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view ITSx_db/HMMs/F.hmm @ 0:f82c70f54bd7 draft
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| author | okorol |
|---|---|
| date | Tue, 24 Mar 2015 12:02:48 -0400 |
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HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ca_58S_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:07:35 2012 NSEQ 24 EFFN 3.272461 CKSUM 1239174981 STATS LOCAL MSV -8.1718 0.71931 STATS LOCAL VITERBI -7.7338 0.71931 STATS LOCAL FORWARD -3.5765 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.36710 1.94048 0.91540 1.60363 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 0.00000 * 1 2.93618 3.57128 0.11898 3.47424 1 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 2 3.07227 2.58474 3.12105 0.18133 2 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 3 2.93618 3.57128 0.11898 3.47424 3 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 4 2.93618 3.57128 0.11898 3.47424 4 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 5 3.41442 0.13246 3.46466 2.81537 5 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 6 2.93618 3.57128 0.11898 3.47424 6 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 7 2.93618 3.57128 0.11898 3.47424 7 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 8 0.14405 3.36405 2.79138 3.26418 8 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 9 2.93618 3.57128 0.11898 3.47424 9 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 10 2.93618 3.57128 0.11898 3.47424 10 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 11 0.14405 3.36405 2.79138 3.26418 11 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 12 3.07227 2.58474 3.12105 0.18133 12 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 13 2.93618 3.57128 0.11898 3.47424 13 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 14 0.14405 3.36405 2.79138 3.26418 14 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 15 0.14405 3.36405 2.79138 3.26418 15 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 16 2.93618 3.57128 0.11898 3.47424 16 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 17 0.14405 3.36405 2.79138 3.26418 17 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 18 3.41442 0.13246 3.46466 2.81537 18 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 19 0.14405 3.36405 2.79138 3.26418 19 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 20 0.14405 3.36405 2.79138 3.26418 20 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 21 2.93618 3.57128 0.11898 3.47424 21 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 22 2.93618 3.57128 0.11898 3.47424 22 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 23 2.93618 3.57128 0.11898 3.47424 23 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 24 3.07227 2.58474 3.12105 0.18133 24 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 25 0.14405 3.36405 2.79138 3.26418 25 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 26 3.07227 2.58474 3.12105 0.18133 26 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 27 3.41442 0.13246 3.46466 2.81537 27 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 28 3.07227 2.58474 3.12105 0.18133 28 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 29 3.41442 0.13246 3.46466 2.81537 29 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 30 3.07227 2.58474 3.12105 0.18133 30 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 31 2.93618 3.57128 0.11898 3.47424 31 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 32 2.93618 3.57128 0.11898 3.47424 32 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 33 3.41442 0.13246 3.46466 2.81537 33 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 34 2.94687 2.29169 3.00002 0.22738 34 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 35 2.93618 3.57128 0.11898 3.47424 35 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 36 0.14405 3.36405 2.79138 3.26418 36 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 37 2.93618 3.57128 0.11898 3.47424 37 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 38 2.93618 3.57128 0.11898 3.47424 38 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 39 2.93618 3.57128 0.11898 3.47424 39 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 40 3.07227 2.58474 3.12105 0.18133 40 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 41 0.14405 3.36405 2.79138 3.26418 41 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 42 0.14405 3.36405 2.79138 3.26418 42 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 43 3.07227 2.58474 3.12105 0.18133 43 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 44 2.93618 3.57128 0.11898 3.47424 44 - - 1.38629 1.38629 1.38629 1.38629 0.03723 4.00231 4.00231 1.46634 0.26236 1.09861 0.40547 45 0.95624 2.51422 0.81844 2.36852 45 - - 1.38629 1.38629 1.38629 1.38629 0.01879 3.98387 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ca_58S_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:07:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 3084094019 STATS LOCAL MSV -7.5104 0.72786 STATS LOCAL VITERBI -8.2992 0.72786 STATS LOCAL FORWARD -2.7361 0.72786 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.38523 1.76536 1.00666 1.54566 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 1.89532 1.96405 1.06955 1.00436 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ca_58S_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:07:48 2012 NSEQ 2 EFFN 2.000000 CKSUM 4134880411 STATS LOCAL MSV -7.5386 0.72700 STATS LOCAL VITERBI -8.2359 0.72700 STATS LOCAL FORWARD -2.9834 0.72700 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28368 1.70239 1.02070 1.71262 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Cr_58S_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:32:01 2012 NSEQ 2 EFFN 2.000000 CKSUM 2871339334 STATS LOCAL MSV -7.3173 0.72793 STATS LOCAL VITERBI -8.3191 0.72793 STATS LOCAL FORWARD -3.7044 0.72793 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.64878 1.74213 1.07035 1.23899 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Cr_58S_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:32:37 2012 NSEQ 4 EFFN 3.402344 CKSUM 2082718384 STATS LOCAL MSV -7.1338 0.71932 STATS LOCAL VITERBI -7.7654 0.71932 STATS LOCAL FORWARD -4.3570 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62040 1.87208 1.07964 1.17552 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 0.00000 * 1 0.13862 3.40543 2.81825 3.30949 1 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 2 3.11409 2.61134 3.16126 0.17462 2 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 3 3.11409 2.61134 3.16126 0.17462 3 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 4 2.96500 3.61323 0.11441 3.52056 4 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 5 2.96500 3.61323 0.11441 3.52056 5 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 6 2.96500 3.61323 0.11441 3.52056 6 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 7 2.96500 3.61323 0.11441 3.52056 7 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 8 2.96500 3.61323 0.11441 3.52056 8 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 9 3.11409 2.61134 3.16126 0.17462 9 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 10 3.11409 2.61134 3.16126 0.17462 10 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 11 2.96500 3.61323 0.11441 3.52056 11 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 12 0.13862 3.40543 2.81825 3.30949 12 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 13 3.46209 0.12680 3.51031 2.85005 13 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 14 3.11409 2.61134 3.16126 0.17462 14 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 15 3.46209 0.12680 3.51031 2.85005 15 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 16 0.13862 3.40543 2.81825 3.30949 16 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 17 3.11409 2.61134 3.16126 0.17462 17 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 18 0.13862 3.40543 2.81825 3.30949 18 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 19 2.96500 3.61323 0.11441 3.52056 19 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 20 2.96500 3.61323 0.11441 3.52056 20 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 21 2.96500 3.61323 0.11441 3.52056 21 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 22 2.96500 3.61323 0.11441 3.52056 22 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 23 2.96500 3.61323 0.11441 3.52056 23 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 24 3.11409 2.61134 3.16126 0.17462 24 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 25 0.13862 3.40543 2.81825 3.30949 25 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 26 3.46209 0.12680 3.51031 2.85005 26 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 27 0.13862 3.40543 2.81825 3.30949 27 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 28 3.11409 2.61134 3.16126 0.17462 28 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 29 3.46209 0.12680 3.51031 2.85005 29 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 30 3.11409 2.61134 3.16126 0.17462 30 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 31 2.96500 3.61323 0.11441 3.52056 31 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 32 3.11409 2.61134 3.16126 0.17462 32 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 33 3.11409 2.61134 3.16126 0.17462 33 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 34 2.41957 0.95497 2.49149 0.81322 34 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 35 2.96500 3.61323 0.11441 3.52056 35 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 36 0.13862 3.40543 2.81825 3.30949 36 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 37 2.96500 3.61323 0.11441 3.52056 37 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 38 2.96500 3.61323 0.11441 3.52056 38 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 39 2.96500 3.61323 0.11441 3.52056 39 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 40 3.11409 2.61134 3.16126 0.17462 40 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 41 3.46209 0.12680 3.51031 2.85005 41 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 42 0.13862 3.40543 2.81825 3.30949 42 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 43 3.11409 2.61134 3.16126 0.17462 43 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 44 3.11409 2.61134 3.16126 0.17462 44 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 45 3.11409 2.61134 3.16126 0.17462 45 - - 1.38629 1.38629 1.38629 1.38629 0.01834 4.00776 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Cr_58S_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:32:21 2012 NSEQ 2 EFFN 2.000000 CKSUM 2696739642 STATS LOCAL MSV -7.3238 0.72814 STATS LOCAL VITERBI -8.3458 0.72814 STATS LOCAL FORWARD -3.6883 0.72814 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.57598 1.82266 1.11290 1.19404 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:11 2012 NSEQ 2 EFFN 2.000000 CKSUM 2243327645 STATS LOCAL MSV -7.6365 0.72764 STATS LOCAL VITERBI -8.4513 0.72764 STATS LOCAL FORWARD -3.1656 0.72764 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40767 1.06102 1.51059 1.66916 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:58 2012 NSEQ 14 EFFN 3.209473 CKSUM 1915176416 STATS LOCAL MSV -8.0420 0.71931 STATS LOCAL VITERBI -7.6843 0.71931 STATS LOCAL FORWARD -3.8892 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47838 1.11688 1.31754 1.73216 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 0.00000 * 1 2.92158 3.55014 0.12136 3.45094 1 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 2 3.39050 0.13541 3.44174 2.79787 2 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 3 0.14687 3.34333 2.77786 3.24152 3 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 4 3.39050 0.13541 3.44174 2.79787 4 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 5 3.39050 0.13541 3.44174 2.79787 5 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 6 3.39050 0.13541 3.44174 2.79787 6 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 7 3.05148 2.57149 3.10104 0.18478 7 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 8 3.39050 0.13541 3.44174 2.79787 8 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 9 3.39050 0.13541 3.44174 2.79787 9 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 10 3.05148 2.57149 3.10104 0.18478 10 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 11 3.39050 0.13541 3.44174 2.79787 11 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 12 0.14687 3.34333 2.77786 3.24152 12 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 13 3.39050 0.13541 3.44174 2.79787 13 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 14 0.14687 3.34333 2.77786 3.24152 14 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 15 0.14687 3.34333 2.77786 3.24152 15 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 16 2.92158 3.55014 0.12136 3.45094 16 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 17 2.92158 3.55014 0.12136 3.45094 17 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 18 2.92158 3.55014 0.12136 3.45094 18 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 19 0.14687 3.34333 2.77786 3.24152 19 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 20 2.92158 3.55014 0.12136 3.45094 20 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 21 0.14687 3.34333 2.77786 3.24152 21 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 22 2.92158 3.55014 0.12136 3.45094 22 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 23 2.92158 3.55014 0.12136 3.45094 23 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 24 3.05148 2.57149 3.10104 0.18478 24 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 25 0.14687 3.34333 2.77786 3.24152 25 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 26 3.05148 2.57149 3.10104 0.18478 26 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 27 2.92158 3.55014 0.12136 3.45094 27 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 28 2.68235 0.39803 2.75144 1.62901 28 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 29 3.39050 0.13541 3.44174 2.79787 29 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 30 3.39050 0.13541 3.44174 2.79787 30 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 31 3.39050 0.13541 3.44174 2.79787 31 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 32 3.05148 2.57149 3.10104 0.18478 32 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 33 2.92158 3.55014 0.12136 3.45094 33 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 34 3.05148 2.57149 3.10104 0.18478 34 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 35 2.92158 3.55014 0.12136 3.45094 35 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 36 0.14687 3.34333 2.77786 3.24152 36 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 37 2.92158 3.55014 0.12136 3.45094 37 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 38 3.39050 0.13541 3.44174 2.79787 38 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 39 2.92158 3.55014 0.12136 3.45094 39 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 40 3.39050 0.13541 3.44174 2.79787 40 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 41 0.14687 3.34333 2.77786 3.24152 41 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 42 3.39050 0.13541 3.44174 2.79787 42 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 43 3.39050 0.13541 3.44174 2.79787 43 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 44 3.05148 2.57149 3.10104 0.18478 44 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 45 0.14687 3.34333 2.77786 3.24152 45 - - 1.38629 1.38629 1.38629 1.38629 0.01901 3.97208 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:46 2012 NSEQ 50 EFFN 3.207397 CKSUM 3396287535 STATS LOCAL MSV -8.1714 0.71932 STATS LOCAL VITERBI -7.6068 0.71932 STATS LOCAL FORWARD -4.1918 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.48059 1.14781 1.45890 1.50206 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 0.00000 * 1 3.38970 0.13551 3.44098 2.79729 1 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 2 0.14697 3.34263 2.77741 3.24076 2 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 3 3.38970 0.13551 3.44098 2.79729 3 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 4 3.38970 0.13551 3.44098 2.79729 4 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 5 2.92110 3.54943 0.12144 3.45016 5 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 6 0.14697 3.34263 2.77741 3.24076 6 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 7 2.92110 3.54943 0.12144 3.45016 7 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 8 3.38970 0.13551 3.44098 2.79729 8 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 9 3.05078 2.57105 3.10038 0.18490 9 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 10 3.38970 0.13551 3.44098 2.79729 10 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 11 3.05078 2.57105 3.10038 0.18490 11 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 12 0.14697 3.34263 2.77741 3.24076 12 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 13 3.38970 0.13551 3.44098 2.79729 13 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 14 3.38970 0.13551 3.44098 2.79729 14 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 15 3.38970 0.13551 3.44098 2.79729 15 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 16 2.92110 3.54943 0.12144 3.45016 16 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 17 0.14697 3.34263 2.77741 3.24076 17 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 18 2.92110 3.54943 0.12144 3.45016 18 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 19 3.38970 0.13551 3.44098 2.79729 19 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 20 0.14697 3.34263 2.77741 3.24076 20 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 21 3.38970 0.13551 3.44098 2.79729 21 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 22 2.92110 3.54943 0.12144 3.45016 22 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 23 2.92110 3.54943 0.12144 3.45016 23 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 24 3.05078 2.57105 3.10038 0.18490 24 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 25 0.14697 3.34263 2.77741 3.24076 25 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 26 3.05078 2.57105 3.10038 0.18490 26 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 27 2.92110 3.54943 0.12144 3.45016 27 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 28 3.05078 2.57105 3.10038 0.18490 28 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 29 3.38970 0.13551 3.44098 2.79729 29 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 30 3.38970 0.13551 3.44098 2.79729 30 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 31 3.38970 0.13551 3.44098 2.79729 31 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 32 0.14697 3.34263 2.77741 3.24076 32 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 33 3.05078 2.57105 3.10038 0.18490 33 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 34 3.05078 2.57105 3.10038 0.18490 34 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 35 2.92110 3.54943 0.12144 3.45016 35 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 36 0.14697 3.34263 2.77741 3.24076 36 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 37 2.92110 3.54943 0.12144 3.45016 37 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 38 3.38970 0.13551 3.44098 2.79729 38 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 39 2.92110 3.54943 0.12144 3.45016 39 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 40 3.38970 0.13551 3.44098 2.79729 40 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 41 3.05078 2.57105 3.10038 0.18490 41 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 42 0.14697 3.34263 2.77741 3.24076 42 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 43 3.05078 2.57105 3.10038 0.18490 43 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 44 3.05078 2.57105 3.10038 0.18490 44 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 45 0.14697 3.34263 2.77741 3.24076 45 - - 1.38629 1.38629 1.38629 1.38629 0.01902 3.97169 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:25 2012 NSEQ 3 EFFN 3.000000 CKSUM 1052545355 STATS LOCAL MSV -8.0961 0.72037 STATS LOCAL VITERBI -7.7465 0.72037 STATS LOCAL FORWARD -3.8461 0.72037 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72364 1.14592 1.45979 1.30428 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.30705 0.14631 3.36166 2.73626 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fifty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 11:55:14 2012 NSEQ 19 EFFN 3.363037 CKSUM 828620065 STATS LOCAL MSV -8.0656 0.71932 STATS LOCAL VITERBI -7.8090 0.71932 STATS LOCAL FORWARD -3.9545 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59576 1.19371 1.43722 1.36038 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 0.00000 * 1 3.10158 2.60339 3.14924 0.17660 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 2 3.44789 0.12846 3.49672 2.83975 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 3 3.44789 0.12846 3.49672 2.83975 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 4 2.95646 3.60076 0.11575 3.50679 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 5 2.95646 3.60076 0.11575 3.50679 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 6 0.14021 3.39310 2.81025 3.29598 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 7 3.44789 0.12846 3.49672 2.83975 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 8 2.95646 3.60076 0.11575 3.50679 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 9 0.14021 3.39310 2.81025 3.29598 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 10 3.44789 0.12846 3.49672 2.83975 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 11 0.14021 3.39310 2.81025 3.29598 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 12 3.44789 0.12846 3.49672 2.83975 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 13 3.44789 0.12846 3.49672 2.83975 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 14 3.44789 0.12846 3.49672 2.83975 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 15 3.44789 0.12846 3.49672 2.83975 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 16 3.44789 0.12846 3.49672 2.83975 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 17 2.95646 3.60076 0.11575 3.50679 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 18 3.10158 2.60339 3.14924 0.17660 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 19 2.95646 3.60076 0.11575 3.50679 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 20 0.14021 3.39310 2.81025 3.29598 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 21 3.10158 2.60339 3.14924 0.17660 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 22 0.14021 3.39310 2.81025 3.29598 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 23 2.95646 3.60076 0.11575 3.50679 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 24 3.10158 2.60339 3.14924 0.17660 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 25 0.14021 3.39310 2.81025 3.29598 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 26 3.10158 2.60339 3.14924 0.17660 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 27 2.95646 3.60076 0.11575 3.50679 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 28 3.44789 0.12846 3.49672 2.83975 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 29 3.44789 0.12846 3.49672 2.83975 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 30 3.44789 0.12846 3.49672 2.83975 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 31 3.44789 0.12846 3.49672 2.83975 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 32 0.67914 2.54834 1.12560 2.40486 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 33 3.10158 2.60339 3.14924 0.17660 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 34 3.10158 2.60339 3.14924 0.17660 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 35 2.95646 3.60076 0.11575 3.50679 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 36 0.14021 3.39310 2.81025 3.29598 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 37 2.95646 3.60076 0.11575 3.50679 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 38 3.44789 0.12846 3.49672 2.83975 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 39 2.95646 3.60076 0.11575 3.50679 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 40 3.10158 2.60339 3.14924 0.17660 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 41 3.10158 2.60339 3.14924 0.17660 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 42 0.14021 3.39310 2.81025 3.29598 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 43 3.10158 2.60339 3.14924 0.17660 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 44 3.10158 2.60339 3.14924 0.17660 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01873 4.01873 1.46634 0.26236 1.09861 0.40547 45 3.10158 2.60339 3.14924 0.17660 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00059 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fiftyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 12:54:54 2012 NSEQ 26 EFFN 3.348389 CKSUM 1469927080 STATS LOCAL MSV -7.9913 0.71933 STATS LOCAL VITERBI -7.6268 0.71933 STATS LOCAL FORWARD -4.0718 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47178 1.60222 1.31120 1.20551 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 0.00000 * 1 2.95324 3.59606 0.11625 3.50160 1 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 2 3.44255 0.12909 3.49161 2.83587 2 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 3 0.14082 3.38846 2.80725 3.29090 3 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 4 3.44255 0.12909 3.49161 2.83587 4 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 5 3.44255 0.12909 3.49161 2.83587 5 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 6 3.09689 2.60041 3.14473 0.17735 6 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 7 3.09689 2.60041 3.14473 0.17735 7 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 8 3.09689 2.60041 3.14473 0.17735 8 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 9 3.09689 2.60041 3.14473 0.17735 9 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 10 2.95324 3.59606 0.11625 3.50160 10 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 11 2.95324 3.59606 0.11625 3.50160 11 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 12 3.09689 2.60041 3.14473 0.17735 12 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 13 0.14082 3.38846 2.80725 3.29090 13 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 14 3.09689 2.60041 3.14473 0.17735 14 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 15 3.09689 2.60041 3.14473 0.17735 15 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 16 3.44255 0.12909 3.49161 2.83587 16 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 17 3.44255 0.12909 3.49161 2.83587 17 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 18 2.95324 3.59606 0.11625 3.50160 18 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 19 0.14082 3.38846 2.80725 3.29090 19 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 20 0.14082 3.38846 2.80725 3.29090 20 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 21 0.14082 3.38846 2.80725 3.29090 21 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 22 2.95324 3.59606 0.11625 3.50160 22 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 23 2.95324 3.59606 0.11625 3.50160 23 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 24 3.09689 2.60041 3.14473 0.17735 24 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 25 0.14082 3.38846 2.80725 3.29090 25 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 26 2.81926 1.98984 2.87734 0.29122 26 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 27 2.95324 3.59606 0.11625 3.50160 27 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 28 3.44255 0.12909 3.49161 2.83587 28 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 29 3.44255 0.12909 3.49161 2.83587 29 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 30 3.44255 0.12909 3.49161 2.83587 30 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 31 2.95324 3.59606 0.11625 3.50160 31 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 32 2.95324 3.59606 0.11625 3.50160 32 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 33 3.09689 2.60041 3.14473 0.17735 33 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 34 3.09689 2.60041 3.14473 0.17735 34 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 35 2.95324 3.59606 0.11625 3.50160 35 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 36 0.14082 3.38846 2.80725 3.29090 36 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 37 2.95324 3.59606 0.11625 3.50160 37 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 38 3.09689 2.60041 3.14473 0.17735 38 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 39 0.14082 3.38846 2.80725 3.29090 39 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 40 3.09689 2.60041 3.14473 0.17735 40 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 41 3.09689 2.60041 3.14473 0.17735 41 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 42 0.14082 3.38846 2.80725 3.29090 42 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 43 3.09689 2.60041 3.14473 0.17735 43 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 44 2.95324 3.59606 0.11625 3.50160 44 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 45 0.14082 3.38846 2.80725 3.29090 45 - - 1.38629 1.38629 1.38629 1.38629 0.01852 3.99790 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fiftyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 11:55:50 2012 NSEQ 5 EFFN 3.374023 CKSUM 1967722645 STATS LOCAL MSV -7.4873 0.71933 STATS LOCAL VITERBI -7.8126 0.71933 STATS LOCAL FORWARD -3.9268 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.53388 1.19326 1.49439 1.35990 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 0.00000 * 1 3.10509 2.60562 3.15261 0.17604 1 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 2 3.45188 0.12799 3.50054 2.84264 2 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 3 3.45188 0.12799 3.50054 2.84264 3 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 4 2.95886 3.60427 0.11537 3.51066 4 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 5 1.13967 2.57623 0.66135 2.43199 5 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 6 0.13976 3.39656 2.81250 3.29977 6 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 7 3.45188 0.12799 3.50054 2.84264 7 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 8 2.95886 3.60427 0.11537 3.51066 8 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 9 0.13976 3.39656 2.81250 3.29977 9 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 10 3.45188 0.12799 3.50054 2.84264 10 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 11 0.13976 3.39656 2.81250 3.29977 11 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 12 3.45188 0.12799 3.50054 2.84264 12 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 13 3.45188 0.12799 3.50054 2.84264 13 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 14 3.45188 0.12799 3.50054 2.84264 14 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 15 3.45188 0.12799 3.50054 2.84264 15 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 16 3.45188 0.12799 3.50054 2.84264 16 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 17 2.95886 3.60427 0.11537 3.51066 17 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 18 3.10509 2.60562 3.15261 0.17604 18 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 19 2.95886 3.60427 0.11537 3.51066 19 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 20 0.13976 3.39656 2.81250 3.29977 20 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 21 3.10509 2.60562 3.15261 0.17604 21 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 22 0.13976 3.39656 2.81250 3.29977 22 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 23 2.95886 3.60427 0.11537 3.51066 23 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 24 3.10509 2.60562 3.15261 0.17604 24 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 25 0.13976 3.39656 2.81250 3.29977 25 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 26 3.10509 2.60562 3.15261 0.17604 26 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 27 