.38325 2.80387 3.28520 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 25 3.09163 2.59706 3.13967 0.17819 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 26 0.14150 3.38325 2.80387 3.28520 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 27 3.43655 0.12980 3.48587 2.83150 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 28 3.43655 0.12980 3.48587 2.83150 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 29 3.43655 0.12980 3.48587 2.83150 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 30 2.94961 3.59079 0.11683 3.49577 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 31 3.43655 0.12980 3.48587 2.83150 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 32 3.09163 2.59706 3.13967 0.17819 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 33 2.94961 3.59079 0.11683 3.49577 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 34 0.14150 3.38325 2.80387 3.28520 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 35 0.14150 3.38325 2.80387 3.28520 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 36 3.09163 2.59706 3.13967 0.17819 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 37 3.09163 2.59706 3.13967 0.17819 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 38 3.09163 2.59706 3.13967 0.17819 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 39 0.14150 3.38325 2.80387 3.28520 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 40 0.14150 3.38325 2.80387 3.28520 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 41 2.94961 3.59079 0.11683 3.49577 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 42 3.43655 0.12980 3.48587 2.83150 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 43 0.14150 3.38325 2.80387 3.28520 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 44 3.09163 2.59706 3.13967 0.17819 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 45 0.14150 3.38325 2.80387 3.28520 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99490 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:15:18 2012 NSEQ 8 EFFN 3.582031 CKSUM 195965753 STATS LOCAL MSV -7.5858 0.71932 STATS LOCAL VITERBI -7.6704 0.71932 STATS LOCAL FORWARD -4.2797 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26432 1.21145 1.50325 1.62255 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 0.00000 * 1 0.69498 1.31322 2.20579 2.10538 1 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 2 3.16964 2.64659 3.21467 0.16615 2 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 3 3.52452 0.11982 3.57001 2.89508 3 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 4 3.52452 0.11982 3.57001 2.89508 4 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 5 3.00224 3.66784 0.10876 3.58097 5 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 6 0.13183 3.45981 2.85336 3.36912 6 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 7 3.52452 0.11982 3.57001 2.89508 7 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 8 3.52452 0.11982 3.57001 2.89508 8 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 9 3.16964 2.64659 3.21467 0.16615 9 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 10 3.52452 0.11982 3.57001 2.89508 10 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 11 3.00224 3.66784 0.10876 3.58097 11 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 12 3.00224 3.66784 0.10876 3.58097 12 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 13 0.13183 3.45981 2.85336 3.36912 13 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 14 3.16964 2.64659 3.21467 0.16615 14 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 15 3.52452 0.11982 3.57001 2.89508 15 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 16 0.13183 3.45981 2.85336 3.36912 16 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 17 3.00224 3.66784 0.10876 3.58097 17 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 18 0.13183 3.45981 2.85336 3.36912 18 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 19 3.52452 0.11982 3.57001 2.89508 19 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 20 3.00224 3.66784 0.10876 3.58097 20 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 21 0.57857 2.62890 1.25834 2.48868 21 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 22 3.00224 3.66784 0.10876 3.58097 22 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 23 0.13183 3.45981 2.85336 3.36912 23 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 24 3.52452 0.11982 3.57001 2.89508 24 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 25 3.16964 2.64659 3.21467 0.16615 25 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 26 0.13183 3.45981 2.85336 3.36912 26 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 27 3.52452 0.11982 3.57001 2.89508 27 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 28 3.52452 0.11982 3.57001 2.89508 28 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 29 3.52452 0.11982 3.57001 2.89508 29 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 30 3.00224 3.66784 0.10876 3.58097 30 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 31 3.52452 0.11982 3.57001 2.89508 31 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 32 3.16964 2.64659 3.21467 0.16615 32 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 33 3.00224 3.66784 0.10876 3.58097 33 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 34 0.13183 3.45981 2.85336 3.36912 34 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 35 0.13183 3.45981 2.85336 3.36912 35 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 36 2.49878 0.67370 2.57055 1.10411 36 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 37 3.16964 2.64659 3.21467 0.16615 37 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 38 3.16964 2.64659 3.21467 0.16615 38 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 39 0.13183 3.45981 2.85336 3.36912 39 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 40 0.13183 3.45981 2.85336 3.36912 40 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 41 3.00224 3.66784 0.10876 3.58097 41 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 42 3.52452 0.11982 3.57001 2.89508 42 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 43 0.13183 3.45981 2.85336 3.36912 43 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 44 3.16964 2.64659 3.21467 0.16615 44 - - 1.38629 1.38629 1.38629 1.38629 0.03520 4.05734 4.05734 1.46634 0.26236 1.09861 0.40547 45 0.13183 3.45981 2.85336 3.36912 45 - - 1.38629 1.38629 1.38629 1.38629 0.01776 4.03989 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivep_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:36 2012 NSEQ 17 EFFN 3.365967 CKSUM 4287925610 STATS LOCAL MSV -8.2565 0.71932 STATS LOCAL VITERBI -7.6487 0.71932 STATS LOCAL FORWARD -4.1993 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26446 1.28628 1.52443 1.49806 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 0.00000 * 1 1.43388 0.63032 2.28387 2.06115 1 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 2 3.10252 2.60398 3.15014 0.17645 2 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 3 3.44896 0.12833 3.49774 2.84052 3 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 4 3.44896 0.12833 3.49774 2.84052 4 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 5 2.95710 3.60170 0.11565 3.50782 5 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 6 0.14009 3.39402 2.81085 3.29699 6 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 7 3.44896 0.12833 3.49774 2.84052 7 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 8 3.44896 0.12833 3.49774 2.84052 8 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 9 3.10252 2.60398 3.15014 0.17645 9 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 10 3.44896 0.12833 3.49774 2.84052 10 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 11 0.14009 3.39402 2.81085 3.29699 11 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 12 2.95710 3.60170 0.11565 3.50782 12 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 13 0.14009 3.39402 2.81085 3.29699 13 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 14 3.10252 2.60398 3.15014 0.17645 14 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 15 3.44896 0.12833 3.49774 2.84052 15 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 16 2.95710 3.60170 0.11565 3.50782 16 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 17 2.95710 3.60170 0.11565 3.50782 17 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 18 0.14009 3.39402 2.81085 3.29699 18 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 19 3.44896 0.12833 3.49774 2.84052 19 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 20 2.95710 3.60170 0.11565 3.50782 20 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 21 0.14009 3.39402 2.81085 3.29699 21 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 22 2.95710 3.60170 0.11565 3.50782 22 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 23 0.14009 3.39402 2.81085 3.29699 23 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 24 3.10252 2.60398 3.15014 0.17645 24 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 25 3.10252 2.60398 3.15014 0.17645 25 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 26 0.14009 3.39402 2.81085 3.29699 26 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 27 3.44896 0.12833 3.49774 2.84052 27 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 28 3.44896 0.12833 3.49774 2.84052 28 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 29 3.44896 0.12833 3.49774 2.84052 29 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 30 2.95710 3.60170 0.11565 3.50782 30 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 31 3.44896 0.12833 3.49774 2.84052 31 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 32 3.10252 2.60398 3.15014 0.17645 32 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 33 2.95710 3.60170 0.11565 3.50782 33 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 34 0.14009 3.39402 2.81085 3.29699 34 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 35 0.14009 3.39402 2.81085 3.29699 35 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 36 3.10252 2.60398 3.15014 0.17645 36 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 37 3.10252 2.60398 3.15014 0.17645 37 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 38 3.10252 2.60398 3.15014 0.17645 38 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 39 0.14009 3.39402 2.81085 3.29699 39 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 40 0.14009 3.39402 2.81085 3.29699 40 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 41 2.95710 3.60170 0.11565 3.50782 41 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 42 3.44896 0.12833 3.49774 2.84052 42 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 43 0.14009 3.39402 2.81085 3.29699 43 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 44 3.10252 2.60398 3.15014 0.17645 44 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01926 4.01926 1.46634 0.26236 1.09861 0.40547 45 0.14009 3.39402 2.81085 3.29699 45 - - 1.38629 1.38629 1.38629 1.38629 0.01846 4.00113 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:43 2012 NSEQ 4 EFFN 3.808594 CKSUM 1514537771 STATS LOCAL MSV -7.0892 0.71932 STATS LOCAL VITERBI -7.6193 0.71932 STATS LOCAL FORWARD -3.9103 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.37675 1.44057 1.24790 1.49744 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 0.00000 * 1 3.23608 2.68870 3.27851 0.15662 1 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 2 2.12257 0.97963 0.98185 2.03861 2 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 3 3.23608 2.68870 3.27851 0.15662 3 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 4 3.04531 3.73144 0.10258 3.65148 4 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 5 3.04531 3.73144 0.10258 3.65148 5 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 6 3.04531 3.73144 0.10258 3.65148 6 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 7 3.59776 0.11218 3.63995 2.94742 7 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 8 3.59776 0.11218 3.63995 2.94742 8 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 9 3.23608 2.68870 3.27851 0.15662 9 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 10 3.59776 0.11218 3.63995 2.94742 10 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 11 0.12430 3.52395 2.89458 3.43954 11 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 12 3.04531 3.73144 0.10258 3.65148 12 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 13 3.04531 3.73144 0.10258 3.65148 13 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 14 3.23608 2.68870 3.27851 0.15662 14 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 15 3.59776 0.11218 3.63995 2.94742 15 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 16 0.12430 3.52395 2.89458 3.43954 16 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 17 3.04531 3.73144 0.10258 3.65148 17 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 18 0.37490 2.86983 1.65322 2.74111 18 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 19 2.70582 1.56363 2.76927 0.41385 19 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 20 3.04531 3.73144 0.10258 3.65148 20 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 21 0.12430 3.52395 2.89458 3.43954 21 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 22 3.04531 3.73144 0.10258 3.65148 22 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 23 0.81347 2.59501 0.92651 2.45219 23 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 24 3.59776 0.11218 3.63995 2.94742 24 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 25 3.04531 3.73144 0.10258 3.65148 25 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 26 0.12430 3.52395 2.89458 3.43954 26 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 27 3.59776 0.11218 3.63995 2.94742 27 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 28 3.59776 0.11218 3.63995 2.94742 28 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 29 3.59776 0.11218 3.63995 2.94742 29 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 30 3.04531 3.73144 0.10258 3.65148 30 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 31 2.75233 0.41169 2.82025 1.54131 31 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 32 3.23608 2.68870 3.27851 0.15662 32 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 33 3.04531 3.73144 0.10258 3.65148 33 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 34 0.12430 3.52395 2.89458 3.43954 34 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 35 0.12430 3.52395 2.89458 3.43954 35 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 36 3.23608 2.68870 3.27851 0.15662 36 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 37 3.23608 2.68870 3.27851 0.15662 37 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 38 3.23608 2.68870 3.27851 0.15662 38 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 39 0.12430 3.52395 2.89458 3.43954 39 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 40 0.12430 3.52395 2.89458 3.43954 40 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 41 3.04531 3.73144 0.10258 3.65148 41 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 42 3.59776 0.11218 3.63995 2.94742 42 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 43 0.12430 3.52395 2.89458 3.43954 43 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 44 3.23608 2.68870 3.27851 0.15662 44 - - 1.38629 1.38629 1.38629 1.38629 0.03385 4.09578 4.09578 1.46634 0.26236 1.09861 0.40547 45 0.12430 3.52395 2.89458 3.43954 45 - - 1.38629 1.38629 1.38629 1.38629 0.01707 4.07899 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiver_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:51 2012 NSEQ 30 EFFN 3.277588 CKSUM 2425933469 STATS LOCAL MSV -8.2755 0.71933 STATS LOCAL VITERBI -7.7804 0.71933 STATS LOCAL FORWARD -4.0974 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20618 1.26770 1.40145 1.75480 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 0.00000 * 1 1.36735 2.65257 0.52169 2.51047 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 2 3.41634 0.13223 3.46651 2.81677 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 3 2.93735 3.57297 0.11879 3.47612 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 4 3.41634 0.13223 3.46651 2.81677 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 5 2.93735 3.57297 0.11879 3.47612 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 6 0.14383 3.36572 2.79247 3.26601 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 7 3.41634 0.13223 3.46651 2.81677 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 8 3.41634 0.13223 3.46651 2.81677 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 9 3.07395 2.58581 3.12266 0.18106 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 10 3.41634 0.13223 3.46651 2.81677 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 11 0.14383 3.36572 2.79247 3.26601 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 12 2.93735 3.57297 0.11879 3.47612 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 13 0.14383 3.36572 2.79247 3.26601 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 14 3.07395 2.58581 3.12266 0.18106 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 15 3.41634 0.13223 3.46651 2.81677 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 16 0.14383 3.36572 2.79247 3.26601 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 17 2.93735 3.57297 0.11879 3.47612 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 18 0.14383 3.36572 2.79247 3.26601 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 19 3.41634 0.13223 3.46651 2.81677 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 20 2.93735 3.57297 0.11879 3.47612 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 21 0.14383 3.36572 2.79247 3.26601 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 22 2.93735 3.57297 0.11879 3.47612 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 23 0.14383 3.36572 2.79247 3.26601 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 24 3.41634 0.13223 3.46651 2.81677 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 25 2.93735 3.57297 0.11879 3.47612 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 26 0.14383 3.36572 2.79247 3.26601 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 27 3.41634 0.13223 3.46651 2.81677 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 28 3.41634 0.13223 3.46651 2.81677 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 29 3.41634 0.13223 3.46651 2.81677 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 30 2.93735 3.57297 0.11879 3.47612 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 31 3.41634 0.13223 3.46651 2.81677 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 32 3.07395 2.58581 3.12266 0.18106 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 33 2.93735 3.57297 0.11879 3.47612 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 34 0.14383 3.36572 2.79247 3.26601 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 35 0.14383 3.36572 2.79247 3.26601 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 36 2.96771 2.33468 3.02010 0.21947 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 37 3.07395 2.58581 3.12266 0.18106 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 38 3.07395 2.58581 3.12266 0.18106 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 39 0.14383 3.36572 2.79247 3.26601 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 40 0.14383 3.36572 2.79247 3.26601 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 41 2.93735 3.57297 0.11879 3.47612 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 42 3.41634 0.13223 3.46651 2.81677 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 43 0.14383 3.36572 2.79247 3.26601 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 44 3.07395 2.58581 3.12266 0.18106 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00325 4.00325 1.46634 0.26236 1.09861 0.40547 45 0.14383 3.36572 2.79247 3.26601 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98483 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fives_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:53:57 2012 NSEQ 4 EFFN 3.285156 CKSUM 1153157283 STATS LOCAL MSV -8.1433 0.71932 STATS LOCAL VITERBI -7.6563 0.71932 STATS LOCAL FORWARD -3.9177 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21903 1.45908 1.52472 1.36903 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 * 1 3.07642 2.58739 3.12504 0.18065 1 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 2 3.07642 2.58739 3.12504 0.18065 2 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 3 3.07642 2.58739 3.12504 0.18065 3 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 4 3.41917 0.13188 3.46922 2.81884 4 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 5 2.93908 3.57547 0.11851 3.47887 5 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 6 0.14350 3.36817 2.79406 3.26870 6 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 7 3.41917 0.13188 3.46922 2.81884 7 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 8 3.41917 0.13188 3.46922 2.81884 8 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 9 3.07642 2.58739 3.12504 0.18065 9 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 10 2.93908 3.57547 0.11851 3.47887 10 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 11 0.14350 3.36817 2.79406 3.26870 11 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 12 2.93908 3.57547 0.11851 3.47887 12 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 13 0.14350 3.36817 2.79406 3.26870 13 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 14 3.07642 2.58739 3.12504 0.18065 14 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 15 3.07642 2.58739 3.12504 0.18065 15 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 16 0.14350 3.36817 2.79406 3.26870 16 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 17 2.93908 3.57547 0.11851 3.47887 17 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 18 2.93908 3.57547 0.11851 3.47887 18 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 19 3.41917 0.13188 3.46922 2.81884 19 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 20 0.14350 3.36817 2.79406 3.26870 20 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 21 0.14350 3.36817 2.79406 3.26870 21 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 22 2.93908 3.57547 0.11851 3.47887 22 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 23 0.14350 3.36817 2.79406 3.26870 23 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 24 3.07642 2.58739 3.12504 0.18065 24 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 25 3.07642 2.58739 3.12504 0.18065 25 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 26 0.14350 3.36817 2.79406 3.26870 26 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 27 3.41917 0.13188 3.46922 2.81884 27 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 28 3.41917 0.13188 3.46922 2.81884 28 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 29 3.41917 0.13188 3.46922 2.81884 29 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 30 2.93908 3.57547 0.11851 3.47887 30 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 31 3.41917 0.13188 3.46922 2.81884 31 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 32 3.41917 0.13188 3.46922 2.81884 32 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 33 2.93908 3.57547 0.11851 3.47887 33 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 34 0.14350 3.36817 2.79406 3.26870 34 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 35 0.14350 3.36817 2.79406 3.26870 35 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 36 3.07642 2.58739 3.12504 0.18065 36 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 37 3.07642 2.58739 3.12504 0.18065 37 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 38 3.07642 2.58739 3.12504 0.18065 38 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 39 0.14350 3.36817 2.79406 3.26870 39 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 40 0.14350 3.36817 2.79406 3.26870 40 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 41 2.93908 3.57547 0.11851 3.47887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 42 3.41917 0.13188 3.46922 2.81884 42 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 43 0.14350 3.36817 2.79406 3.26870 43 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 44 3.07642 2.58739 3.12504 0.18065 44 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 45 0.14350 3.36817 2.79406 3.26870 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivet_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:02 2012 NSEQ 9 EFFN 3.405762 CKSUM 1998620783 STATS LOCAL MSV -7.7501 0.71933 STATS LOCAL VITERBI -7.5664 0.71933 STATS LOCAL FORWARD -4.1179 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26772 1.30941 1.54598 1.44628 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 0.00000 * 1 3.46331 0.12666 3.51148 2.85093 1 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 2 3.11517 2.61202 3.16230 0.17445 2 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 3 2.64758 1.62824 2.71176 0.40574 3 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 4 2.96574 3.61431 0.11430 3.52175 4 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 5 0.13848 3.40650 2.81894 3.31066 5 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 6 3.46331 0.12666 3.51148 2.85093 6 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 7 3.46331 0.12666 3.51148 2.85093 7 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 8 3.11517 2.61202 3.16230 0.17445 8 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 9 3.46331 0.12666 3.51148 2.85093 9 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 10 0.13848 3.40650 2.81894 3.31066 10 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 11 2.96574 3.61431 0.11430 3.52175 11 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 12 0.13848 3.40650 2.81894 3.31066 12 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 13 3.11517 2.61202 3.16230 0.17445 13 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 14 3.46331 0.12666 3.51148 2.85093 14 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 15 0.13848 3.40650 2.81894 3.31066 15 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 16 2.96574 3.61431 0.11430 3.52175 16 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 17 2.96574 3.61431 0.11430 3.52175 17 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 18 3.46331 0.12666 3.51148 2.85093 18 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 19 0.13848 3.40650 2.81894 3.31066 19 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 20 0.13848 3.40650 2.81894 3.31066 20 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 21 2.96574 3.61431 0.11430 3.52175 21 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 22 1.74479 2.89395 0.34711 2.76092 22 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 23 3.46331 0.12666 3.51148 2.85093 23 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 24 3.11517 2.61202 3.16230 0.17445 24 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 25 0.13848 3.40650 2.81894 3.31066 25 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 26 3.46331 0.12666 3.51148 2.85093 26 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 27 3.46331 0.12666 3.51148 2.85093 27 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 28 3.46331 0.12666 3.51148 2.85093 28 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 29 2.96574 3.61431 0.11430 3.52175 29 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 30 3.46331 0.12666 3.51148 2.85093 30 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 31 3.11517 2.61202 3.16230 0.17445 31 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 32 2.96574 3.61431 0.11430 3.52175 32 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 33 0.13848 3.40650 2.81894 3.31066 33 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 34 0.13848 3.40650 2.81894 3.31066 34 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 35 3.11517 2.61202 3.16230 0.17445 35 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 36 3.11517 2.61202 3.16230 0.17445 36 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 37 3.11517 2.61202 3.16230 0.17445 37 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 38 0.13848 3.40650 2.81894 3.31066 38 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 39 0.13848 3.40650 2.81894 3.31066 39 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 40 2.96574 3.61431 0.11430 3.52175 40 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 41 3.46331 0.12666 3.51148 2.85093 41 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 42 0.13848 3.40650 2.81894 3.31066 42 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 43 3.11517 2.61202 3.16230 0.17445 43 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 44 0.13848 3.40650 2.81894 3.31066 44 - - 1.38629 1.38629 1.38629 1.38629 0.03633 4.02638 4.02638 1.46634 0.26236 1.09861 0.40547 45 3.11517 2.61202 3.16230 0.17445 45 - - 1.38629 1.38629 1.38629 1.38629 0.01833 4.00838 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fiveu_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:08 2012 NSEQ 3 EFFN 3.000000 CKSUM 1112863540 STATS LOCAL MSV -7.9703 0.72001 STATS LOCAL VITERBI -7.7320 0.72001 STATS LOCAL FORWARD -3.8267 0.72001 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16711 1.27728 1.44572 1.74661 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fivev_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:14 2012 NSEQ 3 EFFN 3.000000 CKSUM 2351947980 STATS LOCAL MSV -8.2579 0.72001 STATS LOCAL VITERBI -7.8277 0.72001 STATS LOCAL FORWARD -4.0042 0.72001 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16841 1.27582 1.44578 1.74654 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_forty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:27 2012 NSEQ 3 EFFN 3.000000 CKSUM 177781798 STATS LOCAL MSV -7.9280 0.72034 STATS LOCAL VITERBI -7.6927 0.72034 STATS LOCAL FORWARD -3.8615 0.72034 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16587 1.24219 1.44401 1.81022 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.43223 0.62271 2.50508 1.22417 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:23 2012 NSEQ 2 EFFN 2.000000 CKSUM 3833065457 STATS LOCAL MSV -7.5228 0.72841 STATS LOCAL VITERBI -8.1928 0.72841 STATS LOCAL FORWARD -3.5857 0.72841 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26812 1.40241 1.36693 1.52443 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 1.03732 1.95876 1.96551 1.00928 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:38:52 2012 NSEQ 3 EFFN 3.000000 CKSUM 1191930638 STATS LOCAL MSV -8.2239 0.72118 STATS LOCAL VITERBI -7.7053 0.72118 STATS LOCAL FORWARD -4.0150 0.72118 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13466 1.28437 1.57340 1.63832 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.11048 0.71234 1.38751 1.97595 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.66361 1.42357 2.15007 2.05820 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyfoura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:38:28 2012 NSEQ 5 EFFN 3.413086 CKSUM 1013805944 STATS LOCAL MSV -7.6463 0.71933 STATS LOCAL VITERBI -7.8316 0.71933 STATS LOCAL FORWARD -4.0407 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28408 1.29592 1.36697 1.63695 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 0.00000 * 1 0.34579 2.85483 1.77608 2.72608 1 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 2 2.73556 0.38295 2.80366 1.64658 2 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 3 2.96731 3.61661 0.11405 3.52429 3 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 4 3.46593 0.12636 3.51399 2.85283 4 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 5 2.96731 3.61661 0.11405 3.52429 5 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 6 0.13819 3.40877 2.82041 3.31315 6 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 7 3.46593 0.12636 3.51399 2.85283 7 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 8 3.46593 0.12636 3.51399 2.85283 8 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 9 3.11748 2.61349 3.16453 0.17409 9 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 10 3.46593 0.12636 3.51399 2.85283 10 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 11 0.13819 3.40877 2.82041 3.31315 11 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 12 2.96731 3.61661 0.11405 3.52429 12 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 13 0.13819 3.40877 2.82041 3.31315 13 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 14 3.11748 2.61349 3.16453 0.17409 14 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 15 3.46593 0.12636 3.51399 2.85283 15 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 16 0.13819 3.40877 2.82041 3.31315 16 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 17 2.96731 3.61661 0.11405 3.52429 17 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 18 0.13819 3.40877 2.82041 3.31315 18 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 19 3.46593 0.12636 3.51399 2.85283 19 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 20 2.96731 3.61661 0.11405 3.52429 20 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 21 3.11748 2.61349 3.16453 0.17409 21 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 22 2.96731 3.61661 0.11405 3.52429 22 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 23 2.96731 3.61661 0.11405 3.52429 23 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 24 2.73556 0.38295 2.80366 1.64658 24 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 25 2.96731 3.61661 0.11405 3.52429 25 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 26 0.13819 3.40877 2.82041 3.31315 26 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 27 3.46593 0.12636 3.51399 2.85283 27 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 28 3.46593 0.12636 3.51399 2.85283 28 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 29 3.46593 0.12636 3.51399 2.85283 29 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 30 2.96731 3.61661 0.11405 3.52429 30 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 31 3.46593 0.12636 3.51399 2.85283 31 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 32 3.11748 2.61349 3.16453 0.17409 32 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 33 2.96731 3.61661 0.11405 3.52429 33 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 34 0.13819 3.40877 2.82041 3.31315 34 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 35 0.13819 3.40877 2.82041 3.31315 35 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 36 3.11748 2.61349 3.16453 0.17409 36 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 37 3.11748 2.61349 3.16453 0.17409 37 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 38 3.11748 2.61349 3.16453 0.17409 38 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 39 0.13819 3.40877 2.82041 3.31315 39 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 40 0.13819 3.40877 2.82041 3.31315 40 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 41 2.96731 3.61661 0.11405 3.52429 41 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 42 3.46593 0.12636 3.51399 2.85283 42 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 43 0.13819 3.40877 2.82041 3.31315 43 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 44 3.11748 2.61349 3.16453 0.17409 44 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02769 4.02769 1.46634 0.26236 1.09861 0.40547 45 0.13819 3.40877 2.82041 3.31315 45 - - 1.38629 1.38629 1.38629 1.38629 0.01831 4.00971 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyfourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:38:39 2012 NSEQ 2 EFFN 2.000000 CKSUM 1268375051 STATS LOCAL MSV -7.6474 0.72924 STATS LOCAL VITERBI -8.4367 0.72924 STATS LOCAL FORWARD -3.2953 0.72924 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.30102 1.30681 1.42415 1.53087 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 1.01448 1.11006 1.95471 1.79419 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 1.01448 1.11006 1.95471 1.79419 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:33 2012 NSEQ 4 EFFN 3.339844 CKSUM 2409178545 STATS LOCAL MSV -8.1050 0.71932 STATS LOCAL VITERBI -7.6212 0.71932 STATS LOCAL FORWARD -4.1599 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.25227 1.39140 1.37276 1.55112 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 * 1 0.97435 2.14484 2.16029 0.94114 1 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 2 3.09414 2.59866 3.14209 0.17779 2 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 3 2.95135 3.59331 0.11655 3.49856 3 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 4 3.43942 0.12946 3.48861 2.83359 4 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 5 2.95135 3.59331 0.11655 3.49856 5 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 6 0.14117 3.38574 2.80548 3.28793 6 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 7 3.43942 0.12946 3.48861 2.83359 7 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 8 3.43942 0.12946 3.48861 2.83359 8 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 9 3.09414 2.59866 3.14209 0.17779 9 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 10 3.43942 0.12946 3.48861 2.83359 10 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 11 0.14117 3.38574 2.80548 3.28793 11 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 12 2.95135 3.59331 0.11655 3.49856 12 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 13 0.14117 3.38574 2.80548 3.28793 13 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 14 2.95135 3.59331 0.11655 3.49856 14 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 15 3.43942 0.12946 3.48861 2.83359 15 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 16 0.14117 3.38574 2.80548 3.28793 16 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 17 2.95135 3.59331 0.11655 3.49856 17 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 18 2.95135 3.59331 0.11655 3.49856 18 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 19 3.09414 2.59866 3.14209 0.17779 19 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 20 2.95135 3.59331 0.11655 3.49856 20 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 21 0.14117 3.38574 2.80548 3.28793 21 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 22 2.95135 3.59331 0.11655 3.49856 22 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 23 0.14117 3.38574 2.80548 3.28793 23 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 24 3.43942 0.12946 3.48861 2.83359 24 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 25 3.09414 2.59866 3.14209 0.17779 25 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 26 0.14117 3.38574 2.80548 3.28793 26 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 27 3.43942 0.12946 3.48861 2.83359 27 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 28 3.43942 0.12946 3.48861 2.83359 28 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 29 3.43942 0.12946 3.48861 2.83359 29 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 30 2.95135 3.59331 0.11655 3.49856 30 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 31 3.43942 0.12946 3.48861 2.83359 31 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 32 3.09414 2.59866 3.14209 0.17779 32 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 33 2.95135 3.59331 0.11655 3.49856 33 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 34 0.14117 3.38574 2.80548 3.28793 34 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 35 0.14117 3.38574 2.80548 3.28793 35 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 36 3.09414 2.59866 3.14209 0.17779 36 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 37 3.09414 2.59866 3.14209 0.17779 37 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 38 3.09414 2.59866 3.14209 0.17779 38 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 39 0.14117 3.38574 2.80548 3.28793 39 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 40 0.14117 3.38574 2.80548 3.28793 40 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 41 2.95135 3.59331 0.11655 3.49856 41 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 42 3.43942 0.12946 3.48861 2.83359 42 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 43 0.14117 3.38574 2.80548 3.28793 43 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 44 3.09414 2.59866 3.14209 0.17779 44 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 45 0.14117 3.38574 2.80548 3.28793 45 - - 1.38629 1.38629 1.38629 1.38629 0.01855 3.99634 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:39 2012 NSEQ 3 EFFN 3.000000 CKSUM 3366742742 STATS LOCAL MSV -8.0336 0.72055 STATS LOCAL VITERBI -7.7232 0.72055 STATS LOCAL FORWARD -4.1900 0.72055 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.30370 1.20720 1.50925 1.56846 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.54133 2.56226 1.37841 2.42004 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:44 2012 NSEQ 3 EFFN 3.000000 CKSUM 929202663 STATS LOCAL MSV -8.0030 0.72088 STATS LOCAL VITERBI -7.9152 0.72088 STATS LOCAL FORWARD -4.0145 0.72088 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27679 1.32055 1.55992 1.41088 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.10082 2.21882 0.69930 1.30206 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:13 2012 NSEQ 4 EFFN 3.386719 CKSUM 506096181 STATS LOCAL MSV -7.4774 0.71932 STATS LOCAL VITERBI -7.6569 0.71932 STATS LOCAL FORWARD -4.1355 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27567 1.14533 1.52677 1.68524 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 * 1 2.64800 0.44394 2.71770 1.50655 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 2 3.10913 2.60819 3.15650 0.17540 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 3 3.45647 0.12746 3.50493 2.84597 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 4 3.45647 0.12746 3.50493 2.84597 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 5 2.96162 3.60830 0.11494 3.51511 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 6 0.13925 3.40055 2.81508 3.30414 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 7 3.45647 0.12746 3.50493 2.84597 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 8 3.45647 0.12746 3.50493 2.84597 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 9 3.10913 2.60819 3.15650 0.17540 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 10 3.45647 0.12746 3.50493 2.84597 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 11 2.96162 3.60830 0.11494 3.51511 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 12 2.96162 3.60830 0.11494 3.51511 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 13 0.13925 3.40055 2.81508 3.30414 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 14 3.10913 2.60819 3.15650 0.17540 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 15 3.45647 0.12746 3.50493 2.84597 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 16 0.13925 3.40055 2.81508 3.30414 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 17 2.96162 3.60830 0.11494 3.51511 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 18 0.13925 3.40055 2.81508 3.30414 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 19 3.45647 0.12746 3.50493 2.84597 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 20 2.96162 3.60830 0.11494 3.51511 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 21 0.13925 3.40055 2.81508 3.30414 21 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 22 2.96162 3.60830 0.11494 3.51511 22 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 23 0.13925 3.40055 2.81508 3.30414 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 24 3.45647 0.12746 3.50493 2.84597 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 25 3.10913 2.60819 3.15650 0.17540 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 26 0.13925 3.40055 2.81508 3.30414 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 27 3.45647 0.12746 3.50493 2.84597 27 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 28 3.45647 0.12746 3.50493 2.84597 28 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 29 3.45647 0.12746 3.50493 2.84597 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 30 2.96162 3.60830 0.11494 3.51511 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 31 3.45647 0.12746 3.50493 2.84597 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 32 2.41720 0.96408 2.48911 0.80629 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 33 2.96162 3.60830 0.11494 3.51511 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 34 0.13925 3.40055 2.81508 3.30414 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 35 0.13925 3.40055 2.81508 3.30414 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 36 3.45647 0.12746 3.50493 2.84597 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 37 3.10913 2.60819 3.15650 0.17540 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 38 3.10913 2.60819 3.15650 0.17540 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 39 0.13925 3.40055 2.81508 3.30414 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 40 0.13925 3.40055 2.81508 3.30414 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 41 2.96162 3.60830 0.11494 3.51511 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 42 3.45647 0.12746 3.50493 2.84597 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 43 0.13925 3.40055 2.81508 3.30414 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 44 3.10913 2.60819 3.15650 0.17540 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 45 0.13925 3.40055 2.81508 3.30414 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00492 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:39:02 2012 NSEQ 5 EFFN 3.520508 CKSUM 110130574 STATS LOCAL MSV -7.5423 0.71933 STATS LOCAL VITERBI -7.7453 0.71933 STATS LOCAL FORWARD -4.2471 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26520 1.20006 1.54145 1.59667 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 0.00000 * 1 2.47058 0.72118 2.54263 1.04803 1 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 2 3.15091 2.63471 3.19667 0.16895 2 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 3 3.50359 0.12211 3.55001 2.88003 3 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 4 3.50359 0.12211 3.55001 2.88003 4 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 5 2.98981 3.64957 0.11061 3.56075 5 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 6 0.13406 3.44156 2.84159 3.34909 6 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 7 3.50359 0.12211 3.55001 2.88003 7 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 8 3.50359 0.12211 3.55001 2.88003 8 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 9 3.15091 2.63471 3.19667 0.16895 9 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 10 3.50359 0.12211 3.55001 2.88003 10 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 11 1.86609 2.99735 0.30300 2.86904 11 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 12 2.98981 3.64957 0.11061 3.56075 12 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 13 0.13406 3.44156 2.84159 3.34909 13 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 14 3.15091 2.63471 3.19667 0.16895 14 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 15 3.50359 0.12211 3.55001 2.88003 15 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 16 0.13406 3.44156 2.84159 3.34909 16 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 17 2.98981 3.64957 0.11061 3.56075 17 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 18 0.13406 3.44156 2.84159 3.34909 18 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 19 3.50359 0.12211 3.55001 2.88003 19 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 20 2.98981 3.64957 0.11061 3.56075 20 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 21 0.13406 3.44156 2.84159 3.34909 21 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 22 2.98981 3.64957 0.11061 3.56075 22 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 23 0.13406 3.44156 2.84159 3.34909 23 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 24 3.50359 0.12211 3.55001 2.88003 24 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 25 3.15091 2.63471 3.19667 0.16895 25 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 26 0.13406 3.44156 2.84159 3.34909 26 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 27 3.50359 0.12211 3.55001 2.88003 27 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 28 3.50359 0.12211 3.55001 2.88003 28 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 29 3.50359 0.12211 3.55001 2.88003 29 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 30 2.98981 3.64957 0.11061 3.56075 30 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 31 3.50359 0.12211 3.55001 2.88003 31 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 32 3.15091 2.63471 3.19667 0.16895 32 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 33 2.98981 3.64957 0.11061 3.56075 33 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 34 0.13406 3.44156 2.84159 3.34909 34 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 35 0.13406 3.44156 2.84159 3.34909 35 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 36 2.46474 0.73956 2.53682 1.02575 36 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 37 3.15091 2.63471 3.19667 0.16895 37 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 38 3.15091 2.63471 3.19667 0.16895 38 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 39 0.13406 3.44156 2.84159 3.34909 39 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 40 0.13406 3.44156 2.84159 3.34909 40 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 41 2.98981 3.64957 0.11061 3.56075 41 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 42 3.50359 0.12211 3.55001 2.88003 42 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 43 0.13406 3.44156 2.84159 3.34909 43 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 44 3.15091 2.63471 3.19667 0.16895 44 - - 1.38629 1.38629 1.38629 1.38629 0.03559 4.04664 4.04664 1.46634 0.26236 1.09861 0.40547 45 0.13406 3.44156 2.84159 3.34909 45 - - 1.38629 1.38629 1.38629 1.38629 0.01795 4.02901 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortythreea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:38:10 2012 NSEQ 2 EFFN 2.000000 CKSUM 3285087360 STATS LOCAL MSV -7.4672 0.72897 STATS LOCAL VITERBI -8.3344 0.72897 STATS LOCAL FORWARD -3.4614 0.72897 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26742 1.43435 1.48777 1.36926 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 1.01448 1.11006 1.95471 1.79419 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortythreeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:38:18 2012 NSEQ 3 EFFN 3.000000 CKSUM 1330444769 STATS LOCAL MSV -8.1653 0.72121 STATS LOCAL VITERBI -7.7606 0.72121 STATS LOCAL FORWARD -3.9063 0.72121 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24373 1.24730 1.57852 1.52265 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.66361 1.42357 2.15007 2.05820 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.12334 2.11792 1.37287 0.67982 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fortytwoa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:57 2012 NSEQ 3 EFFN 3.000000 CKSUM 2178489850 STATS LOCAL MSV -8.1532 0.72099 STATS LOCAL VITERBI -7.7294 0.72099 STATS LOCAL FORWARD -3.9694 0.72099 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20847 1.23061 1.78114 1.42385 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 1.32295 0.73131 2.17864 1.97201 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:49:53 2012 NSEQ 15 EFFN 3.504639 CKSUM 2507778126 STATS LOCAL MSV -7.5617 0.71933 STATS LOCAL VITERBI -7.7985 0.71933 STATS LOCAL FORWARD -4.1327 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24885 1.29821 1.59403 1.43953 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 0.00000 * 1 3.14603 2.63161 3.19198 0.16969 1 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 2 3.14603 2.63161 3.19198 0.16969 2 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 3 3.14603 2.63161 3.19198 0.16969 3 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 4 3.49812 0.12271 3.54478 2.87609 4 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 5 2.98656 3.64479 0.11111 3.55546 5 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 6 0.13465 3.43679 2.83851 3.34386 6 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 7 3.49812 0.12271 3.54478 2.87609 7 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 8 3.49812 0.12271 3.54478 2.87609 8 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 9 3.14603 2.63161 3.19198 0.16969 9 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 10 2.98656 3.64479 0.11111 3.55546 10 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 11 0.13465 3.43679 2.83851 3.34386 11 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 12 0.13465 3.43679 2.83851 3.34386 12 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 13 3.49812 0.12271 3.54478 2.87609 13 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 14 3.14603 2.63161 3.19198 0.16969 14 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 15 3.49812 0.12271 3.54478 2.87609 15 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 16 0.13465 3.43679 2.83851 3.34386 16 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 17 2.98656 3.64479 0.11111 3.55546 17 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 18 0.13465 3.43679 2.83851 3.34386 18 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 19 3.49812 0.12271 3.54478 2.87609 19 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 20 2.98656 3.64479 0.11111 3.55546 20 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 21 3.14603 2.63161 3.19198 0.16969 21 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 22 2.98656 3.64479 0.11111 3.55546 22 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 23 0.13465 3.43679 2.83851 3.34386 23 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 24 0.85624 1.61968 1.42525 1.98899 24 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 25 2.62143 1.53034 2.68674 0.44202 25 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 26 0.13465 3.43679 2.83851 3.34386 26 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 27 3.49812 0.12271 3.54478 2.87609 27 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 28 3.49812 0.12271 3.54478 2.87609 28 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 29 3.49812 0.12271 3.54478 2.87609 29 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 30 2.98656 3.64479 0.11111 3.55546 30 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 31 3.49812 0.12271 3.54478 2.87609 31 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 32 3.14603 2.63161 3.19198 0.16969 32 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 33 2.98656 3.64479 0.11111 3.55546 33 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 34 0.13465 3.43679 2.83851 3.34386 34 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 35 0.13465 3.43679 2.83851 3.34386 35 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 36 3.49812 0.12271 3.54478 2.87609 36 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 37 3.14603 2.63161 3.19198 0.16969 37 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 38 3.14603 2.63161 3.19198 0.16969 38 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 39 0.13465 3.43679 2.83851 3.34386 39 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 40 0.13465 3.43679 2.83851 3.34386 40 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 41 2.98656 3.64479 0.11111 3.55546 41 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 42 3.49812 0.12271 3.54478 2.87609 42 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 43 0.13465 3.43679 2.83851 3.34386 43 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 44 3.14603 2.63161 3.19198 0.16969 44 - - 1.38629 1.38629 1.38629 1.38629 0.03569 4.04386 4.04386 1.46634 0.26236 1.09861 0.40547 45 0.13465 3.43679 2.83851 3.34386 45 - - 1.38629 1.38629 1.38629 1.38629 0.01800 4.02618 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:04 2012 NSEQ 3 EFFN 3.000000 CKSUM 1737265017 STATS LOCAL MSV -7.9324 0.72043 STATS LOCAL VITERBI -7.8211 0.72043 STATS LOCAL FORWARD -3.8393 0.72043 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22596 1.26330 1.69225 1.42836 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:12 2012 NSEQ 12 EFFN 3.524414 CKSUM 2964998357 STATS LOCAL MSV -7.5619 0.71932 STATS LOCAL VITERBI -7.8274 0.71932 STATS LOCAL FORWARD -4.3051 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27870 1.36878 1.61837 1.31318 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 0.00000 * 1 3.15211 2.63547 3.19782 0.16877 1 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 2 3.15211 2.63547 3.19782 0.16877 2 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 3 3.15211 2.63547 3.19782 0.16877 3 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 4 2.62700 1.53267 2.69220 0.44003 4 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 5 2.99061 3.65075 0.11049 3.56205 5 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 6 0.13392 3.44273 2.84235 3.35037 6 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 7 3.50494 0.12196 3.55129 2.88100 7 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 8 3.50494 0.12196 3.55129 2.88100 8 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 9 3.15211 2.63547 3.19782 0.16877 9 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 10 2.99061 3.65075 0.11049 3.56205 10 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 11 0.13392 3.44273 2.84235 3.35037 11 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 12 0.13392 3.44273 2.84235 3.35037 12 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 13 3.50494 0.12196 3.55129 2.88100 13 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 14 3.15211 2.63547 3.19782 0.16877 14 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 15 3.50494 0.12196 3.55129 2.88100 15 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 16 0.13392 3.44273 2.84235 3.35037 16 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 17 1.96046 3.06086 0.27540 2.93570 17 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 18 0.29933 2.95963 1.90905 2.83659 18 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 19 3.50494 0.12196 3.55129 2.88100 19 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 20 2.99061 3.65075 0.11049 3.56205 20 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 21 3.15211 2.63547 3.19782 0.16877 21 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 22 2.99061 3.65075 0.11049 3.56205 22 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 23 0.13392 3.44273 2.84235 3.35037 23 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 24 3.15211 2.63547 3.19782 0.16877 24 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 25 3.15211 2.63547 3.19782 0.16877 25 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 26 0.13392 3.44273 2.84235 3.35037 26 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 27 3.50494 0.12196 3.55129 2.88100 27 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 28 3.50494 0.12196 3.55129 2.88100 28 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 29 3.50494 0.12196 3.55129 2.88100 29 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 30 2.99061 3.65075 0.11049 3.56205 30 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 31 3.50494 0.12196 3.55129 2.88100 31 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 32 3.15211 2.63547 3.19782 0.16877 32 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 33 2.99061 3.65075 0.11049 3.56205 33 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 34 0.13392 3.44273 2.84235 3.35037 34 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 35 0.13392 3.44273 2.84235 3.35037 35 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 36 3.50494 0.12196 3.55129 2.88100 36 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 37 3.15211 2.63547 3.19782 0.16877 37 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 38 3.15211 2.63547 3.19782 0.16877 38 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 39 0.13392 3.44273 2.84235 3.35037 39 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 40 0.13392 3.44273 2.84235 3.35037 40 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 41 2.99061 3.65075 0.11049 3.56205 41 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 42 3.50494 0.12196 3.55129 2.88100 42 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 43 0.13392 3.44273 2.84235 3.35037 43 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 44 3.15211 2.63547 3.19782 0.16877 44 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 45 0.13392 3.44273 2.84235 3.35037 45 - - 1.38629 1.38629 1.38629 1.38629 0.01794 4.02970 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:19 2012 NSEQ 2 EFFN 2.000000 CKSUM 2411741823 STATS LOCAL MSV -7.4996 0.72813 STATS LOCAL VITERBI -8.2421 0.72813 STATS LOCAL FORWARD -3.5693 0.72813 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29173 1.34306 1.49811 1.42459 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_foure_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:27 2012 NSEQ 9 EFFN 3.555176 CKSUM 2325224462 STATS LOCAL MSV -7.6336 0.71932 STATS LOCAL VITERBI -7.6152 0.71932 STATS LOCAL FORWARD -4.2181 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29437 1.30759 1.70004 1.29908 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 0.00000 * 1 3.16150 2.64143 3.20685 0.16736 1 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 2 1.60524 2.26043 2.40622 0.50303 2 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 3 3.16150 2.64143 3.20685 0.16736 3 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 4 3.16150 2.64143 3.20685 0.16736 4 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 5 2.99686 3.65992 0.10956 3.57220 5 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 6 0.13279 3.45189 2.84825 3.36042 6 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 7 3.51544 0.12080 3.56134 