2.95886 3.60427 0.11537 3.51066 27 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 28 3.45188 0.12799 3.50054 2.84264 28 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 29 3.45188 0.12799 3.50054 2.84264 29 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 30 3.45188 0.12799 3.50054 2.84264 30 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 31 3.45188 0.12799 3.50054 2.84264 31 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 32 0.13976 3.39656 2.81250 3.29977 32 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 33 3.10509 2.60562 3.15261 0.17604 33 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 34 3.10509 2.60562 3.15261 0.17604 34 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 35 2.95886 3.60427 0.11537 3.51066 35 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 36 0.13976 3.39656 2.81250 3.29977 36 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 37 2.95886 3.60427 0.11537 3.51066 37 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 38 3.45188 0.12799 3.50054 2.84264 38 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 39 2.95886 3.60427 0.11537 3.51066 39 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 40 3.10509 2.60562 3.15261 0.17604 40 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 41 3.10509 2.60562 3.15261 0.17604 41 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 42 0.13976 3.39656 2.81250 3.29977 42 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 43 3.10509 2.60562 3.15261 0.17604 43 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 44 3.10509 2.60562 3.15261 0.17604 44 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02070 4.02070 1.46634 0.26236 1.09861 0.40547 45 3.10509 2.60562 3.15261 0.17604 45 - - 1.38629 1.38629 1.38629 1.38629 0.01844 4.00260 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fiftyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 11:55:22 2012 NSEQ 4 EFFN 3.214844 CKSUM 2866287227 STATS LOCAL MSV -7.9504 0.71933 STATS LOCAL VITERBI -7.7053 0.71933 STATS LOCAL FORWARD -3.9958 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55658 1.20087 1.38656 1.43432 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 3.39256 0.13515 3.44371 2.79938 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 3.39256 0.13515 3.44371 2.79938 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 2.92285 3.55196 0.12115 3.45295 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 2.92285 3.55196 0.12115 3.45295 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 0.14663 3.34511 2.77903 3.24347 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 3.39256 0.13515 3.44371 2.79938 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 2.92285 3.55196 0.12115 3.45295 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 0.14663 3.34511 2.77903 3.24347 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.39256 0.13515 3.44371 2.79938 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 0.14663 3.34511 2.77903 3.24347 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 3.39256 0.13515 3.44371 2.79938 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 3.39256 0.13515 3.44371 2.79938 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 3.39256 0.13515 3.44371 2.79938 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.39256 0.13515 3.44371 2.79938 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.39256 0.13515 3.44371 2.79938 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 2.92285 3.55196 0.12115 3.45295 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 3.05326 2.57263 3.10276 0.18448 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 2.92285 3.55196 0.12115 3.45295 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 2.92285 3.55196 0.12115 3.45295 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 0.14663 3.34511 2.77903 3.24347 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 3.05326 2.57263 3.10276 0.18448 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 0.14663 3.34511 2.77903 3.24347 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 2.92285 3.55196 0.12115 3.45295 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 3.05326 2.57263 3.10276 0.18448 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 0.14663 3.34511 2.77903 3.24347 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.05326 2.57263 3.10276 0.18448 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 2.92285 3.55196 0.12115 3.45295 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.39256 0.13515 3.44371 2.79938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 3.39256 0.13515 3.44371 2.79938 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 0.14663 3.34511 2.77903 3.24347 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.05326 2.57263 3.10276 0.18448 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 3.05326 2.57263 3.10276 0.18448 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 2.92285 3.55196 0.12115 3.45295 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 0.14663 3.34511 2.77903 3.24347 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 2.92285 3.55196 0.12115 3.45295 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.39256 0.13515 3.44371 2.79938 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 2.92285 3.55196 0.12115 3.45295 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 3.05326 2.57263 3.10276 0.18448 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 3.05326 2.57263 3.10276 0.18448 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 0.14663 3.34511 2.77903 3.24347 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 3.05326 2.57263 3.10276 0.18448 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 3.05326 2.57263 3.10276 0.18448 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 3.05326 2.57263 3.10276 0.18448 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fiftythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 11:55:39 2012 NSEQ 41 EFFN 3.315735 CKSUM 3014699534 STATS LOCAL MSV -7.9548 0.71932 STATS LOCAL VITERBI -7.8151 0.71932 STATS LOCAL FORWARD -3.9589 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72309 1.19364 1.40154 1.30140 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 0.00000 * 1 3.08636 2.59371 3.13460 0.17904 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 2 3.43054 0.13051 3.48011 2.82713 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 3 3.43054 0.13051 3.48011 2.82713 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 4 2.94597 3.58550 0.11741 3.48993 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 5 2.94597 3.58550 0.11741 3.48993 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 6 0.14219 3.37804 2.80048 3.27949 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 7 3.43054 0.13051 3.48011 2.82713 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 8 2.94597 3.58550 0.11741 3.48993 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 9 0.14219 3.37804 2.80048 3.27949 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 10 3.43054 0.13051 3.48011 2.82713 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 11 3.08636 2.59371 3.13460 0.17904 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 12 3.43054 0.13051 3.48011 2.82713 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 13 3.43054 0.13051 3.48011 2.82713 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 14 3.43054 0.13051 3.48011 2.82713 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 15 3.43054 0.13051 3.48011 2.82713 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 16 3.43054 0.13051 3.48011 2.82713 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 17 2.94597 3.58550 0.11741 3.48993 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 18 3.08636 2.59371 3.13460 0.17904 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 19 2.94597 3.58550 0.11741 3.48993 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 20 0.14219 3.37804 2.80048 3.27949 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 21 3.08636 2.59371 3.13460 0.17904 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 22 0.14219 3.37804 2.80048 3.27949 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 23 2.94597 3.58550 0.11741 3.48993 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 24 3.08636 2.59371 3.13460 0.17904 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 25 0.14219 3.37804 2.80048 3.27949 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 26 3.08636 2.59371 3.13460 0.17904 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 27 2.94597 3.58550 0.11741 3.48993 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 28 3.43054 0.13051 3.48011 2.82713 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 29 3.43054 0.13051 3.48011 2.82713 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 30 3.43054 0.13051 3.48011 2.82713 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 31 3.43054 0.13051 3.48011 2.82713 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 32 1.97476 3.02349 0.27793 2.89632 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 33 3.08636 2.59371 3.13460 0.17904 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 34 3.08636 2.59371 3.13460 0.17904 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 35 2.94597 3.58550 0.11741 3.48993 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 36 0.14219 3.37804 2.80048 3.27949 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 37 2.94597 3.58550 0.11741 3.48993 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 38 3.08636 2.59371 3.13460 0.17904 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 39 2.94597 3.58550 0.11741 3.48993 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 40 3.08636 2.59371 3.13460 0.17904 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 41 3.43054 0.13051 3.48011 2.82713 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 42 0.14219 3.37804 2.80048 3.27949 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 43 3.08636 2.59371 3.13460 0.17904 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 44 3.08636 2.59371 3.13460 0.17904 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01019 4.01019 1.46634 0.26236 1.09861 0.40547 45 3.08636 2.59371 3.13460 0.17904 45 - - 1.38629 1.38629 1.38629 1.38629 0.01864 3.99189 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fiftytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 11:55:31 2012 NSEQ 20 EFFN 3.442383 CKSUM 2115145974 STATS LOCAL MSV -7.3483 0.71933 STATS LOCAL VITERBI -7.8184 0.71933 STATS LOCAL FORWARD -4.0113 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.61756 1.15897 1.41425 1.40772 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 0.00000 * 1 3.12669 2.61934 3.17338 0.17266 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 2 3.47635 0.12517 3.52395 2.86037 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 3 3.47635 0.12517 3.52395 2.86037 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 4 2.97356 3.62574 0.11309 3.53438 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 5 2.97356 3.62574 0.11309 3.53438 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 6 0.13703 3.41783 2.82627 3.32308 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 7 3.47635 0.12517 3.52395 2.86037 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 8 2.97356 3.62574 0.11309 3.53438 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 9 0.13703 3.41783 2.82627 3.32308 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 10 3.47635 0.12517 3.52395 2.86037 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 11 0.13703 3.41783 2.82627 3.32308 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 12 3.47635 0.12517 3.52395 2.86037 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 13 3.47635 0.12517 3.52395 2.86037 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 14 3.47635 0.12517 3.52395 2.86037 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 15 3.47635 0.12517 3.52395 2.86037 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 16 3.47635 0.12517 3.52395 2.86037 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 17 2.97356 3.62574 0.11309 3.53438 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 18 3.12669 2.61934 3.17338 0.17266 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 19 2.97356 3.62574 0.11309 3.53438 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 20 0.13703 3.41783 2.82627 3.32308 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 21 3.12669 2.61934 3.17338 0.17266 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 22 0.13703 3.41783 2.82627 3.32308 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 23 2.97356 3.62574 0.11309 3.53438 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 24 3.12669 2.61934 3.17338 0.17266 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 25 0.13703 3.41783 2.82627 3.32308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 26 3.12669 2.61934 3.17338 0.17266 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 27 2.97356 3.62574 0.11309 3.53438 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 28 3.47635 0.12517 3.52395 2.86037 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 29 3.47635 0.12517 3.52395 2.86037 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 30 3.47635 0.12517 3.52395 2.86037 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 31 3.47635 0.12517 3.52395 2.86037 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 32 1.28718 2.64642 0.55983 2.50423 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 33 3.12669 2.61934 3.17338 0.17266 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 34 3.12669 2.61934 3.17338 0.17266 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 35 2.97356 3.62574 0.11309 3.53438 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 36 0.13703 3.41783 2.82627 3.32308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 37 2.97356 3.62574 0.11309 3.53438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 38 2.56378 0.53516 2.63481 1.32546 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 39 2.97356 3.62574 0.11309 3.53438 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 40 3.12669 2.61934 3.17338 0.17266 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 41 3.47635 0.12517 3.52395 2.86037 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 42 0.13703 3.41783 2.82627 3.32308 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 43 3.12669 2.61934 3.17338 0.17266 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 44 3.12669 2.61934 3.17338 0.17266 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 45 3.12669 2.61934 3.17338 0.17266 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01501 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:45 2012 NSEQ 10 EFFN 3.442383 CKSUM 3202215516 STATS LOCAL MSV -7.6141 0.71932 STATS LOCAL VITERBI -7.8353 0.71932 STATS LOCAL FORWARD -3.8791 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33684 1.22950 1.61287 1.40417 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 0.00000 * 1 3.47635 0.12517 3.52395 2.86037 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 2 0.13703 3.41783 2.82627 3.32308 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 3 3.12669 2.61934 3.17338 0.17266 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 4 3.47635 0.12517 3.52395 2.86037 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 5 2.97356 3.62574 0.11309 3.53438 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 6 0.13703 3.41783 2.82627 3.32308 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 7 3.12669 2.61934 3.17338 0.17266 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 8 3.47635 0.12517 3.52395 2.86037 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 9 3.47635 0.12517 3.52395 2.86037 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 10 3.12669 2.61934 3.17338 0.17266 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 11 3.12669 2.61934 3.17338 0.17266 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 12 0.13703 3.41783 2.82627 3.32308 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 13 2.46479 1.17531 2.53496 0.64058 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 14 3.47635 0.12517 3.52395 2.86037 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 15 3.47635 0.12517 3.52395 2.86037 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 16 0.13703 3.41783 2.82627 3.32308 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 17 2.97356 3.62574 0.11309 3.53438 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 18 2.97356 3.62574 0.11309 3.53438 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 19 0.13703 3.41783 2.82627 3.32308 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 20 0.13703 3.41783 2.82627 3.32308 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 21 3.47635 0.12517 3.52395 2.86037 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 22 2.97356 3.62574 0.11309 3.53438 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 23 0.13703 3.41783 2.82627 3.32308 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 24 3.12669 2.61934 3.17338 0.17266 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 25 0.13703 3.41783 2.82627 3.32308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 26 3.47635 0.12517 3.52395 2.86037 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 27 2.97356 3.62574 0.11309 3.53438 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 28 3.47635 0.12517 3.52395 2.86037 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 29 3.47635 0.12517 3.52395 2.86037 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 30 3.47635 0.12517 3.52395 2.86037 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 31 2.69763 1.70956 2.76025 0.37337 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 32 0.13703 3.41783 2.82627 3.32308 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 33 3.12669 2.61934 3.17338 0.17266 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 34 3.12669 2.61934 3.17338 0.17266 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 35 2.97356 3.62574 0.11309 3.53438 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 36 0.13703 3.41783 2.82627 3.32308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 37 2.97356 3.62574 0.11309 3.53438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 38 3.47635 0.12517 3.52395 2.86037 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 39 2.97356 3.62574 0.11309 3.53438 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 40 3.12669 2.61934 3.17338 0.17266 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 41 3.47635 0.12517 3.52395 2.86037 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 42 0.13703 3.41783 2.82627 3.32308 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 43 3.12669 2.61934 3.17338 0.17266 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 44 3.12669 2.61934 3.17338 0.17266 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 45 0.13703 3.41783 2.82627 3.32308 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01501 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_forty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:17:36 2012 NSEQ 2 EFFN 2.000000 CKSUM 1294487972 STATS LOCAL MSV -7.5495 0.72781 STATS LOCAL VITERBI -8.3582 0.72781 STATS LOCAL FORWARD -3.3793 0.72781 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66359 1.34080 1.21486 1.37771 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 13:07:22 2012 NSEQ 2 EFFN 2.000000 CKSUM 2038431029 STATS LOCAL MSV -7.5779 0.72812 STATS LOCAL VITERBI -8.1520 0.72812 STATS LOCAL FORWARD -3.5212 0.72812 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34474 1.28485 1.50199 1.42706 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.23862 2.84929 2.43386 2.70756 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:47:22 2012 NSEQ 2 EFFN 2.000000 CKSUM 444090394 STATS LOCAL MSV -7.5129 0.72759 STATS LOCAL VITERBI -8.1287 0.72759 STATS LOCAL FORWARD -3.2953 0.72759 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46346 1.14724 1.38328 1.60795 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:47:13 2012 NSEQ 5 EFFN 3.129883 CKSUM 3714924843 STATS LOCAL MSV -8.1501 0.71934 STATS LOCAL VITERBI -7.8142 0.71934 STATS LOCAL FORWARD -3.9377 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40919 1.15917 1.31765 1.74783 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 0.00000 * 1 2.90252 3.52266 0.12454 3.42069 1 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 2 3.35951 0.13934 3.41202 2.77509 2 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 3 0.15061 3.31651 2.76031 3.21221 3 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 4 3.35951 0.13934 3.41202 2.77509 4 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 5 3.35951 0.13934 3.41202 2.77509 5 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 6 3.35951 0.13934 3.41202 2.77509 6 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 7 3.02470 2.55440 3.07528 0.18933 7 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 8 3.35951 0.13934 3.41202 2.77509 8 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 9 3.35951 0.13934 3.41202 2.77509 9 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 10 3.35951 0.13934 3.41202 2.77509 10 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 11 3.35951 0.13934 3.41202 2.77509 11 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 12 0.15061 3.31651 2.76031 3.21221 12 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 13 3.35951 0.13934 3.41202 2.77509 13 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 14 0.15061 3.31651 2.76031 3.21221 14 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 15 0.15061 3.31651 2.76031 3.21221 15 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 16 2.90252 3.52266 0.12454 3.42069 16 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 17 2.90252 3.52266 0.12454 3.42069 17 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 18 2.90252 3.52266 0.12454 3.42069 18 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 19 0.15061 3.31651 2.76031 3.21221 19 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 20 2.90252 3.52266 0.12454 3.42069 20 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 21 0.15061 3.31651 2.76031 3.21221 21 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 22 2.90252 3.52266 0.12454 3.42069 22 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 23 2.90252 3.52266 0.12454 3.42069 23 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 24 3.02470 2.55440 3.07528 0.18933 24 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 25 0.15061 3.31651 2.76031 3.21221 25 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 26 3.02470 2.55440 3.07528 0.18933 26 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 27 2.90252 3.52266 0.12454 3.42069 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 28 3.02470 2.55440 3.07528 0.18933 28 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 29 3.35951 0.13934 3.41202 2.77509 29 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 30 3.35951 0.13934 3.41202 2.77509 30 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 31 3.35951 0.13934 3.41202 2.77509 31 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 32 3.02470 2.55440 3.07528 0.18933 32 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 33 2.90252 3.52266 0.12454 3.42069 33 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 34 3.02470 2.55440 3.07528 0.18933 34 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 35 2.90252 3.52266 0.12454 3.42069 35 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 36 0.15061 3.31651 2.76031 3.21221 36 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 37 2.90252 3.52266 0.12454 3.42069 37 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 38 0.15061 3.31651 2.76031 3.21221 38 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 39 2.90252 3.52266 0.12454 3.42069 39 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 40 3.35951 0.13934 3.41202 2.77509 40 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 41 0.15061 3.31651 2.76031 3.21221 41 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 42 3.35951 0.13934 3.41202 2.77509 42 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 43 3.35951 0.13934 3.41202 2.77509 43 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 44 3.02470 2.55440 3.07528 0.18933 44 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 45 0.15061 3.31651 2.76031 3.21221 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95697 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 15:00:24 2012 NSEQ 51 EFFN 3.495667 CKSUM 201070302 STATS LOCAL MSV -7.3682 0.71931 STATS LOCAL VITERBI -7.7784 0.71931 STATS LOCAL FORWARD -4.2104 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47031 1.38142 1.29850 1.40250 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 0.00000 * 1 3.14327 2.62986 3.18932 0.17011 1 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 2 3.14327 2.62986 3.18932 0.17011 2 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 3 2.98470 3.64207 0.11139 3.55245 3 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 4 3.49501 0.12306 3.54180 2.87385 4 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 5 0.13499 3.43408 2.83677 3.34089 5 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 6 3.49501 0.12306 3.54180 2.87385 6 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 7 3.49501 0.12306 3.54180 2.87385 7 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 8 2.98470 3.64207 0.11139 3.55245 8 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 9 3.49501 0.12306 3.54180 2.87385 9 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 10 3.49501 0.12306 3.54180 2.87385 10 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 11 3.49501 0.12306 3.54180 2.87385 11 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 12 3.14327 2.62986 3.18932 0.17011 12 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 13 3.14327 2.62986 3.18932 0.17011 13 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 14 0.93513 2.16955 2.17919 0.96731 14 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 15 3.14327 2.62986 3.18932 0.17011 15 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 16 2.98470 3.64207 0.11139 3.55245 16 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 17 2.98470 3.64207 0.11139 3.55245 17 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 18 2.98470 3.64207 0.11139 3.55245 18 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 19 0.13499 3.43408 2.83677 3.34089 19 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 20 2.98470 3.64207 0.11139 3.55245 20 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 21 3.14327 2.62986 3.18932 0.17011 21 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 22 2.98470 3.64207 0.11139 3.55245 22 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 23 2.98470 3.64207 0.11139 3.55245 23 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 24 3.14327 2.62986 3.18932 0.17011 24 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 25 0.13499 3.43408 2.83677 3.34089 25 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 26 3.49501 0.12306 3.54180 2.87385 26 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 27 0.52063 2.65612 1.36663 2.51736 27 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 28 3.49501 0.12306 3.54180 2.87385 28 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 29 3.49501 0.12306 3.54180 2.87385 29 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 30 3.49501 0.12306 3.54180 2.87385 30 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 31 2.64272 3.47874 0.14628 3.37928 31 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 32 0.13499 3.43408 2.83677 3.34089 32 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 33 3.14327 2.62986 3.18932 0.17011 33 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 34 3.14327 2.62986 3.18932 0.17011 34 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 35 2.98470 3.64207 0.11139 3.55245 35 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 36 0.13499 3.43408 2.83677 3.34089 36 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 37 2.98470 3.64207 0.11139 3.55245 37 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 38 0.13499 3.43408 2.83677 3.34089 38 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 39 2.98470 3.64207 0.11139 3.55245 39 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 40 3.14327 2.62986 3.18932 0.17011 40 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 41 3.49501 0.12306 3.54180 2.87385 41 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 42 0.13499 3.43408 2.83677 3.34089 42 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 43 3.14327 2.62986 3.18932 0.17011 43 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 44 0.13499 3.43408 2.83677 3.34089 44 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04229 4.04229 1.46634 0.26236 1.09861 0.40547 45 0.13499 3.43408 2.83677 3.34089 45 - - 1.38629 1.38629 1.38629 1.38629 0.01803 4.02458 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:30:02 2012 NSEQ 15 EFFN 3.226318 CKSUM 297855115 STATS LOCAL MSV -8.0137 0.71932 STATS LOCAL VITERBI -7.6666 0.71932 STATS LOCAL FORWARD -4.1067 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47812 1.20187 1.38574 1.50884 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 0.00000 * 1 3.39694 0.13461 3.44792 2.80259 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 2 0.14611 3.34891 2.78151 3.24762 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 3 3.05707 2.57506 3.10643 0.18384 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 4 3.39694 0.13461 3.44792 2.80259 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 5 2.92553 3.55584 0.12071 3.45723 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 6 0.14611 3.34891 2.78151 3.24762 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 7 2.92553 3.55584 0.12071 3.45723 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 8 3.39694 0.13461 3.44792 2.80259 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 9 3.05707 2.57506 3.10643 0.18384 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 10 3.05707 2.57506 3.10643 0.18384 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 11 3.05707 2.57506 3.10643 0.18384 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 12 2.92553 3.55584 0.12071 3.45723 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 13 3.39694 0.13461 3.44792 2.80259 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 14 3.39694 0.13461 3.44792 2.80259 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 15 3.39694 0.13461 3.44792 2.80259 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 16 0.14611 3.34891 2.78151 3.24762 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 17 0.14611 3.34891 2.78151 3.24762 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 18 2.92553 3.55584 0.12071 3.45723 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 19 3.39694 0.13461 3.44792 2.80259 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 20 0.14611 3.34891 2.78151 3.24762 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 21 3.39694 0.13461 3.44792 2.80259 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 22 2.92553 3.55584 0.12071 3.45723 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 23 0.14611 3.34891 2.78151 3.24762 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 24 3.05707 2.57506 3.10643 0.18384 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 25 0.14611 3.34891 2.78151 3.24762 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 26 3.39694 0.13461 3.44792 2.80259 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 27 2.92553 3.55584 0.12071 3.45723 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 28 3.39694 0.13461 3.44792 2.80259 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 29 2.92553 3.55584 0.12071 3.45723 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 30 3.05707 2.57506 3.10643 0.18384 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 31 2.87955 2.17293 2.93512 0.25248 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 32 2.92553 3.55584 0.12071 3.45723 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 33 0.14611 3.34891 2.78151 3.24762 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 34 3.05707 2.57506 3.10643 0.18384 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 35 3.39694 0.13461 3.44792 2.80259 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 36 0.14611 3.34891 2.78151 3.24762 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 37 3.39694 0.13461 3.44792 2.80259 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 38 3.39694 0.13461 3.44792 2.80259 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 39 2.92553 3.55584 0.12071 3.45723 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 40 3.39694 0.13461 3.44792 2.80259 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 41 2.92553 3.55584 0.12071 3.45723 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 42 2.92553 3.55584 0.12071 3.45723 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 43 3.05707 2.57506 3.10643 0.18384 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 44 3.05707 2.57506 3.10643 0.18384 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 45 0.14611 3.34891 2.78151 3.24762 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97525 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:53:39 2012 NSEQ 50 EFFN 3.207397 CKSUM 3396287535 STATS LOCAL MSV -8.1714 0.71932 STATS LOCAL VITERBI -7.6068 0.71932 STATS LOCAL FORWARD -4.1918 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.48059 1.14781 1.45890 1.50206 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 0.00000 * 1 3.38970 0.13551 3.44098 2.79729 1 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 2 0.14697 3.34263 2.77741 3.24076 2 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 3 3.38970 0.13551 3.44098 2.79729 3 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 4 3.38970 0.13551 3.44098 2.79729 4 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 5 2.92110 3.54943 0.12144 3.45016 5 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 6 0.14697 3.34263 2.77741 3.24076 6 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 7 2.92110 3.54943 0.12144 3.45016 7 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 8 3.38970 0.13551 3.44098 2.79729 8 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 9 3.05078 2.57105 3.10038 0.18490 9 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 10 3.38970 0.13551 3.44098 2.79729 10 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 11 3.05078 2.57105 3.10038 0.18490 11 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 12 0.14697 3.34263 2.77741 3.24076 12 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 13 3.38970 0.13551 3.44098 2.79729 13 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 14 3.38970 0.13551 3.44098 2.79729 14 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 15 3.38970 0.13551 3.44098 2.79729 15 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 16 2.92110 3.54943 0.12144 3.45016 16 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 17 0.14697 3.34263 2.77741 3.24076 17 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 18 2.92110 3.54943 0.12144 3.45016 18 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 19 3.38970 0.13551 3.44098 2.79729 19 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 20 0.14697 3.34263 2.77741 3.24076 20 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 21 3.38970 0.13551 3.44098 2.79729 21 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 22 2.92110 3.54943 0.12144 3.45016 22 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 23 2.92110 3.54943 0.12144 3.45016 23 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 24 3.05078 2.57105 3.10038 0.18490 24 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 25 0.14697 3.34263 2.77741 3.24076 25 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 26 3.05078 2.57105 3.10038 0.18490 26 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 27 2.92110 3.54943 0.12144 3.45016 27 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 28 3.05078 2.57105 3.10038 0.18490 28 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 29 3.38970 0.13551 3.44098 2.79729 29 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 30 3.38970 0.13551 3.44098 2.79729 30 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 31 3.38970 0.13551 3.44098 2.79729 31 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 32 0.14697 3.34263 2.77741 3.24076 32 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 33 3.05078 2.57105 3.10038 0.18490 33 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 34 3.05078 2.57105 3.10038 0.18490 34 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 35 2.92110 3.54943 0.12144 3.45016 35 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 36 0.14697 3.34263 2.77741 3.24076 36 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 37 2.92110 3.54943 0.12144 3.45016 37 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 38 3.38970 0.13551 3.44098 2.79729 38 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 39 2.92110 3.54943 0.12144 3.45016 39 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 40 3.38970 0.13551 3.44098 2.79729 40 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 41 3.05078 2.57105 3.10038 0.18490 41 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 42 0.14697 3.34263 2.77741 3.24076 42 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 43 3.05078 2.57105 3.10038 0.18490 43 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 44 3.05078 2.57105 3.10038 0.18490 44 - - 1.38629 1.38629 1.38629 1.38629 0.03769 3.99035 3.99035 1.46634 0.26236 1.09861 0.40547 45 0.14697 3.34263 2.77741 3.24076 45 - - 1.38629 1.38629 1.38629 1.38629 0.01902 3.97169 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 9 13:05:06 2012 NSEQ 9 EFFN 3.291504 CKSUM 447960315 STATS LOCAL MSV -8.0375 0.71931 STATS LOCAL VITERBI -7.7666 0.71931 STATS LOCAL FORWARD -4.4115 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81791 1.60663 1.14058 1.14747 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 0.00000 * 1 3.07849 2.58870 3.12703 0.18032 1 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 2 2.94052 3.57756 0.11828 3.48118 2 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 3 3.42154 0.13160 3.47149 2.82057 3 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 4 0.14323 3.37023 2.79540 3.27094 4 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 5 3.42154 0.13160 3.47149 2.82057 5 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 6 3.07849 2.58870 3.12703 0.18032 6 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 7 2.94052 3.57756 0.11828 3.48118 7 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 8 0.14323 3.37023 2.79540 3.27094 8 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 9 3.42154 0.13160 3.47149 2.82057 9 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 10 3.07849 2.58870 3.12703 0.18032 10 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 11 3.42154 0.13160 3.47149 2.82057 11 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 12 3.42154 0.13160 3.47149 2.82057 12 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 13 3.42154 0.13160 3.47149 2.82057 13 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 14 3.07849 2.58870 3.12703 0.18032 14 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 15 3.07849 2.58870 3.12703 0.18032 15 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 16 2.94052 3.57756 0.11828 3.48118 16 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 17 2.94052 3.57756 0.11828 3.48118 17 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 18 2.94052 3.57756 0.11828 3.48118 18 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 19 2.94052 3.57756 0.11828 3.48118 19 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 20 3.07849 2.58870 3.12703 0.18032 20 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 21 3.07849 2.58870 3.12703 0.18032 21 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 22 2.94052 3.57756 0.11828 3.48118 22 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 23 2.94052 3.57756 0.11828 3.48118 23 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 24 3.07849 2.58870 3.12703 0.18032 24 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 25 0.14323 3.37023 2.79540 3.27094 25 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 26 3.07849 2.58870 3.12703 0.18032 26 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 27 2.94052 3.57756 0.11828 3.48118 27 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 28 3.07849 2.58870 3.12703 0.18032 28 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 29 2.94052 3.57756 0.11828 3.48118 29 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 30 2.94052 3.57756 0.11828 3.48118 30 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 31 2.94052 3.57756 0.11828 3.48118 31 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 32 0.14323 3.37023 2.79540 3.27094 32 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 33 3.07849 2.58870 3.12703 0.18032 33 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 34 3.07849 2.58870 3.12703 0.18032 34 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 35 2.94052 3.57756 0.11828 3.48118 35 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 36 0.14323 3.37023 2.79540 3.27094 36 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 37 2.94052 3.57756 0.11828 3.48118 37 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 38 3.42154 0.13160 3.47149 2.82057 38 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 39 2.94052 3.57756 0.11828 3.48118 39 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 40 3.07849 2.58870 3.12703 0.18032 40 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 41 3.42154 0.13160 3.47149 2.82057 41 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 42 0.14323 3.37023 2.79540 3.27094 42 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 43 3.07849 2.58870 3.12703 0.18032 43 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 44 3.07849 2.58870 3.12703 0.18032 44 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 45 3.07849 2.58870 3.12703 0.18032 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98741 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:47:03 2012 NSEQ 14 EFFN 3.209473 CKSUM 1915176416 STATS LOCAL MSV -8.0420 0.71931 STATS LOCAL VITERBI -7.6843 0.71931 STATS LOCAL FORWARD -3.8892 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47838 1.11688 1.31754 1.73216 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 0.00000 * 1 2.92158 3.55014 0.12136 3.45094 1 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 2 3.39050 0.13541 3.44174 2.79787 2 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 3 0.14687 3.34333 2.77786 3.24152 3 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 4 3.39050 0.13541 3.44174 2.79787 4 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 5 3.39050 0.13541 3.44174 2.79787 5 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 6 3.39050 0.13541 3.44174 2.79787 6 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 7 3.05148 2.57149 3.10104 0.18478 7 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 8 3.39050 0.13541 3.44174 2.79787 8 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 9 3.39050 0.13541 3.44174 2.79787 9 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 10 3.05148 2.57149 3.10104 0.18478 10 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 11 3.39050 0.13541 3.44174 2.79787 11 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 12 0.14687 3.34333 2.77786 3.24152 12 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 13 3.39050 0.13541 3.44174 2.79787 13 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 14 0.14687 3.34333 2.77786 3.24152 14 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 15 0.14687 3.34333 2.77786 3.24152 15 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 16 2.92158 3.55014 0.12136 3.45094 16 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 17 2.92158 3.55014 0.12136 3.45094 17 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 18 2.92158 3.55014 0.12136 3.45094 18 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 19 0.14687 3.34333 2.77786 3.24152 19 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 20 2.92158 3.55014 0.12136 3.45094 20 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 21 0.14687 3.34333 2.77786 3.24152 21 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 22 2.92158 3.55014 0.12136 3.45094 22 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 23 2.92158 3.55014 0.12136 3.45094 23 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 24 3.05148 2.57149 3.10104 0.18478 24 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 25 0.14687 3.34333 2.77786 3.24152 25 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 26 3.05148 2.57149 3.10104 0.18478 26 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 27 2.92158 3.55014 0.12136 3.45094 27 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 28 2.68235 0.39803 2.75144 1.62901 28 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 29 3.39050 0.13541 3.44174 2.79787 29 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 30 3.39050 0.13541 3.44174 2.79787 30 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 31 3.39050 0.13541 3.44174 2.79787 31 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 32 3.05148 2.57149 3.10104 0.18478 32 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 33 2.92158 3.55014 0.12136 3.45094 33 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 34 3.05148 2.57149 3.10104 0.18478 34 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 35 2.92158 3.55014 0.12136 3.45094 35 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 36 0.14687 3.34333 2.77786 3.24152 36 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 37 2.92158 3.55014 0.12136 3.45094 37 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 38 3.39050 0.13541 3.44174 2.79787 38 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 39 2.92158 3.55014 0.12136 3.45094 39 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 40 3.39050 0.13541 3.44174 2.79787 40 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 41 0.14687 3.34333 2.77786 3.24152 41 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 42 3.39050 0.13541 3.44174 2.79787 42 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 43 3.39050 0.13541 3.44174 2.79787 43 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 44 3.05148 2.57149 3.10104 0.18478 44 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99074 3.99074 1.46634 0.26236 1.09861 0.40547 45 0.14687 3.34333 2.77786 3.24152 45 - - 1.38629 1.38629 1.38629 1.38629 0.01901 3.97208 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fortytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:44:08 2012 NSEQ 3 EFFN 3.000000 CKSUM 3660751287 STATS LOCAL MSV -8.1845 0.71983 STATS LOCAL VITERBI -7.8632 0.71983 STATS LOCAL FORWARD -3.7067 0.71983 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55587 1.05969 1.32233 1.73774 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.15719 3.27118 2.73043 3.16274 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 3.30705 0.14631 3.36166 2.73626 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 3.30705 0.14631 3.36166 2.73626 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:38 2012 NSEQ 143 EFFN 3.277374 CKSUM 1216097003 STATS LOCAL MSV -8.0025 0.71931 STATS LOCAL VITERBI -7.9573 0.71931 STATS LOCAL FORWARD -3.8292 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34004 1.15935 1.53083 1.56966 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 0.00000 * 1 3.41626 0.13224 3.46643 2.81672 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 2 0.14384 3.36565 2.79242 3.26593 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 3 3.07388 2.58577 3.12260 0.18107 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 4 3.41626 0.13224 3.46643 2.81672 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 5 2.93731 3.57290 0.11880 3.47604 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 6 0.14384 3.36565 2.79242 3.26593 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 7 2.93731 3.57290 0.11880 3.47604 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 8 3.41626 0.13224 3.46643 2.81672 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 9 3.41626 0.13224 3.46643 2.81672 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 10 3.07388 2.58577 3.12260 0.18107 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 11 3.07388 2.58577 3.12260 0.18107 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 12 0.14384 3.36565 2.79242 3.26593 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 13 2.52004 0.32226 2.77460 2.01997 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 14 3.41626 0.13224 3.46643 2.81672 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 15 3.41626 0.13224 3.46643 2.81672 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 16 0.14384 3.36565 2.79242 3.26593 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 17 2.93731 3.57290 0.11880 3.47604 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 18 2.93731 3.57290 0.11880 3.47604 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 19 0.14384 3.36565 2.79242 3.26593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 20 0.14384 3.36565 2.79242 3.26593 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 21 3.41626 0.13224 3.46643 2.81672 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 22 2.93731 3.57290 0.11880 3.47604 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 23 0.14384 3.36565 2.79242 3.26593 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 24 3.07388 2.58577 3.12260 0.18107 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 25 0.14384 3.36565 2.79242 3.26593 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 26 3.41626 0.13224 3.46643 2.81672 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 27 2.93731 3.57290 0.11880 3.47604 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 28 3.41626 0.13224 3.46643 2.81672 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 29 3.41626 0.13224 3.46643 2.81672 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 30 3.41626 0.13224 3.46643 2.81672 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 31 3.41626 0.13224 3.46643 2.81672 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 32 0.14384 3.36565 2.79242 3.26593 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 33 3.07388 2.58577 3.12260 0.18107 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 34 3.07388 2.58577 3.12260 0.18107 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 35 2.93731 3.57290 0.11880 3.47604 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 36 0.14384 3.36565 2.79242 3.26593 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 37 2.93731 3.57290 0.11880 3.47604 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 38 3.41626 0.13224 3.46643 2.81672 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 39 2.93731 3.57290 0.11880 3.47604 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 40 3.07388 2.58577 3.12260 0.18107 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 41 3.41626 0.13224 3.46643 2.81672 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 42 0.14384 3.36565 2.79242 3.26593 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 43 3.07388 2.58577 3.12260 0.18107 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 44 3.07388 2.58577 3.12260 0.18107 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 45 0.14384 3.36565 2.79242 3.26593 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98479 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:17 2012 NSEQ 6 EFFN 3.249023 CKSUM 2990586436 STATS LOCAL MSV -8.2300 0.71932 STATS LOCAL VITERBI -7.5586 0.71932 STATS LOCAL FORWARD -4.2021 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34169 1.25857 1.53072 1.43483 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 * 1 3.40558 0.13354 3.45619 2.80891 1 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 2 0.14509 3.35639 2.78639 3.25580 2 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 3 3.40558 0.13354 3.45619 2.80891 3 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 4 3.40558 0.13354 3.45619 2.80891 4 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 5 2.93080 3.56347 0.11985 3.46564 5 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 6 0.14509 3.35639 2.78639 3.25580 6 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 7 2.93080 3.56347 0.11985 3.46564 7 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 8 2.93080 3.56347 0.11985 3.46564 8 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 9 0.14509 3.35639 2.78639 3.25580 9 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 10 3.06457 2.57984 3.11364 0.18260 10 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 11 3.06457 2.57984 3.11364 0.18260 11 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 12 2.93080 3.56347 0.11985 3.46564 12 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 13 3.40558 0.13354 3.45619 2.80891 13 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 14 3.40558 0.13354 3.45619 2.80891 14 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 15 3.40558 0.13354 3.45619 2.80891 15 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 16 0.14509 3.35639 2.78639 3.25580 16 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 17 3.06457 2.57984 3.11364 0.18260 17 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 18 3.40558 0.13354 3.45619 2.80891 18 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 19 3.40558 0.13354 3.45619 2.80891 19 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 20 0.14509 3.35639 2.78639 3.25580 20 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 21 3.40558 0.13354 3.45619 2.80891 21 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 22 2.93080 3.56347 0.11985 3.46564 22 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 23 2.93080 3.56347 0.11985 3.46564 23 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 24 3.06457 2.57984 3.11364 0.18260 24 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 25 0.14509 3.35639 2.78639 3.25580 25 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 26 3.06457 2.57984 3.11364 0.18260 26 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 27 0.14509 3.35639 2.78639 3.25580 27 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 28 3.40558 0.13354 3.45619 2.80891 28 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 29 3.40558 0.13354 3.45619 2.80891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 30 0.14509 3.35639 2.78639 3.25580 30 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 31 3.40558 0.13354 3.45619 2.80891 31 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 32 0.14509 3.35639 2.78639 3.25580 32 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 33 3.06457 2.57984 3.11364 0.18260 33 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 34 3.06457 2.57984 3.11364 0.18260 34 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 35 2.93080 3.56347 0.11985 3.46564 35 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 36 0.14509 3.35639 2.78639 3.25580 36 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 37 2.93080 3.56347 0.11985 3.46564 37 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 38 3.06457 2.57984 3.11364 0.18260 38 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 39 2.93080 3.56347 0.11985 3.46564 39 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 40 3.06457 2.57984 3.11364 0.18260 40 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 41 3.40558 0.13354 3.45619 2.80891 41 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 42 0.14509 3.35639 2.78639 3.25580 42 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 43 3.06457 2.57984 3.11364 0.18260 43 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 44 3.06457 2.57984 3.11364 0.18260 44 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 45 0.14509 3.35639 2.78639 3.25580 45 - - 1.38629 1.38629 1.38629 1.38629 0.01887 3.97950 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:19 2012 NSEQ 20 EFFN 3.364258 CKSUM 1686556577 STATS LOCAL MSV -8.1341 0.71933 STATS LOCAL VITERBI -7.7337 0.71933 STATS LOCAL FORWARD -3.8665 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40491 1.22642 1.53082 1.40685 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 0.00000 * 1 3.44834 0.12841 3.49715 2.84007 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 2 0.14016 3.39348 2.81050 3.29640 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 3 3.10197 2.60364 3.14962 0.17654 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 4 3.44834 0.12841 3.49715 2.84007 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 5 2.95673 3.60115 0.11570 3.50722 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 6 0.14016 3.39348 2.81050 3.29640 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 7 2.95673 3.60115 0.11570 3.50722 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 8 3.44834 0.12841 3.49715 2.84007 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 9 3.10197 2.60364 3.14962 0.17654 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 10 3.10197 2.60364 3.14962 0.17654 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 11 3.10197 2.60364 3.14962 0.17654 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 12 2.95673 3.60115 0.11570 3.50722 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 13 3.44834 0.12841 3.49715 2.84007 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 14 3.44834 0.12841 3.49715 2.84007 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 15 3.44834 0.12841 3.49715 2.84007 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 16 0.14016 3.39348 2.81050 3.29640 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 17 0.14016 3.39348 2.81050 3.29640 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 18 2.95673 3.60115 0.11570 3.50722 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 19 3.44834 0.12841 3.49715 2.84007 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 20 0.14016 3.39348 2.81050 3.29640 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 21 3.44834 0.12841 3.49715 2.84007 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 22 2.95673 3.60115 0.11570 3.50722 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 23 0.14016 3.39348 2.81050 3.29640 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 24 3.10197 2.60364 3.14962 0.17654 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 25 0.14016 3.39348 2.81050 3.29640 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 26 3.10197 2.60364 3.14962 0.17654 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 27 2.95673 3.60115 0.11570 3.50722 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 28 2.44045 0.73552 2.51288 1.04246 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 29 3.44834 0.12841 3.49715 2.84007 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 30 3.44834 0.12841 3.49715 2.84007 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 31 3.44834 0.12841 3.49715 2.84007 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 32 0.14016 3.39348 2.81050 3.29640 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 33 3.10197 2.60364 3.14962 0.17654 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 34 3.10197 2.60364 3.14962 0.17654 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 35 2.95673 3.60115 0.11570 3.50722 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 36 0.14016 3.39348 2.81050 3.29640 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 37 2.95673 3.60115 0.11570 3.50722 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 38 3.44834 0.12841 3.49715 2.84007 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 39 2.95673 3.60115 0.11570 3.50722 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 40 3.10197 2.60364 3.14962 0.17654 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 41 3.44834 0.12841 3.49715 2.84007 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 42 0.14016 3.39348 2.81050 3.29640 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 43 3.10197 2.60364 3.14962 0.17654 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 44 3.10197 2.60364 3.14962 0.17654 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01895 4.01895 1.46634 0.26236 1.09861 0.40547 45 0.14016 3.39348 2.81050 3.29640 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00081 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:08 2012 NSEQ 5 EFFN 3.129883 CKSUM 3714924843 STATS LOCAL MSV -8.1501 0.71934 STATS LOCAL VITERBI -7.8142 0.71934 STATS LOCAL FORWARD -3.9377 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40919 1.15917 1.31765 1.74783 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 0.00000 * 1 2.90252 3.52266 0.12454 3.42069 1 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 2 3.35951 0.13934 3.41202 2.77509 2 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 3 0.15061 3.31651 2.76031 3.21221 3 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 4 3.35951 0.13934 3.41202 2.77509 4 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 5 3.35951 0.13934 3.41202 2.77509 5 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 6 3.35951 0.13934 3.41202 2.77509 6 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 7 3.02470 2.55440 3.07528 0.18933 7 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 8 3.35951 0.13934 3.41202 2.77509 8 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 9 3.35951 0.13934 3.41202 2.77509 9 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 10 3.35951 0.13934 3.41202 2.77509 10 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 11 3.35951 0.13934 3.41202 2.77509 11 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 12 0.15061 3.31651 2.76031 3.21221 12 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 13 3.35951 0.13934 3.41202 2.77509 13 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 14 0.15061 3.31651 2.76031 3.21221 14 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 15 0.15061 3.31651 2.76031 3.21221 15 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 16 2.90252 3.52266 0.12454 3.42069 16 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 17 2.90252 3.52266 0.12454 3.42069 17 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 18 2.90252 3.52266 0.12454 3.42069 18 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 19 0.15061 3.31651 2.76031 3.21221 19 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 20 2.90252 3.52266 0.12454 3.42069 20 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 21 0.15061 3.31651 2.76031 3.21221 21 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 22 2.90252 3.52266 0.12454 3.42069 22 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 23 2.90252 3.52266 0.12454 3.42069 23 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 24 3.02470 2.55440 3.07528 0.18933 24 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 25 0.15061 3.31651 2.76031 3.21221 25 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 26 3.02470 2.55440 3.07528 0.18933 26 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 27 2.90252 3.52266 0.12454 3.42069 27 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 28 3.02470 2.55440 3.07528 0.18933 28 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 29 3.35951 0.13934 3.41202 2.77509 29 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 30 3.35951 0.13934 3.41202 2.77509 30 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 31 3.35951 0.13934 3.41202 2.77509 31 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 32 3.02470 2.55440 3.07528 0.18933 32 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 33 2.90252 3.52266 0.12454 3.42069 33 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 34 3.02470 2.55440 3.07528 0.18933 34 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 35 2.90252 3.52266 0.12454 3.42069 35 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 36 0.15061 3.31651 2.76031 3.21221 36 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 37 2.90252 3.52266 0.12454 3.42069 37 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 38 0.15061 3.31651 2.76031 3.21221 38 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 