2.88856 7 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 8 3.51544 0.12080 3.56134 2.88856 8 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 9 3.16150 2.64143 3.20685 0.16736 9 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 10 3.51544 0.12080 3.56134 2.88856 10 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 11 0.13279 3.45189 2.84825 3.36042 11 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 12 0.13279 3.45189 2.84825 3.36042 12 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 13 3.51544 0.12080 3.56134 2.88856 13 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 14 3.16150 2.64143 3.20685 0.16736 14 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 15 3.51544 0.12080 3.56134 2.88856 15 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 16 0.13279 3.45189 2.84825 3.36042 16 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 17 2.99686 3.65992 0.10956 3.57220 17 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 18 3.16150 2.64143 3.20685 0.16736 18 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 19 3.51544 0.12080 3.56134 2.88856 19 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 20 2.99686 3.65992 0.10956 3.57220 20 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 21 0.67646 2.27465 2.22456 1.27069 21 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 22 2.99686 3.65992 0.10956 3.57220 22 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 23 0.13279 3.45189 2.84825 3.36042 23 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 24 3.16150 2.64143 3.20685 0.16736 24 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 25 3.16150 2.64143 3.20685 0.16736 25 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 26 0.13279 3.45189 2.84825 3.36042 26 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 27 3.51544 0.12080 3.56134 2.88856 27 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 28 3.51544 0.12080 3.56134 2.88856 28 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 29 3.51544 0.12080 3.56134 2.88856 29 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 30 2.99686 3.65992 0.10956 3.57220 30 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 31 3.51544 0.12080 3.56134 2.88856 31 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 32 3.16150 2.64143 3.20685 0.16736 32 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 33 2.99686 3.65992 0.10956 3.57220 33 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 34 0.13279 3.45189 2.84825 3.36042 34 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 35 0.13279 3.45189 2.84825 3.36042 35 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 36 3.51544 0.12080 3.56134 2.88856 36 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 37 3.16150 2.64143 3.20685 0.16736 37 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 38 3.16150 2.64143 3.20685 0.16736 38 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 39 0.13279 3.45189 2.84825 3.36042 39 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 40 0.13279 3.45189 2.84825 3.36042 40 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 41 2.99686 3.65992 0.10956 3.57220 41 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 42 3.51544 0.12080 3.56134 2.88856 42 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 43 0.13279 3.45189 2.84825 3.36042 43 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 44 3.16150 2.64143 3.20685 0.16736 44 - - 1.38629 1.38629 1.38629 1.38629 0.03537 4.05268 4.05268 1.46634 0.26236 1.09861 0.40547 45 0.13279 3.45189 2.84825 3.36042 45 - - 1.38629 1.38629 1.38629 1.38629 0.01784 4.03516 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:34 2012 NSEQ 4 EFFN 3.191406 CKSUM 3539407318 STATS LOCAL MSV -7.9359 0.71933 STATS LOCAL VITERBI -7.6471 0.71933 STATS LOCAL FORWARD -4.1152 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22385 1.20875 1.52623 1.66084 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 * 1 3.38354 0.13628 3.43507 2.79277 1 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 2 2.91732 3.54398 0.12206 3.44415 2 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 3 3.38354 0.13628 3.43507 2.79277 3 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 4 3.38354 0.13628 3.43507 2.79277 4 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 5 2.91732 3.54398 0.12206 3.44415 5 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 6 0.14770 3.33730 2.77393 3.23493 6 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 7 3.38354 0.13628 3.43507 2.79277 7 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 8 3.38354 0.13628 3.43507 2.79277 8 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 9 3.04545 2.56765 3.09524 0.18579 9 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 10 3.38354 0.13628 3.43507 2.79277 10 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 11 0.14770 3.33730 2.77393 3.23493 11 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 12 2.91732 3.54398 0.12206 3.44415 12 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 13 0.14770 3.33730 2.77393 3.23493 13 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 14 3.04545 2.56765 3.09524 0.18579 14 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 15 3.38354 0.13628 3.43507 2.79277 15 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 16 0.14770 3.33730 2.77393 3.23493 16 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 17 2.91732 3.54398 0.12206 3.44415 17 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 18 2.91732 3.54398 0.12206 3.44415 18 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 19 3.04545 2.56765 3.09524 0.18579 19 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 20 0.14770 3.33730 2.77393 3.23493 20 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 21 0.14770 3.33730 2.77393 3.23493 21 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 22 2.91732 3.54398 0.12206 3.44415 22 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 23 0.14770 3.33730 2.77393 3.23493 23 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 24 3.38354 0.13628 3.43507 2.79277 24 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 25 3.04545 2.56765 3.09524 0.18579 25 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 26 0.14770 3.33730 2.77393 3.23493 26 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 27 3.38354 0.13628 3.43507 2.79277 27 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 28 3.38354 0.13628 3.43507 2.79277 28 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 29 3.38354 0.13628 3.43507 2.79277 29 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 30 2.91732 3.54398 0.12206 3.44415 30 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 31 3.38354 0.13628 3.43507 2.79277 31 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 32 3.04545 2.56765 3.09524 0.18579 32 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 33 2.91732 3.54398 0.12206 3.44415 33 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 34 0.14770 3.33730 2.77393 3.23493 34 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 35 0.14770 3.33730 2.77393 3.23493 35 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 36 3.38354 0.13628 3.43507 2.79277 36 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 37 3.04545 2.56765 3.09524 0.18579 37 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 38 3.04545 2.56765 3.09524 0.18579 38 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 39 0.14770 3.33730 2.77393 3.23493 39 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 40 0.14770 3.33730 2.77393 3.23493 40 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 41 2.91732 3.54398 0.12206 3.44415 41 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 42 3.38354 0.13628 3.43507 2.79277 42 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 43 0.14770 3.33730 2.77393 3.23493 43 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 44 3.04545 2.56765 3.09524 0.18579 44 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 45 0.14770 3.33730 2.77393 3.23493 45 - - 1.38629 1.38629 1.38629 1.38629 0.01908 3.96867 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:42 2012 NSEQ 4 EFFN 3.222656 CKSUM 3193793341 STATS LOCAL MSV -8.0374 0.71931 STATS LOCAL VITERBI -7.7274 0.71931 STATS LOCAL FORWARD -4.1558 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34230 1.26497 1.45321 1.50198 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * 1 3.05586 2.57429 3.10526 0.18405 1 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 2 3.05586 2.57429 3.10526 0.18405 2 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 3 2.92468 3.55461 0.12085 3.45586 3 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 4 3.39555 0.13478 3.44658 2.80157 4 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 5 0.14627 3.34770 2.78072 3.24630 5 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 6 0.14627 3.34770 2.78072 3.24630 6 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 7 3.39555 0.13478 3.44658 2.80157 7 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 8 3.39555 0.13478 3.44658 2.80157 8 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 9 3.05586 2.57429 3.10526 0.18405 9 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 10 2.92468 3.55461 0.12085 3.45586 10 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 11 0.14627 3.34770 2.78072 3.24630 11 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 12 2.92468 3.55461 0.12085 3.45586 12 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 13 3.39555 0.13478 3.44658 2.80157 13 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 14 3.05586 2.57429 3.10526 0.18405 14 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 15 3.39555 0.13478 3.44658 2.80157 15 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 16 0.14627 3.34770 2.78072 3.24630 16 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 17 2.92468 3.55461 0.12085 3.45586 17 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 18 2.92468 3.55461 0.12085 3.45586 18 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 19 3.39555 0.13478 3.44658 2.80157 19 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 20 2.92468 3.55461 0.12085 3.45586 20 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 21 3.05586 2.57429 3.10526 0.18405 21 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 22 2.92468 3.55461 0.12085 3.45586 22 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 23 0.14627 3.34770 2.78072 3.24630 23 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 24 3.39555 0.13478 3.44658 2.80157 24 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 25 3.05586 2.57429 3.10526 0.18405 25 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 26 0.14627 3.34770 2.78072 3.24630 26 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 27 3.39555 0.13478 3.44658 2.80157 27 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 28 3.39555 0.13478 3.44658 2.80157 28 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 29 3.39555 0.13478 3.44658 2.80157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 30 2.92468 3.55461 0.12085 3.45586 30 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 31 3.39555 0.13478 3.44658 2.80157 31 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 32 3.05586 2.57429 3.10526 0.18405 32 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 33 2.92468 3.55461 0.12085 3.45586 33 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 34 0.14627 3.34770 2.78072 3.24630 34 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 35 0.14627 3.34770 2.78072 3.24630 35 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 36 3.39555 0.13478 3.44658 2.80157 36 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 37 3.05586 2.57429 3.10526 0.18405 37 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 38 3.05586 2.57429 3.10526 0.18405 38 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 39 0.14627 3.34770 2.78072 3.24630 39 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 40 0.14627 3.34770 2.78072 3.24630 40 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 41 2.92468 3.55461 0.12085 3.45586 41 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 42 3.39555 0.13478 3.44658 2.80157 42 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 43 0.14627 3.34770 2.78072 3.24630 43 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 44 3.05586 2.57429 3.10526 0.18405 44 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 45 0.14627 3.34770 2.78072 3.24630 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97456 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:49 2012 NSEQ 5 EFFN 3.618164 CKSUM 1272895122 STATS LOCAL MSV -7.8380 0.71931 STATS LOCAL VITERBI -7.5794 0.71931 STATS LOCAL FORWARD -4.2052 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.35166 1.37041 1.65451 1.21739 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 0.00000 * 1 0.78521 2.22532 2.20420 1.12207 1 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 2 3.18050 2.65347 3.22511 0.16455 2 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 3 3.18050 2.65347 3.22511 0.16455 3 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 4 3.18050 2.65347 3.22511 0.16455 4 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 5 3.00938 3.67836 0.10771 3.59263 5 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 6 0.13055 3.47036 2.86015 3.38070 6 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 7 3.53660 0.11852 3.58156 2.90375 7 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 8 3.53660 0.11852 3.58156 2.90375 8 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 9 3.18050 2.65347 3.22511 0.16455 9 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 10 3.53660 0.11852 3.58156 2.90375 10 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 11 0.13055 3.47036 2.86015 3.38070 11 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 12 1.13075 2.61649 0.65419 2.47353 12 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 13 3.53660 0.11852 3.58156 2.90375 13 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 14 3.18050 2.65347 3.22511 0.16455 14 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 15 3.53660 0.11852 3.58156 2.90375 15 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 16 0.13055 3.47036 2.86015 3.38070 16 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 17 3.00938 3.67836 0.10771 3.59263 17 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 18 3.18050 2.65347 3.22511 0.16455 18 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 19 3.53660 0.11852 3.58156 2.90375 19 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 20 3.00938 3.67836 0.10771 3.59263 20 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 21 3.18050 2.65347 3.22511 0.16455 21 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 22 3.00938 3.67836 0.10771 3.59263 22 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 23 0.13055 3.47036 2.86015 3.38070 23 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 24 3.18050 2.65347 3.22511 0.16455 24 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 25 3.18050 2.65347 3.22511 0.16455 25 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 26 0.13055 3.47036 2.86015 3.38070 26 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 27 3.53660 0.11852 3.58156 2.90375 27 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 28 3.53660 0.11852 3.58156 2.90375 28 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 29 3.53660 0.11852 3.58156 2.90375 29 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 30 3.00938 3.67836 0.10771 3.59263 30 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 31 3.53660 0.11852 3.58156 2.90375 31 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 32 3.18050 2.65347 3.22511 0.16455 32 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 33 3.00938 3.67836 0.10771 3.59263 33 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 34 0.13055 3.47036 2.86015 3.38070 34 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 35 0.13055 3.47036 2.86015 3.38070 35 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 36 3.18050 2.65347 3.22511 0.16455 36 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 37 3.18050 2.65347 3.22511 0.16455 37 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 38 3.18050 2.65347 3.22511 0.16455 38 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 39 0.13055 3.47036 2.86015 3.38070 39 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 40 0.13055 3.47036 2.86015 3.38070 40 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 41 3.00938 3.67836 0.10771 3.59263 41 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 42 3.53660 0.11852 3.58156 2.90375 42 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 43 0.13055 3.47036 2.86015 3.38070 43 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 44 3.18050 2.65347 3.22511 0.16455 44 - - 1.38629 1.38629 1.38629 1.38629 0.03498 4.06357 4.06357 1.46634 0.26236 1.09861 0.40547 45 0.13055 3.47036 2.86015 3.38070 45 - - 1.38629 1.38629 1.38629 1.38629 0.01764 4.04623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fouri_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:50:55 2012 NSEQ 8 EFFN 3.214844 CKSUM 1186784676 STATS LOCAL MSV -8.2425 0.71931 STATS LOCAL VITERBI -7.6389 0.71931 STATS LOCAL FORWARD -4.1147 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11464 1.26796 1.60640 1.66097 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 3.39256 0.13515 3.44371 2.79938 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 3.05326 2.57263 3.10276 0.18448 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 0.14663 3.34511 2.77903 3.24347 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 3.39256 0.13515 3.44371 2.79938 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 2.92285 3.55196 0.12115 3.45295 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 0.14663 3.34511 2.77903 3.24347 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 3.39256 0.13515 3.44371 2.79938 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 3.39256 0.13515 3.44371 2.79938 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.05326 2.57263 3.10276 0.18448 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 3.39256 0.13515 3.44371 2.79938 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 0.14663 3.34511 2.77903 3.24347 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 2.92285 3.55196 0.12115 3.45295 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 0.14663 3.34511 2.77903 3.24347 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.05326 2.57263 3.10276 0.18448 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.39256 0.13515 3.44371 2.79938 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 0.14663 3.34511 2.77903 3.24347 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 2.92285 3.55196 0.12115 3.45295 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 0.14663 3.34511 2.77903 3.24347 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 3.39256 0.13515 3.44371 2.79938 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 2.92285 3.55196 0.12115 3.45295 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 0.14663 3.34511 2.77903 3.24347 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 2.92285 3.55196 0.12115 3.45295 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 0.14663 3.34511 2.77903 3.24347 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 3.39256 0.13515 3.44371 2.79938 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 0.14663 3.34511 2.77903 3.24347 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 0.14663 3.34511 2.77903 3.24347 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 3.39256 0.13515 3.44371 2.79938 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 2.92285 3.55196 0.12115 3.45295 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 3.39256 0.13515 3.44371 2.79938 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 3.05326 2.57263 3.10276 0.18448 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 2.92285 3.55196 0.12115 3.45295 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 0.14663 3.34511 2.77903 3.24347 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 0.14663 3.34511 2.77903 3.24347 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 3.05326 2.57263 3.10276 0.18448 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 3.05326 2.57263 3.10276 0.18448 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.05326 2.57263 3.10276 0.18448 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 0.14663 3.34511 2.77903 3.24347 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 0.14663 3.34511 2.77903 3.24347 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 2.92285 3.55196 0.12115 3.45295 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 3.39256 0.13515 3.44371 2.79938 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 0.14663 3.34511 2.77903 3.24347 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 3.05326 2.57263 3.10276 0.18448 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 0.14663 3.34511 2.77903 3.24347 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:02 2012 NSEQ 3 EFFN 3.000000 CKSUM 2351947980 STATS LOCAL MSV -8.2579 0.72001 STATS LOCAL VITERBI -7.8277 0.72001 STATS LOCAL FORWARD -4.0042 0.72001 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16841 1.27582 1.44578 1.74654 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourk_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:10 2012 NSEQ 3 EFFN 3.000000 CKSUM 4061155062 STATS LOCAL MSV -8.1678 0.72014 STATS LOCAL VITERBI -7.7322 0.72014 STATS LOCAL FORWARD -3.9807 0.72014 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28224 1.27007 1.44862 1.57562 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourl_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:16 2012 NSEQ 3 EFFN 3.000000 CKSUM 292764534 STATS LOCAL MSV -8.1090 0.72071 STATS LOCAL VITERBI -7.7116 0.72071 STATS LOCAL FORWARD -4.0241 0.72071 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22065 1.35244 1.51762 1.48228 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.43223 0.62271 2.50508 1.22417 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourm_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 1681735314 STATS LOCAL MSV -7.3397 0.72792 STATS LOCAL VITERBI -8.2563 0.72792 STATS LOCAL FORWARD -3.7770 0.72792 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34610 1.29011 1.43454 1.48598 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourn_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:31 2012 NSEQ 4 EFFN 3.324219 CKSUM 308035123 STATS LOCAL MSV -8.2459 0.71933 STATS LOCAL VITERBI -7.6656 0.71933 STATS LOCAL FORWARD -4.1464 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33918 1.38085 1.61344 1.24697 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 * 1 0.14183 3.38076 2.80224 3.28247 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 2 3.08911 2.59546 3.13724 0.17860 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 3 3.08911 2.59546 3.13724 0.17860 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 4 3.08911 2.59546 3.13724 0.17860 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 5 2.94787 3.58826 0.11710 3.49298 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 6 0.14183 3.38076 2.80224 3.28247 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 7 3.43368 0.13014 3.48311 2.82941 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 8 3.43368 0.13014 3.48311 2.82941 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 9 3.08911 2.59546 3.13724 0.17860 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 10 3.43368 0.13014 3.48311 2.82941 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 11 0.14183 3.38076 2.80224 3.28247 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 12 2.94787 3.58826 0.11710 3.49298 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 13 3.43368 0.13014 3.48311 2.82941 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 14 3.08911 2.59546 3.13724 0.17860 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 15 3.43368 0.13014 3.48311 2.82941 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 16 0.14183 3.38076 2.80224 3.28247 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 17 2.94787 3.58826 0.11710 3.49298 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 18 3.08911 2.59546 3.13724 0.17860 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 19 3.43368 0.13014 3.48311 2.82941 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 20 2.94787 3.58826 0.11710 3.49298 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 21 3.08911 2.59546 3.13724 0.17860 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 22 2.94787 3.58826 0.11710 3.49298 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 23 0.14183 3.38076 2.80224 3.28247 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 24 3.08911 2.59546 3.13724 0.17860 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 25 3.08911 2.59546 3.13724 0.17860 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 26 0.14183 3.38076 2.80224 3.28247 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 27 3.43368 0.13014 3.48311 2.82941 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 28 3.43368 0.13014 3.48311 2.82941 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 29 3.43368 0.13014 3.48311 2.82941 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 30 2.94787 3.58826 0.11710 3.49298 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 31 3.43368 0.13014 3.48311 2.82941 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 32 3.08911 2.59546 3.13724 0.17860 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 33 2.94787 3.58826 0.11710 3.49298 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 34 0.14183 3.38076 2.80224 3.28247 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 35 0.14183 3.38076 2.80224 3.28247 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 36 3.08911 2.59546 3.13724 0.17860 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 37 3.08911 2.59546 3.13724 0.17860 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 38 3.08911 2.59546 3.13724 0.17860 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 39 0.14183 3.38076 2.80224 3.28247 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 40 0.14183 3.38076 2.80224 3.28247 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 41 2.94787 3.58826 0.11710 3.49298 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 42 3.43368 0.13014 3.48311 2.82941 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 43 0.14183 3.38076 2.80224 3.28247 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 44 3.08911 2.59546 3.13724 0.17860 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 45 0.14183 3.38076 2.80224 3.28247 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99346 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fouro_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:39 2012 NSEQ 3 EFFN 3.000000 CKSUM 156050492 STATS LOCAL MSV -8.0097 0.72066 STATS LOCAL VITERBI -7.7228 0.72066 STATS LOCAL FORWARD -4.1160 0.72066 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34354 1.31352 1.69463 1.24988 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourp_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:51:45 2012 NSEQ 3 EFFN 3.000000 CKSUM 435892151 STATS LOCAL MSV -8.2073 0.72146 STATS LOCAL VITERBI -7.7951 0.72146 STATS LOCAL FORWARD -4.0277 0.72146 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39771 1.35938 1.58160 1.23659 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.42752 1.34012 2.49742 0.56628 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.11867 2.11575 1.35978 0.68806 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:33 2012 NSEQ 3 EFFN 3.000000 CKSUM 2215319068 STATS LOCAL MSV -8.1736 0.72037 STATS LOCAL VITERBI -7.8757 0.72037 STATS LOCAL FORWARD -4.0709 0.72037 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22282 1.39082 1.52048 1.43496 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:56:58 2012 NSEQ 3 EFFN 3.000000 CKSUM 957197694 STATS LOCAL MSV -7.8664 0.72063 STATS LOCAL VITERBI -7.7547 0.72063 STATS LOCAL FORWARD -4.2553 0.72063 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34194 1.38068 1.60488 1.25057 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.97980 2.52563 3.03204 0.19727 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 0.15719 3.27118 2.73043 3.16274 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.86982 3.47591 0.13017 3.36931 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:59:36 2012 NSEQ 6 EFFN 3.249023 CKSUM 2236108995 STATS LOCAL MSV -8.0378 0.71932 STATS LOCAL VITERBI -7.6712 0.71932 STATS LOCAL FORWARD -4.0582 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33869 1.34207 1.31167 1.57438 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 * 1 3.40558 0.13354 3.45619 2.80891 1 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 2 2.93080 3.56347 0.11985 3.46564 2 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 3 3.06457 2.57984 3.11364 0.18260 3 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 4 3.06457 2.57984 3.11364 0.18260 4 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 5 2.93080 3.56347 0.11985 3.46564 5 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 6 2.93080 3.56347 0.11985 3.46564 6 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 7 3.40558 0.13354 3.45619 2.80891 7 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 8 3.40558 0.13354 3.45619 2.80891 8 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 9 3.06457 2.57984 3.11364 0.18260 9 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 10 3.40558 0.13354 3.45619 2.80891 10 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 11 0.14509 3.35639 2.78639 3.25580 11 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 12 2.93080 3.56347 0.11985 3.46564 12 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 13 0.14509 3.35639 2.78639 3.25580 13 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 14 3.06457 2.57984 3.11364 0.18260 14 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 15 3.40558 0.13354 3.45619 2.80891 15 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 16 0.14509 3.35639 2.78639 3.25580 16 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 17 2.93080 3.56347 0.11985 3.46564 17 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 18 2.93080 3.56347 0.11985 3.46564 18 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 19 2.93080 3.56347 0.11985 3.46564 19 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 20 0.14509 3.35639 2.78639 3.25580 20 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 21 2.93080 3.56347 0.11985 3.46564 21 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 22 2.93080 3.56347 0.11985 3.46564 22 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 23 0.14509 3.35639 2.78639 3.25580 23 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 24 3.06457 2.57984 3.11364 0.18260 24 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 