39 2.90252 3.52266 0.12454 3.42069 39 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 40 3.35951 0.13934 3.41202 2.77509 40 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 41 0.15061 3.31651 2.76031 3.21221 41 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 42 3.35951 0.13934 3.41202 2.77509 42 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 43 3.35951 0.13934 3.41202 2.77509 43 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 44 3.02470 2.55440 3.07528 0.18933 44 - - 1.38629 1.38629 1.38629 1.38629 0.03825 3.97591 3.97591 1.46634 0.26236 1.09861 0.40547 45 0.15061 3.31651 2.76031 3.21221 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95697 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:06 2012 NSEQ 93 EFFN 3.204254 CKSUM 1376255212 STATS LOCAL MSV -8.1180 0.71931 STATS LOCAL VITERBI -7.6518 0.71931 STATS LOCAL FORWARD -4.1483 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72511 1.09620 1.32910 1.50063 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 0.00000 * 1 0.14711 3.34159 2.77673 3.23962 1 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 2 3.38849 0.13566 3.43982 2.79640 2 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 3 3.38849 0.13566 3.43982 2.79640 3 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 4 2.92036 3.54836 0.12156 3.44899 4 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 5 3.38849 0.13566 3.43982 2.79640 5 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 6 2.92036 3.54836 0.12156 3.44899 6 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 7 3.38849 0.13566 3.43982 2.79640 7 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 8 3.38849 0.13566 3.43982 2.79640 8 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 9 3.38849 0.13566 3.43982 2.79640 9 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 10 3.04974 2.57038 3.09937 0.18507 10 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 11 0.14711 3.34159 2.77673 3.23962 11 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 12 0.14711 3.34159 2.77673 3.23962 12 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 13 0.14711 3.34159 2.77673 3.23962 13 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 14 3.38849 0.13566 3.43982 2.79640 14 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 15 3.38849 0.13566 3.43982 2.79640 15 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 16 2.92036 3.54836 0.12156 3.44899 16 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 17 2.92036 3.54836 0.12156 3.44899 17 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 18 3.38849 0.13566 3.43982 2.79640 18 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 19 3.04974 2.57038 3.09937 0.18507 19 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 20 2.92036 3.54836 0.12156 3.44899 20 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 21 3.38849 0.13566 3.43982 2.79640 21 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 22 2.92036 3.54836 0.12156 3.44899 22 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 23 2.92036 3.54836 0.12156 3.44899 23 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 24 3.04974 2.57038 3.09937 0.18507 24 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 25 0.14711 3.34159 2.77673 3.23962 25 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 26 3.04974 2.57038 3.09937 0.18507 26 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 27 2.92036 3.54836 0.12156 3.44899 27 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 28 3.38849 0.13566 3.43982 2.79640 28 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 29 3.38849 0.13566 3.43982 2.79640 29 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 30 3.38849 0.13566 3.43982 2.79640 30 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 31 3.38849 0.13566 3.43982 2.79640 31 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 32 3.04974 2.57038 3.09937 0.18507 32 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 33 3.04974 2.57038 3.09937 0.18507 33 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 34 3.04974 2.57038 3.09937 0.18507 34 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 35 2.92036 3.54836 0.12156 3.44899 35 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 36 0.14711 3.34159 2.77673 3.23962 36 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 37 2.92036 3.54836 0.12156 3.44899 37 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 38 3.38849 0.13566 3.43982 2.79640 38 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 39 2.92036 3.54836 0.12156 3.44899 39 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 40 3.04974 2.57038 3.09937 0.18507 40 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 41 3.38849 0.13566 3.43982 2.79640 41 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 42 0.14711 3.34159 2.77673 3.23962 42 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 43 3.04974 2.57038 3.09937 0.18507 43 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 44 3.04974 2.57038 3.09937 0.18507 44 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98977 3.98977 1.46634 0.26236 1.09861 0.40547 45 2.46029 3.30634 0.17800 3.19434 45 - - 1.38629 1.38629 1.38629 1.38629 0.01903 3.97109 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:59 2012 NSEQ 23 EFFN 3.225952 CKSUM 63160430 STATS LOCAL MSV -7.9817 0.71932 STATS LOCAL VITERBI -7.8714 0.71932 STATS LOCAL FORWARD -3.9916 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34283 1.20350 1.53189 1.50227 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 0.00000 * 1 3.39681 0.13462 3.44779 2.80249 1 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 2 0.14612 3.34879 2.78143 3.24749 2 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 3 3.05695 2.57498 3.10631 0.18387 3 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 4 3.39681 0.13462 3.44779 2.80249 4 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 5 2.92544 3.55572 0.12073 3.45709 5 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 6 0.14612 3.34879 2.78143 3.24749 6 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 7 3.05695 2.57498 3.10631 0.18387 7 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 8 3.39681 0.13462 3.44779 2.80249 8 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 9 3.39681 0.13462 3.44779 2.80249 9 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 10 3.05695 2.57498 3.10631 0.18387 10 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 11 3.05695 2.57498 3.10631 0.18387 11 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 12 0.14612 3.34879 2.78143 3.24749 12 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 13 0.14612 3.34879 2.78143 3.24749 13 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 14 3.39681 0.13462 3.44779 2.80249 14 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 15 3.39681 0.13462 3.44779 2.80249 15 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 16 2.92544 3.55572 0.12073 3.45709 16 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 17 2.92544 3.55572 0.12073 3.45709 17 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 18 2.92544 3.55572 0.12073 3.45709 18 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 19 0.14612 3.34879 2.78143 3.24749 19 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 20 0.14612 3.34879 2.78143 3.24749 20 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 21 3.39681 0.13462 3.44779 2.80249 21 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 22 2.92544 3.55572 0.12073 3.45709 22 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 23 0.14612 3.34879 2.78143 3.24749 23 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 24 3.05695 2.57498 3.10631 0.18387 24 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 25 0.14612 3.34879 2.78143 3.24749 25 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 26 3.39681 0.13462 3.44779 2.80249 26 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 27 2.92544 3.55572 0.12073 3.45709 27 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 28 3.39681 0.13462 3.44779 2.80249 28 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 29 3.39681 0.13462 3.44779 2.80249 29 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 30 3.39681 0.13462 3.44779 2.80249 30 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 31 3.39681 0.13462 3.44779 2.80249 31 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 32 0.14612 3.34879 2.78143 3.24749 32 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 33 3.05695 2.57498 3.10631 0.18387 33 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 34 3.05695 2.57498 3.10631 0.18387 34 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 35 2.92544 3.55572 0.12073 3.45709 35 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 36 0.14612 3.34879 2.78143 3.24749 36 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 37 2.92544 3.55572 0.12073 3.45709 37 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 38 3.39681 0.13462 3.44779 2.80249 38 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 39 2.92544 3.55572 0.12073 3.45709 39 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 40 3.05695 2.57498 3.10631 0.18387 40 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 41 3.39681 0.13462 3.44779 2.80249 41 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 42 0.14612 3.34879 2.78143 3.24749 42 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 43 3.05695 2.57498 3.10631 0.18387 43 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 44 3.05695 2.57498 3.10631 0.18387 44 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99378 3.99378 1.46634 0.26236 1.09861 0.40547 45 0.14612 3.34879 2.78143 3.24749 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97518 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:41 2012 NSEQ 39 EFFN 3.127808 CKSUM 3719870374 STATS LOCAL MSV -8.2144 0.71931 STATS LOCAL VITERBI -7.8456 0.71931 STATS LOCAL FORWARD -3.7513 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55799 1.05598 1.32230 1.74258 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 0.00000 * 1 2.90201 3.52193 0.12462 3.41989 1 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 2 3.35869 0.13945 3.41123 2.77449 2 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 3 0.15071 3.31580 2.75984 3.21143 3 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 4 3.35869 0.13945 3.41123 2.77449 4 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 5 3.35869 0.13945 3.41123 2.77449 5 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 6 3.35869 0.13945 3.41123 2.77449 6 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 7 3.02400 2.55395 3.07460 0.18945 7 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 8 3.35869 0.13945 3.41123 2.77449 8 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 9 3.35869 0.13945 3.41123 2.77449 9 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 10 3.35869 0.13945 3.41123 2.77449 10 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 11 3.35869 0.13945 3.41123 2.77449 11 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 12 0.15071 3.31580 2.75984 3.21143 12 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 13 3.35869 0.13945 3.41123 2.77449 13 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 14 0.15071 3.31580 2.75984 3.21143 14 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 15 0.15071 3.31580 2.75984 3.21143 15 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 16 2.90201 3.52193 0.12462 3.41989 16 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 17 2.90201 3.52193 0.12462 3.41989 17 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 18 2.90201 3.52193 0.12462 3.41989 18 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 19 0.15071 3.31580 2.75984 3.21143 19 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 20 2.90201 3.52193 0.12462 3.41989 20 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 21 3.02400 2.55395 3.07460 0.18945 21 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 22 2.90201 3.52193 0.12462 3.41989 22 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 23 2.90201 3.52193 0.12462 3.41989 23 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 24 3.02400 2.55395 3.07460 0.18945 24 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 25 0.15071 3.31580 2.75984 3.21143 25 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 26 3.02400 2.55395 3.07460 0.18945 26 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 27 2.90201 3.52193 0.12462 3.41989 27 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 28 3.35869 0.13945 3.41123 2.77449 28 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 29 3.35869 0.13945 3.41123 2.77449 29 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 30 3.35869 0.13945 3.41123 2.77449 30 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 31 3.35869 0.13945 3.41123 2.77449 31 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 32 3.02400 2.55395 3.07460 0.18945 32 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 33 2.90201 3.52193 0.12462 3.41989 33 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 34 3.02400 2.55395 3.07460 0.18945 34 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 35 2.90201 3.52193 0.12462 3.41989 35 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 36 0.15071 3.31580 2.75984 3.21143 36 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 37 2.90201 3.52193 0.12462 3.41989 37 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 38 3.35869 0.13945 3.41123 2.77449 38 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 39 2.90201 3.52193 0.12462 3.41989 39 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 40 3.35869 0.13945 3.41123 2.77449 40 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 41 0.15071 3.31580 2.75984 3.21143 41 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 42 3.35869 0.13945 3.41123 2.77449 42 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 43 3.35869 0.13945 3.41123 2.77449 43 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 44 3.02400 2.55395 3.07460 0.18945 44 - - 1.38629 1.38629 1.38629 1.38629 0.03826 3.97552 3.97552 1.46634 0.26236 1.09861 0.40547 45 0.15071 3.31580 2.75984 3.21143 45 - - 1.38629 1.38629 1.38629 1.38629 0.01931 3.95658 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:52 2012 NSEQ 19 EFFN 3.251709 CKSUM 3691037779 STATS LOCAL MSV -8.0405 0.71934 STATS LOCAL VITERBI -7.8385 0.71934 STATS LOCAL FORWARD -3.7527 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34330 1.19986 1.61571 1.43116 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 0.00000 * 1 3.40659 0.13342 3.45717 2.80965 1 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 2 0.14497 3.35727 2.78696 3.25677 2 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 3 3.06546 2.58040 3.11450 0.18245 3 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 4 3.40659 0.13342 3.45717 2.80965 4 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 5 2.93142 3.56437 0.11975 3.46663 5 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 6 0.14497 3.35727 2.78696 3.25677 6 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 7 3.06546 2.58040 3.11450 0.18245 7 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 8 3.40659 0.13342 3.45717 2.80965 8 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 9 3.40659 0.13342 3.45717 2.80965 9 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 10 3.06546 2.58040 3.11450 0.18245 10 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 11 3.06546 2.58040 3.11450 0.18245 11 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 12 0.14497 3.35727 2.78696 3.25677 12 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 13 3.40659 0.13342 3.45717 2.80965 13 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 14 3.40659 0.13342 3.45717 2.80965 14 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 15 3.40659 0.13342 3.45717 2.80965 15 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 16 0.14497 3.35727 2.78696 3.25677 16 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 17 2.93142 3.56437 0.11975 3.46663 17 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 18 2.93142 3.56437 0.11975 3.46663 18 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 19 0.14497 3.35727 2.78696 3.25677 19 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 20 0.14497 3.35727 2.78696 3.25677 20 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 21 3.40659 0.13342 3.45717 2.80965 21 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 22 2.93142 3.56437 0.11975 3.46663 22 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 23 0.14497 3.35727 2.78696 3.25677 23 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 24 3.06546 2.58040 3.11450 0.18245 24 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 25 0.14497 3.35727 2.78696 3.25677 25 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 26 3.06546 2.58040 3.11450 0.18245 26 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 27 2.93142 3.56437 0.11975 3.46663 27 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 28 3.40659 0.13342 3.45717 2.80965 28 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 29 3.40659 0.13342 3.45717 2.80965 29 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 30 3.40659 0.13342 3.45717 2.80965 30 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 31 3.40659 0.13342 3.45717 2.80965 31 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 32 0.14497 3.35727 2.78696 3.25677 32 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 33 3.06546 2.58040 3.11450 0.18245 33 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 34 3.06546 2.58040 3.11450 0.18245 34 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 35 2.93142 3.56437 0.11975 3.46663 35 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 36 0.14497 3.35727 2.78696 3.25677 36 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 37 2.93142 3.56437 0.11975 3.46663 37 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 38 3.40659 0.13342 3.45717 2.80965 38 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 39 2.93142 3.56437 0.11975 3.46663 39 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 40 3.06546 2.58040 3.11450 0.18245 40 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 41 3.40659 0.13342 3.45717 2.80965 41 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 42 0.14497 3.35727 2.78696 3.25677 42 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 43 3.06546 2.58040 3.11450 0.18245 43 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 44 3.06546 2.58040 3.11450 0.18245 44 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99851 3.99851 1.46634 0.26236 1.09861 0.40547 45 0.14497 3.35727 2.78696 3.25677 45 - - 1.38629 1.38629 1.38629 1.38629 0.01886 3.98000 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:32 2012 NSEQ 5 EFFN 3.198242 CKSUM 1838760749 STATS LOCAL MSV -7.9990 0.71931 STATS LOCAL VITERBI -7.7765 0.71931 STATS LOCAL FORWARD -4.3208 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55563 1.15040 1.38658 1.50280 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 0.00000 * 1 2.91894 3.54631 0.12180 3.44673 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 2 0.14739 3.33958 2.77542 3.23743 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 3 3.38618 0.13595 3.43760 2.79470 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 4 0.14739 3.33958 2.77542 3.23743 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 5 3.38618 0.13595 3.43760 2.79470 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 6 3.38618 0.13595 3.43760 2.79470 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 7 2.91894 3.54631 0.12180 3.44673 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 8 2.91894 3.54631 0.12180 3.44673 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 9 3.38618 0.13595 3.43760 2.79470 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 10 3.04773 2.56910 3.09744 0.18541 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 11 3.38618 0.13595 3.43760 2.79470 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 12 3.04773 2.56910 3.09744 0.18541 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 13 0.14739 3.33958 2.77542 3.23743 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 14 3.04773 2.56910 3.09744 0.18541 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 15 3.38618 0.13595 3.43760 2.79470 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 16 3.38618 0.13595 3.43760 2.79470 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 17 2.91894 3.54631 0.12180 3.44673 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 18 0.14739 3.33958 2.77542 3.23743 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 19 2.91894 3.54631 0.12180 3.44673 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 20 3.38618 0.13595 3.43760 2.79470 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 21 0.14739 3.33958 2.77542 3.23743 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 22 2.91894 3.54631 0.12180 3.44673 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 23 2.91894 3.54631 0.12180 3.44673 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 24 3.04773 2.56910 3.09744 0.18541 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 25 0.14739 3.33958 2.77542 3.23743 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 26 3.04773 2.56910 3.09744 0.18541 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 27 2.91894 3.54631 0.12180 3.44673 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 28 3.38618 0.13595 3.43760 2.79470 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 29 3.38618 0.13595 3.43760 2.79470 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 30 3.38618 0.13595 3.43760 2.79470 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 31 3.38618 0.13595 3.43760 2.79470 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 32 3.04773 2.56910 3.09744 0.18541 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 33 3.04773 2.56910 3.09744 0.18541 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 34 3.04773 2.56910 3.09744 0.18541 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 35 2.91894 3.54631 0.12180 3.44673 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 36 0.14739 3.33958 2.77542 3.23743 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 37 2.91894 3.54631 0.12180 3.44673 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 38 3.38618 0.13595 3.43760 2.79470 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 39 2.91894 3.54631 0.12180 3.44673 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 40 3.38618 0.13595 3.43760 2.79470 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 41 3.38618 0.13595 3.43760 2.79470 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 42 0.14739 3.33958 2.77542 3.23743 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 43 3.04773 2.56910 3.09744 0.18541 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 44 3.04773 2.56910 3.09744 0.18541 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 45 0.14739 3.33958 2.77542 3.23743 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.96996 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_tena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:32 2012 NSEQ 4 EFFN 3.269531 CKSUM 1537044882 STATS LOCAL MSV -8.1683 0.71933 STATS LOCAL VITERBI -7.7449 0.71933 STATS LOCAL FORWARD -3.7123 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40984 1.19690 1.61770 1.36519 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 0.00000 * 1 3.41331 0.13259 3.46361 2.81457 1 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 2 0.14418 3.36310 2.79076 3.26314 2 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 3 3.07131 2.58413 3.12013 0.18149 3 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 4 3.41331 0.13259 3.46361 2.81457 4 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 5 2.93551 3.57031 0.11909 3.47317 5 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 6 0.14418 3.36310 2.79076 3.26314 6 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 7 2.93551 3.57031 0.11909 3.47317 7 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 8 3.41331 0.13259 3.46361 2.81457 8 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 9 3.07131 2.58413 3.12013 0.18149 9 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 10 3.07131 2.58413 3.12013 0.18149 10 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 11 3.07131 2.58413 3.12013 0.18149 11 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 12 3.07131 2.58413 3.12013 0.18149 12 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 13 3.41331 0.13259 3.46361 2.81457 13 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 14 3.41331 0.13259 3.46361 2.81457 14 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 15 3.41331 0.13259 3.46361 2.81457 15 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 16 0.14418 3.36310 2.79076 3.26314 16 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 17 0.14418 3.36310 2.79076 3.26314 17 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 18 2.93551 3.57031 0.11909 3.47317 18 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 19 3.41331 0.13259 3.46361 2.81457 19 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 20 0.14418 3.36310 2.79076 3.26314 20 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 21 3.41331 0.13259 3.46361 2.81457 21 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 22 2.93551 3.57031 0.11909 3.47317 22 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 23 0.14418 3.36310 2.79076 3.26314 23 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 24 3.07131 2.58413 3.12013 0.18149 24 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 25 0.14418 3.36310 2.79076 3.26314 25 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 26 3.07131 2.58413 3.12013 0.18149 26 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 27 2.93551 3.57031 0.11909 3.47317 27 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 28 3.41331 0.13259 3.46361 2.81457 28 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 29 3.41331 0.13259 3.46361 2.81457 29 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 30 3.41331 0.13259 3.46361 2.81457 30 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 31 3.41331 0.13259 3.46361 2.81457 31 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 32 0.14418 3.36310 2.79076 3.26314 32 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 33 3.07131 2.58413 3.12013 0.18149 33 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 34 3.07131 2.58413 3.12013 0.18149 34 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 35 2.93551 3.57031 0.11909 3.47317 35 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 36 0.14418 3.36310 2.79076 3.26314 36 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 37 2.93551 3.57031 0.11909 3.47317 37 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 38 3.41331 0.13259 3.46361 2.81457 38 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 39 2.93551 3.57031 0.11909 3.47317 39 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 40 3.07131 2.58413 3.12013 0.18149 40 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 41 3.41331 0.13259 3.46361 2.81457 41 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 42 0.14418 3.36310 2.79076 3.26314 42 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 43 3.07131 2.58413 3.12013 0.18149 43 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 44 3.07131 2.58413 3.12013 0.18149 44 - - 1.38629 1.38629 1.38629 1.38629 0.03725 4.00178 4.00178 1.46634 0.26236 1.09861 0.40547 45 0.14418 3.36310 2.79076 3.26314 45 - - 1.38629 1.38629 1.38629 1.38629 0.01880 3.98333 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_tenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:37 2012 NSEQ 8 EFFN 3.238281 CKSUM 924032037 STATS LOCAL MSV -8.2590 0.71932 STATS LOCAL VITERBI -7.7692 0.71932 STATS LOCAL FORWARD -3.8306 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.48146 1.14497 1.53637 1.43003 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 3.40150 0.13404 3.45229 2.80593 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 0.14557 3.35286 2.78409 3.25194 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 3.06103 2.57758 3.11024 0.18319 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.40150 0.13404 3.45229 2.80593 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 2.92831 3.55987 0.12026 3.46167 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 0.14557 3.35286 2.78409 3.25194 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 2.92831 3.55987 0.12026 3.46167 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.40150 0.13404 3.45229 2.80593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 3.06103 2.57758 3.11024 0.18319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 3.06103 2.57758 3.11024 0.18319 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 3.06103 2.57758 3.11024 0.18319 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 2.92831 3.55987 0.12026 3.46167 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 3.40150 0.13404 3.45229 2.80593 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.40150 0.13404 3.45229 2.80593 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 3.40150 0.13404 3.45229 2.80593 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 0.14557 3.35286 2.78409 3.25194 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 0.14557 3.35286 2.78409 3.25194 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 2.92831 3.55987 0.12026 3.46167 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 3.40150 0.13404 3.45229 2.80593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 0.14557 3.35286 2.78409 3.25194 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 3.40150 0.13404 3.45229 2.80593 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 2.92831 3.55987 0.12026 3.46167 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 0.14557 3.35286 2.78409 3.25194 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 3.06103 2.57758 3.11024 0.18319 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 0.14557 3.35286 2.78409 3.25194 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 3.06103 2.57758 3.11024 0.18319 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 2.92831 3.55987 0.12026 3.46167 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.40150 0.13404 3.45229 2.80593 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 3.40150 0.13404 3.45229 2.80593 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 3.40150 0.13404 3.45229 2.80593 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 0.14557 3.35286 2.78409 3.25194 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 3.06103 2.57758 3.11024 0.18319 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 3.06103 2.57758 3.11024 0.18319 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 2.92831 3.55987 0.12026 3.46167 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 0.14557 3.35286 2.78409 3.25194 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 2.92831 3.55987 0.12026 3.46167 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.40150 0.13404 3.45229 2.80593 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 2.92831 3.55987 0.12026 3.46167 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 3.06103 2.57758 3.11024 0.18319 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 3.40150 0.13404 3.45229 2.80593 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 3.40150 0.13404 3.45229 2.80593 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 3.06103 2.57758 3.11024 0.18319 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 3.06103 2.57758 3.11024 0.18319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 0.14557 3.35286 2.78409 3.25194 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:13:07 2012 NSEQ 15 EFFN 3.204346 CKSUM 845325246 STATS LOCAL MSV -8.0282 0.71931 STATS LOCAL VITERBI -7.6691 0.71931 STATS LOCAL FORWARD -4.1195 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47875 1.20479 1.38631 1.50361 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 0.00000 * 1 3.38853 0.13565 3.43985 2.79643 1 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 2 0.14711 3.34162 2.77675 3.23965 2 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 3 3.04977 2.57040 3.09940 0.18507 3 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 4 3.38853 0.13565 3.43985 2.79643 4 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 5 2.92038 3.54839 0.12156 3.44902 5 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 6 0.14711 3.34162 2.77675 3.23965 6 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 7 2.92038 3.54839 0.12156 3.44902 7 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 8 3.38853 0.13565 3.43985 2.79643 8 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 9 3.04977 2.57040 3.09940 0.18507 9 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 10 3.04977 2.57040 3.09940 0.18507 10 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 11 3.04977 2.57040 3.09940 0.18507 11 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 12 2.92038 3.54839 0.12156 3.44902 12 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 13 3.38853 0.13565 3.43985 2.79643 13 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 14 3.38853 0.13565 3.43985 2.79643 14 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 15 3.38853 0.13565 3.43985 2.79643 15 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 16 0.14711 3.34162 2.77675 3.23965 16 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 17 0.14711 3.34162 2.77675 3.23965 17 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 18 2.92038 3.54839 0.12156 3.44902 18 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 19 3.38853 0.13565 3.43985 2.79643 19 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 20 0.14711 3.34162 2.77675 3.23965 20 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 21 3.38853 0.13565 3.43985 2.79643 21 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 22 2.92038 3.54839 0.12156 3.44902 22 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 23 0.14711 3.34162 2.77675 3.23965 23 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 24 3.04977 2.57040 3.09940 0.18507 24 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 25 0.14711 3.34162 2.77675 3.23965 25 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 26 3.38853 0.13565 3.43985 2.79643 26 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 27 2.92038 3.54839 0.12156 3.44902 27 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 28 3.38853 0.13565 3.43985 2.79643 28 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 29 2.92038 3.54839 0.12156 3.44902 29 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 30 3.04977 2.57040 3.09940 0.18507 30 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 31 3.04977 2.57040 3.09940 0.18507 31 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 32 2.92038 3.54839 0.12156 3.44902 32 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 33 0.14711 3.34162 2.77675 3.23965 33 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 34 3.04977 2.57040 3.09940 0.18507 34 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 35 3.38853 0.13565 3.43985 2.79643 35 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 36 0.14711 3.34162 2.77675 3.23965 36 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 37 3.38853 0.13565 3.43985 2.79643 37 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 38 3.38853 0.13565 3.43985 2.79643 38 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 39 2.92038 3.54839 0.12156 3.44902 39 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 40 3.38853 0.13565 3.43985 2.79643 40 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 41 2.92038 3.54839 0.12156 3.44902 41 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 42 2.92038 3.54839 0.12156 3.44902 42 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 43 3.04977 2.57040 3.09940 0.18507 43 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 44 3.04977 2.57040 3.09940 0.18507 44 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 45 0.14711 3.34162 2.77675 3.23965 45 - - 1.38629 1.38629 1.38629 1.38629 0.01903 3.97111 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:07 2012 NSEQ 25 EFFN 3.347778 CKSUM 3526474026 STATS LOCAL MSV -8.0290 0.71932 STATS LOCAL VITERBI -7.6992 0.71932 STATS LOCAL FORWARD -3.9563 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.61379 1.45294 1.21414 1.30926 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 0.00000 * 1 2.95310 3.59587 0.11628 3.50138 1 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 2 3.44233 0.12911 3.49139 2.83570 2 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 3 0.14084 3.38826 2.80712 3.29069 3 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 4 3.44233 0.12911 3.49139 2.83570 4 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 5 3.44233 0.12911 3.49139 2.83570 5 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 6 3.44233 0.12911 3.49139 2.83570 6 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 7 3.09669 2.60028 3.14454 0.17738 7 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 8 3.44233 0.12911 3.49139 2.83570 8 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 9 3.09669 2.60028 3.14454 0.17738 9 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 10 2.95310 3.59587 0.11628 3.50138 10 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 11 2.95310 3.59587 0.11628 3.50138 11 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 12 3.09669 2.60028 3.14454 0.17738 12 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 13 0.14084 3.38826 2.80712 3.29069 13 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 14 3.09669 2.60028 3.14454 0.17738 14 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 15 3.09669 2.60028 3.14454 0.17738 15 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 16 3.44233 0.12911 3.49139 2.83570 16 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 17 3.44233 0.12911 3.49139 2.83570 17 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 18 2.95310 3.59587 0.11628 3.50138 18 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 19 2.95310 3.59587 0.11628 3.50138 19 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 20 0.14084 3.38826 2.80712 3.29069 20 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 21 2.95310 3.59587 0.11628 3.50138 21 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 22 2.95310 3.59587 0.11628 3.50138 22 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 23 2.95310 3.59587 0.11628 3.50138 23 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 24 3.09669 2.60028 3.14454 0.17738 24 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 25 0.14084 3.38826 2.80712 3.29069 25 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 26 3.09669 2.60028 3.14454 0.17738 26 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 27 2.95310 3.59587 0.11628 3.50138 27 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 28 3.44233 0.12911 3.49139 2.83570 28 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 29 3.44233 0.12911 3.49139 2.83570 29 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 30 3.44233 0.12911 3.49139 2.83570 30 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 31 2.95310 3.59587 0.11628 3.50138 31 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 32 2.95310 3.59587 0.11628 3.50138 32 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 33 3.09669 2.60028 3.14454 0.17738 33 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 34 3.09669 2.60028 3.14454 0.17738 34 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 35 2.95310 3.59587 0.11628 3.50138 35 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 36 0.14084 3.38826 2.80712 3.29069 36 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 37 2.95310 3.59587 0.11628 3.50138 37 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 38 3.09669 2.60028 3.14454 0.17738 38 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 39 0.14084 3.38826 2.80712 3.29069 39 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 40 3.09669 2.60028 3.14454 0.17738 40 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 41 3.09669 2.60028 3.14454 0.17738 41 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 42 0.14084 3.38826 2.80712 3.29069 42 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 43 3.09669 2.60028 3.14454 0.17738 43 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 44 1.40241 2.68354 0.49922 2.54249 44 - - 1.38629 1.38629 1.38629 1.38629 0.03672 4.01598 4.01598 1.46634 0.26236 1.09861 0.40547 45 0.14084 3.38826 2.80712 3.29069 45 - - 1.38629 1.38629 1.38629 1.38629 0.01853 3.99779 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:17:18 2012 NSEQ 32 EFFN 3.394531 CKSUM 2669063487 STATS LOCAL MSV -7.3665 0.71932 STATS LOCAL VITERBI -7.8105 0.71932 STATS LOCAL FORWARD -4.2491 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54470 1.47761 1.25273 1.29932 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 0.00000 * 1 2.96332 3.61077 0.11467 3.51784 1 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 2 3.45928 0.12713 3.50762 2.84801 2 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 3 0.13893 3.40299 2.81667 3.30682 3 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 4 3.45928 0.12713 3.50762 2.84801 4 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 5 3.45928 0.12713 3.50762 2.84801 5 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 6 3.11161 2.60976 3.15889 0.17501 6 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 7 3.11161 2.60976 3.15889 0.17501 7 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 8 3.45928 0.12713 3.50762 2.84801 8 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 9 3.45928 0.12713 3.50762 2.84801 9 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 10 0.13893 3.40299 2.81667 3.30682 10 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 11 2.96332 3.61077 0.11467 3.51784 11 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 12 3.11161 2.60976 3.15889 0.17501 12 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 13 0.13893 3.40299 2.81667 3.30682 13 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 14 2.60089 0.48729 2.67136 1.41739 14 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 15 3.11161 2.60976 3.15889 0.17501 15 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 16 3.45928 0.12713 3.50762 2.84801 16 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 17 3.11161 2.60976 3.15889 0.17501 17 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 18 2.96332 3.61077 0.11467 3.51784 18 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 19 2.96332 3.61077 0.11467 3.51784 19 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 20 0.13893 3.40299 2.81667 3.30682 20 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 21 2.50443 3.37772 0.16702 3.27104 21 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 22 2.96332 3.61077 0.11467 3.51784 22 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 23 2.96332 3.61077 0.11467 3.51784 23 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 24 3.11161 2.60976 3.15889 0.17501 24 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 25 0.13893 3.40299 2.81667 3.30682 25 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 26 3.00916 2.36348 3.06014 0.21110 26 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 27 2.96332 3.61077 0.11467 3.51784 27 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 28 3.45928 0.12713 3.50762 2.84801 28 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 29 3.45928 0.12713 3.50762 2.84801 29 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 30 3.45928 0.12713 3.50762 2.84801 30 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 31 2.96332 3.61077 0.11467 3.51784 31 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 32 2.96332 3.61077 0.11467 3.51784 32 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 33 3.11161 2.60976 3.15889 0.17501 33 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 34 3.11161 2.60976 3.15889 0.17501 34 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 35 2.96332 3.61077 0.11467 3.51784 35 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 36 0.13893 3.40299 2.81667 3.30682 36 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 37 2.96332 3.61077 0.11467 3.51784 37 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 38 3.11161 2.60976 3.15889 0.17501 38 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 39 0.13893 3.40299 2.81667 3.30682 39 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 40 3.11161 2.60976 3.15889 0.17501 40 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 41 3.11161 2.60976 3.15889 0.17501 41 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 42 0.13893 3.40299 2.81667 3.30682 42 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 43 3.11161 2.60976 3.15889 0.17501 43 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 44 2.96332 3.61077 0.11467 3.51784 44 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 45 0.13893 3.40299 2.81667 3.30682 45 - - 1.38629 1.38629 1.38629 1.38629 0.01837 4.00634 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:49 2012 NSEQ 2 EFFN 2.000000 CKSUM 1660645666 STATS LOCAL MSV -7.4478 0.72784 STATS LOCAL VITERBI -8.1116 0.72784 STATS LOCAL FORWARD -3.4035 0.72784 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73811 1.39517 1.16676 1.32810 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:41 2012 NSEQ 4 EFFN 3.222656 CKSUM 1259449570 STATS LOCAL MSV -7.9923 0.71933 STATS LOCAL VITERBI -7.7382 0.71933 STATS LOCAL FORWARD -3.9022 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.71972 1.45669 1.14122 1.31509 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * 1 2.92468 3.55461 0.12085 3.45586 1 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 2 3.39555 0.13478 3.44658 2.80157 2 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 3 0.14627 3.34770 2.78072 3.24630 3 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 4 3.39555 0.13478 3.44658 2.80157 4 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 5 3.39555 0.13478 3.44658 2.80157 5 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 6 3.39555 0.13478 3.44658 2.80157 6 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 7 3.05586 2.57429 3.10526 0.18405 7 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 8 3.39555 0.13478 3.44658 2.80157 8 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 9 3.05586 2.57429 3.10526 0.18405 9 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 10 2.92468 3.55461 0.12085 3.45586 10 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 11 2.92468 3.55461 0.12085 3.45586 11 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 12 3.05586 2.57429 3.10526 0.18405 12 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 13 0.14627 3.34770 2.78072 3.24630 13 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 14 3.05586 2.57429 3.10526 0.18405 14 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 15 3.05586 2.57429 3.10526 0.18405 15 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 16 3.39555 0.13478 3.44658 2.80157 16 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 17 3.39555 0.13478 3.44658 2.80157 17 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 18 2.92468 3.55461 0.12085 3.45586 18 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 19 2.92468 3.55461 0.12085 3.45586 19 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 20 0.14627 3.34770 2.78072 3.24630 20 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 21 2.92468 3.55461 0.12085 3.45586 21 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 22 2.92468 3.55461 0.12085 3.45586 22 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 23 2.92468 3.55461 0.12085 3.45586 23 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 24 3.05586 2.57429 3.10526 0.18405 24 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 25 0.14627 3.34770 2.78072 3.24630 25 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 26 3.05586 2.57429 3.10526 0.18405 26 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 27 2.92468 3.55461 0.12085 3.45586 27 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 28 3.39555 0.13478 3.44658 2.80157 28 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 29 3.39555 0.13478 3.44658 2.80157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 30 3.39555 0.13478 3.44658 2.80157 30 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 31 2.92468 3.55461 0.12085 3.45586 31 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 32 2.92468 3.55461 0.12085 3.45586 32 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 33 3.05586 2.57429 3.10526 0.18405 33 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 34 3.05586 2.57429 3.10526 0.18405 34 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 35 2.92468 3.55461 0.12085 3.45586 35 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 36 0.14627 3.34770 2.78072 3.24630 36 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 37 2.92468 3.55461 0.12085 3.45586 37 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 38 0.14627 3.34770 2.78072 3.24630 38 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 39 2.92468 3.55461 0.12085 3.45586 39 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 40 3.05586 2.57429 3.10526 0.18405 40 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 41 3.05586 2.57429 3.10526 0.18405 41 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 42 3.05586 2.57429 3.10526 0.18405 42 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 43 3.05586 2.57429 3.10526 0.18405 43 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 44 2.92468 3.55461 0.12085 3.45586 44 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 45 0.14627 3.34770 2.78072 3.24630 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97456 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:17:27 2012 NSEQ 19 EFFN 3.279541 CKSUM 3111235166 STATS LOCAL MSV -8.0224 0.71934 STATS LOCAL VITERBI -7.8055 0.71934 STATS LOCAL FORWARD -4.1423 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62916 1.38347 1.26067 1.31032 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 0.00000 * 1 2.93780 3.57362 0.11872 3.47683 1 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 2 3.41707 0.13214 3.46721 2.81731 2 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 3 0.14375 3.36635 2.79288 3.26670 3 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 4 3.41707 0.13214 3.46721 2.81731 4 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 5 3.41707 0.13214 3.46721 2.81731 5 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 6 3.07459 2.58622 3.12328 0.18095 6 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 7 3.07459 2.58622 3.12328 0.18095 7 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 8 3.41707 0.13214 3.46721 2.81731 8 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 9 3.41707 0.13214 3.46721 2.81731 9 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 10 0.14375 3.36635 2.79288 3.26670 10 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 11 2.93780 3.57362 0.11872 3.47683 11 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 12 3.07459 2.58622 3.12328 0.18095 12 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 13 3.41707 0.13214 3.46721 2.81731 13 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 14 3.41707 0.13214 3.46721 2.81731 14 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 15 3.07459 2.58622 3.12328 0.18095 15 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 16 3.41707 0.13214 3.46721 2.81731 16 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 17 3.07459 2.58622 3.12328 0.18095 17 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 18 2.93780 3.57362 0.11872 3.47683 18 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 19 2.93780 3.57362 0.11872 3.47683 19 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 20 0.14375 3.36635 2.79288 3.26670 20 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 21 2.26575 3.20451 0.21069 3.08687 21 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 22 2.93780 3.57362 0.11872 3.47683 22 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 23 2.93780 3.57362 0.11872 3.47683 23 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 24 3.07459 2.58622 3.12328 0.18095 24 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 25 0.14375 3.36635 2.79288 3.26670 25 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 26 3.07459 2.58622 3.12328 0.18095 26 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 27 2.93780 3.57362 0.11872 3.47683 27 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 28 3.41707 0.13214 3.46721 2.81731 28 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 29 3.41707 0.13214 3.46721 2.81731 29 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 30 3.41707 0.13214 3.46721 2.81731 30 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 31 2.93780 3.57362 0.11872 3.47683 31 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 32 2.93780 3.57362 0.11872 3.47683 32 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 33 3.07459 2.58622 3.12328 0.18095 33 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 34 3.07459 2.58622 3.12328 0.18095 34 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 35 2.93780 3.57362 0.11872 3.47683 35 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 36 0.14375 3.36635 2.79288 3.26670 36 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 37 2.93780 3.57362 0.11872 3.47683 37 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 38 3.07459 2.58622 3.12328 0.18095 38 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 39 0.14375 3.36635 2.79288 3.26670 39 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 40 3.07459 2.58622 3.12328 0.18095 40 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 41 3.07459 2.58622 3.12328 0.18095 41 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 42 0.14375 3.36635 2.79288 3.26670 42 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 43 3.07459 2.58622 3.12328 0.18095 43 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 44 2.93780 3.57362 0.11872 3.47683 44 - - 1.38629 1.38629 1.38629 1.38629 0.03718 4.00361 4.00361 1.46634 0.26236 1.09861 0.40547 45 0.14375 3.36635 2.79288 3.26670 45 - - 1.38629 1.38629 1.38629 1.38629 0.01876 3.98519 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:14 2012 NSEQ 18 EFFN 3.414551 CKSUM 3741154468 STATS LOCAL MSV -7.2657 0.71931 STATS LOCAL VITERBI -7.6184 0.71931 STATS LOCAL FORWARD -4.2095 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51580 1.52525 1.28730 1.24902 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 0.00000 * 1 2.96763 3.61706 0.11400 3.52480 1 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 2 3.46646 0.12630 3.51449 2.85321 2 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 3 0.13813 3.40923 2.82071 3.31365 3 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 4 3.46646 0.12630 3.51449 2.85321 4 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 5 3.46646 0.12630 3.51449 2.85321 5 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 6 3.46646 0.12630 3.51449 2.85321 6 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 7 3.11794 2.61378 3.16497 0.17402 7 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 8 3.11794 2.61378 3.16497 0.17402 8 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 9 3.11794 2.61378 3.16497 0.17402 9 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 10 2.96763 3.61706 0.11400 3.52480 10 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 11 2.96763 3.61706 0.11400 3.52480 11 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 12 3.11794 2.61378 3.16497 0.17402 12 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 13 0.13813 3.40923 2.82071 3.31365 13 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 14 3.11794 2.61378 3.16497 0.17402 14 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 15 3.11794 2.61378 3.16497 0.17402 15 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 16 3.46646 0.12630 3.51449 2.85321 16 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 17 3.46646 0.12630 3.51449 2.85321 17 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 18 2.96763 3.61706 0.11400 3.52480 18 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 19 0.13813 3.40923 2.82071 3.31365 19 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 20 0.13813 3.40923 2.82071 3.31365 20 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 21 2.96763 3.61706 0.11400 3.52480 21 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 22 2.96763 3.61706 0.11400 3.52480 22 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 23 2.96763 3.61706 0.11400 3.52480 23 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 24 3.11794 2.61378 3.16497 0.17402 24 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 25 0.13813 3.40923 2.82071 3.31365 25 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 26 3.11794 2.61378 3.16497 0.17402 26 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 27 2.96763 3.61706 0.11400 3.52480 27 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 28 3.46646 0.12630 3.51449 2.85321 28 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 29 3.46646 0.12630 3.51449 2.85321 29 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 30 3.46646 0.12630 3.51449 2.85321 30 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 31 2.96763 3.61706 0.11400 3.52480 31 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 32 2.96763 3.61706 0.11400 3.52480 32 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 33 3.11794 2.61378 3.16497 0.17402 33 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 34 3.11794 2.61378 3.16497 0.17402 34 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 35 2.96763 3.61706 0.11400 3.52480 35 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 36 0.13813 3.40923 2.82071 3.31365 36 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 37 2.96763 3.61706 0.11400 3.52480 37 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 38 3.11794 2.61378 3.16497 0.17402 38 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 39 0.13813 3.40923 2.82071 3.31365 39 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 40 3.11794 2.61378 3.16497 0.17402 40 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 41 3.11794 2.61378 3.16497 0.17402 41 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 42 0.13813 3.40923 2.82071 3.31365 42 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 43 3.11794 2.61378 3.16497 0.17402 43 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 44 0.85781 2.53043 0.90573 2.38555 44 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 45 0.13813 3.40923 2.82071 3.31365 45 - - 1.38629 1.38629 1.38629 1.38629 0.01830 4.00998 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:17:06 2012 NSEQ 2 EFFN 2.000000 CKSUM 1321984136 STATS LOCAL MSV -7.4429 0.72764 STATS LOCAL VITERBI -8.5008 0.72764 STATS LOCAL FORWARD -3.4219 0.72764 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73928 1.39858 1.11995 1.38188 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:59 2012 NSEQ 2 EFFN 2.000000 CKSUM 364489921 STATS LOCAL MSV -7.3526 0.72796 STATS LOCAL VITERBI -8.1188 0.72796 STATS LOCAL FORWARD -3.4089 0.72796 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73627 1.45221 1.16577 1.27982 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:31 2012 NSEQ 69 EFFN 3.213318 CKSUM 2306375096 STATS LOCAL MSV -8.0120 0.71932 STATS LOCAL VITERBI -7.5875 0.71932 STATS LOCAL FORWARD -3.9698 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63354 1.38837 1.19565 1.37525 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 0.00000 * 1 2.92249 3.55144 0.12121 3.45238 1 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 2 3.39197 0.13522 3.44315 2.79895 2 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 3 2.92249 3.55144 0.12121 3.45238 3 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 4 3.39197 0.13522 3.44315 2.79895 4 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 5 3.39197 0.13522 3.44315 2.79895 5 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 6 3.39197 0.13522 3.44315 2.79895 6 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 7 3.05276 2.57231 3.10227 0.18457 7 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 8 3.39197 0.13522 3.44315 2.79895 8 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 9 3.05276 2.57231 3.10227 0.18457 9 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 10 2.92249 3.55144 0.12121 3.45238 10 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 11 2.92249 3.55144 0.12121 3.45238 11 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 12 3.05276 2.57231 3.10227 0.18457 12 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 13 0.14670 3.34460 2.77870 3.24291 13 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 14 3.05276 2.57231 3.10227 0.18457 14 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 15 3.05276 2.57231 3.10227 0.18457 15 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 16 3.39197 0.13522 3.44315 2.79895 16 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 17 3.39197 0.13522 3.44315 2.79895 17 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 18 2.92249 3.55144 0.12121 3.45238 18 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 19 2.92249 3.55144 0.12121 3.45238 19 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 20 0.14670 3.34460 2.77870 3.24291 20 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 21 2.92249 3.55144 0.12121 3.45238 21 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 22 0.14670 3.34460 2.77870 3.24291 22 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 23 2.92249 3.55144 0.12121 3.45238 23 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 24 3.39197 0.13522 3.44315 2.79895 24 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 25 0.14670 3.34460 2.77870 3.24291 25 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 26 3.05276 2.57231 3.10227 0.18457 26 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 27 2.92249 3.55144 0.12121 3.45238 27 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 28 3.39197 0.13522 3.44315 2.79895 28 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 29 3.39197 0.13522 3.44315 2.79895 29 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 30 3.39197 0.13522 3.44315 2.79895 30 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 31 2.92249 3.55144 0.12121 3.45238 31 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 32 2.92249 3.55144 0.12121 3.45238 32 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 33 3.05276 2.57231 3.10227 0.18457 33 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 34 3.05276 2.57231 3.10227 0.18457 34 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 35 2.92249 3.55144 0.12121 3.45238 35 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 36 0.14670 3.34460 2.77870 3.24291 36 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 37 2.92249 3.55144 0.12121 3.45238 37 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 38 3.05276 2.57231 3.10227 0.18457 38 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 39 0.14670 3.34460 2.77870 3.24291 39 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 40 3.05276 2.57231 3.10227 0.18457 40 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 41 3.05276 2.57231 3.10227 0.18457 41 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 42 0.14670 3.34460 2.77870 3.24291 42 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 43 3.05276 2.57231 3.10227 0.18457 43 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 44 2.92249 3.55144 0.12121 3.45238 44 - - 1.38629 1.38629 1.38629 1.38629 0.03765 3.99145 3.99145 1.46634 0.26236 1.09861 0.40547 45 0.14670 3.34460 2.77870 3.24291 45 - - 1.38629 1.38629 1.38629 1.38629 0.01900 3.97280 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:16:23 2012 NSEQ 26 EFFN 3.348389 CKSUM 1469927080 STATS LOCAL MSV -7.9913 0.71933 STATS LOCAL VITERBI -7.6268 0.71933 STATS LOCAL FORWARD -4.0718 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47178 1.60222 1.31120 1.20551 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 0.00000 * 1 2.95324 3.59606 0.11625 3.50160 1 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 2 3.44255 0.12909 3.49161 2.83587 2 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 