25 2.81213 0.32485 2.87865 1.82586 25 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 26 0.14509 3.35639 2.78639 3.25580 26 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 27 3.40558 0.13354 3.45619 2.80891 27 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 28 3.40558 0.13354 3.45619 2.80891 28 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 29 3.40558 0.13354 3.45619 2.80891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 30 2.93080 3.56347 0.11985 3.46564 30 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 31 3.40558 0.13354 3.45619 2.80891 31 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 32 3.40558 0.13354 3.45619 2.80891 32 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 33 2.93080 3.56347 0.11985 3.46564 33 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 34 0.14509 3.35639 2.78639 3.25580 34 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 35 0.14509 3.35639 2.78639 3.25580 35 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 36 3.06457 2.57984 3.11364 0.18260 36 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 37 3.06457 2.57984 3.11364 0.18260 37 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 38 3.06457 2.57984 3.11364 0.18260 38 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 39 0.14509 3.35639 2.78639 3.25580 39 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 40 0.14509 3.35639 2.78639 3.25580 40 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 41 2.93080 3.56347 0.11985 3.46564 41 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 42 3.40558 0.13354 3.45619 2.80891 42 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 43 0.14509 3.35639 2.78639 3.25580 43 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 44 3.06457 2.57984 3.11364 0.18260 44 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 45 0.14509 3.35639 2.78639 3.25580 45 - - 1.38629 1.38629 1.38629 1.38629 0.01887 3.97950 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:49:27 2012 NSEQ 33 EFFN 3.782593 CKSUM 1346394840 STATS LOCAL MSV -6.9525 0.71933 STATS LOCAL VITERBI -7.7827 0.71933 STATS LOCAL FORWARD -4.3549 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33115 1.23617 1.49619 1.50800 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 0.00000 * 1 1.79792 1.68197 1.18854 1.06803 1 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 2 3.58965 0.11299 3.63221 2.94165 2 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 3 3.58965 0.11299 3.63221 2.94165 3 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 4 3.22866 2.68399 3.27137 0.15765 4 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 5 3.04057 3.72442 0.10324 3.64370 5 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 6 0.12511 3.51682 2.89001 3.43172 6 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 7 3.58965 0.11299 3.63221 2.94165 7 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 8 3.58965 0.11299 3.63221 2.94165 8 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 9 3.22866 2.68399 3.27137 0.15765 9 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 10 3.58965 0.11299 3.63221 2.94165 10 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 11 3.04057 3.72442 0.10324 3.64370 11 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 12 3.04057 3.72442 0.10324 3.64370 12 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 13 0.12511 3.51682 2.89001 3.43172 13 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 14 3.22866 2.68399 3.27137 0.15765 14 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 15 3.58965 0.11299 3.63221 2.94165 15 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 16 0.12511 3.51682 2.89001 3.43172 16 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 17 3.04057 3.72442 0.10324 3.64370 17 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 18 0.70542 2.28199 2.24204 1.21141 18 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 19 3.09248 0.23985 3.15223 2.07858 19 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 20 3.04057 3.72442 0.10324 3.64370 20 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 21 3.22866 2.68399 3.27137 0.15765 21 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 22 3.04057 3.72442 0.10324 3.64370 22 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 23 0.12511 3.51682 2.89001 3.43172 23 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 24 0.86847 1.42296 1.86945 1.68632 24 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 25 3.22866 2.68399 3.27137 0.15765 25 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 26 0.12511 3.51682 2.89001 3.43172 26 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 27 3.58965 0.11299 3.63221 2.94165 27 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 28 3.58965 0.11299 3.63221 2.94165 28 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 29 3.58965 0.11299 3.63221 2.94165 29 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 30 3.04057 3.72442 0.10324 3.64370 30 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 31 3.58965 0.11299 3.63221 2.94165 31 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 32 3.22866 2.68399 3.27137 0.15765 32 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 33 3.04057 3.72442 0.10324 3.64370 33 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 34 0.12511 3.51682 2.89001 3.43172 34 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 35 0.12511 3.51682 2.89001 3.43172 35 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 36 3.58965 0.11299 3.63221 2.94165 36 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 37 3.22866 2.68399 3.27137 0.15765 37 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 38 3.22866 2.68399 3.27137 0.15765 38 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 39 0.12511 3.51682 2.89001 3.43172 39 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 40 0.12511 3.51682 2.89001 3.43172 40 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 41 3.04057 3.72442 0.10324 3.64370 41 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 42 3.58965 0.11299 3.63221 2.94165 42 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 43 0.12511 3.51682 2.89001 3.43172 43 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 44 3.22866 2.68399 3.27137 0.15765 44 - - 1.38629 1.38629 1.38629 1.38629 0.03400 4.09144 4.09144 1.46634 0.26236 1.09861 0.40547 45 0.12511 3.51682 2.89001 3.43172 45 - - 1.38629 1.38629 1.38629 1.38629 0.01715 4.07458 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:55:54 2012 NSEQ 11 EFFN 3.386475 CKSUM 2691176843 STATS LOCAL MSV -7.6622 0.71931 STATS LOCAL VITERBI -7.6860 0.71931 STATS LOCAL FORWARD -4.0876 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.09796 1.45969 1.60061 1.45943 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 0.00000 * 1 1.46370 2.19900 2.30983 0.58262 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 2 3.10905 2.60814 3.15643 0.17542 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 3 3.10905 2.60814 3.15643 0.17542 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 4 3.10905 2.60814 3.15643 0.17542 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 5 2.96157 3.60822 0.11494 3.51502 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 6 0.13926 3.40047 2.81503 3.30406 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 7 3.45638 0.12747 3.50485 2.84591 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 8 3.45638 0.12747 3.50485 2.84591 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 9 3.10905 2.60814 3.15643 0.17542 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 10 3.45638 0.12747 3.50485 2.84591 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 11 0.13926 3.40047 2.81503 3.30406 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 12 2.96157 3.60822 0.11494 3.51502 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 13 0.13926 3.40047 2.81503 3.30406 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 14 3.10905 2.60814 3.15643 0.17542 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 15 3.10905 2.60814 3.15643 0.17542 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 16 0.13926 3.40047 2.81503 3.30406 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 17 2.96157 3.60822 0.11494 3.51502 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 18 0.13926 3.40047 2.81503 3.30406 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 19 3.45638 0.12747 3.50485 2.84591 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 20 2.96157 3.60822 0.11494 3.51502 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 21 0.13926 3.40047 2.81503 3.30406 21 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 22 2.96157 3.60822 0.11494 3.51502 22 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 23 0.13926 3.40047 2.81503 3.30406 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 24 0.13926 3.40047 2.81503 3.30406 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 25 0.13926 3.40047 2.81503 3.30406 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 26 0.13926 3.40047 2.81503 3.30406 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 27 3.45638 0.12747 3.50485 2.84591 27 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 28 3.45638 0.12747 3.50485 2.84591 28 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 29 3.45638 0.12747 3.50485 2.84591 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 30 2.96157 3.60822 0.11494 3.51502 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 31 3.45638 0.12747 3.50485 2.84591 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 32 3.45638 0.12747 3.50485 2.84591 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 33 2.96157 3.60822 0.11494 3.51502 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 34 0.13926 3.40047 2.81503 3.30406 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 35 0.13926 3.40047 2.81503 3.30406 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 36 3.10905 2.60814 3.15643 0.17542 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 37 3.10905 2.60814 3.15643 0.17542 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 38 3.10905 2.60814 3.15643 0.17542 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 39 0.13926 3.40047 2.81503 3.30406 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 40 0.13926 3.40047 2.81503 3.30406 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 41 2.96157 3.60822 0.11494 3.51502 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 42 3.45638 0.12747 3.50485 2.84591 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 43 0.13926 3.40047 2.81503 3.30406 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 44 3.10905 2.60814 3.15643 0.17542 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02293 4.02293 1.46634 0.26236 1.09861 0.40547 45 0.13926 3.40047 2.81503 3.30406 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00487 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:59:03 2012 NSEQ 3 EFFN 3.000000 CKSUM 1512331715 STATS LOCAL MSV -8.1035 0.72050 STATS LOCAL VITERBI -7.6844 0.72050 STATS LOCAL FORWARD -3.8942 0.72050 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22117 1.29747 1.43994 1.63500 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.43223 0.62271 2.50508 1.22417 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:30 2012 NSEQ 18 EFFN 3.563965 CKSUM 135894155 STATS LOCAL MSV -7.5770 0.71933 STATS LOCAL VITERBI -7.7641 0.71933 STATS LOCAL FORWARD -4.1313 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24017 1.30645 1.59844 1.43686 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 0.00000 * 1 3.16417 2.64312 3.20941 0.16696 1 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 2 3.16417 2.64312 3.20941 0.16696 2 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 3 3.16417 2.64312 3.20941 0.16696 3 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 4 3.51842 0.12048 3.56419 2.89070 4 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 5 2.99862 3.66252 0.10930 3.57508 5 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 6 0.13247 3.45449 2.84993 3.36328 6 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 7 3.51842 0.12048 3.56419 2.89070 7 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 8 3.51842 0.12048 3.56419 2.89070 8 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 9 3.16417 2.64312 3.20941 0.16696 9 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 10 2.99862 3.66252 0.10930 3.57508 10 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 11 0.13247 3.45449 2.84993 3.36328 11 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 12 0.13247 3.45449 2.84993 3.36328 12 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 13 3.06631 0.23765 3.12667 2.11143 13 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 14 3.16417 2.64312 3.20941 0.16696 14 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 15 3.51842 0.12048 3.56419 2.89070 15 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 16 0.13247 3.45449 2.84993 3.36328 16 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 17 2.99862 3.66252 0.10930 3.57508 17 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 18 0.13247 3.45449 2.84993 3.36328 18 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 19 3.51842 0.12048 3.56419 2.89070 19 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 20 2.99862 3.66252 0.10930 3.57508 20 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 21 3.16417 2.64312 3.20941 0.16696 21 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 22 2.99862 3.66252 0.10930 3.57508 22 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 23 0.13247 3.45449 2.84993 3.36328 23 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 24 0.66567 2.24869 1.69048 1.62913 24 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 25 2.50555 1.22857 2.57478 0.59877 25 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 26 0.13247 3.45449 2.84993 3.36328 26 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 27 3.51842 0.12048 3.56419 2.89070 27 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 28 3.51842 0.12048 3.56419 2.89070 28 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 29 3.51842 0.12048 3.56419 2.89070 29 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 30 2.99862 3.66252 0.10930 3.57508 30 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 31 3.51842 0.12048 3.56419 2.89070 31 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 32 3.16417 2.64312 3.20941 0.16696 32 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 33 2.99862 3.66252 0.10930 3.57508 33 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 34 0.13247 3.45449 2.84993 3.36328 34 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 35 0.13247 3.45449 2.84993 3.36328 35 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 36 3.51842 0.12048 3.56419 2.89070 36 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 37 3.16417 2.64312 3.20941 0.16696 37 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 38 3.16417 2.64312 3.20941 0.16696 38 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 39 0.13247 3.45449 2.84993 3.36328 39 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 40 0.13247 3.45449 2.84993 3.36328 40 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 41 2.99862 3.66252 0.10930 3.57508 41 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 42 3.51842 0.12048 3.56419 2.89070 42 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 43 0.13247 3.45449 2.84993 3.36328 43 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 44 3.16417 2.64312 3.20941 0.16696 44 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 45 0.13247 3.45449 2.84993 3.36328 45 - - 1.38629 1.38629 1.38629 1.38629 0.01781 4.03671 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:37 2012 NSEQ 4 EFFN 3.363281 CKSUM 3601354860 STATS LOCAL MSV -8.0016 0.71931 STATS LOCAL VITERBI -7.7630 0.71931 STATS LOCAL FORWARD -4.1610 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27366 1.29926 1.52617 1.46927 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 * 1 0.14020 3.39317 2.81030 3.29606 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 2 3.10166 2.60344 3.14932 0.17659 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 3 2.41261 0.95620 2.48463 0.81484 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 4 3.44798 0.12845 3.49681 2.83981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 5 2.95651 3.60084 0.11574 3.50687 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 6 0.14020 3.39317 2.81030 3.29606 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 7 3.44798 0.12845 3.49681 2.83981 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 8 3.44798 0.12845 3.49681 2.83981 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 9 3.10166 2.60344 3.14932 0.17659 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 10 2.95651 3.60084 0.11574 3.50687 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 11 0.14020 3.39317 2.81030 3.29606 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 12 0.14020 3.39317 2.81030 3.29606 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 13 3.44798 0.12845 3.49681 2.83981 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 14 3.10166 2.60344 3.14932 0.17659 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 15 3.44798 0.12845 3.49681 2.83981 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 16 0.14020 3.39317 2.81030 3.29606 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 17 2.95651 3.60084 0.11574 3.50687 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 18 0.14020 3.39317 2.81030 3.29606 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 19 3.44798 0.12845 3.49681 2.83981 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 20 2.95651 3.60084 0.11574 3.50687 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 21 3.10166 2.60344 3.14932 0.17659 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 22 2.95651 3.60084 0.11574 3.50687 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 23 2.95651 3.60084 0.11574 3.50687 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 24 3.10166 2.60344 3.14932 0.17659 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 25 3.10166 2.60344 3.14932 0.17659 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 26 0.14020 3.39317 2.81030 3.29606 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 27 3.44798 0.12845 3.49681 2.83981 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 28 3.44798 0.12845 3.49681 2.83981 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 29 3.44798 0.12845 3.49681 2.83981 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 30 2.95651 3.60084 0.11574 3.50687 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 31 3.44798 0.12845 3.49681 2.83981 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 32 3.10166 2.60344 3.14932 0.17659 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 33 2.95651 3.60084 0.11574 3.50687 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 34 0.14020 3.39317 2.81030 3.29606 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 35 0.14020 3.39317 2.81030 3.29606 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 36 3.44798 0.12845 3.49681 2.83981 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 37 3.10166 2.60344 3.14932 0.17659 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 38 3.10166 2.60344 3.14932 0.17659 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 39 0.14020 3.39317 2.81030 3.29606 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 40 0.14020 3.39317 2.81030 3.29606 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 41 2.95651 3.60084 0.11574 3.50687 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 42 3.44798 0.12845 3.49681 2.83981 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 43 0.14020 3.39317 2.81030 3.29606 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 44 3.10166 2.60344 3.14932 0.17659 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 45 0.14020 3.39317 2.81030 3.29606 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00063 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:52 2012 NSEQ 7 EFFN 3.359863 CKSUM 2609358306 STATS LOCAL MSV -8.0369 0.71932 STATS LOCAL VITERBI -7.7132 0.71932 STATS LOCAL FORWARD -4.2915 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27593 1.29455 1.52632 1.47197 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 0.00000 * 1 3.10057 2.60274 3.14826 0.17676 1 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 2 3.10057 2.60274 3.14826 0.17676 2 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 3 3.10057 2.60274 3.14826 0.17676 3 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 4 3.44674 0.12859 3.49562 2.83891 4 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 5 2.95576 3.59975 0.11586 3.50566 5 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 6 0.14034 3.39209 2.80960 3.29488 6 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 7 3.44674 0.12859 3.49562 2.83891 7 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 8 3.44674 0.12859 3.49562 2.83891 8 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 9 3.10057 2.60274 3.14826 0.17676 9 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 10 2.95576 3.59975 0.11586 3.50566 10 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 11 0.14034 3.39209 2.80960 3.29488 11 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 12 0.14034 3.39209 2.80960 3.29488 12 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 13 3.44674 0.12859 3.49562 2.83891 13 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 14 3.10057 2.60274 3.14826 0.17676 14 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 15 3.44674 0.12859 3.49562 2.83891 15 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 16 0.14034 3.39209 2.80960 3.29488 16 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 17 0.14034 3.39209 2.80960 3.29488 17 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 18 2.95576 3.59975 0.11586 3.50566 18 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 19 3.44674 0.12859 3.49562 2.83891 19 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 20 2.95576 3.59975 0.11586 3.50566 20 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 21 3.10057 2.60274 3.14826 0.17676 21 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 22 2.95576 3.59975 0.11586 3.50566 22 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 23 0.14034 3.39209 2.80960 3.29488 23 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 24 2.95576 3.59975 0.11586 3.50566 24 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 25 2.42382 0.79725 2.49629 0.97165 25 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 26 0.14034 3.39209 2.80960 3.29488 26 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 27 3.44674 0.12859 3.49562 2.83891 27 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 28 3.44674 0.12859 3.49562 2.83891 28 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 29 3.44674 0.12859 3.49562 2.83891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 30 2.95576 3.59975 0.11586 3.50566 30 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 31 3.44674 0.12859 3.49562 2.83891 31 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 32 3.10057 2.60274 3.14826 0.17676 32 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 33 2.95576 3.59975 0.11586 3.50566 33 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 34 0.14034 3.39209 2.80960 3.29488 34 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 35 0.14034 3.39209 2.80960 3.29488 35 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 36 3.44674 0.12859 3.49562 2.83891 36 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 37 3.10057 2.60274 3.14826 0.17676 37 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 38 3.10057 2.60274 3.14826 0.17676 38 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 39 0.14034 3.39209 2.80960 3.29488 39 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 40 0.14034 3.39209 2.80960 3.29488 40 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 41 2.95576 3.59975 0.11586 3.50566 41 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 42 3.44674 0.12859 3.49562 2.83891 42 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 43 0.14034 3.39209 2.80960 3.29488 43 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 44 3.10057 2.60274 3.14826 0.17676 44 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01816 4.01816 1.46634 0.26236 1.09861 0.40547 45 0.14034 3.39209 2.80960 3.29488 45 - - 1.38629 1.38629 1.38629 1.38629 0.01849 4.00001 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:54:59 2012 NSEQ 4 EFFN 3.339844 CKSUM 231546967 STATS LOCAL MSV -8.0309 0.71933 STATS LOCAL VITERBI -7.7157 0.71933 STATS LOCAL FORWARD -4.0543 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23306 1.38825 1.51451 1.43057 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 * 1 3.09414 2.59866 3.14209 0.17779 1 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 2 3.09414 2.59866 3.14209 0.17779 2 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 3 3.09414 2.59866 3.14209 0.17779 3 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 4 3.43942 0.12946 3.48861 2.83359 4 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 5 2.95135 3.59331 0.11655 3.49856 5 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 6 0.14117 3.38574 2.80548 3.28793 6 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 7 3.43942 0.12946 3.48861 2.83359 7 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 8 3.43942 0.12946 3.48861 2.83359 8 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 9 3.09414 2.59866 3.14209 0.17779 9 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 10 2.95135 3.59331 0.11655 3.49856 10 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 11 0.14117 3.38574 2.80548 3.28793 11 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 12 2.95135 3.59331 0.11655 3.49856 12 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 13 3.43942 0.12946 3.48861 2.83359 13 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 14 3.09414 2.59866 3.14209 0.17779 14 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 15 0.14117 3.38574 2.80548 3.28793 15 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 16 0.14117 3.38574 2.80548 3.28793 16 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 17 0.14117 3.38574 2.80548 3.28793 17 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 18 2.95135 3.59331 0.11655 3.49856 18 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 19 3.43942 0.12946 3.48861 2.83359 19 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 20 2.95135 3.59331 0.11655 3.49856 20 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 21 3.09414 2.59866 3.14209 0.17779 21 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 22 2.95135 3.59331 0.11655 3.49856 22 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 23 0.14117 3.38574 2.80548 3.28793 23 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 24 0.39569 2.76637 1.65002 2.63317 24 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 25 3.09414 2.59866 3.14209 0.17779 25 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 26 0.14117 3.38574 2.80548 3.28793 26 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 27 3.43942 0.12946 3.48861 2.83359 27 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 28 3.43942 0.12946 3.48861 2.83359 28 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 29 3.43942 0.12946 3.48861 2.83359 29 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 30 2.95135 3.59331 0.11655 3.49856 30 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 31 3.43942 0.12946 3.48861 2.83359 31 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 32 3.09414 2.59866 3.14209 0.17779 32 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 33 2.95135 3.59331 0.11655 3.49856 33 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 34 0.14117 3.38574 2.80548 3.28793 34 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 35 0.14117 3.38574 2.80548 3.28793 35 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 36 3.43942 0.12946 3.48861 2.83359 36 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 37 3.09414 2.59866 3.14209 0.17779 37 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 38 3.09414 2.59866 3.14209 0.17779 38 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 39 0.14117 3.38574 2.80548 3.28793 39 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 40 0.14117 3.38574 2.80548 3.28793 40 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 41 2.95135 3.59331 0.11655 3.49856 41 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 42 3.43942 0.12946 3.48861 2.83359 42 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 43 0.14117 3.38574 2.80548 3.28793 43 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 44 3.09414 2.59866 3.14209 0.17779 44 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 45 0.14117 3.38574 2.80548 3.28793 45 - - 1.38629 1.38629 1.38629 1.38629 0.01855 3.99634 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixe_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:55:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 1628112068 STATS LOCAL MSV -7.5032 0.72841 STATS LOCAL VITERBI -8.3390 0.72841 STATS LOCAL FORWARD -3.4341 0.72841 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28858 1.32680 1.43161 1.51373 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.15554 1.00938 2.23102 0.88601 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:55:09 2012 NSEQ 2 EFFN 2.000000 CKSUM 3055619897 STATS LOCAL MSV -7.4441 0.72810 STATS LOCAL VITERBI -8.2961 0.72810 STATS LOCAL FORWARD -3.6529 0.72810 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24155 1.29109 1.56843 1.47965 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:55:16 2012 NSEQ 7 EFFN 3.407715 CKSUM 1378068430 STATS LOCAL MSV -7.5717 0.71933 STATS LOCAL VITERBI -7.7982 0.71933 STATS LOCAL FORWARD -4.1398 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27368 1.31689 1.57646 1.40435 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 0.00000 * 1 3.11579 2.61241 3.16290 0.17436 1 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 2 3.11579 2.61241 3.16290 0.17436 2 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 3 3.11579 2.61241 3.16290 0.17436 3 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 4 3.11579 2.61241 3.16290 0.17436 4 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 5 2.96616 3.61492 0.11423 3.52243 5 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 6 0.13840 3.40710 2.81933 3.31132 6 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 7 3.46401 0.12658 3.51215 2.85144 7 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 8 3.46401 0.12658 3.51215 2.85144 8 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 9 3.11579 2.61241 3.16290 0.17436 9 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 10 2.96616 3.61492 0.11423 3.52243 10 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 11 