3 0.14082 3.38846 2.80725 3.29090 3 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 4 3.44255 0.12909 3.49161 2.83587 4 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 5 3.44255 0.12909 3.49161 2.83587 5 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 6 3.09689 2.60041 3.14473 0.17735 6 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 7 3.09689 2.60041 3.14473 0.17735 7 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 8 3.09689 2.60041 3.14473 0.17735 8 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 9 3.09689 2.60041 3.14473 0.17735 9 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 10 2.95324 3.59606 0.11625 3.50160 10 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 11 2.95324 3.59606 0.11625 3.50160 11 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 12 3.09689 2.60041 3.14473 0.17735 12 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 13 0.14082 3.38846 2.80725 3.29090 13 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 14 3.09689 2.60041 3.14473 0.17735 14 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 15 3.09689 2.60041 3.14473 0.17735 15 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 16 3.44255 0.12909 3.49161 2.83587 16 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 17 3.44255 0.12909 3.49161 2.83587 17 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 18 2.95324 3.59606 0.11625 3.50160 18 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 19 0.14082 3.38846 2.80725 3.29090 19 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 20 0.14082 3.38846 2.80725 3.29090 20 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 21 0.14082 3.38846 2.80725 3.29090 21 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 22 2.95324 3.59606 0.11625 3.50160 22 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 23 2.95324 3.59606 0.11625 3.50160 23 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 24 3.09689 2.60041 3.14473 0.17735 24 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 25 0.14082 3.38846 2.80725 3.29090 25 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 26 2.81926 1.98984 2.87734 0.29122 26 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 27 2.95324 3.59606 0.11625 3.50160 27 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 28 3.44255 0.12909 3.49161 2.83587 28 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 29 3.44255 0.12909 3.49161 2.83587 29 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 30 3.44255 0.12909 3.49161 2.83587 30 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 31 2.95324 3.59606 0.11625 3.50160 31 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 32 2.95324 3.59606 0.11625 3.50160 32 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 33 3.09689 2.60041 3.14473 0.17735 33 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 34 3.09689 2.60041 3.14473 0.17735 34 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 35 2.95324 3.59606 0.11625 3.50160 35 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 36 0.14082 3.38846 2.80725 3.29090 36 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 37 2.95324 3.59606 0.11625 3.50160 37 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 38 3.09689 2.60041 3.14473 0.17735 38 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 39 0.14082 3.38846 2.80725 3.29090 39 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 40 3.09689 2.60041 3.14473 0.17735 40 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 41 3.09689 2.60041 3.14473 0.17735 41 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 42 0.14082 3.38846 2.80725 3.29090 42 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 43 3.09689 2.60041 3.14473 0.17735 43 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 44 2.95324 3.59606 0.11625 3.50160 44 - - 1.38629 1.38629 1.38629 1.38629 0.03671 4.01609 4.01609 1.46634 0.26236 1.09861 0.40547 45 0.14082 3.38846 2.80725 3.29090 45 - - 1.38629 1.38629 1.38629 1.38629 0.01852 3.99790 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:27 2012 NSEQ 636 EFFN 3.265594 CKSUM 2208061849 STATS LOCAL MSV -8.2045 0.71934 STATS LOCAL VITERBI -7.6650 0.71934 STATS LOCAL FORWARD -4.0510 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82584 1.09130 1.32417 1.43922 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 0.00000 * 1 0.14436 3.36181 2.78992 3.26173 1 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 2 3.41183 0.13277 3.46219 2.81348 2 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 3 3.41183 0.13277 3.46219 2.81348 3 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 4 2.93461 3.56900 0.11923 3.47173 4 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 5 3.35814 0.14439 3.40995 2.70893 5 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 6 2.93461 3.56900 0.11923 3.47173 6 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 7 3.41183 0.13277 3.46219 2.81348 7 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 8 3.41183 0.13277 3.46219 2.81348 8 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 9 3.30907 0.14855 3.26307 2.76113 9 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 10 3.07002 2.58331 3.11889 0.18170 10 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 11 0.14436 3.36181 2.78992 3.26173 11 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 12 0.14436 3.36181 2.78992 3.26173 12 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 13 2.62631 1.89691 2.74803 0.33748 13 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 14 3.41183 0.13277 3.46219 2.81348 14 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 15 3.35255 0.14564 3.40452 2.69844 15 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 16 2.93461 3.56900 0.11923 3.47173 16 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 17 2.93461 3.56900 0.11923 3.47173 17 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 18 3.41183 0.13277 3.46219 2.81348 18 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 19 3.07002 2.58331 3.11889 0.18170 19 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 20 2.93461 3.56900 0.11923 3.47173 20 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 21 3.33581 0.14941 3.38826 2.66738 21 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 22 2.93461 3.56900 0.11923 3.47173 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 23 2.93461 3.56900 0.11923 3.47173 23 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 24 3.07002 2.58331 3.11889 0.18170 24 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 25 0.14436 3.36181 2.78992 3.26173 25 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 26 3.07002 2.58331 3.11889 0.18170 26 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 27 2.93461 3.56900 0.11923 3.47173 27 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 28 3.41183 0.13277 3.46219 2.81348 28 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 29 3.41183 0.13277 3.46219 2.81348 29 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 30 3.41183 0.13277 3.46219 2.81348 30 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 31 3.41183 0.13277 3.46219 2.81348 31 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 32 3.07002 2.58331 3.11889 0.18170 32 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 33 3.07002 2.58331 3.11889 0.18170 33 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 34 3.07002 2.58331 3.11889 0.18170 34 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 35 2.93461 3.56900 0.11923 3.47173 35 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 36 0.14436 3.36181 2.78992 3.26173 36 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 37 2.93461 3.56900 0.11923 3.47173 37 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 38 3.41183 0.13277 3.46219 2.81348 38 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 39 2.93461 3.56900 0.11923 3.47173 39 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 40 3.07002 2.58331 3.11889 0.18170 40 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 41 3.41183 0.13277 3.46219 2.81348 41 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 42 0.14436 3.36181 2.78992 3.26173 42 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 43 3.07002 2.58331 3.11889 0.18170 43 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 44 3.07002 2.58331 3.11889 0.18170 44 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00106 4.00106 1.46634 0.26236 1.09861 0.40547 45 2.93461 3.56900 0.11923 3.47173 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98259 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:12:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 636756772 STATS LOCAL MSV -7.4971 0.72788 STATS LOCAL VITERBI -8.4794 0.72788 STATS LOCAL FORWARD -3.2172 0.72788 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34726 1.19087 1.50491 1.54153 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:20 2012 NSEQ 53 EFFN 3.251038 CKSUM 1432045110 STATS LOCAL MSV -8.1636 0.71933 STATS LOCAL VITERBI -7.6438 0.71933 STATS LOCAL FORWARD -4.2586 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63423 1.38479 1.25605 1.31027 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 0.00000 * 1 3.06524 2.58026 3.11428 0.18249 1 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 2 3.06524 2.58026 3.11428 0.18249 2 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 3 2.93127 3.56415 0.11978 3.46638 3 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 4 3.40634 0.13345 3.45692 2.80947 4 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 5 0.14500 3.35705 2.78682 3.25652 5 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 6 3.40634 0.13345 3.45692 2.80947 6 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 7 3.40634 0.13345 3.45692 2.80947 7 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 8 2.93127 3.56415 0.11978 3.46638 8 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 9 3.40634 0.13345 3.45692 2.80947 9 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 10 3.40634 0.13345 3.45692 2.80947 10 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 11 3.40634 0.13345 3.45692 2.80947 11 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 12 3.06524 2.58026 3.11428 0.18249 12 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 13 3.06524 2.58026 3.11428 0.18249 13 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 14 3.06524 2.58026 3.11428 0.18249 14 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 15 3.06524 2.58026 3.11428 0.18249 15 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 16 2.93127 3.56415 0.11978 3.46638 16 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 17 2.93127 3.56415 0.11978 3.46638 17 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 18 2.93127 3.56415 0.11978 3.46638 18 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 19 0.14500 3.35705 2.78682 3.25652 19 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 20 2.93127 3.56415 0.11978 3.46638 20 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 21 3.06524 2.58026 3.11428 0.18249 21 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 22 2.93127 3.56415 0.11978 3.46638 22 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 23 2.93127 3.56415 0.11978 3.46638 23 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 24 3.06524 2.58026 3.11428 0.18249 24 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 25 0.14500 3.35705 2.78682 3.25652 25 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 26 3.40634 0.13345 3.45692 2.80947 26 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 27 2.93127 3.56415 0.11978 3.46638 27 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 28 3.40634 0.13345 3.45692 2.80947 28 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 29 3.40634 0.13345 3.45692 2.80947 29 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 30 3.40634 0.13345 3.45692 2.80947 30 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 31 2.93127 3.56415 0.11978 3.46638 31 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 32 0.14500 3.35705 2.78682 3.25652 32 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 33 3.06524 2.58026 3.11428 0.18249 33 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 34 3.06524 2.58026 3.11428 0.18249 34 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 35 2.93127 3.56415 0.11978 3.46638 35 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 36 0.14500 3.35705 2.78682 3.25652 36 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 37 2.93127 3.56415 0.11978 3.46638 37 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 38 3.06524 2.58026 3.11428 0.18249 38 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 39 2.93127 3.56415 0.11978 3.46638 39 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 40 2.99219 2.40457 3.04365 0.20843 40 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 41 3.40634 0.13345 3.45692 2.80947 41 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 42 0.14500 3.35705 2.78682 3.25652 42 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 43 3.06524 2.58026 3.11428 0.18249 43 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 44 0.14500 3.35705 2.78682 3.25652 44 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99839 3.99839 1.46634 0.26236 1.09861 0.40547 45 0.14500 3.35705 2.78682 3.25652 45 - - 1.38629 1.38629 1.38629 1.38629 0.01886 3.97988 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:15:40 2012 NSEQ 21 EFFN 3.237671 CKSUM 2025506789 STATS LOCAL MSV -7.9023 0.71932 STATS LOCAL VITERBI -7.6088 0.71932 STATS LOCAL FORWARD -4.2034 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63136 1.45616 1.19549 1.31434 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 0.00000 * 1 2.92817 3.55967 0.12028 3.46144 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 2 3.40127 0.13407 3.45207 2.80576 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 3 0.14560 3.35266 2.78396 3.25172 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 4 3.40127 0.13407 3.45207 2.80576 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 5 3.40127 0.13407 3.45207 2.80576 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 6 3.40127 0.13407 3.45207 2.80576 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 7 3.06083 2.57745 3.11004 0.18322 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 8 3.40127 0.13407 3.45207 2.80576 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 9 3.06083 2.57745 3.11004 0.18322 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 10 0.14560 3.35266 2.78396 3.25172 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 11 2.92817 3.55967 0.12028 3.46144 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 12 3.06083 2.57745 3.11004 0.18322 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 13 0.14560 3.35266 2.78396 3.25172 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 14 3.06083 2.57745 3.11004 0.18322 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 15 3.06083 2.57745 3.11004 0.18322 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 16 3.40127 0.13407 3.45207 2.80576 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 17 3.06083 2.57745 3.11004 0.18322 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 18 2.92817 3.55967 0.12028 3.46144 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 19 2.92817 3.55967 0.12028 3.46144 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 20 0.14560 3.35266 2.78396 3.25172 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 21 2.92817 3.55967 0.12028 3.46144 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 22 2.92817 3.55967 0.12028 3.46144 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 23 2.92817 3.55967 0.12028 3.46144 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 24 3.06083 2.57745 3.11004 0.18322 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 25 0.14560 3.35266 2.78396 3.25172 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 26 3.06083 2.57745 3.11004 0.18322 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 27 2.92817 3.55967 0.12028 3.46144 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 28 3.40127 0.13407 3.45207 2.80576 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 29 3.40127 0.13407 3.45207 2.80576 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 30 3.40127 0.13407 3.45207 2.80576 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 31 2.92817 3.55967 0.12028 3.46144 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 32 2.92817 3.55967 0.12028 3.46144 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 33 3.06083 2.57745 3.11004 0.18322 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 34 3.06083 2.57745 3.11004 0.18322 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 35 2.92817 3.55967 0.12028 3.46144 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 36 0.14560 3.35266 2.78396 3.25172 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 37 2.92817 3.55967 0.12028 3.46144 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 38 3.06083 2.57745 3.11004 0.18322 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 39 2.92817 3.55967 0.12028 3.46144 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 40 3.06083 2.57745 3.11004 0.18322 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 41 3.40127 0.13407 3.45207 2.80576 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 42 0.14560 3.35266 2.78396 3.25172 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 43 3.06083 2.57745 3.11004 0.18322 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 44 2.92817 3.55967 0.12028 3.46144 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99594 3.99594 1.46634 0.26236 1.09861 0.40547 45 0.14560 3.35266 2.78396 3.25172 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97737 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:15:06 2012 NSEQ 4 EFFN 3.214844 CKSUM 2866287227 STATS LOCAL MSV -7.9504 0.71933 STATS LOCAL VITERBI -7.7053 0.71933 STATS LOCAL FORWARD -3.9958 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55658 1.20087 1.38656 1.43432 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 3.39256 0.13515 3.44371 2.79938 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 3.39256 0.13515 3.44371 2.79938 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 2.92285 3.55196 0.12115 3.45295 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 2.92285 3.55196 0.12115 3.45295 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 0.14663 3.34511 2.77903 3.24347 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 3.39256 0.13515 3.44371 2.79938 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 2.92285 3.55196 0.12115 3.45295 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 0.14663 3.34511 2.77903 3.24347 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.39256 0.13515 3.44371 2.79938 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 0.14663 3.34511 2.77903 3.24347 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 3.39256 0.13515 3.44371 2.79938 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 3.39256 0.13515 3.44371 2.79938 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 3.39256 0.13515 3.44371 2.79938 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.39256 0.13515 3.44371 2.79938 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.39256 0.13515 3.44371 2.79938 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 2.92285 3.55196 0.12115 3.45295 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 3.05326 2.57263 3.10276 0.18448 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 2.92285 3.55196 0.12115 3.45295 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 2.92285 3.55196 0.12115 3.45295 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 0.14663 3.34511 2.77903 3.24347 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 3.05326 2.57263 3.10276 0.18448 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 0.14663 3.34511 2.77903 3.24347 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 2.92285 3.55196 0.12115 3.45295 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 3.05326 2.57263 3.10276 0.18448 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 0.14663 3.34511 2.77903 3.24347 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.05326 2.57263 3.10276 0.18448 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 2.92285 3.55196 0.12115 3.45295 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.39256 0.13515 3.44371 2.79938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 3.39256 0.13515 3.44371 2.79938 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 0.14663 3.34511 2.77903 3.24347 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.05326 2.57263 3.10276 0.18448 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 3.05326 2.57263 3.10276 0.18448 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 2.92285 3.55196 0.12115 3.45295 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 0.14663 3.34511 2.77903 3.24347 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 2.92285 3.55196 0.12115 3.45295 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.39256 0.13515 3.44371 2.79938 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 2.92285 3.55196 0.12115 3.45295 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 3.05326 2.57263 3.10276 0.18448 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 3.05326 2.57263 3.10276 0.18448 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 0.14663 3.34511 2.77903 3.24347 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 3.05326 2.57263 3.10276 0.18448 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 3.05326 2.57263 3.10276 0.18448 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 3.05326 2.57263 3.10276 0.18448 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:58 2012 NSEQ 80 EFFN 3.725586 CKSUM 164171626 STATS LOCAL MSV -6.7851 0.71931 STATS LOCAL VITERBI -7.7642 0.71931 STATS LOCAL FORWARD -4.0342 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.67686 1.18328 1.40275 1.34382 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 0.00000 * 1 3.21219 2.67356 3.25556 0.15997 1 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 2 3.57161 0.11484 3.61499 2.92879 2 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 3 3.57161 0.11484 3.61499 2.92879 3 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 4 3.03000 3.70879 0.10473 3.62635 4 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 5 3.03000 3.70879 0.10473 3.62635 5 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 6 0.12693 3.50100 2.87985 3.41433 6 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 7 3.57161 0.11484 3.61499 2.92879 7 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 8 3.03000 3.70879 0.10473 3.62635 8 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 9 0.12693 3.50100 2.87985 3.41433 9 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 10 3.57161 0.11484 3.61499 2.92879 10 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 11 0.96974 2.19283 2.21176 0.91702 11 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 12 3.57161 0.11484 3.61499 2.92879 12 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 13 3.57161 0.11484 3.61499 2.92879 13 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 14 3.57161 0.11484 3.61499 2.92879 14 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 15 3.57161 0.11484 3.61499 2.92879 15 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 16 3.57161 0.11484 3.61499 2.92879 16 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 17 3.03000 3.70879 0.10473 3.62635 17 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 18 3.21219 2.67356 3.25556 0.15997 18 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 19 3.03000 3.70879 0.10473 3.62635 19 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 20 0.12693 3.50100 2.87985 3.41433 20 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 21 3.21219 2.67356 3.25556 0.15997 21 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 22 0.12693 3.50100 2.87985 3.41433 22 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 23 3.03000 3.70879 0.10473 3.62635 23 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 24 3.21219 2.67356 3.25556 0.15997 24 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 25 0.12693 3.50100 2.87985 3.41433 25 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 26 3.21219 2.67356 3.25556 0.15997 26 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 27 3.03000 3.70879 0.10473 3.62635 27 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 28 3.57161 0.11484 3.61499 2.92879 28 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 29 3.57161 0.11484 3.61499 2.92879 29 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 30 3.57161 0.11484 3.61499 2.92879 30 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 31 3.57161 0.11484 3.61499 2.92879 31 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 32 1.47566 2.79589 0.44584 2.65889 32 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 33 3.21219 2.67356 3.25556 0.15997 33 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 34 3.21219 2.67356 3.25556 0.15997 34 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 35 3.03000 3.70879 0.10473 3.62635 35 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 36 0.12693 3.50100 2.87985 3.41433 36 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 37 3.03000 3.70879 0.10473 3.62635 37 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 38 2.51005 1.14063 2.57971 0.64756 38 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 39 3.03000 3.70879 0.10473 3.62635 39 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 40 3.21219 2.67356 3.25556 0.15997 40 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 41 2.74743 0.40640 2.81541 1.56072 41 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 42 0.12693 3.50100 2.87985 3.41433 42 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 43 3.21219 2.67356 3.25556 0.15997 43 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 44 3.21219 2.67356 3.25556 0.15997 44 - - 1.38629 1.38629 1.38629 1.38629 0.03433 4.08186 4.08186 1.46634 0.26236 1.09861 0.40547 45 3.21219 2.67356 3.25556 0.15997 45 - - 1.38629 1.38629 1.38629 1.38629 0.01731 4.06484 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:15:49 2012 NSEQ 21 EFFN 3.273560 CKSUM 227994029 STATS LOCAL MSV -8.0538 0.71932 STATS LOCAL VITERBI -7.6828 0.71932 STATS LOCAL FORWARD -3.9064 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54913 1.52902 1.25194 1.25573 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 0.00000 * 1 2.93644 3.57164 0.11894 3.47464 1 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 2 3.41483 0.13241 3.46506 2.81567 2 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 3 0.14401 3.36441 2.79161 3.26457 3 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 4 3.41483 0.13241 3.46506 2.81567 4 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 5 3.41483 0.13241 3.46506 2.81567 5 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 6 3.07263 2.58497 3.12140 0.18127 6 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 7 3.07263 2.58497 3.12140 0.18127 7 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 8 3.41483 0.13241 3.46506 2.81567 8 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 9 3.07263 2.58497 3.12140 0.18127 9 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 10 2.93644 3.57164 0.11894 3.47464 10 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 11 2.93644 3.57164 0.11894 3.47464 11 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 12 3.07263 2.58497 3.12140 0.18127 12 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 13 0.14401 3.36441 2.79161 3.26457 13 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 14 3.07263 2.58497 3.12140 0.18127 14 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 15 3.07263 2.58497 3.12140 0.18127 15 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 16 3.41483 0.13241 3.46506 2.81567 16 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 17 3.41483 0.13241 3.46506 2.81567 17 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 18 2.93644 3.57164 0.11894 3.47464 18 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 19 2.93644 3.57164 0.11894 3.47464 19 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 20 0.14401 3.36441 2.79161 3.26457 20 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 21 0.14401 3.36441 2.79161 3.26457 21 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 22 2.93644 3.57164 0.11894 3.47464 22 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 23 2.93644 3.57164 0.11894 3.47464 23 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 24 3.07263 2.58497 3.12140 0.18127 24 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 25 0.14401 3.36441 2.79161 3.26457 25 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 26 3.07263 2.58497 3.12140 0.18127 26 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 27 2.93644 3.57164 0.11894 3.47464 27 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 28 3.41483 0.13241 3.46506 2.81567 28 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 29 3.41483 0.13241 3.46506 2.81567 29 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 30 3.41483 0.13241 3.46506 2.81567 30 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 31 2.93644 3.57164 0.11894 3.47464 31 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 32 2.93644 3.57164 0.11894 3.47464 32 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 33 3.07263 2.58497 3.12140 0.18127 33 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 34 3.07263 2.58497 3.12140 0.18127 34 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 35 2.93644 3.57164 0.11894 3.47464 35 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 36 0.14401 3.36441 2.79161 3.26457 36 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 37 2.93644 3.57164 0.11894 3.47464 37 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 38 3.07263 2.58497 3.12140 0.18127 38 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 39 0.14401 3.36441 2.79161 3.26457 39 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 40 3.07263 2.58497 3.12140 0.18127 40 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 41 3.07263 2.58497 3.12140 0.18127 41 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 42 0.14401 3.36441 2.79161 3.26457 42 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 43 3.07263 2.58497 3.12140 0.18127 43 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 44 2.93644 3.57164 0.11894 3.47464 44 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00251 4.00251 1.46634 0.26236 1.09861 0.40547 45 0.14401 3.36441 2.79161 3.26457 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98408 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:27 2012 NSEQ 34 EFFN 3.233154 CKSUM 1154514765 STATS LOCAL MSV -8.0542 0.71933 STATS LOCAL VITERBI -7.6005 0.71933 STATS LOCAL FORWARD -4.1707 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63509 1.32112 1.25696 1.37156 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 0.00000 * 1 3.05933 2.57650 3.10860 0.18347 1 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 2 3.05933 2.57650 3.10860 0.18347 2 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 3 2.92712 3.55815 0.12045 3.45977 3 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 4 3.39955 0.13428 3.45042 2.80450 4 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 5 0.14580 3.35117 2.78298 3.25009 5 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 6 3.39955 0.13428 3.45042 2.80450 6 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 7 3.39955 0.13428 3.45042 2.80450 7 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 8 2.92712 3.55815 0.12045 3.45977 8 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 9 3.39955 0.13428 3.45042 2.80450 9 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 10 3.39955 0.13428 3.45042 2.80450 10 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 11 3.39955 0.13428 3.45042 2.80450 11 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 12 3.05933 2.57650 3.10860 0.18347 12 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 13 3.39955 0.13428 3.45042 2.80450 13 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 14 3.05933 