0.13840 3.40710 2.81933 3.31132 11 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 12 0.13840 3.40710 2.81933 3.31132 12 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 13 3.46401 0.12658 3.51215 2.85144 13 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 14 3.11579 2.61241 3.16290 0.17436 14 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 15 3.46401 0.12658 3.51215 2.85144 15 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 16 0.13840 3.40710 2.81933 3.31132 16 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 17 2.96616 3.61492 0.11423 3.52243 17 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 18 3.11579 2.61241 3.16290 0.17436 18 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 19 3.46401 0.12658 3.51215 2.85144 19 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 20 2.96616 3.61492 0.11423 3.52243 20 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 21 0.13840 3.40710 2.81933 3.31132 21 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 22 2.96616 3.61492 0.11423 3.52243 22 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 23 0.13840 3.40710 2.81933 3.31132 23 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 24 2.10784 2.18574 0.86149 1.06835 24 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 25 3.46401 0.12658 3.51215 2.85144 25 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 26 0.13840 3.40710 2.81933 3.31132 26 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 27 3.46401 0.12658 3.51215 2.85144 27 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 28 3.46401 0.12658 3.51215 2.85144 28 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 29 3.46401 0.12658 3.51215 2.85144 29 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 30 2.96616 3.61492 0.11423 3.52243 30 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 31 3.46401 0.12658 3.51215 2.85144 31 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 32 3.11579 2.61241 3.16290 0.17436 32 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 33 2.96616 3.61492 0.11423 3.52243 33 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 34 0.13840 3.40710 2.81933 3.31132 34 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 35 0.13840 3.40710 2.81933 3.31132 35 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 36 3.46401 0.12658 3.51215 2.85144 36 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 37 3.11579 2.61241 3.16290 0.17436 37 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 38 3.11579 2.61241 3.16290 0.17436 38 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 39 0.13840 3.40710 2.81933 3.31132 39 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 40 0.13840 3.40710 2.81933 3.31132 40 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 41 2.96616 3.61492 0.11423 3.52243 41 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 42 3.46401 0.12658 3.51215 2.85144 42 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 43 0.13840 3.40710 2.81933 3.31132 43 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 44 3.11579 2.61241 3.16290 0.17436 44 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 45 0.13840 3.40710 2.81933 3.31132 45 - - 1.38629 1.38629 1.38629 1.38629 0.01832 4.00874 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:50 2012 NSEQ 3 EFFN 3.000000 CKSUM 2702931191 STATS LOCAL MSV -8.1252 0.72211 STATS LOCAL VITERBI -7.8013 0.72211 STATS LOCAL FORWARD -4.0275 0.72211 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27401 1.27647 1.47321 1.55077 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.56013 2.54906 1.34493 2.40626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 1.31182 2.57335 0.56876 2.42854 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.08990 1.41165 0.68330 2.05875 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.09644 0.73721 1.35192 1.96671 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:57:08 2012 NSEQ 20 EFFN 3.813477 CKSUM 482766231 STATS LOCAL MSV -7.0524 0.71931 STATS LOCAL VITERBI -7.7040 0.71931 STATS LOCAL FORWARD -4.3542 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29024 1.29052 1.51005 1.47504 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 0.00000 * 1 0.86422 2.22193 2.22033 1.01708 1 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 2 3.23747 2.68958 3.27984 0.15643 2 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 3 3.04620 3.73275 0.10245 3.65294 3 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 4 3.59927 0.11202 3.64140 2.94850 4 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 5 0.12415 3.52528 2.89544 3.44100 5 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 6 0.12415 3.52528 2.89544 3.44100 6 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 7 3.59927 0.11202 3.64140 2.94850 7 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 8 3.59927 0.11202 3.64140 2.94850 8 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 9 3.23747 2.68958 3.27984 0.15643 9 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 10 3.04620 3.73275 0.10245 3.65294 10 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 11 0.12415 3.52528 2.89544 3.44100 11 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 12 1.69592 2.94764 0.35053 2.81692 12 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 13 3.59927 0.11202 3.64140 2.94850 13 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 14 3.23747 2.68958 3.27984 0.15643 14 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 15 3.59927 0.11202 3.64140 2.94850 15 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 16 0.12415 3.52528 2.89544 3.44100 16 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 17 3.04620 3.73275 0.10245 3.65294 17 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 18 2.15720 2.22527 0.88333 1.01360 18 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 19 3.59927 0.11202 3.64140 2.94850 19 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 20 3.04620 3.73275 0.10245 3.65294 20 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 21 3.23747 2.68958 3.27984 0.15643 21 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 22 3.04620 3.73275 0.10245 3.65294 22 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 23 0.12415 3.52528 2.89544 3.44100 23 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 24 2.88047 1.89372 2.93767 0.30057 24 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 25 3.23747 2.68958 3.27984 0.15643 25 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 26 0.12415 3.52528 2.89544 3.44100 26 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 27 3.59927 0.11202 3.64140 2.94850 27 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 28 3.59927 0.11202 3.64140 2.94850 28 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 29 3.59927 0.11202 3.64140 2.94850 29 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 30 3.04620 3.73275 0.10245 3.65294 30 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 31 3.59927 0.11202 3.64140 2.94850 31 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 32 2.64594 1.44143 2.71139 0.46836 32 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 33 3.04620 3.73275 0.10245 3.65294 33 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 34 0.12415 3.52528 2.89544 3.44100 34 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 35 0.12415 3.52528 2.89544 3.44100 35 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 36 3.59927 0.11202 3.64140 2.94850 36 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 37 3.23747 2.68958 3.27984 0.15643 37 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 38 3.23747 2.68958 3.27984 0.15643 38 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 39 0.12415 3.52528 2.89544 3.44100 39 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 40 0.12415 3.52528 2.89544 3.44100 40 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 41 3.04620 3.73275 0.10245 3.65294 41 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 42 3.59927 0.11202 3.64140 2.94850 42 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 43 0.12415 3.52528 2.89544 3.44100 43 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 44 3.23747 2.68958 3.27984 0.15643 44 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09659 4.09659 1.46634 0.26236 1.09861 0.40547 45 0.12415 3.52528 2.89544 3.44100 45 - - 1.38629 1.38629 1.38629 1.38629 0.01706 4.07982 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirteena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:57:46 2012 NSEQ 2 EFFN 2.000000 CKSUM 99869061 STATS LOCAL MSV -7.4759 0.72777 STATS LOCAL VITERBI -8.1308 0.72777 STATS LOCAL FORWARD -3.5939 0.72777 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29537 1.19288 1.50367 1.60672 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.53331 3.02441 0.20344 2.88069 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirteenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:57:54 2012 NSEQ 2 EFFN 2.000000 CKSUM 3873050328 STATS LOCAL MSV -7.5297 0.72801 STATS LOCAL VITERBI -8.2100 0.72801 STATS LOCAL FORWARD -3.3773 0.72801 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29291 1.29179 1.49882 1.48124 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirteenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:02 2012 NSEQ 3 EFFN 3.000000 CKSUM 2768605859 STATS LOCAL MSV -8.0306 0.72026 STATS LOCAL VITERBI -7.8201 0.72026 STATS LOCAL FORWARD -4.1363 0.72026 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28277 1.26352 1.52493 1.50310 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirteene_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:15 2012 NSEQ 4 EFFN 3.332031 CKSUM 3888805481 STATS LOCAL MSV -8.0259 0.71933 STATS LOCAL VITERBI -7.5825 0.71933 STATS LOCAL FORWARD -3.7267 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.12169 1.25795 1.51072 1.77619 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 * 1 3.43655 0.12980 3.48587 2.83150 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 2 0.14150 3.38325 2.80387 3.28520 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 3 0.14150 3.38325 2.80387 3.28520 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 4 3.43655 0.12980 3.48587 2.83150 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 5 2.94961 3.59079 0.11683 3.49577 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 6 0.14150 3.38325 2.80387 3.28520 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 7 3.43655 0.12980 3.48587 2.83150 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 8 3.43655 0.12980 3.48587 2.83150 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 9 3.09163 2.59706 3.13967 0.17819 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 10 3.43655 0.12980 3.48587 2.83150 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 11 0.14150 3.38325 2.80387 3.28520 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 12 2.94961 3.59079 0.11683 3.49577 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 13 0.14150 3.38325 2.80387 3.28520 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 14 2.94961 3.59079 0.11683 3.49577 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 15 3.43655 0.12980 3.48587 2.83150 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 16 0.14150 3.38325 2.80387 3.28520 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 17 2.94961 3.59079 0.11683 3.49577 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 18 2.94961 3.59079 0.11683 3.49577 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 19 3.43655 0.12980 3.48587 2.83150 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 20 2.94961 3.59079 0.11683 3.49577 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 21 0.14150 3.38325 2.80387 3.28520 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 22 2.94961 3.59079 0.11683 3.49577 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 23 0.14150 3.38325 2.80387 3.28520 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 24 3.43655 0.12980 3.48587 2.83150 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 25 3.09163 2.59706 3.13967 0.17819 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 26 0.14150 3.38325 2.80387 3.28520 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 27 3.43655 0.12980 3.48587 2.83150 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 28 3.43655 0.12980 3.48587 2.83150 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 29 3.43655 0.12980 3.48587 2.83150 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 30 0.40370 2.75421 1.63104 2.62041 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 31 3.43655 0.12980 3.48587 2.83150 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 32 3.09163 2.59706 3.13967 0.17819 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 33 2.94961 3.59079 0.11683 3.49577 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 34 0.14150 3.38325 2.80387 3.28520 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 35 0.14150 3.38325 2.80387 3.28520 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 36 2.59252 1.55117 2.65827 0.44146 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 37 3.09163 2.59706 3.13967 0.17819 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 38 3.09163 2.59706 3.13967 0.17819 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 39 0.14150 3.38325 2.80387 3.28520 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 40 0.14150 3.38325 2.80387 3.28520 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 41 2.94961 3.59079 0.11683 3.49577 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 42 3.43655 0.12980 3.48587 2.83150 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 43 0.14150 3.38325 2.80387 3.28520 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 44 3.09163 2.59706 3.13967 0.17819 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 45 0.14150 3.38325 2.80387 3.28520 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99490 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirteenf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:58:22 2012 NSEQ 30 EFFN 3.314209 CKSUM 3930340295 STATS LOCAL MSV -8.2137 0.71933 STATS LOCAL VITERBI -7.6701 0.71933 STATS LOCAL FORWARD -4.2107 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21644 1.32636 1.53322 1.50310 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 0.00000 * 1 0.14225 3.37755 2.80016 3.27895 1 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 2 3.08587 2.59340 3.13413 0.17912 2 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 3 3.42998 0.13058 3.47957 2.82672 3 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 4 3.42998 0.13058 3.47957 2.82672 4 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 5 2.94563 3.58500 0.11746 3.48938 5 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 6 0.14225 3.37755 2.80016 3.27895 6 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 7 3.42998 0.13058 3.47957 2.82672 7 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 8 3.42998 0.13058 3.47957 2.82672 8 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 9 3.08587 2.59340 3.13413 0.17912 9 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 10 3.42998 0.13058 3.47957 2.82672 10 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 11 0.14225 3.37755 2.80016 3.27895 11 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 12 2.94563 3.58500 0.11746 3.48938 12 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 13 0.14225 3.37755 2.80016 3.27895 13 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 14 3.08587 2.59340 3.13413 0.17912 14 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 15 3.42998 0.13058 3.47957 2.82672 15 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 16 2.94563 3.58500 0.11746 3.48938 16 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 17 2.66390 2.61000 0.21952 2.92094 17 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 18 0.14225 3.37755 2.80016 3.27895 18 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 19 3.42998 0.13058 3.47957 2.82672 19 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 20 2.94563 3.58500 0.11746 3.48938 20 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 21 0.14225 3.37755 2.80016 3.27895 21 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 22 2.94563 3.58500 0.11746 3.48938 22 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 23 0.14225 3.37755 2.80016 3.27895 23 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 24 3.08587 2.59340 3.13413 0.17912 24 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 25 3.08587 2.59340 3.13413 0.17912 25 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 26 0.14225 3.37755 2.80016 3.27895 26 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 27 3.42998 0.13058 3.47957 2.82672 27 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 28 3.07458 0.19377 2.84308 2.63525 28 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 29 3.42998 0.13058 3.47957 2.82672 29 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 30 2.94563 3.58500 0.11746 3.48938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 31 3.42998 0.13058 3.47957 2.82672 31 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 32 3.08587 2.59340 3.13413 0.17912 32 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 33 2.94563 3.58500 0.11746 3.48938 33 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 34 0.14225 3.37755 2.80016 3.27895 34 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 35 0.14225 3.37755 2.80016 3.27895 35 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 36 3.08587 2.59340 3.13413 0.17912 36 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 37 3.08587 2.59340 3.13413 0.17912 37 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 38 3.08587 2.59340 3.13413 0.17912 38 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 39 0.14225 3.37755 2.80016 3.27895 39 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 40 0.14225 3.37755 2.80016 3.27895 40 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 41 2.94563 3.58500 0.11746 3.48938 41 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 42 3.42998 0.13058 3.47957 2.82672 42 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 43 0.14225 3.37755 2.80016 3.27895 43 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 44 3.08587 2.59340 3.13413 0.17912 44 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.00991 4.00991 1.46634 0.26236 1.09861 0.40547 45 0.14225 3.37755 2.80016 3.27895 45 - - 1.38629 1.38629 1.38629 1.38629 0.01864 3.99161 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:15 2012 NSEQ 4 EFFN 3.660156 CKSUM 172308360 STATS LOCAL MSV -7.5788 0.71932 STATS LOCAL VITERBI -7.7425 0.71932 STATS LOCAL FORWARD -4.2739 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28564 1.28833 1.51910 1.47453 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 0.00000 * 1 3.19300 2.66139 3.23711 0.16273 1 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 2 3.19300 2.66139 3.23711 0.16273 2 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 3 3.19300 2.66139 3.23711 0.16273 3 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 4 2.46500 0.94717 2.53631 0.80297 4 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 5 3.01755 3.69041 0.10652 3.60597 5 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 6 0.12911 3.48247 2.86794 3.39398 6 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 7 3.55045 0.11705 3.59478 2.91367 7 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 8 3.55045 0.11705 3.59478 2.91367 8 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 9 3.19300 2.66139 3.23711 0.16273 9 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 10 3.01755 3.69041 0.10652 3.60597 10 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 11 0.12911 3.48247 2.86794 3.39398 11 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 12 0.12911 3.48247 2.86794 3.39398 12 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 13 3.55045 0.11705 3.59478 2.91367 13 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 14 3.19300 2.66139 3.23711 0.16273 14 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 15 3.55045 0.11705 3.59478 2.91367 15 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 16 0.12911 3.48247 2.86794 3.39398 16 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 17 3.01755 3.69041 0.10652 3.60597 17 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 18 0.96244 2.18570 2.20249 0.92858 18 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 19 3.55045 0.11705 3.59478 2.91367 19 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 20 3.01755 3.69041 0.10652 3.60597 20 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 21 0.96244 2.18570 2.20249 0.92858 21 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 22 3.01755 3.69041 0.10652 3.60597 22 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 23 0.12911 3.48247 2.86794 3.39398 23 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 24 3.01755 3.69041 0.10652 3.60597 24 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 25 3.55045 0.11705 3.59478 2.91367 25 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 26 0.12911 3.48247 2.86794 3.39398 26 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 27 3.55045 0.11705 3.59478 2.91367 27 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 28 3.55045 0.11705 3.59478 2.91367 28 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 29 3.55045 0.11705 3.59478 2.91367 29 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 30 3.01755 3.69041 0.10652 3.60597 30 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 31 3.55045 0.11705 3.59478 2.91367 31 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 32 3.19300 2.66139 3.23711 0.16273 32 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 33 3.01755 3.69041 0.10652 3.60597 33 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 34 0.12911 3.48247 2.86794 3.39398 34 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 35 0.12911 3.48247 2.86794 3.39398 35 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 36 3.55045 0.11705 3.59478 2.91367 36 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 37 3.19300 2.66139 3.23711 0.16273 37 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 38 3.19300 2.66139 3.23711 0.16273 38 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 39 0.12911 3.48247 2.86794 3.39398 39 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 40 0.12911 3.48247 2.86794 3.39398 40 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 41 3.01755 3.69041 0.10652 3.60597 41 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 42 3.55045 0.11705 3.59478 2.91367 42 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 43 0.12911 3.48247 2.86794 3.39398 43 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 44 3.19300 2.66139 3.23711 0.16273 44 - - 1.38629 1.38629 1.38629 1.38629 0.03472 4.07076 4.07076 1.46634 0.26236 1.09861 0.40547 45 0.12911 3.48247 2.86794 3.39398 45 - - 1.38629 1.38629 1.38629 1.38629 0.01751 4.05355 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyfivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:36:29 2012 NSEQ 2 EFFN 2.000000 CKSUM 2251262723 STATS LOCAL MSV -7.6478 0.72857 STATS LOCAL VITERBI -8.3386 0.72857 STATS LOCAL FORWARD -3.4900 0.72857 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22063 1.28733 1.53896 1.54017 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.92825 2.28391 0.95698 2.13014 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyfiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:36:36 2012 NSEQ 4 EFFN 3.324219 CKSUM 223359380 STATS LOCAL MSV -8.2434 0.71932 STATS LOCAL VITERBI -7.8397 0.71932 STATS LOCAL FORWARD -4.0517 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15527 1.22784 1.60527 1.65408 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 * 1 1.57609 0.55050 2.35295 2.10809 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 2 3.08911 2.59546 3.13724 0.17860 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 3 3.43368 0.13014 3.48311 2.82941 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 4 3.43368 0.13014 3.48311 2.82941 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 5 2.94787 3.58826 0.11710 3.49298 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 6 0.14183 3.38076 2.80224 3.28247 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 7 3.43368 0.13014 3.48311 2.82941 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 8 3.43368 0.13014 3.48311 2.82941 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 9 3.08911 2.59546 3.13724 0.17860 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 10 2.94787 3.58826 0.11710 3.49298 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 11 0.14183 3.38076 2.80224 3.28247 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 12 2.94787 3.58826 0.11710 3.49298 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 13 0.14183 3.38076 2.80224 3.28247 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 14 3.08911 2.59546 3.13724 0.17860 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 15 3.43368 0.13014 3.48311 2.82941 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 16 0.14183 3.38076 2.80224 3.28247 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 17 2.94787 3.58826 0.11710 3.49298 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 18 0.14183 3.38076 2.80224 3.28247 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 19 3.43368 0.13014 3.48311 2.82941 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 20 2.94787 3.58826 0.11710 3.49298 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 21 0.14183 3.38076 2.80224 3.28247 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 22 2.94787 3.58826 0.11710 3.49298 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 23 0.14183 3.38076 2.80224 3.28247 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 24 3.43368 0.13014 3.48311 2.82941 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 25 0.14183 3.38076 2.80224 3.28247 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 26 0.14183 3.38076 2.80224 3.28247 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 27 3.43368 0.13014 3.48311 2.82941 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 28 3.43368 0.13014 3.48311 2.82941 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 29 3.43368 0.13014 3.48311 2.82941 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 30 3.43368 0.13014 3.48311 2.82941 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 31 3.43368 0.13014 3.48311 2.82941 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 32 3.08911 2.59546 3.13724 0.17860 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 33 2.94787 3.58826 0.11710 3.49298 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 34 0.14183 3.38076 2.80224 3.28247 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 35 0.14183 3.38076 2.80224 3.28247 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 36 3.08911 2.59546 3.13724 0.17860 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 37 3.08911 2.59546 3.13724 0.17860 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 38 3.08911 2.59546 3.13724 0.17860 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 39 0.14183 3.38076 2.80224 3.28247 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 40 0.14183 3.38076 2.80224 3.28247 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 41 2.94787 3.58826 0.11710 3.49298 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 42 3.43368 0.13014 3.48311 2.82941 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 43 0.14183 3.38076 2.80224 3.28247 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 44 3.08911 2.59546 3.13724 0.17860 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 45 0.14183 3.38076 2.80224 3.28247 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99346 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyfivec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:36:40 2012 NSEQ 3 EFFN 3.000000 CKSUM 929202663 STATS LOCAL MSV -8.0030 0.72088 STATS LOCAL VITERBI -7.9152 0.72088 STATS LOCAL FORWARD -4.0145 0.72088 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27679 1.32055 1.55992 1.41088 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.10082 2.21882 0.69930 1.30206 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:02:10 2012 NSEQ 51 EFFN 4.622498 CKSUM 1752002484 STATS LOCAL MSV -6.8011 0.71932 STATS LOCAL VITERBI -7.5797 0.71932 STATS LOCAL FORWARD -4.2983 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19181 1.51829 1.65331 1.25236 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 0.00000 * 1 0.19872 3.21993 2.80686 2.52735 1 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 2 0.10412 3.71958 3.02068 3.65469 2 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 3 0.52708 2.23372 2.35113 1.57367 3 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 4 3.34764 0.19756 3.40023 2.20060 4 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 5 2.62740 0.91749 2.69659 0.77484 5 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 6 0.10412 3.71958 3.02068 3.65469 6 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 7 3.81741 0.09236 3.84929 3.10236 7 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 8 3.81741 0.09236 3.84929 3.10236 8 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 9 3.44540 2.82224 3.47956 0.13032 9 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 10 3.17260 3.92002 0.08641 3.86101 10 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 11 0.10412 3.71958 3.02068 3.65469 11 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 12 1.58081 3.03038 0.36961 2.90245 12 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 13 3.44540 2.82224 3.47956 0.13032 13 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 14 3.25099 2.29289 3.29505 0.19453 14 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 15 1.37291 2.90286 0.46354 2.76925 15 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 16 1.81501 0.76028 1.42571 2.04569 16 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 17 2.95426 3.45935 0.15725 2.78152 17 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 18 3.44540 2.82224 3.47956 0.13032 18 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 19 0.13688 3.59251 2.64970 3.51592 19 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 20 3.44540 2.82224 3.47956 0.13032 20 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 21 3.17260 3.92002 0.08641 3.86101 21 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 22 0.10412 3.71958 3.02068 3.65469 22 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 23 3.11442 1.99982 3.16489 0.25101 23 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 24 3.26990 2.33740 3.31303 0.18753 24 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 25 0.10412 3.71958 3.02068 3.65469 25 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 26 3.81741 0.09236 3.84929 3.10236 26 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 27 3.81741 0.09236 3.84929 3.10236 27 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 28 3.44540 2.82224 3.47956 0.13032 28 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 29 3.17260 3.92002 0.08641 3.86101 29 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 30 3.81741 0.09236 3.84929 3.10236 30 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 31 3.03541 1.84690 3.08928 0.28944 31 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 32 3.17260 3.92002 0.08641 3.86101 32 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 33 0.10412 3.71958 3.02068 3.65469 33 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 34 0.10412 3.71958 3.02068 3.65469 34 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 35 3.81741 0.09236 3.84929 3.10236 35 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 36 3.44540 2.82224 3.47956 0.13032 36 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 37 3.44540 2.82224 3.47956 0.13032 37 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 38 0.10412 3.71958 3.02068 3.65469 38 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 39 0.10412 3.71958 3.02068 3.65469 39 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 40 3.17260 3.92002 0.08641 3.86101 40 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 41 3.81741 0.09236 3.84929 3.10236 41 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 42 0.10412 3.71958 3.02068 3.65469 42 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 43 3.44540 2.82224 3.47956 0.13032 43 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 44 0.10412 3.71958 3.02068 3.65469 44 - - 1.38629 1.38629 1.38629 1.38629 0.02975 4.22281 4.22281 1.46634 0.26236 1.09861 0.40547 45 3.44540 2.82224 3.47956 0.13032 45 - - 1.38629 1.38629 1.38629 1.38629 0.01499 4.20804 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:37:02 2012 NSEQ 3 EFFN 3.000000 CKSUM 2809097426 STATS LOCAL MSV -8.0435 0.72039 STATS LOCAL VITERBI -7.7252 0.72039 STATS LOCAL FORWARD -4.0959 0.72039 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40570 1.19945 1.38115 1.59871 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.43088 1.34923 2.50068 0.56112 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:36:51 2012 NSEQ 2 EFFN 2.000000 CKSUM 2235696670 STATS LOCAL MSV -7.6354 0.72842 STATS LOCAL VITERBI -8.1785 0.72842 STATS LOCAL FORWARD -3.4467 0.72842 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23700 1.38378 1.42713 1.51815 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.15554 1.00938 2.23102 0.88601 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 29 11:36:15 2012 NSEQ 3 EFFN 3.000000 CKSUM 958365841 STATS LOCAL MSV -7.9809 0.72073 STATS LOCAL VITERBI -7.8947 0.72073 STATS LOCAL FORWARD -4.3469 0.72073 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33797 1.26045 1.48365 1.48154 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.10082 2.21882 0.69930 1.30206 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:02:19 2012 NSEQ 21 EFFN 3.776001 CKSUM 3781066606 STATS LOCAL MSV -7.4789 0.71932 STATS LOCAL VITERBI -7.7461 0.71932 STATS LOCAL FORWARD -4.0252 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21030 1.50966 1.52784 1.33217 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 0.00000 * 1 3.04959 0.25511 3.11054 2.01578 1 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 2 3.03936 3.72263 0.10341 3.64171 2 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 3 3.22677 2.68279 3.26956 0.15792 3 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 4 3.03936 3.72263 0.10341 3.64171 4 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 5 3.22677 2.68279 3.26956 0.15792 5 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 6 0.12532 3.51501 2.88885 3.42972 6 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 7 3.22677 2.68279 3.26956 0.15792 7 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 8 3.58758 0.11320 3.63024 2.94018 8 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 9 3.22677 2.68279 3.26956 0.15792 9 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 10 3.03936 3.72263 0.10341 3.64171 10 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 11 0.12532 3.51501 2.88885 3.42972 11 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 12 0.12532 3.51501 2.88885 3.42972 12 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 13 0.26222 2.34874 2.60935 2.78736 13 - - 1.38629 1.38629 1.38629 1.38629 0.13370 4.09034 2.22184 1.46634 0.26236 1.09861 0.40547 14 3.05768 2.57545 3.10701 0.18374 14 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99418 3.99418 1.46634 0.26236 0.26904 1.44439 15 3.58758 0.11320 3.63024 2.94018 15 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 16 0.12532 3.51501 2.88885 3.42972 16 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 17 0.12532 3.51501 2.88885 3.42972 17 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 18 3.03936 3.72263 0.10341 3.64171 18 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 19 3.22677 2.68279 3.26956 0.15792 19 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 20 3.03936 3.72263 0.10341 3.64171 20 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 21 3.22677 2.68279 3.26956 0.15792 21 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 22 3.03936 3.72263 0.10341 3.64171 22 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 23 0.19599 3.15137 2.72843 2.66121 23 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 24 2.05503 1.13744 1.58476 1.06052 24 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 25 2.03102 2.66968 0.38075 2.15267 25 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 26 0.12532 3.51501 2.88885 3.42972 26 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 27 3.58758 0.11320 3.63024 2.94018 27 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 28 3.58758 0.11320 3.63024 2.94018 28 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 29 3.58758 0.11320 3.63024 2.94018 29 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 30 3.58758 0.11320 3.63024 2.94018 30 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 31 3.58758 0.11320 3.63024 2.94018 31 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 32 3.22677 2.68279 3.26956 0.15792 32 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 33 3.03936 3.72263 0.10341 3.64171 33 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 34 0.12532 3.51501 2.88885 3.42972 34 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 35 0.12532 3.51501 2.88885 3.42972 35 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 36 3.22677 2.68279 3.26956 0.15792 36 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 37 3.22677 2.68279 3.26956 0.15792 37 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 38 3.22677 2.68279 3.26956 0.15792 38 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 39 0.12532 3.51501 2.88885 3.42972 39 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 40 0.12532 3.51501 2.88885 3.42972 40 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 41 3.03936 3.72263 0.10341 3.64171 41 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 42 3.58758 0.11320 3.63024 2.94018 42 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 43 0.12532 3.51501 2.88885 3.42972 43 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 44 3.22677 2.68279 3.26956 0.15792 44 - - 1.38629 1.38629 1.38629 1.38629 0.03404 4.09034 4.09034 1.46634 0.26236 1.09861 0.40547 45 0.12532 3.51501 2.88885 3.42972 45 - - 1.38629 1.38629 1.38629 1.38629 0.01716 4.07346 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:49:43 2012 NSEQ 10 EFFN 3.334961 CKSUM 2758523613 STATS LOCAL MSV -8.2143 0.71933 STATS LOCAL VITERBI -7.5430 0.71933 STATS LOCAL FORWARD -3.9363 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23872 1.25886 1.59600 1.49807 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 * 1 3.09257 2.59766 3.14057 0.17804 1 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 2 3.43763 0.12967 3.48690 2.83229 2 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 3 3.09257 2.59766 3.14057 0.17804 3 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 4 3.43763 0.12967 3.48690 2.83229 4 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 5 2.95026 3.59174 0.11672 3.49682 5 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 6 0.14138 3.38419 2.80447 3.28622 6 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 7 3.43763 0.12967 3.48690 2.83229 7 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 8 3.43763 0.12967 3.48690 2.83229 8 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 9 3.09257 2.59766 3.14057 0.17804 9 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 10 3.43763 0.12967 3.48690 2.83229 10 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 11 0.14138 3.38419 2.80447 3.28622 11 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 12 2.95026 3.59174 0.11672 3.49682 12 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 13 0.14138 3.38419 2.80447 3.28622 13 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 14 3.09257 2.59766 3.14057 0.17804 14 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 15 3.43763 0.12967 3.48690 2.83229 15 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 16 0.14138 3.38419 2.80447 3.28622 16 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 17 2.95026 3.59174 0.11672 3.49682 17 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 18 0.46629 2.68077 1.48912 2.54345 18 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 19 3.43763 0.12967 3.48690 2.83229 19 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 20 0.14138 3.38419 2.80447 3.28622 20 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 21 0.14138 3.38419 2.80447 3.28622 21 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 22 2.95026 3.59174 0.11672 3.49682 22 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 23 2.95026 3.59174 0.11672 3.49682 23 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 24 3.43763 0.12967 3.48690 2.83229 24 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 25 3.09257 2.59766 3.14057 0.17804 25 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 26 0.14138 3.38419 2.80447 3.28622 26 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 27 3.43763 0.12967 3.48690 2.83229 27 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 28 3.43763 0.12967 3.48690 2.83229 28 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 29 3.43763 0.12967 3.48690 2.83229 29 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 30 2.95026 3.59174 0.11672 3.49682 30 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 31 3.43763 0.12967 3.48690 2.83229 31 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 32 3.09257 2.59766 3.14057 0.17804 32 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 33 2.95026 3.59174 0.11672 3.49682 33 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 34 0.14138 3.38419 2.80447 3.28622 34 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 35 0.14138 3.38419 2.80447 3.28622 35 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 36 3.09257 2.59766 3.14057 0.17804 36 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 37 3.09257 2.59766 3.14057 0.17804 37 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 38 3.09257 2.59766 3.14057 0.17804 38 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 39 0.14138 3.38419 2.80447 3.28622 39 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 40 0.14138 3.38419 2.80447 3.28622 40 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 41 2.95026 3.59174 0.11672 3.49682 41 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 42 3.43763 0.12967 3.48690 2.83229 42 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 43 0.14138 3.38419 2.80447 3.28622 43 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 44 3.09257 2.59766 3.14057 0.17804 44 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 45 0.14138 3.38419 2.80447 3.28622 45 - - 1.38629 1.38629 1.38629 1.38629 0.01857 3.99544 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:57:34 2012 NSEQ 3 EFFN 3.000000 CKSUM 869730097 STATS LOCAL MSV -8.0534 0.72127 STATS LOCAL VITERBI -7.7876 0.72127 STATS LOCAL FORWARD -3.9200 0.72127 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20477 1.36989 1.62908 1.38632 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 1.33622 2.58417 0.55423 2.43967 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.42752 1.34012 2.49742 0.56628 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.86982 3.47591 0.13017 3.36931 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:59:47 2012 NSEQ 10 EFFN 3.637695 CKSUM 2656717971 STATS LOCAL MSV -7.6590 0.71931 STATS LOCAL VITERBI -7.6396 0.71931 STATS LOCAL FORWARD -4.2587 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26274 1.30948 1.45746 1.54022 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 0.00000 * 1 2.56791 0.56820 2.63886 1.25414 1 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 2 2.21210 0.29506 2.81793 2.44976 2 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 3 3.18633 2.65716 3.23071 0.16370 3 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 4 3.01320 3.68399 0.10715 3.59886 4 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 5 0.12988 3.47601 2.86379 3.38690 5 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 6 0.12988 3.47601 2.86379 3.38690 6 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 7 2.76060 0.38841 2.82828 1.61194 7 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 8 3.54307 0.11783 3.58773 2.90838 8 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 9 3.18633 2.65716 3.23071 0.16370 9 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 10 3.54307 0.11783 3.58773 2.90838 10 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 11 0.12988 3.47601 2.86379 3.38690 11 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 12 3.01320 3.68399 0.10715 3.59886 12 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 13 0.12988 3.47601 2.86379 3.38690 13 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 14 3.18633 2.65716 3.23071 0.16370 14 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 15 3.54307 0.11783 3.58773 2.90838 15 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 16 0.12988 3.47601 2.86379 3.38690 16 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 17 3.01320 3.68399 0.10715 3.59886 17 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 18 3.01320 3.68399 0.10715 3.59886 18 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 19 3.54307 0.11783 3.58773 2.90838 19 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 20 3.01320 3.68399 0.10715 3.59886 20 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 21 1.76831 2.95823 0.33081 2.82808 21 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 22 3.01320 3.68399 0.10715 3.59886 22 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 23 0.23339 3.13290 2.15597 3.02062 23 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 24 3.18633 2.65716 3.23071 0.16370 24 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 25 3.54307 0.11783 3.58773 2.90838 25 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 26 0.12988 3.47601 2.86379 3.38690 26 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 27 3.54307 0.11783 3.58773 2.90838 27 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 28 3.54307 0.11783 3.58773 2.90838 28 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 29 3.54307 0.11783 3.58773 2.90838 29 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 30 3.01320 3.68399 0.10715 3.59886 30 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 31 3.54307 0.11783 3.58773 2.90838 31 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 32 3.18633 2.65716 3.23071 0.16370 32 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 33 3.01320 3.68399 0.10715 3.59886 33 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 34 0.12988 3.47601 2.86379 3.38690 34 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 35 0.12988 3.47601 2.86379 3.38690 35 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 36 3.18633 2.65716 3.23071 0.16370 36 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 37 3.18633 2.65716 3.23071 0.16370 37 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 38 3.18633 2.65716 3.23071 0.16370 38 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 39 0.12988 3.47601 2.86379 3.38690 39 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 40 0.12988 3.47601 2.86379 3.38690 40 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 41 3.01320 3.68399 0.10715 3.59886 41 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 42 3.54307 0.11783 3.58773 2.90838 42 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 43 0.12988 3.47601 2.86379 3.38690 43 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 44 3.18633 2.65716 3.23071 0.16370 44 - - 1.38629 1.38629 1.38629 1.38629 0.03486 4.06692 4.06692 1.46634 0.26236 1.09861 0.40547 45 0.12988 3.47601 2.86379 3.38690 45 - - 1.38629 1.38629 1.38629 1.38629 0.01758 4.04964 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:50 2012 NSEQ 5 EFFN 3.168945 CKSUM 1327797524 STATS LOCAL MSV -8.0678 0.71932 STATS LOCAL VITERBI -7.6682 0.71932 STATS LOCAL FORWARD -3.5455 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.41226 1.10325 1.45485 1.65452 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 * 1 2.91196 3.53626 0.12295 3.43565 1 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 2 3.03791 2.56284 3.08799 0.18707 2 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 3 3.37482 0.13738 3.42671 2.78637 3 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 4 2.91196 3.53626 0.12295 3.43565 4 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 5 2.91196 3.53626 0.12295 3.43565 5 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 6 0.14875 3.32976 2.76899 3.22669 6 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 7 3.37482 0.13738 3.42671 2.78637 7 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 8 3.37482 0.13738 3.42671 2.78637 8 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 9 3.03791 2.56284 3.08799 0.18707 9 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 10 3.37482 0.13738 3.42671 2.78637 10 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 11 2.91196 3.53626 0.12295 3.43565 11 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 12 2.91196 3.53626 0.12295 3.43565 12 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 13 3.37482 0.13738 3.42671 2.78637 13 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 14 3.03791 2.56284 3.08799 0.18707 14 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 15 3.37482 0.13738 3.42671 2.78637 15 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 16 0.14875 3.32976 2.76899 3.22669 16 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 17 2.91196 3.53626 0.12295 3.43565 17 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 18 3.37482 0.13738 3.42671 2.78637 18 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 19 3.37482 0.13738 3.42671 2.78637 19 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 20 3.03791 2.56284 3.08799 0.18707 20 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 21 0.14875 3.32976 2.76899 3.22669 21 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 22 2.91196 3.53626 0.12295 3.43565 22 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 23 0.14875 3.32976 2.76899 3.22669 23 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 24 3.03791 2.56284 3.08799 0.18707 24 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 25 3.37482 0.13738 3.42671 2.78637 25 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 26 0.14875 3.32976 2.76899 3.22669 26 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 27 3.37482 0.13738 3.42671 2.78637 27 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 28 3.37482 0.13738 3.42671 2.78637 28 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 29 3.37482 0.13738 3.42671 2.78637 29 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 30 2.91196 3.53626 0.12295 3.43565 30 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 31 3.37482 0.13738 3.42671 2.78637 31 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 32 3.37482 0.13738 3.42671 2.78637 32 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 33 2.91196 3.53626 0.12295 3.43565 33 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 34 0.14875 3.32976 2.76899 3.22669 34 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 35 0.14875 3.32976 2.76899 3.22669 35 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 36 3.37482 0.13738 3.42671 2.78637 36 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 37 3.03791 2.56284 3.08799 0.18707 37 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 38 3.03791 2.56284 3.08799 0.18707 38 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 39 0.14875 3.32976 2.76899 3.22669 39 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 40 0.14875 3.32976 2.76899 3.22669 40 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 41 2.91196 3.53626 0.12295 3.43565 41 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 42 3.37482 0.13738 3.42671 2.78637 42 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 43 0.14875 3.32976 2.76899 3.22669 43 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 44 3.03791 2.56284 3.08799 0.18707 44 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 45 0.14875 3.32976 2.76899 3.22669 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96442 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:27 2012 NSEQ 3 EFFN 3.000000 CKSUM 493454044 STATS LOCAL MSV -8.0345 0.72034 STATS LOCAL VITERBI -7.7520 0.72034 STATS LOCAL FORWARD -3.8814 0.72034 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22178 1.46087 1.44289 1.43963 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:19 2012 NSEQ 3 EFFN 3.000000 CKSUM 4113701339 STATS LOCAL MSV -7.8908 0.72186 STATS LOCAL VITERBI -7.6156 0.72186 STATS LOCAL FORWARD -3.7494 0.72186 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26577 1.40539 1.50943 1.37963 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.42422 1.33104 2.49423 0.57148 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.09338 1.42206 0.67619 2.06387 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.09338 1.42206 0.67619 2.06387 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:59 2012 NSEQ 4 EFFN 3.285156 CKSUM 405185964 STATS LOCAL MSV -8.2383 0.71933 STATS LOCAL VITERBI -7.6565 0.71933 STATS LOCAL FORWARD -4.0319 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11058 1.38892 1.69564 1.43631 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 * 1 0.14350 3.36817 2.79406 3.26870 1 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 2 3.41917 0.13188 3.46922 2.81884 2 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 3 3.07642 2.58739 3.12504 0.18065 3 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 4 0.14350 3.36817 2.79406 3.26870 4 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 5 2.93908 3.57547 0.11851 3.47887 5 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 6 0.14350 3.36817 2.79406 3.26870 6 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 7 3.41917 0.13188 3.46922 2.81884 7 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 8 3.41917 0.13188 3.46922 2.81884 8 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 9 3.07642 2.58739 3.12504 0.18065 9 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 10 3.41917 0.13188 3.46922 2.81884 10 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 11 0.14350 3.36817 2.79406 3.26870 11 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 12 0.14350 3.36817 2.79406 3.26870 12 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 13 3.07642 2.58739 3.12504 0.18065 13 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 14 3.07642 2.58739 3.12504 0.18065 14 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 15 3.07642 2.58739 3.12504 0.18065 15 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 16 2.93908 3.57547 0.11851 3.47887 16 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 17 0.14350 3.36817 2.79406 3.26870 17 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 18 2.93908 3.57547 0.11851 3.47887 18 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 19 3.41917 0.13188 3.46922 2.81884 19 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 20 0.14350 3.36817 2.79406 3.26870 20 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 21 0.14350 3.36817 2.79406 3.26870 21 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 22 2.93908 3.57547 0.11851 3.47887 22 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 23 0.14350 3.36817 2.79406 3.26870 23 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 24 3.07642 2.58739 3.12504 0.18065 24 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 25 3.07642 2.58739 3.12504 0.18065 25 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 26 0.14350 3.36817 2.79406 3.26870 26 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 27 3.41917 0.13188 3.46922 2.81884 27 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 28 3.41917 0.13188 3.46922 2.81884 28 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 29 3.41917 0.13188 3.46922 2.81884 29 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 30 2.93908 3.57547 0.11851 3.47887 30 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 31 3.41917 0.13188 3.46922 2.81884 31 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 32 3.07642 2.58739 3.12504 0.18065 32 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 33 2.93908 3.57547 0.11851 3.47887 33 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 34 0.14350 3.36817 2.79406 3.26870 34 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 35 0.14350 3.36817 2.79406 3.26870 35 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 36 3.41917 0.13188 3.46922 2.81884 36 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 37 3.07642 2.58739 3.12504 0.18065 37 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 38 3.07642 2.58739 3.12504 0.18065 38 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 39 0.14350 3.36817 2.79406 3.26870 39 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 40 0.14350 3.36817 2.79406 3.26870 40 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 41 2.93908 3.57547 0.11851 3.47887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 42 3.41917 0.13188 3.46922 2.81884 42 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 43 0.14350 3.36817 2.79406 3.26870 43 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 44 3.07642 2.58739 3.12504 0.18065 44 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 45 0.14350 3.36817 2.79406 3.26870 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:59:57 2012 NSEQ 3 EFFN 3.000000 CKSUM 1175917883 STATS LOCAL MSV -7.9911 0.72114 STATS LOCAL VITERBI -7.8834 0.72114 STATS LOCAL FORWARD -3.9581 0.72114 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20657 1.30856 1.59272 1.48194 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 1.32055 2.11354 2.18868 0.69287 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.43258 1.35379 2.50233 0.55855 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:03 2012 NSEQ 7 EFFN 3.257324 CKSUM 2198767491 STATS LOCAL MSV -8.1040 0.71931 STATS LOCAL VITERBI -7.7630 0.71931 STATS LOCAL FORWARD -4.1651 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27979 1.32449 1.52710 1.43213 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 0.00000 * 1 3.06731 2.58158 3.11627 0.18215 1 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 2 3.06731 2.58158 3.11627 0.18215 2 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 3 2.93271 3.56625 0.11954 3.46869 3 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 4 3.06731 2.58158 3.11627 0.18215 4 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 5 2.93271 3.56625 0.11954 3.46869 5 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 6 0.14472 3.35911 2.78816 3.25878 6 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 7 3.40872 0.13316 3.45920 2.81121 7 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 8 3.40872 0.13316 3.45920 2.81121 8 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 9 3.06731 2.58158 3.11627 0.18215 9 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 10 2.93271 3.56625 0.11954 3.46869 10 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 11 0.14472 3.35911 2.78816 3.25878 11 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 12 0.14472 3.35911 2.78816 3.25878 12 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 13 3.40872 0.13316 3.45920 2.81121 13 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 14 3.06731 2.58158 3.11627 0.18215 14 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 15 3.40872 0.13316 3.45920 2.81121 15 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 16 0.14472 3.35911 2.78816 3.25878 16 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 17 2.93271 3.56625 0.11954 3.46869 17 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 18 0.14472 3.35911 2.78816 3.25878 18 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 19 3.40872 0.13316 3.45920 2.81121 19 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 20 2.93271 3.56625 0.11954 3.46869 20 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 21 3.06731 2.58158 3.11627 0.18215 21 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 22 2.93271 3.56625 0.11954 3.46869 22 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 23 0.14472 3.35911 2.78816 3.25878 23 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 24 3.06731 2.58158 3.11627 0.18215 24 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 25 3.40872 0.13316 3.45920 2.81121 25 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 26 0.14472 3.35911 2.78816 3.25878 26 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 27 3.40872 0.13316 3.45920 2.81121 27 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 28 3.40872 0.13316 3.45920 2.81121 28 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 29 3.40872 0.13316 3.45920 2.81121 29 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 30 2.93271 3.56625 0.11954 3.46869 30 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 31 3.40872 0.13316 3.45920 2.81121 31 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 32 3.06731 2.58158 3.11627 0.18215 32 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 33 2.93271 3.56625 0.11954 3.46869 33 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 34 0.14472 3.35911 2.78816 3.25878 34 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 35 0.14472 3.35911 2.78816 3.25878 35 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 36 3.40872 0.13316 3.45920 2.81121 36 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 37 3.06731 2.58158 3.11627 0.18215 37 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 38 3.06731 2.58158 3.11627 0.18215 38 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 39 0.14472 3.35911 2.78816 3.25878 39 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 40 