2.57650 3.10860 0.18347 14 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 15 3.39955 0.13428 3.45042 2.80450 15 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 16 2.92712 3.55815 0.12045 3.45977 16 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 17 2.92712 3.55815 0.12045 3.45977 17 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 18 2.92712 3.55815 0.12045 3.45977 18 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 19 0.14580 3.35117 2.78298 3.25009 19 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 20 2.92712 3.55815 0.12045 3.45977 20 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 21 3.05933 2.57650 3.10860 0.18347 21 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 22 2.92712 3.55815 0.12045 3.45977 22 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 23 2.92712 3.55815 0.12045 3.45977 23 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 24 3.05933 2.57650 3.10860 0.18347 24 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 25 0.14580 3.35117 2.78298 3.25009 25 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 26 3.39955 0.13428 3.45042 2.80450 26 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 27 2.92712 3.55815 0.12045 3.45977 27 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 28 3.05933 2.57650 3.10860 0.18347 28 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 29 3.39955 0.13428 3.45042 2.80450 29 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 30 3.39955 0.13428 3.45042 2.80450 30 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 31 2.92712 3.55815 0.12045 3.45977 31 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 32 0.14580 3.35117 2.78298 3.25009 32 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 33 3.05933 2.57650 3.10860 0.18347 33 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 34 3.05933 2.57650 3.10860 0.18347 34 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 35 2.92712 3.55815 0.12045 3.45977 35 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 36 0.14580 3.35117 2.78298 3.25009 36 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 37 2.92712 3.55815 0.12045 3.45977 37 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 38 2.96228 2.34704 3.01482 0.21866 38 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 39 2.92712 3.55815 0.12045 3.45977 39 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 40 3.05933 2.57650 3.10860 0.18347 40 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 41 3.39955 0.13428 3.45042 2.80450 41 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 42 0.14580 3.35117 2.78298 3.25009 42 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 43 3.05933 2.57650 3.10860 0.18347 43 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 44 0.14580 3.35117 2.78298 3.25009 44 - - 1.38629 1.38629 1.38629 1.38629 0.03751 3.99510 3.99510 1.46634 0.26236 1.09861 0.40547 45 0.14580 3.35117 2.78298 3.25009 45 - - 1.38629 1.38629 1.38629 1.38629 0.01893 3.97653 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:15:29 2012 NSEQ 46 EFFN 3.203491 CKSUM 3710830813 STATS LOCAL MSV -7.9651 0.71931 STATS LOCAL VITERBI -7.6060 0.71931 STATS LOCAL FORWARD -3.9595 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72063 1.38893 1.14226 1.37592 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 0.00000 * 1 2.92018 3.54810 0.12159 3.44870 1 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 2 3.38820 0.13570 3.43954 2.79618 2 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 3 0.14715 3.34133 2.77656 3.23934 3 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 4 3.38820 0.13570 3.43954 2.79618 4 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 5 3.38820 0.13570 3.43954 2.79618 5 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 6 3.38820 0.13570 3.43954 2.79618 6 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 7 3.04948 2.57022 3.09913 0.18511 7 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 8 3.38820 0.13570 3.43954 2.79618 8 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 9 3.04948 2.57022 3.09913 0.18511 9 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 10 2.92018 3.54810 0.12159 3.44870 10 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 11 2.92018 3.54810 0.12159 3.44870 11 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 12 3.04948 2.57022 3.09913 0.18511 12 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 13 0.14715 3.34133 2.77656 3.23934 13 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 14 3.04948 2.57022 3.09913 0.18511 14 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 15 3.04948 2.57022 3.09913 0.18511 15 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 16 3.38820 0.13570 3.43954 2.79618 16 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 17 3.38820 0.13570 3.43954 2.79618 17 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 18 2.92018 3.54810 0.12159 3.44870 18 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 19 2.92018 3.54810 0.12159 3.44870 19 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 20 0.14715 3.34133 2.77656 3.23934 20 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 21 2.92018 3.54810 0.12159 3.44870 21 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 22 2.92018 3.54810 0.12159 3.44870 22 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 23 2.92018 3.54810 0.12159 3.44870 23 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 24 3.04948 2.57022 3.09913 0.18511 24 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 25 0.14715 3.34133 2.77656 3.23934 25 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 26 3.04948 2.57022 3.09913 0.18511 26 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 27 2.92018 3.54810 0.12159 3.44870 27 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 28 3.38820 0.13570 3.43954 2.79618 28 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 29 3.38820 0.13570 3.43954 2.79618 29 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 30 3.38820 0.13570 3.43954 2.79618 30 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 31 2.92018 3.54810 0.12159 3.44870 31 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 32 2.92018 3.54810 0.12159 3.44870 32 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 33 3.04948 2.57022 3.09913 0.18511 33 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 34 3.04948 2.57022 3.09913 0.18511 34 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 35 2.92018 3.54810 0.12159 3.44870 35 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 36 0.14715 3.34133 2.77656 3.23934 36 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 37 2.92018 3.54810 0.12159 3.44870 37 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 38 3.04948 2.57022 3.09913 0.18511 38 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 39 2.92018 3.54810 0.12159 3.44870 39 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 40 3.04948 2.57022 3.09913 0.18511 40 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 41 3.38820 0.13570 3.43954 2.79618 41 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 42 0.14715 3.34133 2.77656 3.23934 42 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 43 3.04948 2.57022 3.09913 0.18511 43 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 44 2.92018 3.54810 0.12159 3.44870 44 - - 1.38629 1.38629 1.38629 1.38629 0.03772 3.98963 3.98963 1.46634 0.26236 1.09861 0.40547 45 0.14715 3.34133 2.77656 3.23934 45 - - 1.38629 1.38629 1.38629 1.38629 0.01904 3.97095 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:15:14 2012 NSEQ 79 EFFN 3.167908 CKSUM 3550214454 STATS LOCAL MSV -7.9545 0.71932 STATS LOCAL VITERBI -7.8082 0.71932 STATS LOCAL FORWARD -3.9919 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81952 1.32635 1.09128 1.44112 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 0.00000 * 1 2.91171 3.53590 0.12300 3.43526 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 2 3.37442 0.13743 3.42633 2.78607 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 3 2.91171 3.53590 0.12300 3.43526 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 4 3.37442 0.13743 3.42633 2.78607 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 5 3.37442 0.13743 3.42633 2.78607 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 6 3.37442 0.13743 3.42633 2.78607 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 7 3.03756 2.56262 3.08766 0.18713 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 8 3.37442 0.13743 3.42633 2.78607 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 9 3.03756 2.56262 3.08766 0.18713 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 10 2.91171 3.53590 0.12300 3.43526 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 11 2.91171 3.53590 0.12300 3.43526 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 12 3.03756 2.56262 3.08766 0.18713 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 13 0.14880 3.32941 2.76876 3.22630 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 14 3.03756 2.56262 3.08766 0.18713 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 15 3.03756 2.56262 3.08766 0.18713 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 16 3.37442 0.13743 3.42633 2.78607 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 17 3.37442 0.13743 3.42633 2.78607 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 18 2.91171 3.53590 0.12300 3.43526 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 19 2.91171 3.53590 0.12300 3.43526 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 20 0.14880 3.32941 2.76876 3.22630 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 21 2.91171 3.53590 0.12300 3.43526 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 22 2.91171 3.53590 0.12300 3.43526 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 23 2.91171 3.53590 0.12300 3.43526 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 24 3.37442 0.13743 3.42633 2.78607 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 25 0.14880 3.32941 2.76876 3.22630 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 26 3.03756 2.56262 3.08766 0.18713 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 27 2.91171 3.53590 0.12300 3.43526 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 28 3.37442 0.13743 3.42633 2.78607 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 29 3.37442 0.13743 3.42633 2.78607 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 30 3.37442 0.13743 3.42633 2.78607 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 31 2.91171 3.53590 0.12300 3.43526 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 32 2.91171 3.53590 0.12300 3.43526 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 33 3.03756 2.56262 3.08766 0.18713 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 34 3.03756 2.56262 3.08766 0.18713 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 35 2.91171 3.53590 0.12300 3.43526 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 36 0.14880 3.32941 2.76876 3.22630 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 37 2.91171 3.53590 0.12300 3.43526 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 38 3.03756 2.56262 3.08766 0.18713 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 39 2.91171 3.53590 0.12300 3.43526 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 40 3.03756 2.56262 3.08766 0.18713 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 41 3.37442 0.13743 3.42633 2.78607 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 42 0.14880 3.32941 2.76876 3.22630 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 43 3.03756 2.56262 3.08766 0.18713 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 44 2.91171 3.53590 0.12300 3.43526 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98302 3.98302 1.46634 0.26236 1.09861 0.40547 45 0.14880 3.32941 2.76876 3.22630 45 - - 1.38629 1.38629 1.38629 1.38629 0.01917 3.96422 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:49 2012 NSEQ 9 EFFN 3.291504 CKSUM 447960315 STATS LOCAL MSV -8.0375 0.71931 STATS LOCAL VITERBI -7.7666 0.71931 STATS LOCAL FORWARD -4.4115 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81791 1.60663 1.14058 1.14747 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 0.00000 * 1 3.07849 2.58870 3.12703 0.18032 1 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 2 2.94052 3.57756 0.11828 3.48118 2 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 3 3.42154 0.13160 3.47149 2.82057 3 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 4 0.14323 3.37023 2.79540 3.27094 4 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 5 3.42154 0.13160 3.47149 2.82057 5 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 6 3.07849 2.58870 3.12703 0.18032 6 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 7 2.94052 3.57756 0.11828 3.48118 7 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 8 0.14323 3.37023 2.79540 3.27094 8 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 9 3.42154 0.13160 3.47149 2.82057 9 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 10 3.07849 2.58870 3.12703 0.18032 10 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 11 3.42154 0.13160 3.47149 2.82057 11 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 12 3.42154 0.13160 3.47149 2.82057 12 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 13 3.42154 0.13160 3.47149 2.82057 13 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 14 3.07849 2.58870 3.12703 0.18032 14 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 15 3.07849 2.58870 3.12703 0.18032 15 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 16 2.94052 3.57756 0.11828 3.48118 16 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 17 2.94052 3.57756 0.11828 3.48118 17 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 18 2.94052 3.57756 0.11828 3.48118 18 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 19 2.94052 3.57756 0.11828 3.48118 19 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 20 3.07849 2.58870 3.12703 0.18032 20 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 21 3.07849 2.58870 3.12703 0.18032 21 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 22 2.94052 3.57756 0.11828 3.48118 22 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 23 2.94052 3.57756 0.11828 3.48118 23 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 24 3.07849 2.58870 3.12703 0.18032 24 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 25 0.14323 3.37023 2.79540 3.27094 25 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 26 3.07849 2.58870 3.12703 0.18032 26 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 27 2.94052 3.57756 0.11828 3.48118 27 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 28 3.07849 2.58870 3.12703 0.18032 28 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 29 2.94052 3.57756 0.11828 3.48118 29 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 30 2.94052 3.57756 0.11828 3.48118 30 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 31 2.94052 3.57756 0.11828 3.48118 31 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 32 0.14323 3.37023 2.79540 3.27094 32 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 33 3.07849 2.58870 3.12703 0.18032 33 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 34 3.07849 2.58870 3.12703 0.18032 34 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 35 2.94052 3.57756 0.11828 3.48118 35 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 36 0.14323 3.37023 2.79540 3.27094 36 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 37 2.94052 3.57756 0.11828 3.48118 37 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 38 3.42154 0.13160 3.47149 2.82057 38 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 39 2.94052 3.57756 0.11828 3.48118 39 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 40 3.07849 2.58870 3.12703 0.18032 40 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 41 3.42154 0.13160 3.47149 2.82057 41 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 42 0.14323 3.37023 2.79540 3.27094 42 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 43 3.07849 2.58870 3.12703 0.18032 43 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 44 3.07849 2.58870 3.12703 0.18032 44 - - 1.38629 1.38629 1.38629 1.38629 0.03710 4.00579 4.00579 1.46634 0.26236 1.09861 0.40547 45 3.07849 2.58870 3.12703 0.18032 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98741 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:14:41 2012 NSEQ 26 EFFN 3.354736 CKSUM 4045893695 STATS LOCAL MSV -8.1217 0.71933 STATS LOCAL VITERBI -7.7415 0.71933 STATS LOCAL FORWARD -4.1202 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45440 1.38814 1.28009 1.43168 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 0.00000 * 1 3.09893 2.60170 3.14669 0.17702 1 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 2 3.09893 2.60170 3.14669 0.17702 2 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 3 2.95464 3.59810 0.11603 3.50385 3 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 4 3.44487 0.12881 3.49383 2.83755 4 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 5 0.14055 3.39047 2.80855 3.29310 5 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 6 3.44487 0.12881 3.49383 2.83755 6 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 7 3.44487 0.12881 3.49383 2.83755 7 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 8 2.95464 3.59810 0.11603 3.50385 8 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 9 3.44487 0.12881 3.49383 2.83755 9 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 10 3.44487 0.12881 3.49383 2.83755 10 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 11 3.44487 0.12881 3.49383 2.83755 11 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 12 3.09893 2.60170 3.14669 0.17702 12 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 13 3.09893 2.60170 3.14669 0.17702 13 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 14 0.14055 3.39047 2.80855 3.29310 14 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 15 3.09893 2.60170 3.14669 0.17702 15 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 16 2.95464 3.59810 0.11603 3.50385 16 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 17 2.95464 3.59810 0.11603 3.50385 17 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 18 2.95464 3.59810 0.11603 3.50385 18 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 19 0.14055 3.39047 2.80855 3.29310 19 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 20 2.95464 3.59810 0.11603 3.50385 20 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 21 3.09893 2.60170 3.14669 0.17702 21 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 22 2.95464 3.59810 0.11603 3.50385 22 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 23 2.95464 3.59810 0.11603 3.50385 23 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 24 3.09893 2.60170 3.14669 0.17702 24 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 25 0.14055 3.39047 2.80855 3.29310 25 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 26 3.44487 0.12881 3.49383 2.83755 26 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 27 1.32523 2.64731 0.54172 2.50509 27 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 28 3.44487 0.12881 3.49383 2.83755 28 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 29 3.44487 0.12881 3.49383 2.83755 29 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 30 3.44487 0.12881 3.49383 2.83755 30 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 31 2.41850 3.31730 0.18128 3.20662 31 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 32 0.14055 3.39047 2.80855 3.29310 32 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 33 3.09893 2.60170 3.14669 0.17702 33 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 34 3.09893 2.60170 3.14669 0.17702 34 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 35 2.95464 3.59810 0.11603 3.50385 35 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 36 0.14055 3.39047 2.80855 3.29310 36 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 37 2.95464 3.59810 0.11603 3.50385 37 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 38 0.14055 3.39047 2.80855 3.29310 38 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 39 2.95464 3.59810 0.11603 3.50385 39 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 40 3.09893 2.60170 3.14669 0.17702 40 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 41 3.44487 0.12881 3.49383 2.83755 41 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 42 0.14055 3.39047 2.80855 3.29310 42 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 43 3.09893 2.60170 3.14669 0.17702 43 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 44 0.14055 3.39047 2.80855 3.29310 44 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01724 4.01724 1.46634 0.26236 1.09861 0.40547 45 0.14055 3.39047 2.80855 3.29310 45 - - 1.38629 1.38629 1.38629 1.38629 0.01850 3.99907 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Tu_58S_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 14:11:19 2012 NSEQ 46 EFFN 3.293335 CKSUM 771223492 STATS LOCAL MSV -8.2205 0.71933 STATS LOCAL VITERBI -7.6567 0.71933 STATS LOCAL FORWARD -4.0365 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81845 1.08779 1.39104 1.37855 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 0.00000 * 1 0.14315 3.37082 2.79579 3.27159 1 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 2 3.42222 0.13151 3.47214 2.82107 2 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 3 3.42222 0.13151 3.47214 2.82107 3 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 4 2.94093 3.57817 0.11821 3.48184 4 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 5 3.42222 0.13151 3.47214 2.82107 5 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 6 2.94093 3.57817 0.11821 3.48184 6 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 7 3.42222 0.13151 3.47214 2.82107 7 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 8 3.42222 0.13151 3.47214 2.82107 8 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 9 3.42222 0.13151 3.47214 2.82107 9 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 10 3.07909 2.58908 3.12761 0.18022 10 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 11 0.14315 3.37082 2.79579 3.27159 11 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 12 0.14315 3.37082 2.79579 3.27159 12 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 13 1.85450 2.29279 2.49389 0.41567 13 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 14 3.42222 0.13151 3.47214 2.82107 14 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 15 3.42222 0.13151 3.47214 2.82107 15 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 16 2.94093 3.57817 0.11821 3.48184 16 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 17 2.94093 3.57817 0.11821 3.48184 17 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 18 3.42222 0.13151 3.47214 2.82107 18 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 19 3.07909 2.58908 3.12761 0.18022 19 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 20 2.94093 3.57817 0.11821 3.48184 20 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 21 3.42222 0.13151 3.47214 2.82107 21 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 22 2.94093 3.57817 0.11821 3.48184 22 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 23 2.94093 3.57817 0.11821 3.48184 23 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 24 3.07909 2.58908 3.12761 0.18022 24 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 25 0.14315 3.37082 2.79579 3.27159 25 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 26 3.07909 2.58908 3.12761 0.18022 26 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 27 2.94093 3.57817 0.11821 3.48184 27 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 28 3.42222 0.13151 3.47214 2.82107 28 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 29 3.42222 0.13151 3.47214 2.82107 29 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 30 3.42222 0.13151 3.47214 2.82107 30 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 31 3.42222 0.13151 3.47214 2.82107 31 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 32 3.07909 2.58908 3.12761 0.18022 32 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 33 3.07909 2.58908 3.12761 0.18022 33 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 34 3.07909 2.58908 3.12761 0.18022 34 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 35 2.94093 3.57817 0.11821 3.48184 35 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 36 0.14315 3.37082 2.79579 3.27159 36 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 37 2.94093 3.57817 0.11821 3.48184 37 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 38 3.42222 0.13151 3.47214 2.82107 38 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 39 2.94093 3.57817 0.11821 3.48184 39 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 40 3.07909 2.58908 3.12761 0.18022 40 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 41 3.42222 0.13151 3.47214 2.82107 41 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 42 0.14315 3.37082 2.79579 3.27159 42 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 43 3.07909 2.58908 3.12761 0.18022 43 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 44 3.07909 2.58908 3.12761 0.18022 44 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00612 4.00612 1.46634 0.26236 1.09861 0.40547 45 3.07909 2.58908 3.12761 0.18022 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98775 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:46:28 2012 NSEQ 15 EFFN 3.555908 CKSUM 3307981999 STATS LOCAL MSV -7.3697 0.71932 STATS LOCAL VITERBI -7.7916 0.71932 STATS LOCAL FORWARD -4.0667 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.84066 1.25168 1.24640 1.31779 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 0.00000 * 1 2.99700 3.66014 0.10954 3.57244 1 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 2 3.51569 0.12078 3.56157 2.88874 2 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 3 2.99700 3.66014 0.10954 3.57244 3 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 4 3.51569 0.12078 3.56157 2.88874 4 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 5 3.51569 0.12078 3.56157 2.88874 5 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 6 3.51569 0.12078 3.56157 2.88874 6 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 7 2.99700 3.66014 0.10954 3.57244 7 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 8 2.65175 0.46251 2.72141 1.45248 8 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 9 2.83612 1.92482 2.89418 0.30097 9 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 10 0.13276 3.45211 2.84839 3.36066 10 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 11 2.99700 3.66014 0.10954 3.57244 11 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 12 2.97860 2.21233 3.03114 0.23391 12 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 13 0.13276 3.45211 2.84839 3.36066 13 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 14 2.74011 1.74021 2.80161 0.35776 14 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 15 3.16173 2.64157 3.20706 0.16733 15 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 16 3.51569 0.12078 3.56157 2.88874 16 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 17 3.16173 2.64157 3.20706 0.16733 17 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 18 0.25542 3.06338 2.07018 2.94663 18 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 19 2.99700 3.66014 0.10954 3.57244 19 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 20 3.51569 0.12078 3.56157 2.88874 20 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 21 2.99700 3.66014 0.10954 3.57244 21 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 22 2.99700 3.66014 0.10954 3.57244 22 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 23 2.99700 3.66014 0.10954 3.57244 23 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 24 3.51569 0.12078 3.56157 2.88874 24 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 25 0.13276 3.45211 2.84839 3.36066 25 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 26 3.16173 2.64157 3.20706 0.16733 26 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 27 2.99700 3.66014 0.10954 3.57244 27 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 28 3.51569 0.12078 3.56157 2.88874 28 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 29 3.51569 0.12078 3.56157 2.88874 29 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 30 3.16173 2.64157 3.20706 0.16733 30 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 31 2.99700 3.66014 0.10954 3.57244 31 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 32 3.16173 2.64157 3.20706 0.16733 32 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 33 2.98253 2.22067 3.03491 0.23228 33 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 34 3.51569 0.12078 3.56157 2.88874 34 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 35 2.99700 3.66014 0.10954 3.57244 35 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 36 0.13276 3.45211 2.84839 3.36066 36 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 37 2.99700 3.66014 0.10954 3.57244 37 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 38 3.51569 0.12078 3.56157 2.88874 38 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 39 2.99700 3.66014 0.10954 3.57244 39 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 40 3.16173 2.64157 3.20706 0.16733 40 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 41 3.51569 0.12078 3.56157 2.88874 41 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 42 0.13276 3.45211 2.84839 3.36066 42 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 43 3.16173 2.64157 3.20706 0.16733 43 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 44 3.16173 2.64157 3.20706 0.16733 44 - - 1.38629 1.38629 1.38629 1.38629 0.03536 4.05281 4.05281 1.46634 0.26236 1.09861 0.40547 45 3.16173 2.64157 3.20706 0.16733 45 - - 1.38629 1.38629 1.38629 1.38629 0.01784 4.03529 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:12 2012 NSEQ 2 EFFN 2.000000 CKSUM 1724843271 STATS LOCAL MSV -7.7061 0.72856 STATS LOCAL VITERBI -8.2545 0.72856 STATS LOCAL FORWARD -3.5133 0.72856 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63446 1.33409 1.26157 1.35351 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.03732 1.95876 1.96551 1.00928 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_eighty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:50 2012 NSEQ 2 EFFN 2.000000 CKSUM 1633184760 STATS LOCAL MSV -7.5886 0.72993 STATS LOCAL VITERBI -8.4622 0.72993 STATS LOCAL FORWARD -3.2104 0.72993 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21109 1.87672 1.59719 1.05967 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.92825 2.28391 0.95698 2.13014 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_eightyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:58 2012 NSEQ 7 EFFN 3.120605 CKSUM 2942515715 STATS LOCAL MSV -8.0916 0.71933 STATS LOCAL VITERBI -7.6121 0.71933 STATS LOCAL FORWARD -4.1184 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.71913 1.33450 1.04070 1.58825 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 0.00000 * 1 2.90025 3.51940 0.12492 3.41710 1 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 2 3.35584 0.13982 3.40850 2.77239 2 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 3 2.90025 3.51940 0.12492 3.41710 3 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 4 3.35584 0.13982 3.40850 2.77239 4 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 5 2.90025 3.51940 0.12492 3.41710 5 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 6 2.90025 3.51940 0.12492 3.41710 6 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 7 3.02155 2.55238 3.07224 0.18988 7 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 8 0.15106 3.31333 2.75822 3.20874 8 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 9 3.02155 2.55238 3.07224 0.18988 9 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 10 2.90025 3.51940 0.12492 3.41710 10 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 11 2.90025 3.51940 0.12492 3.41710 11 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 12 3.35584 0.13982 3.40850 2.77239 12 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 