0.14472 3.35911 2.78816 3.25878 40 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 41 2.93271 3.56625 0.11954 3.46869 41 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 42 3.40872 0.13316 3.45920 2.81121 42 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 43 0.14472 3.35911 2.78816 3.25878 43 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 44 3.06731 2.58158 3.11627 0.18215 44 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99954 3.99954 1.46634 0.26236 1.09861 0.40547 45 0.14472 3.35911 2.78816 3.25878 45 - - 1.38629 1.38629 1.38629 1.38629 0.01884 3.98105 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyonec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:09 2012 NSEQ 2 EFFN 2.000000 CKSUM 3822712959 STATS LOCAL MSV -7.4025 0.72799 STATS LOCAL VITERBI -8.2146 0.72799 STATS LOCAL FORWARD -3.4594 0.72799 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19201 1.29229 1.56685 1.54625 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyoned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:15 2012 NSEQ 2 EFFN 2.000000 CKSUM 3101498025 STATS LOCAL MSV -7.4383 0.72813 STATS LOCAL VITERBI -8.3384 0.72813 STATS LOCAL FORWARD -3.5719 0.72813 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29173 1.34298 1.49938 1.42350 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyonee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:22 2012 NSEQ 2 EFFN 2.000000 CKSUM 1082780720 STATS LOCAL MSV -7.4819 0.72804 STATS LOCAL VITERBI -8.3452 0.72804 STATS LOCAL FORWARD -3.6247 0.72804 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34479 1.34306 1.43607 1.42505 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyonef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:27 2012 NSEQ 2 EFFN 2.000000 CKSUM 4075013726 STATS LOCAL MSV -7.4346 0.72876 STATS LOCAL VITERBI -8.2677 0.72876 STATS LOCAL FORWARD -3.2579 0.72876 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14531 1.27034 1.71538 1.50850 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.15554 1.00938 2.23102 0.88601 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyoneg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:33 2012 NSEQ 2 EFFN 2.000000 CKSUM 1499303294 STATS LOCAL MSV -7.4468 0.72832 STATS LOCAL VITERBI -8.1792 0.72832 STATS LOCAL FORWARD -3.7559 0.72832 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34665 1.28182 1.57176 1.36775 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyoneh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:00:55 2012 NSEQ 17 EFFN 3.490479 CKSUM 2048180296 STATS LOCAL MSV -7.4432 0.71933 STATS LOCAL VITERBI -7.7454 0.71933 STATS LOCAL FORWARD -4.3181 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.35818 1.20843 1.44293 1.57036 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 0.00000 * 1 2.86208 2.00642 2.91898 0.28184 1 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 2 3.49321 0.12326 3.54008 2.87255 2 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 3 3.49321 0.12326 3.54008 2.87255 3 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 4 3.49321 0.12326 3.54008 2.87255 4 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 5 2.24900 3.24331 0.20866 3.12836 5 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 6 0.54374 2.63770 1.32553 2.49810 6 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 7 3.49321 0.12326 3.54008 2.87255 7 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 8 3.49321 0.12326 3.54008 2.87255 8 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 9 3.14166 2.62884 3.18778 0.17036 9 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 10 3.49321 0.12326 3.54008 2.87255 10 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 11 2.98363 3.64050 0.11155 3.55071 11 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 12 2.98363 3.64050 0.11155 3.55071 12 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 13 0.13519 3.43251 2.83575 3.33917 13 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 14 3.14166 2.62884 3.18778 0.17036 14 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 15 3.04000 0.24307 3.10105 2.09603 15 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 16 0.13519 3.43251 2.83575 3.33917 16 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 17 2.98363 3.64050 0.11155 3.55071 17 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 18 2.98363 3.64050 0.11155 3.55071 18 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 19 3.03719 0.24407 3.09832 2.09172 19 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 20 2.98363 3.64050 0.11155 3.55071 20 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 21 3.14166 2.62884 3.18778 0.17036 21 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 22 2.98363 3.64050 0.11155 3.55071 22 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 23 0.13519 3.43251 2.83575 3.33917 23 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 24 0.13519 3.43251 2.83575 3.33917 24 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 25 3.14166 2.62884 3.18778 0.17036 25 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 26 0.13519 3.43251 2.83575 3.33917 26 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 27 3.49321 0.12326 3.54008 2.87255 27 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 28 3.49321 0.12326 3.54008 2.87255 28 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 29 3.49321 0.12326 3.54008 2.87255 29 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 30 2.98363 3.64050 0.11155 3.55071 30 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 31 3.49321 0.12326 3.54008 2.87255 31 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 32 3.14166 2.62884 3.18778 0.17036 32 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 33 2.98363 3.64050 0.11155 3.55071 33 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 34 0.13519 3.43251 2.83575 3.33917 34 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 35 0.13519 3.43251 2.83575 3.33917 35 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 36 3.49321 0.12326 3.54008 2.87255 36 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 37 3.14166 2.62884 3.18778 0.17036 37 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 38 3.14166 2.62884 3.18778 0.17036 38 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 39 0.13519 3.43251 2.83575 3.33917 39 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 40 0.13519 3.43251 2.83575 3.33917 40 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 41 2.98363 3.64050 0.11155 3.55071 41 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 42 3.49321 0.12326 3.54008 2.87255 42 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 43 0.13519 3.43251 2.83575 3.33917 43 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 44 3.14166 2.62884 3.18778 0.17036 44 - - 1.38629 1.38629 1.38629 1.38629 0.03578 4.04138 4.04138 1.46634 0.26236 1.09861 0.40547 45 0.13519 3.43251 2.83575 3.33917 45 - - 1.38629 1.38629 1.38629 1.38629 0.01805 4.02365 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:42 2012 NSEQ 25 EFFN 3.604126 CKSUM 615754615 STATS LOCAL MSV -7.7339 0.71932 STATS LOCAL VITERBI -7.5405 0.71932 STATS LOCAL FORWARD -4.1531 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19991 1.44050 1.62854 1.32518 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 0.00000 * 1 1.52004 2.24459 2.37189 0.54125 1 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 2 3.00662 3.67429 0.10812 3.58812 2 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 3 3.17630 2.65080 3.22106 0.16517 3 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 4 0.13104 3.46628 2.85752 3.37621 4 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 5 3.00662 3.67429 0.10812 3.58812 5 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 6 3.00662 3.67429 0.10812 3.58812 6 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 7 3.53193 0.11902 3.57709 2.90040 7 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 8 3.53193 0.11902 3.57709 2.90040 8 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 9 3.17630 2.65080 3.22106 0.16517 9 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 10 3.53193 0.11902 3.57709 2.90040 10 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 11 0.13104 3.46628 2.85752 3.37621 11 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 12 0.13104 3.46628 2.85752 3.37621 12 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 13 0.19070 2.81213 2.72186 3.04092 13 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 14 3.17630 2.65080 3.22106 0.16517 14 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 15 0.13104 3.46628 2.85752 3.37621 15 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 16 0.13104 3.46628 2.85752 3.37621 16 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 17 3.17630 2.65080 3.22106 0.16517 17 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 18 3.00662 3.67429 0.10812 3.58812 18 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 19 3.17630 2.65080 3.22106 0.16517 19 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 20 3.00662 3.67429 0.10812 3.58812 20 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 21 3.17630 2.65080 3.22106 0.16517 21 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 22 3.00662 3.67429 0.10812 3.58812 22 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 23 0.13104 3.46628 2.85752 3.37621 23 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 24 3.53193 0.11902 3.57709 2.90040 24 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 25 3.17630 2.65080 3.22106 0.16517 25 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 26 0.13104 3.46628 2.85752 3.37621 26 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 27 3.53193 0.11902 3.57709 2.90040 27 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 28 3.53193 0.11902 3.57709 2.90040 28 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 29 3.53193 0.11902 3.57709 2.90040 29 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 30 3.53193 0.11902 3.57709 2.90040 30 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 31 3.53193 0.11902 3.57709 2.90040 31 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 32 3.17630 2.65080 3.22106 0.16517 32 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 33 0.13104 3.46628 2.85752 3.37621 33 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 34 0.13104 3.46628 2.85752 3.37621 34 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 35 0.13104 3.46628 2.85752 3.37621 35 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 36 2.95192 2.13272 3.00566 0.24880 36 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 37 3.17630 2.65080 3.22106 0.16517 37 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 38 3.17630 2.65080 3.22106 0.16517 38 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 39 0.13104 3.46628 2.85752 3.37621 39 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 40 0.13104 3.46628 2.85752 3.37621 40 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 41 3.00662 3.67429 0.10812 3.58812 41 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 42 3.53193 0.11902 3.57709 2.90040 42 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 43 0.13104 3.46628 2.85752 3.37621 43 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 44 3.17630 2.65080 3.22106 0.16517 44 - - 1.38629 1.38629 1.38629 1.38629 0.03507 4.06115 4.06115 1.46634 0.26236 1.09861 0.40547 45 1.94400 2.29353 0.39444 2.50223 45 - - 1.38629 1.38629 1.38629 1.38629 0.01769 4.04378 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:34 2012 NSEQ 3 EFFN 3.000000 CKSUM 1148524890 STATS LOCAL MSV -8.0380 0.72036 STATS LOCAL VITERBI -7.7395 0.72036 STATS LOCAL FORWARD -3.7355 0.72036 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33949 1.45941 1.37656 1.37357 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:11 2012 NSEQ 8 EFFN 3.285156 CKSUM 2607871508 STATS LOCAL MSV -8.2251 0.71933 STATS LOCAL VITERBI -7.5953 0.71933 STATS LOCAL FORWARD -4.0932 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16481 1.25871 1.80031 1.43234 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 0.00000 * 1 0.14350 3.36817 2.79406 3.26870 1 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 2 3.41917 0.13188 3.46922 2.81884 2 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 3 0.14350 3.36817 2.79406 3.26870 3 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 4 3.07642 2.58739 3.12504 0.18065 4 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 5 0.14350 3.36817 2.79406 3.26870 5 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 6 2.93908 3.57547 0.11851 3.47887 6 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 7 3.41917 0.13188 3.46922 2.81884 7 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 8 3.41917 0.13188 3.46922 2.81884 8 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 9 3.07642 2.58739 3.12504 0.18065 9 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 10 3.41917 0.13188 3.46922 2.81884 10 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 11 0.14350 3.36817 2.79406 3.26870 11 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 12 0.14350 3.36817 2.79406 3.26870 12 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 13 3.41917 0.13188 3.46922 2.81884 13 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 14 3.07642 2.58739 3.12504 0.18065 14 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 15 3.41917 0.13188 3.46922 2.81884 15 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 16 0.14350 3.36817 2.79406 3.26870 16 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 17 3.07642 2.58739 3.12504 0.18065 17 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 18 2.93908 3.57547 0.11851 3.47887 18 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 19 3.07642 2.58739 3.12504 0.18065 19 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 20 2.93908 3.57547 0.11851 3.47887 20 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 21 0.14350 3.36817 2.79406 3.26870 21 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 22 2.93908 3.57547 0.11851 3.47887 22 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 23 0.14350 3.36817 2.79406 3.26870 23 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 24 3.41917 0.13188 3.46922 2.81884 24 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 25 3.07642 2.58739 3.12504 0.18065 25 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 26 0.14350 3.36817 2.79406 3.26870 26 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 27 3.41917 0.13188 3.46922 2.81884 27 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 28 3.41917 0.13188 3.46922 2.81884 28 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 29 3.41917 0.13188 3.46922 2.81884 29 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 30 3.41917 0.13188 3.46922 2.81884 30 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 31 3.41917 0.13188 3.46922 2.81884 31 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 32 3.07642 2.58739 3.12504 0.18065 32 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 33 2.93908 3.57547 0.11851 3.47887 33 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 34 0.14350 3.36817 2.79406 3.26870 34 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 35 0.14350 3.36817 2.79406 3.26870 35 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 36 3.07642 2.58739 3.12504 0.18065 36 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 37 3.07642 2.58739 3.12504 0.18065 37 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 38 3.07642 2.58739 3.12504 0.18065 38 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 39 0.14350 3.36817 2.79406 3.26870 39 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 40 0.14350 3.36817 2.79406 3.26870 40 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 41 2.93908 3.57547 0.11851 3.47887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 42 3.41917 0.13188 3.46922 2.81884 42 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 43 0.14350 3.36817 2.79406 3.26870 43 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 44 3.07642 2.58739 3.12504 0.18065 44 - - 1.38629 1.38629 1.38629 1.38629 0.03714 4.00463 4.00463 1.46634 0.26236 1.09861 0.40547 45 0.14350 3.36817 2.79406 3.26870 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98623 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 23:01:03 2012 NSEQ 5 EFFN 3.559570 CKSUM 3915778671 STATS LOCAL MSV -7.9350 0.71931 STATS LOCAL VITERBI -7.3801 0.71931 STATS LOCAL FORWARD -4.1967 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.08783 1.29601 1.90713 1.42327 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 0.00000 * 1 0.13263 3.45319 2.84909 3.36185 1 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 2 1.15878 2.17074 2.22351 0.76828 2 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 3 0.13263 3.45319 2.84909 3.36185 3 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 4 3.51693 0.12064 3.56276 2.88963 4 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 5 0.13263 3.45319 2.84909 3.36185 5 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 6 0.13263 3.45319 2.84909 3.36185 6 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 7 3.51693 0.12064 3.56276 2.88963 7 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 8 3.51693 0.12064 3.56276 2.88963 8 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 9 3.16284 2.64227 3.20813 0.16716 9 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 10 3.51693 0.12064 3.56276 2.88963 10 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 11 0.13263 3.45319 2.84909 3.36185 11 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 12 0.13263 3.45319 2.84909 3.36185 12 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 13 3.51693 0.12064 3.56276 2.88963 13 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 14 3.16284 2.64227 3.20813 0.16716 14 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 15 3.51693 0.12064 3.56276 2.88963 15 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 16 0.13263 3.45319 2.84909 3.36185 16 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 17 3.16284 2.64227 3.20813 0.16716 17 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 18 0.13263 3.45319 2.84909 3.36185 18 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 19 3.16284 2.64227 3.20813 0.16716 19 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 20 2.99774 3.66122 0.10943 3.57364 20 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 21 2.99774 3.66122 0.10943 3.57364 21 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 22 2.99774 3.66122 0.10943 3.57364 22 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 23 0.13263 3.45319 2.84909 3.36185 23 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 24 2.48941 1.18066 2.55916 0.62999 24 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 25 3.16284 2.64227 3.20813 0.16716 25 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 26 0.13263 3.45319 2.84909 3.36185 26 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 27 3.51693 0.12064 3.56276 2.88963 27 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 28 3.51693 0.12064 3.56276 2.88963 28 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 29 3.51693 0.12064 3.56276 2.88963 29 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 30 3.51693 0.12064 3.56276 2.88963 30 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 31 3.51693 0.12064 3.56276 2.88963 31 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 32 3.16284 2.64227 3.20813 0.16716 32 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 33 2.99774 3.66122 0.10943 3.57364 33 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 34 0.13263 3.45319 2.84909 3.36185 34 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 35 0.13263 3.45319 2.84909 3.36185 35 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 36 3.16284 2.64227 3.20813 0.16716 36 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 37 3.16284 2.64227 3.20813 0.16716 37 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 38 3.16284 2.64227 3.20813 0.16716 38 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 39 0.13263 3.45319 2.84909 3.36185 39 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 40 0.13263 3.45319 2.84909 3.36185 40 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 41 2.99774 3.66122 0.10943 3.57364 41 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 42 3.51693 0.12064 3.56276 2.88963 42 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 43 0.13263 3.45319 2.84909 3.36185 43 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 44 3.16284 2.64227 3.20813 0.16716 44 - - 1.38629 1.38629 1.38629 1.38629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547 45 0.13263 3.45319 2.84909 3.36185 45 - - 1.38629 1.38629 1.38629 1.38629 0.01783 4.03593 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Metazoa_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Mon Feb 27 22:49:34 2012 NSEQ 24 EFFN 4.110352 CKSUM 3861060913 STATS LOCAL MSV -7.2757 0.71932 STATS LOCAL VITERBI -7.5425 0.71932 STATS LOCAL FORWARD -4.1954 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24577 1.38621 1.49131 1.43893 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 0.00000 * 1 2.52986 2.30029 2.91720 0.26655 1 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 2 2.55091 1.00702 2.62071 0.72581 2 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 3 2.84685 1.70365 2.90630 0.34916 3 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 4 3.31876 2.74119 3.35792 0.14560 4 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 5 3.09695 3.80803 0.09565 3.73654 5 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 6 0.11574 3.60237 2.94493 3.52575 6 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 7 3.68657 0.10364 3.72466 3.01034 7 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 8 3.68657 0.10364 3.72466 3.01034 8 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 9 3.31876 2.74119 3.35792 0.14560 9 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 10 2.20818 0.75168 1.22058 2.09179 10 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 11 0.11574 3.60237 2.94493 3.52575 11 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 12 3.09695 3.80803 0.09565 3.73654 12 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 13 0.11574 3.60237 2.94493 3.52575 13 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 14 2.24775 2.24807 1.22321 0.70426 14 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 15 3.68657 0.10364 3.72466 3.01034 15 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 16 0.11574 3.60237 2.94493 3.52575 16 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 17 3.09695 3.80803 0.09565 3.73654 17 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 18 3.09695 3.80803 0.09565 3.73654 18 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 19 3.68657 0.10364 3.72466 3.01034 19 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 20 0.11574 3.60237 2.94493 3.52575 20 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 21 0.11574 3.60237 2.94493 3.52575 21 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 22 3.09695 3.80803 0.09565 3.73654 22 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 23 2.00849 3.22105 0.24712 3.10445 23 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 24 3.03663 0.27971 3.09824 1.89132 24 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 25 3.31876 2.74119 3.35792 0.14560 25 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 26 0.11574 3.60237 2.94493 3.52575 26 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 27 3.68657 0.10364 3.72466 3.01034 27 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 28 3.68657 0.10364 3.72466 3.01034 28 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 29 3.68657 0.10364 3.72466 3.01034 29 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 30 3.09695 3.80803 0.09565 3.73654 30 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 31 3.68657 0.10364 3.72466 3.01034 31 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 32 3.31876 2.74119 3.35792 0.14560 32 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 33 3.09695 3.80803 0.09565 3.73654 33 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 34 0.11574 3.60237 2.94493 3.52575 34 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 35 0.11574 3.60237 2.94493 3.52575 35 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 36 2.99452 1.98351 3.04820 0.26800 36 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 37 3.31876 2.74119 3.35792 0.14560 37 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 38 3.31876 2.74119 3.35792 0.14560 38 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 39 0.11574 3.60237 2.94493 3.52575 39 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 40 0.11574 3.60237 2.94493 3.52575 40 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 41 3.09695 3.80803 0.09565 3.73654 41 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 42 3.68657 0.10364 3.72466 3.01034 42 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 43 0.11574 3.60237 2.94493 3.52575 43 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 44 3.31876 2.74119 3.35792 0.14560 44 - - 1.38629 1.38629 1.38629 1.38629 0.03221 4.14478 4.14478 1.46634 0.26236 1.09861 0.40547 45 0.11574 3.60237 2.94493 3.52575 45 - - 1.38629 1.38629 1.38629 1.38629 0.01623 4.12880 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:41 2012 NSEQ 16 EFFN 3.191406 CKSUM 2446389716 STATS LOCAL MSV -8.0800 0.71932 STATS LOCAL VITERBI -7.7749 0.71932 STATS LOCAL FORWARD -4.3446 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33411 1.54690 1.19059 1.51568 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 * 1 0.14770 3.33730 2.77393 3.23493 1 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 2 2.91732 3.54398 0.12206 3.44415 2 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 3 3.04545 2.56765 3.09524 0.18579 3 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 4 3.38354 0.13628 3.43507 2.79277 4 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 5 2.91732 3.54398 0.12206 3.44415 5 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 6 3.04545 2.56765 3.09524 0.18579 6 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 7 0.14770 3.33730 2.77393 3.23493 7 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 8 0.14770 3.33730 2.77393 3.23493 8 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 9 3.38354 0.13628 3.43507 2.79277 9 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 10 0.14770 3.33730 2.77393 3.23493 10 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 11 0.14770 3.33730 2.77393 3.23493 11 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 12 2.91732 3.54398 0.12206 3.44415 12 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 13 2.91732 3.54398 0.12206 3.44415 13 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 14 3.04545 2.56765 3.09524 0.18579 14 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 15 0.14770 3.33730 2.77393 3.23493 15 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 16 3.38354 0.13628 3.43507 2.79277 16 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 17 3.38354 0.13628 3.43507 2.79277 17 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 18 3.04545 2.56765 3.09524 0.18579 18 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 19 2.91732 3.54398 0.12206 3.44415 19 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 20 3.04545 2.56765 3.09524 0.18579 20 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 21 0.14770 3.33730 2.77393 3.23493 21 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 22 2.91732 3.54398 0.12206 3.44415 22 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 23 2.91732 3.54398 0.12206 3.44415 23 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 24 3.04545 2.56765 3.09524 0.18579 24 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 25 2.91732 3.54398 0.12206 3.44415 25 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 26 0.14770 3.33730 2.77393 3.23493 26 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 27 0.14770 3.33730 2.77393 3.23493 27 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 28 3.38354 0.13628 3.43507 2.79277 28 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 29 3.38354 0.13628 3.43507 2.79277 29 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 30 3.04545 2.56765 3.09524 0.18579 30 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 31 2.91732 3.54398 0.12206 3.44415 31 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 32 3.38354 0.13628 3.43507 2.79277 32 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 33 0.14770 3.33730 2.77393 3.23493 33 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 34 2.91732 3.54398 0.12206 3.44415 34 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 35 2.91732 3.54398 0.12206 3.44415 35 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 36 3.04545 2.56765 3.09524 0.18579 36 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 37 2.91732 3.54398 0.12206 3.44415 37 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 38 2.91732 3.54398 0.12206 3.44415 38 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 39 0.14770 3.33730 2.77393 3.23493 39 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 40 3.04545 2.56765 3.09524 0.18579 40 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 41 3.38354 0.13628 3.43507 2.79277 41 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 42 0.14770 3.33730 2.77393 3.23493 42 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 43 3.04545 2.56765 3.09524 0.18579 43 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 44 3.38354 0.13628 3.43507 2.79277 44 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 45 2.91732 3.54398 0.12206 3.44415 45 - - 1.38629 1.38629 1.38629 1.38629 0.01908 3.96867 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:28:00 2012 NSEQ 10 EFFN 3.208008 CKSUM 3737760971 STATS LOCAL MSV -8.0645 0.71933 STATS LOCAL VITERBI -7.5468 0.71933 STATS LOCAL FORWARD -4.2182 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39966 1.54309 1.19163 1.44446 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 0.00000 * 1 0.14694 3.34284 2.77755 3.24098 1 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 2 2.92124 3.54964 0.12142 3.45039 2 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 3 3.05099 2.57118 3.10057 0.18486 3 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 4 3.38993 0.13548 3.44120 2.79746 4 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 5 2.92124 3.54964 0.12142 3.45039 5 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 6 3.05099 2.57118 3.10057 0.18486 6 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 7 0.14694 3.34284 2.77755 3.24098 7 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 8 0.14694 3.34284 2.77755 3.24098 8 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 9 3.38993 0.13548 3.44120 2.79746 9 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 10 0.14694 3.34284 2.77755 3.24098 10 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 11 0.14694 3.34284 2.77755 3.24098 11 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 12 2.92124 3.54964 0.12142 3.45039 12 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 13 2.92124 3.54964 0.12142 3.45039 13 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 14 3.05099 2.57118 3.10057 0.18486 14 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 15 2.92124 3.54964 0.12142 3.45039 15 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 16 2.92124 3.54964 0.12142 3.45039 16 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 17 3.38993 0.13548 3.44120 2.79746 17 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 18 3.05099 2.57118 3.10057 0.18486 18 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 19 2.92124 3.54964 0.12142 3.45039 19 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 20 3.05099 2.57118 3.10057 0.18486 20 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 21 0.14694 3.34284 2.77755 3.24098 21 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 22 2.92124 3.54964 0.12142 3.45039 22 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 23 2.92124 3.54964 0.12142 3.45039 23 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 24 3.05099 2.57118 3.10057 0.18486 24 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 25 2.92124 3.54964 0.12142 3.45039 25 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 26 0.14694 3.34284 2.77755 3.24098 26 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 27 0.14694 3.34284 2.77755 3.24098 27 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 28 3.38993 0.13548 3.44120 2.79746 28 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 29 3.38993 0.13548 3.44120 2.79746 29 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 30 3.05099 2.57118 3.10057 0.18486 30 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 31 2.92124 3.54964 0.12142 3.45039 31 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 32 3.38993 0.13548 3.44120 2.79746 32 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 33 3.05099 2.57118 3.10057 0.18486 33 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 34 2.92124 3.54964 0.12142 3.45039 34 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 35 3.38993 0.13548 3.44120 2.79746 35 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 36 3.38993 0.13548 3.44120 2.79746 36 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 37 2.92124 3.54964 0.12142 3.45039 37 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 38 2.92124 3.54964 0.12142 3.45039 38 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 39 0.14694 3.34284 2.77755 3.24098 39 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 40 3.05099 2.57118 3.10057 0.18486 40 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 41 3.38993 0.13548 3.44120 2.79746 41 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 42 0.14694 3.34284 2.77755 3.24098 42 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 43 3.05099 2.57118 3.10057 0.18486 43 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 44 3.05099 2.57118 3.10057 0.18486 44 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 45 0.14694 3.34284 2.77755 3.24098 45 - - 1.38629 1.38629 1.38629 1.38629 0.01902 3.97180 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:18 2012 NSEQ 591 EFFN 3.386238 CKSUM 2887535700 STATS LOCAL MSV -7.4974 0.71934 STATS LOCAL VITERBI -7.6825 0.71934 STATS LOCAL FORWARD -4.1124 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26745 1.62592 1.24870 1.44883 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 0.00000 * 1 0.13927 3.40040 2.81499 3.30397 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 2 2.96152 3.60814 0.11495 3.51494 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 3 3.10898 2.60809 3.15635 0.17543 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 4 3.39712 0.13994 3.44732 2.72887 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 5 2.96152 3.60814 0.11495 3.51494 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 6 3.10898 2.60809 3.15635 0.17543 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 7 0.13927 3.40040 2.81499 3.30397 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 8 0.13927 3.40040 2.81499 3.30397 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 9 3.45629 0.12748 3.50476 2.84585 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 10 0.13927 3.40040 2.81499 3.30397 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 11 0.13927 3.40040 2.81499 3.30397 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 12 2.96152 3.60814 0.11495 3.51494 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 13 2.96152 3.60814 0.11495 3.51494 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 14 3.07323 2.51816 3.12180 0.18748 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 15 3.06966 2.50946 3.11836 0.18872 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 16 3.10898 2.60809 3.15635 0.17543 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 17 3.36000 0.14815 3.41138 2.65969 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 18 3.26516 0.15740 3.13844 2.74735 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 19 2.87964 3.24062 0.14052 3.32982 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 20 3.10898 2.60809 3.15635 0.17543 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 21 0.13927 3.40040 2.81499 3.30397 21 - - 1.38629 1.38629 1.38629 1.38629 0.05903 4.02289 3.23357 1.46634 0.26236 1.09861 0.40547 22 2.93472 3.56915 0.11922 3.47190 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00114 4.00114 1.46634 0.26236 0.64622 0.74239 23 2.96152 3.60814 0.11495 3.51494 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 24 2.99011 2.56246 2.89768 0.20156 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 25 2.96152 3.60814 0.11495 3.51494 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 26 0.13927 3.40040 2.81499 3.30397 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 27 0.13927 3.40040 2.81499 3.30397 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 4.02289 3.93074 1.46634 0.26236 1.09861 0.40547 28 3.45281 0.12788 3.50143 2.84332 28 - - 1.38629 1.38629 1.38629 1.38629 0.03652 4.02116 4.02116 1.46634 0.26236 1.03813 0.43714 29 3.20662 0.14667 3.38275 2.78108 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 30 3.07681 2.52693 3.12525 0.18625 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 31 2.84254 3.36777 0.15302 3.01292 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 32 3.45629 0.12748 3.50476 2.84585 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 33 2.96152 3.60814 0.11495 3.51494 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 34 2.87301 3.42675 0.14271 3.12424 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 35 0.13927 3.40040 2.81499 3.30397 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 36 0.13927 3.40040 2.81499 3.30397 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 37 2.96152 3.60814 0.11495 3.51494 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 38 2.96152 3.60814 0.11495 3.51494 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 39 0.13927 3.40040 2.81499 3.30397 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 40 3.10898 2.60809 3.15635 0.17543 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 41 3.45629 0.12748 3.50476 2.84585 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 42 0.15066 3.35632 2.71005 3.25812 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 43 3.10898 2.60809 3.15635 0.17543 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 44 2.89278 2.11895 2.94823 0.25879 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02289 4.02289 1.46634 0.26236 1.09861 0.40547 45 0.14853 3.36439 2.72868 3.26658 45 - - 1.38629 1.38629 1.38629 1.38629 0.01840 4.00483 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:06 2012 NSEQ 4 EFFN 3.472656 CKSUM 3645550443 STATS LOCAL MSV -7.4702 0.71932 STATS LOCAL VITERBI -7.5589 0.71932 STATS LOCAL FORWARD -4.2514 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26293 1.64993 1.23935 1.44588 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 0.00000 * 1 0.13586 3.42710 2.83226 3.33324 1 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 2 2.97992 3.63506 0.11211 3.54469 2 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 3 3.13614 2.62533 3.18246 0.17120 3 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 4 3.48700 0.12396 3.53414 2.86806 4 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 5 2.97992 3.63506 0.11211 3.54469 5 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 6 3.13614 2.62533 3.18246 0.17120 6 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 7 0.13586 3.42710 2.83226 3.33324 7 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 8 0.13586 3.42710 2.83226 3.33324 8 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 9 3.48700 0.12396 3.53414 2.86806 9 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 10 0.13586 3.42710 2.83226 3.33324 10 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 11 0.13586 3.42710 2.83226 3.33324 11 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 12 2.97992 3.63506 0.11211 3.54469 12 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 13 2.97992 3.63506 0.11211 3.54469 13 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 14 3.13614 2.62533 3.18246 0.17120 14 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 15 0.13586 3.42710 2.83226 3.33324 15 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 16 2.97992 3.63506 0.11211 3.54469 16 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 17 3.48700 0.12396 3.53414 2.86806 17 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 18 3.13614 2.62533 3.18246 0.17120 18 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 19 2.97992 3.63506 0.11211 3.54469 19 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 20 3.13614 2.62533 3.18246 0.17120 20 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 21 0.13586 3.42710 2.83226 3.33324 21 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 22 2.97992 3.63506 0.11211 3.54469 22 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 23 2.97992 3.63506 0.11211 3.54469 23 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 24 3.13614 2.62533 3.18246 0.17120 24 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 25 2.97992 3.63506 0.11211 3.54469 25 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 26 0.13586 3.42710 2.83226 3.33324 26 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 27 0.13586 3.42710 2.83226 3.33324 27 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 28 3.48700 0.12396 3.53414 2.86806 28 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 29 3.48700 0.12396 3.53414 2.86806 29 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 30 3.13614 2.62533 3.18246 0.17120 30 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 31 2.97992 3.63506 0.11211 3.54469 31 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 32 3.48700 0.12396 3.53414 2.86806 32 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 33 2.43204 0.95279 2.50379 0.81035 33 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 34 2.97992 3.63506 0.11211 3.54469 34 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 35 0.13586 3.42710 2.83226 3.33324 35 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 36 3.13614 2.62533 3.18246 0.17120 36 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 37 2.97992 3.63506 0.11211 3.54469 37 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 38 2.97992 3.63506 0.11211 3.54469 38 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 39 0.13586 3.42710 2.83226 3.33324 39 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 40 3.13614 2.62533 3.18246 0.17120 40 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 41 3.48700 0.12396 3.53414 2.86806 41 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 42 0.13586 3.42710 2.83226 3.33324 42 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 43 2.43204 0.95279 2.50379 0.81035 43 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 44 3.13614 2.62533 3.18246 0.17120 44 - - 1.38629 1.38629 1.38629 1.38629 0.03589 4.03824 4.03824 1.46634 0.26236 1.09861 0.40547 45 0.13586 3.42710 2.83226 3.33324 45 - - 1.38629 1.38629 1.38629 1.38629 0.01811 4.02046 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:26:32 2012 NSEQ 2 EFFN 2.000000 CKSUM 1503601274 STATS LOCAL MSV -7.3789 0.72782 STATS LOCAL VITERBI -8.2132 0.72782 STATS LOCAL FORWARD -3.5272 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28360 1.60112 1.25644 1.44128 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:33 2012 NSEQ 18 EFFN 3.229980 CKSUM 3803743119 STATS LOCAL MSV -8.0117 0.71931 STATS LOCAL VITERBI -7.6232 0.71931 STATS LOCAL FORWARD -4.2368 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27186 1.62652 1.24657 1.44567 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 0.00000 * 1 0.14594 3.35012 2.78230 3.24895 1 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 2 2.92638 3.55708 0.12057 3.45859 2 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 3 3.05828 2.57583 3.10759 0.18364 3 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 4 3.39834 0.13443 3.44926 2.80362 4 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 5 2.92638 3.55708 0.12057 3.45859 5 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 6 3.05828 2.57583 3.10759 0.18364 6 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 7 0.14594 3.35012 2.78230 3.24895 7 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 8 0.14594 3.35012 2.78230 3.24895 8 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 9 3.39834 0.13443 3.44926 2.80362 9 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 10 0.14594 3.35012 2.78230 3.24895 10 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 11 0.14594 3.35012 2.78230 3.24895 11 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 12 2.92638 3.55708 0.12057 3.45859 12 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 13 2.92638 3.55708 0.12057 3.45859 13 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 14 3.05828 2.57583 3.10759 0.18364 14 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 15 0.14594 3.35012 2.78230 3.24895 15 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 16 3.05828 2.57583 3.10759 0.18364 16 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 17 3.39834 0.13443 3.44926 2.80362 17 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 18 3.05828 2.57583 3.10759 0.18364 18 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 19 2.92638 3.55708 0.12057 3.45859 19 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 20 3.05828 2.57583 3.10759 0.18364 20 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 21 0.14594 3.35012 2.78230 3.24895 21 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 22 2.92638 3.55708 0.12057 3.45859 22 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 23 2.92638 3.55708 0.12057 3.45859 23 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 24 3.05828 2.57583 3.10759 0.18364 24 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 25 2.92638 3.55708 0.12057 3.45859 25 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 26 0.14594 3.35012 2.78230 3.24895 26 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 27 0.14594 3.35012 2.78230 3.24895 27 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 28 3.39834 0.13443 3.44926 2.80362 28 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 29 3.39834 0.13443 3.44926 2.80362 29 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 30 3.05828 2.57583 3.10759 0.18364 30 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 31 2.92638 3.55708 0.12057 3.45859 31 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 32 3.39834 0.13443 3.44926 2.80362 32 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 33 0.14594 3.35012 2.78230 3.24895 33 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 34 2.92638 3.55708 0.12057 3.45859 34 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 35 0.14594 3.35012 2.78230 3.24895 35 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 36 3.05828 2.57583 3.10759 0.18364 36 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 37 2.92638 3.55708 0.12057 3.45859 37 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 38 2.92638 3.55708 0.12057 3.45859 38 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 39 0.14594 3.35012 2.78230 3.24895 39 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 40 3.05828 2.57583 3.10759 0.18364 40 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 41 3.39834 0.13443 3.44926 2.80362 41 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 42 0.14594 3.35012 2.78230 3.24895 42 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 43 3.05828 2.57583 3.10759 0.18364 43 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 44 3.39834 0.13443 3.44926 2.80362 44 - - 1.38629 1.38629 1.38629 1.38629 0.03753 3.99452 3.99452 1.46634 0.26236 1.09861 0.40547 45 2.92638 3.55708 0.12057 3.45859 45 - - 1.38629 1.38629 1.38629 1.38629 0.01894 3.97593 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:25 2012 NSEQ 2 EFFN 2.000000 CKSUM 4122535879 STATS LOCAL MSV -7.3837 0.72782 STATS LOCAL VITERBI -8.2233 0.72782 STATS LOCAL FORWARD -3.6249 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28359 1.60112 1.25644 1.44128 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:27:52 2012 NSEQ 62 EFFN 3.265747 CKSUM 2000784101 STATS LOCAL MSV -8.1222 0.71931 STATS LOCAL VITERBI -7.5567 0.71931 STATS LOCAL FORWARD -4.4003 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33291 1.62010 1.24727 1.38180 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 0.00000 * 1 0.14435 3.36186 2.78995 3.26179 1 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 2 2.93465 3.56905 0.11923 3.47179 2 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 3 3.00370 2.42271 3.05476 0.20508 3 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 4 3.41189 0.13277 3.46224 2.81353 4 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 5 2.93465 3.56905 0.11923 3.47179 5 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 6 3.07007 2.58334 3.11893 0.18169 6 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 7 0.14435 3.36186 2.78995 3.26179 7 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 8 0.14435 3.36186 2.78995 3.26179 8 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 9 3.41189 0.13277 3.46224 2.81353 9 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 10 0.14435 3.36186 2.78995 3.26179 10 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 11 0.14435 3.36186 2.78995 3.26179 11 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 12 2.93465 3.56905 0.11923 3.47179 12 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 13 2.93465 3.56905 0.11923 3.47179 13 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 14 3.07007 2.58334 3.11893 0.18169 14 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 15 0.14435 3.36186 2.78995 3.26179 15 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 16 2.93465 3.56905 0.11923 3.47179 16 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 17 3.41189 0.13277 3.46224 2.81353 17 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 18 3.07007 2.58334 3.11893 0.18169 18 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 19 2.93465 3.56905 0.11923 3.47179 19 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 20 3.00370 2.42271 3.05476 0.20508 20 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 21 0.14435 3.36186 2.78995 3.26179 21 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 22 2.93465 3.56905 0.11923 3.47179 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 23 2.93465 3.56905 0.11923 3.47179 23 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 24 3.07007 2.58334 3.11893 0.18169 24 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 25 2.93465 3.56905 0.11923 3.47179 25 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 26 0.14435 3.36186 2.78995 3.26179 26 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 27 0.14435 3.36186 2.78995 3.26179 27 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 28 3.41189 0.13277 3.46224 2.81353 28 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 29 3.41189 0.13277 3.46224 2.81353 29 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 30 3.07007 2.58334 3.11893 0.18169 30 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 31 2.93465 3.56905 0.11923 3.47179 31 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 32 3.41189 0.13277 3.46224 2.81353 32 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 33 3.07007 2.58334 3.11893 0.18169 33 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 34 2.93465 3.56905 0.11923 3.47179 34 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 35 3.41189 0.13277 3.46224 2.81353 35 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 36 3.07007 2.58334 3.11893 0.18169 36 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 37 2.93465 3.56905 0.11923 3.47179 37 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 38 2.93465 3.56905 0.11923 3.47179 38 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 39 0.14435 3.36186 2.78995 3.26179 39 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 40 3.07007 2.58334 3.11893 0.18169 40 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 41 3.41189 0.13277 3.46224 2.81353 41 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 42 0.14435 3.36186 2.78995 3.26179 42 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 43 3.07007 2.58334 3.11893 0.18169 43 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 44 3.07007 2.58334 3.11893 0.18169 44 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00109 4.00109 1.46634 0.26236 1.09861 0.40547 45 0.14435 3.36186 2.78995 3.26179 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98262 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:26:53 2012 NSEQ 48 EFFN 3.360352 CKSUM 289798115 STATS LOCAL MSV -8.0419 0.71933 STATS LOCAL VITERBI -7.6796 0.71933 STATS LOCAL FORWARD -4.4230 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32949 1.58777 1.24433 1.41522 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 0.00000 * 1 0.14032 3.39225 2.80970 3.29505 1 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 2 2.95587 3.59990 0.11584 3.50584 2 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 3 3.10072 2.60284 3.14841 0.17674 3 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 4 3.44691 0.12857 3.49579 2.83904 4 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 5 2.95587 3.59990 0.11584 3.50584 5 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 6 3.10072 2.60284 3.14841 0.17674 6 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 7 0.14032 3.39225 2.80970 3.29505 7 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 8 0.14032 3.39225 2.80970 3.29505 8 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 9 3.44691 0.12857 3.49579 2.83904 9 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 10 0.14032 3.39225 2.80970 3.29505 10 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 11 0.14032 3.39225 2.80970 3.29505 11 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 12 2.95587 3.59990 0.11584 3.50584 12 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 13 2.95587 3.59990 0.11584 3.50584 13 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 14 3.10072 2.60284 3.14841 0.17674 14 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 15 0.14032 3.39225 2.80970 3.29505 15 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 16 2.95587 3.59990 0.11584 3.50584 16 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 17 3.44691 0.12857 3.49579 2.83904 17 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 18 2.41326 0.87609 2.48559 0.88966 18 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 19 2.95587 3.59990 0.11584 3.50584 19 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 20 3.10072 2.60284 3.14841 0.17674 20 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 21 0.14032 3.39225 2.80970 3.29505 21 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 22 2.95587 3.59990 0.11584 3.50584 22 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 23 2.95587 3.59990 0.11584 3.50584 23 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 24 3.10072 2.60284 3.14841 0.17674 24 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 25 2.95587 3.59990 0.11584 3.50584 25 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 26 0.14032 3.39225 2.80970 3.29505 26 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 27 0.14032 3.39225 2.80970 3.29505 27 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 28 3.44691 0.12857 3.49579 2.83904 28 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 29 3.44691 0.12857 3.49579 2.83904 29 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 30 3.10072 2.60284 3.14841 0.17674 30 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 31 3.10072 2.60284 3.14841 0.17674 31 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 32 3.44691 0.12857 3.49579 2.83904 32 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 33 2.95587 3.59990 0.11584 3.50584 33 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 34 2.95587 3.59990 0.11584 3.50584 34 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 35 3.44691 0.12857 3.49579 2.83904 35 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 36 3.02168 2.41083 3.07214 0.20430 36 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 37 2.95587 3.59990 0.11584 3.50584 37 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 38 2.95587 3.59990 0.11584 3.50584 38 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 39 0.14032 3.39225 2.80970 3.29505 39 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 40 3.10072 2.60284 3.14841 0.17674 40 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 41 3.44691 0.12857 3.49579 2.83904 41 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 42 0.14032 3.39225 2.80970 3.29505 42 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 43 3.10072 2.60284 3.14841 0.17674 43 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 44 3.10072 2.60284 3.14841 0.17674 44 - - 1.38629 1.38629 1.38629 1.38629 0.03663 4.01825 4.01825 1.46634 0.26236 1.09861 0.40547 45 0.14032 3.39225 2.80970 3.29505 45 - - 1.38629 1.38629 1.38629 1.38629 0.01848 4.00010 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Metazoa_1_SSU_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sun Feb 19 01:26:41 2012 NSEQ 24 EFFN 3.424805 CKSUM 2794101933 STATS LOCAL MSV -7.4074 0.71933 STATS LOCAL VITERBI -7.5219 0.71933 STATS LOCAL FORWARD -4.3767 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32087 1.61279 1.23841 1.41090 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 0.00000 * 1 0.13772 3.41241 2.82276 3.31713 1 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 2 2.96982 3.62027 0.11366 3.52834 2 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 3 3.12118 2.61584 3.16808 0.17352 3 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 4 3.47011 0.12588 3.51799 2.85586 4 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 5 2.96982 3.62027 0.11366 3.52834 5 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 6 3.12118 2.61584 3.16808 0.17352 6 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 7 0.13772 3.41241 2.82276 3.31713 7 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 8 0.13772 3.41241 2.82276 3.31713 8 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 9 3.47011 0.12588 3.51799 2.85586 9 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 10 0.13772 3.41241 2.82276 3.31713 10 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 11 0.13772 3.41241 2.82276 3.31713 11 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 12 2.96982 3.62027 0.11366 3.52834 12 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 13 2.96982 3.62027 0.11366 3.52834 13 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 14 3.12118 2.61584 3.16808 0.17352 14 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 15 0.13772 3.41241 2.82276 3.31713 15 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 16 2.96982 3.62027 0.11366 3.52834 16 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 17 3.47011 0.12588 3.51799 2.85586 17 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 18 3.12118 2.61584 3.16808 0.17352 18 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 19 2.96982 3.62027 0.11366 3.52834 19 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 20 3.12118 2.61584 3.16808 0.17352 20 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 21 0.13772 3.41241 2.82276 3.31713 21 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 22 2.96982 3.62027 0.11366 3.52834 22 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 23 2.96982 3.62027 0.11366 3.52834 23 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 24 3.12118 2.61584 3.16808 0.17352 24 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 25 2.96982 3.62027 0.11366 3.52834 25 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 26 0.13772 3.41241 2.82276 3.31713 26 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 27 0.13772 3.41241 2.82276 3.31713 27 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 28 3.47011 0.12588 3.51799 2.85586 28 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 29 3.47011 0.12588 3.51799 2.85586 29 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 30 3.12118 2.61584 3.16808 0.17352 30 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 31 2.96982 3.62027 0.11366 3.52834 31 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 32 3.47011 0.12588 3.51799 2.85586 32 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 33 2.13519 2.26919 2.09248 0.42312 33 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 34 2.96982 3.62027 0.11366 3.52834 34 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 35 3.47011 0.12588 3.51799 2.85586 35 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 36 2.10812 1.99792 2.53146 0.41042 36 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 37 2.96982 3.62027 0.11366 3.52834 37 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 38 2.96982 3.62027 0.11366 3.52834 38 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 39 0.13772 3.41241 2.82276 3.31713 39 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 40 3.12118 2.61584 3.16808 0.17352 40 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 41 3.47011 0.12588 3.51799 2.85586 41 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 42 0.13772 3.41241 2.82276 3.31713 42 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 43 2.97957 2.28186 3.03175 0.22457 43 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 44 3.12118 2.61584 3.16808 0.17352 44 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 45 0.13772 3.41241 2.82276 3.31713 45 - - 1.38629 1.38629 1.38629 1.38629 0.01827 4.01183 * 1.46634 0.26236 0.00000 * //