13 0.15106 3.31333 2.75822 3.20874 13 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 14 3.02155 2.55238 3.07224 0.18988 14 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 15 3.02155 2.55238 3.07224 0.18988 15 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 16 3.35584 0.13982 3.40850 2.77239 16 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 17 3.35584 0.13982 3.40850 2.77239 17 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 18 2.90025 3.51940 0.12492 3.41710 18 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 19 3.02155 2.55238 3.07224 0.18988 19 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 20 0.15106 3.31333 2.75822 3.20874 20 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 21 3.35584 0.13982 3.40850 2.77239 21 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 22 3.35584 0.13982 3.40850 2.77239 22 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 23 2.90025 3.51940 0.12492 3.41710 23 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 24 3.35584 0.13982 3.40850 2.77239 24 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 25 0.15106 3.31333 2.75822 3.20874 25 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 26 3.35584 0.13982 3.40850 2.77239 26 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 27 2.90025 3.51940 0.12492 3.41710 27 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 28 2.90025 3.51940 0.12492 3.41710 28 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 29 0.15106 3.31333 2.75822 3.20874 29 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 30 3.02155 2.55238 3.07224 0.18988 30 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 31 2.90025 3.51940 0.12492 3.41710 31 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 32 2.90025 3.51940 0.12492 3.41710 32 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 33 0.15106 3.31333 2.75822 3.20874 33 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 34 2.90025 3.51940 0.12492 3.41710 34 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 35 2.90025 3.51940 0.12492 3.41710 35 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 36 0.15106 3.31333 2.75822 3.20874 36 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 37 2.90025 3.51940 0.12492 3.41710 37 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 38 3.35584 0.13982 3.40850 2.77239 38 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 39 2.90025 3.51940 0.12492 3.41710 39 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 40 3.02155 2.55238 3.07224 0.18988 40 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 41 2.90025 3.51940 0.12492 3.41710 41 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 42 3.02155 2.55238 3.07224 0.18988 42 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 43 3.02155 2.55238 3.07224 0.18988 43 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 44 3.35584 0.13982 3.40850 2.77239 44 - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97417 3.97417 1.46634 0.26236 1.09861 0.40547 45 3.35584 0.13982 3.40850 2.77239 45 - - 1.38629 1.38629 1.38629 1.38629 0.01934 3.95520 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:47:03 2012 NSEQ 16 EFFN 4.003906 CKSUM 372857925 STATS LOCAL MSV -7.0006 0.71932 STATS LOCAL VITERBI -7.7597 0.71932 STATS LOCAL FORWARD -4.1325 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.68630 1.38129 1.35092 1.18895 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 0.00000 * 1 3.07941 3.78200 0.09794 3.70762 1 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 2 3.65632 0.10647 3.69581 2.98897 2 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 3 3.07941 3.78200 0.09794 3.70762 3 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 4 3.65632 0.10647 3.69581 2.98897 4 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 5 3.65632 0.10647 3.69581 2.98897 5 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 6 3.29032 2.72312 3.33061 0.14929 6 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 7 0.37762 2.89581 1.62725 2.76799 7 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 8 0.38115 2.89050 1.61829 2.76239 8 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 9 2.58702 1.21331 2.65504 0.58474 9 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 10 0.17862 3.35385 2.40641 3.25741 10 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 11 3.07941 3.78200 0.09794 3.70762 11 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 12 3.29032 2.72312 3.33061 0.14929 12 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 13 0.11859 3.57556 2.92772 3.49628 13 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 14 3.29032 2.72312 3.33061 0.14929 14 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 15 3.29032 2.72312 3.33061 0.14929 15 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 16 3.65632 0.10647 3.69581 2.98897 16 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 17 3.09042 2.23013 3.13963 0.21852 17 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 18 3.07941 3.78200 0.09794 3.70762 18 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 19 2.73240 1.53230 2.79555 0.41883 19 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 20 2.73627 1.53977 2.79930 0.41566 20 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 21 0.11859 3.57556 2.92772 3.49628 21 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 22 3.07941 3.78200 0.09794 3.70762 22 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 23 3.07941 3.78200 0.09794 3.70762 23 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 24 3.65632 0.10647 3.69581 2.98897 24 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 25 0.11859 3.57556 2.92772 3.49628 25 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 26 3.29032 2.72312 3.33061 0.14929 26 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 27 3.07941 3.78200 0.09794 3.70762 27 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 28 3.65632 0.10647 3.69581 2.98897 28 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 29 3.65632 0.10647 3.69581 2.98897 29 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 30 3.29032 2.72312 3.33061 0.14929 30 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 31 3.07941 3.78200 0.09794 3.70762 31 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 32 3.29032 2.72312 3.33061 0.14929 32 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 33 2.73240 1.53230 2.79555 0.41883 33 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 34 3.65632 0.10647 3.69581 2.98897 34 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 35 3.07941 3.78200 0.09794 3.70762 35 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 36 0.11859 3.57556 2.92772 3.49628 36 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 37 3.07941 3.78200 0.09794 3.70762 37 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 38 3.65632 0.10647 3.69581 2.98897 38 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 39 3.07941 3.78200 0.09794 3.70762 39 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 40 3.29032 2.72312 3.33061 0.14929 40 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 41 3.65632 0.10647 3.69581 2.98897 41 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 42 0.11859 3.57556 2.92772 3.49628 42 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 43 3.29032 2.72312 3.33061 0.14929 43 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 44 3.29032 2.72312 3.33061 0.14929 44 - - 1.38629 1.38629 1.38629 1.38629 0.03277 4.12776 4.12776 1.46634 0.26236 1.09861 0.40547 45 3.29032 2.72312 3.33061 0.14929 45 - - 1.38629 1.38629 1.38629 1.38629 0.01652 4.11151 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:48:27 2012 NSEQ 4 EFFN 3.238281 CKSUM 701941785 STATS LOCAL MSV -8.1331 0.71932 STATS LOCAL VITERBI -7.7042 0.71932 STATS LOCAL FORWARD -4.0851 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82956 1.19546 1.32376 1.30631 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 3.40150 0.13404 3.45229 2.80593 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 2.92831 3.55987 0.12026 3.46167 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 3.40150 0.13404 3.45229 2.80593 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.40150 0.13404 3.45229 2.80593 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 3.06103 2.57758 3.11024 0.18319 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 2.92831 3.55987 0.12026 3.46167 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 3.40150 0.13404 3.45229 2.80593 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.06103 2.57758 3.11024 0.18319 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 2.92831 3.55987 0.12026 3.46167 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 2.92831 3.55987 0.12026 3.46167 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 3.40150 0.13404 3.45229 2.80593 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 3.06103 2.57758 3.11024 0.18319 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 0.14557 3.35286 2.78409 3.25194 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 3.06103 2.57758 3.11024 0.18319 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 3.40150 0.13404 3.45229 2.80593 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 3.06103 2.57758 3.11024 0.18319 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 0.14557 3.35286 2.78409 3.25194 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 2.92831 3.55987 0.12026 3.46167 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 3.40150 0.13404 3.45229 2.80593 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 0.14557 3.35286 2.78409 3.25194 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 2.92831 3.55987 0.12026 3.46167 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 2.92831 3.55987 0.12026 3.46167 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 3.40150 0.13404 3.45229 2.80593 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 0.14557 3.35286 2.78409 3.25194 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 3.06103 2.57758 3.11024 0.18319 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 2.92831 3.55987 0.12026 3.46167 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.40150 0.13404 3.45229 2.80593 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 3.06103 2.57758 3.11024 0.18319 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 2.92831 3.55987 0.12026 3.46167 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 3.06103 2.57758 3.11024 0.18319 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 3.40150 0.13404 3.45229 2.80593 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 3.40150 0.13404 3.45229 2.80593 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 2.92831 3.55987 0.12026 3.46167 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 0.14557 3.35286 2.78409 3.25194 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 2.92831 3.55987 0.12026 3.46167 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.40150 0.13404 3.45229 2.80593 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 2.92831 3.55987 0.12026 3.46167 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 3.06103 2.57758 3.11024 0.18319 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 3.40150 0.13404 3.45229 2.80593 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 0.14557 3.35286 2.78409 3.25194 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 3.06103 2.57758 3.11024 0.18319 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 3.06103 2.57758 3.11024 0.18319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 3.06103 2.57758 3.11024 0.18319 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fifty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:00:25 2012 NSEQ 5 EFFN 3.276367 CKSUM 1997056284 STATS LOCAL MSV -7.8981 0.71932 STATS LOCAL VITERBI -7.7982 0.71932 STATS LOCAL FORWARD -3.9718 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.69966 1.20121 1.19694 1.54034 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 0.00000 * 1 3.41588 0.13228 3.46607 2.81644 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 2 3.07355 2.58556 3.12228 0.18112 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 3 3.41588 0.13228 3.46607 2.81644 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 4 3.41588 0.13228 3.46607 2.81644 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 5 3.07355 2.58556 3.12228 0.18112 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 6 2.93708 3.57257 0.11883 3.47567 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 7 2.93708 3.57257 0.11883 3.47567 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 8 0.14388 3.36532 2.79221 3.26557 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 9 3.41588 0.13228 3.46607 2.81644 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 10 3.07355 2.58556 3.12228 0.18112 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 11 3.07355 2.58556 3.12228 0.18112 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 12 1.16980 2.13382 2.18471 0.77941 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 13 3.41588 0.13228 3.46607 2.81644 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 14 0.14388 3.36532 2.79221 3.26557 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 15 3.07355 2.58556 3.12228 0.18112 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 16 3.41588 0.13228 3.46607 2.81644 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 17 3.41588 0.13228 3.46607 2.81644 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 18 2.93708 3.57257 0.11883 3.47567 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 19 2.93708 3.57257 0.11883 3.47567 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 20 0.14388 3.36532 2.79221 3.26557 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 21 2.93708 3.57257 0.11883 3.47567 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 22 0.14388 3.36532 2.79221 3.26557 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 23 2.93708 3.57257 0.11883 3.47567 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 24 3.41588 0.13228 3.46607 2.81644 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 25 0.14388 3.36532 2.79221 3.26557 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 26 3.07355 2.58556 3.12228 0.18112 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 27 2.93708 3.57257 0.11883 3.47567 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 28 3.41588 0.13228 3.46607 2.81644 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 29 3.41588 0.13228 3.46607 2.81644 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 30 3.07355 2.58556 3.12228 0.18112 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 31 2.93708 3.57257 0.11883 3.47567 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 32 3.07355 2.58556 3.12228 0.18112 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 33 3.41588 0.13228 3.46607 2.81644 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 34 3.07355 2.58556 3.12228 0.18112 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 35 2.93708 3.57257 0.11883 3.47567 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 36 0.14388 3.36532 2.79221 3.26557 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 37 2.93708 3.57257 0.11883 3.47567 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 38 2.93708 3.57257 0.11883 3.47567 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 39 2.93708 3.57257 0.11883 3.47567 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 40 3.41588 0.13228 3.46607 2.81644 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 41 3.41588 0.13228 3.46607 2.81644 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 42 2.93708 3.57257 0.11883 3.47567 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 43 3.41588 0.13228 3.46607 2.81644 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 44 2.93708 3.57257 0.11883 3.47567 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 45 0.14388 3.36532 2.79221 3.26557 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98460 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:01:50 2012 NSEQ 2 EFFN 2.000000 CKSUM 1699613320 STATS LOCAL MSV -7.6318 0.72711 STATS LOCAL VITERBI -8.2020 0.72711 STATS LOCAL FORWARD -3.3903 0.72711 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74442 1.24775 1.07836 1.61972 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:01:18 2012 NSEQ 2 EFFN 2.000000 CKSUM 1683601753 STATS LOCAL MSV -7.3424 0.72822 STATS LOCAL VITERBI -8.3200 0.72822 STATS LOCAL FORWARD -3.5354 0.72822 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51481 1.45293 1.31923 1.27682 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:01:08 2012 NSEQ 18 EFFN 3.792480 CKSUM 1836593675 STATS LOCAL MSV -7.5573 0.71932 STATS LOCAL VITERBI -7.7354 0.71932 STATS LOCAL FORWARD -4.1258 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22706 1.98680 1.67801 0.95980 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 0.00000 * 1 0.12480 3.51954 2.89175 3.43470 1 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 2 3.59274 0.11268 3.63516 2.94385 2 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 3 3.23149 2.68579 3.27409 0.15726 3 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 4 3.23149 2.68579 3.27409 0.15726 4 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 5 3.23149 2.68579 3.27409 0.15726 5 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 6 3.23149 2.68579 3.27409 0.15726 6 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 7 2.66915 1.49817 2.73378 0.44289 7 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 8 3.23149 2.68579 3.27409 0.15726 8 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 9 0.22785 3.17257 2.16193 3.06277 9 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 10 3.04238 3.72710 0.10299 3.64667 10 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 11 3.23149 2.68579 3.27409 0.15726 11 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 12 3.23149 2.68579 3.27409 0.15726 12 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 13 3.23149 2.68579 3.27409 0.15726 13 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 14 0.12480 3.51954 2.89175 3.43470 14 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 15 3.59274 0.11268 3.63516 2.94385 15 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 16 2.93327 2.00594 2.98835 0.27198 16 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 17 0.12480 3.51954 2.89175 3.43470 17 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 18 0.40741 2.82094 1.57420 2.68965 18 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 19 0.12480 3.51954 2.89175 3.43470 19 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 20 0.12480 3.51954 2.89175 3.43470 20 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 21 0.12480 3.51954 2.89175 3.43470 21 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 22 0.12480 3.51954 2.89175 3.43470 22 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 23 3.04238 3.72710 0.10299 3.64667 23 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 24 3.23149 2.68579 3.27409 0.15726 24 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 25 0.12480 3.51954 2.89175 3.43470 25 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 26 3.23149 2.68579 3.27409 0.15726 26 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 27 3.04238 3.72710 0.10299 3.64667 27 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 28 3.23149 2.68579 3.27409 0.15726 28 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 29 3.59274 0.11268 3.63516 2.94385 29 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 30 3.23149 2.68579 3.27409 0.15726 30 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 31 3.04238 3.72710 0.10299 3.64667 31 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 32 3.23149 2.68579 3.27409 0.15726 32 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 33 3.23149 2.68579 3.27409 0.15726 33 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 34 3.23149 2.68579 3.27409 0.15726 34 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 35 3.04238 3.72710 0.10299 3.64667 35 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 36 0.12480 3.51954 2.89175 3.43470 36 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 37 3.04238 3.72710 0.10299 3.64667 37 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 38 3.23149 2.68579 3.27409 0.15726 38 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 39 0.12480 3.51954 2.89175 3.43470 39 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 40 3.23149 2.68579 3.27409 0.15726 40 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 41 3.59274 0.11268 3.63516 2.94385 41 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 42 0.12480 3.51954 2.89175 3.43470 42 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 43 3.04238 3.72710 0.10299 3.64667 43 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 44 3.23149 2.68579 3.27409 0.15726 44 - - 1.38629 1.38629 1.38629 1.38629 0.03394 4.09309 4.09309 1.46634 0.26236 1.09861 0.40547 45 0.12480 3.51954 2.89175 3.43470 45 - - 1.38629 1.38629 1.38629 1.38629 0.01712 4.07626 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:02:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 4233284767 STATS LOCAL MSV -7.5002 0.72906 STATS LOCAL VITERBI -8.3932 0.72906 STATS LOCAL FORWARD -3.4475 0.72906 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62242 1.33410 1.22570 1.40393 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 1.89532 1.96405 1.06955 1.00436 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.92825 2.28391 0.95698 2.13014 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.81865 0.23582 2.88868 2.35662 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:00:39 2012 NSEQ 13 EFFN 3.265869 CKSUM 2943553555 STATS LOCAL MSV -8.1085 0.71931 STATS LOCAL VITERBI -7.6873 0.71931 STATS LOCAL FORWARD -3.9961 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62800 1.32403 1.11179 1.56711 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 0.00000 * 1 3.41194 0.13276 3.46229 2.81356 1 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 2 3.41194 0.13276 3.46229 2.81356 2 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 3 3.41194 0.13276 3.46229 2.81356 3 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 4 2.16492 2.29577 0.63252 1.37316 4 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 5 2.93468 3.56909 0.11922 3.47183 5 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 6 3.41194 0.13276 3.46229 2.81356 6 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 7 0.14434 3.36190 2.78998 3.26183 7 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 8 2.93468 3.56909 0.11922 3.47183 8 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 9 0.14434 3.36190 2.78998 3.26183 9 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 10 3.07011 2.58337 3.11897 0.18169 10 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 11 3.41194 0.13276 3.46229 2.81356 11 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 12 3.07011 2.58337 3.11897 0.18169 12 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 13 0.14434 3.36190 2.78998 3.26183 13 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 14 0.14434 3.36190 2.78998 3.26183 14 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 15 3.07011 2.58337 3.11897 0.18169 15 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 16 3.41194 0.13276 3.46229 2.81356 16 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 17 3.07011 2.58337 3.11897 0.18169 17 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 18 2.93468 3.56909 0.11922 3.47183 18 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 19 2.93468 3.56909 0.11922 3.47183 19 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 20 2.93468 3.56909 0.11922 3.47183 20 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 21 2.93468 3.56909 0.11922 3.47183 21 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 22 0.14434 3.36190 2.78998 3.26183 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 23 2.93468 3.56909 0.11922 3.47183 23 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 24 3.41194 0.13276 3.46229 2.81356 24 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 25 0.14434 3.36190 2.78998 3.26183 25 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 26 3.07011 2.58337 3.11897 0.18169 26 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 27 2.93468 3.56909 0.11922 3.47183 27 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 28 3.41194 0.13276 3.46229 2.81356 28 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 29 3.41194 0.13276 3.46229 2.81356 29 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 30 3.07011 2.58337 3.11897 0.18169 30 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 31 2.93468 3.56909 0.11922 3.47183 31 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 32 3.07011 2.58337 3.11897 0.18169 32 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 33 3.07011 2.58337 3.11897 0.18169 33 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 34 3.07011 2.58337 3.11897 0.18169 34 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 35 2.93468 3.56909 0.11922 3.47183 35 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 36 0.14434 3.36190 2.78998 3.26183 36 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 37 2.93468 3.56909 0.11922 3.47183 37 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 38 2.93468 3.56909 0.11922 3.47183 38 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 39 2.93468 3.56909 0.11922 3.47183 39 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 40 3.41194 0.13276 3.46229 2.81356 40 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 41 3.41194 0.13276 3.46229 2.81356 41 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 42 2.93468 3.56909 0.11922 3.47183 42 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 43 3.41194 0.13276 3.46229 2.81356 43 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 44 2.93468 3.56909 0.11922 3.47183 44 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00111 4.00111 1.46634 0.26236 1.09861 0.40547 45 0.14434 3.36190 2.78998 3.26183 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98264 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:01:32 2012 NSEQ 2 EFFN 2.000000 CKSUM 296474965 STATS LOCAL MSV -7.2604 0.72972 STATS LOCAL VITERBI -8.2681 0.72972 STATS LOCAL FORWARD -3.5433 0.72972 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.42271 1.70465 1.46723 1.05975 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.92825 2.28391 0.95698 2.13014 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:00:58 2012 NSEQ 2 EFFN 2.000000 CKSUM 2990168005 STATS LOCAL MSV -7.1646 0.72994 STATS LOCAL VITERBI -8.3625 0.72994 STATS LOCAL FORWARD -3.7526 0.72994 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.36617 1.47616 1.53354 1.20187 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.15554 1.00938 2.23102 0.88601 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.92825 2.28391 0.95698 2.13014 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fiftytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:00:49 2012 NSEQ 3 EFFN 3.000000 CKSUM 142863865 STATS LOCAL MSV -7.7925 0.72071 STATS LOCAL VITERBI -7.6709 0.72071 STATS LOCAL FORWARD -4.2236 0.72071 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47110 1.51619 1.44961 1.15164 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 0.15719 3.27118 2.73043 3.16274 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.97980 2.52563 3.03204 0.19727 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:56 2012 NSEQ 11 EFFN 3.536865 CKSUM 2650403741 STATS LOCAL MSV -7.3857 0.71932 STATS LOCAL VITERBI -7.7979 0.71932 STATS LOCAL FORWARD -4.0496 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.61642 1.36997 1.33622 1.25724 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 0.00000 * 1 2.99315 3.65447 0.11011 3.56617 1 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 2 3.50920 0.12149 3.55537 2.88407 2 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 3 2.99315 3.65447 0.11011 3.56617 3 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 4 3.50920 0.12149 3.55537 2.88407 4 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 5 3.50920 0.12149 3.55537 2.88407 5 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 6 3.50920 0.12149 3.55537 2.88407 6 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 7 0.22094 3.15089 2.22952 3.03991 7 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 8 3.15592 2.63789 3.20148 0.16820 8 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 9 3.15592 2.63789 3.20148 0.16820 9 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 10 0.13346 3.44645 2.84474 3.35445 10 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 11 2.99315 3.65447 0.11011 3.56617 11 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 12 3.15592 2.63789 3.20148 0.16820 12 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 13 0.13346 3.44645 2.84474 3.35445 13 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 14 3.15592 2.63789 3.20148 0.16820 14 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 15 3.15592 2.63789 3.20148 0.16820 15 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 16 3.50920 0.12149 3.55537 2.88407 16 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 17 3.15592 2.63789 3.20148 0.16820 17 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 18 0.13346 3.44645 2.84474 3.35445 18 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 19 2.99315 3.65447 0.11011 3.56617 19 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 20 2.90372 2.06730 2.95916 0.26554 20 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 21 2.99315 3.65447 0.11011 3.56617 21 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 22 2.99315 3.65447 0.11011 3.56617 22 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 23 2.99315 3.65447 0.11011 3.56617 23 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 24 3.50920 0.12149 3.55537 2.88407 24 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 25 0.13346 3.44645 2.84474 3.35445 25 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 26 3.15592 2.63789 3.20148 0.16820 26 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 27 2.99315 3.65447 0.11011 3.56617 27 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 28 3.50920 0.12149 3.55537 2.88407 28 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 29 3.50920 0.12149 3.55537 2.88407 29 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 30 3.15592 2.63789 3.20148 0.16820 30 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 31 1.25961 2.65175 0.57195 2.50977 31 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 32 3.15592 2.63789 3.20148 0.16820 32 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 33 3.15592 2.63789 3.20148 0.16820 33 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 34 3.50920 0.12149 3.55537 2.88407 34 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 35 2.99315 3.65447 0.11011 3.56617 35 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 36 0.13346 3.44645 2.84474 3.35445 36 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 37 2.99315 3.65447 0.11011 3.56617 37 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 38 3.50920 0.12149 3.55537 2.88407 38 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 39 2.99315 3.65447 0.11011 3.56617 39 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 40 3.15592 2.63789 3.20148 0.16820 40 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 41 3.50920 0.12149 3.55537 2.88407 41 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 42 0.13346 3.44645 2.84474 3.35445 42 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 43 3.15592 2.63789 3.20148 0.16820 43 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 44 2.17823 2.42417 2.71887 0.31162 44 - - 1.38629 1.38629 1.38629 1.38629 0.03548 4.04950 4.04950 1.46634 0.26236 1.09861 0.40547 45 0.13346 3.44645 2.84474 3.35445 45 - - 1.38629 1.38629 1.38629 1.38629 0.01790 4.03191 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_forty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:43 2012 NSEQ 11 EFFN 3.327393 CKSUM 695266694 STATS LOCAL MSV -8.0825 0.71933 STATS LOCAL VITERBI -7.7536 0.71933 STATS LOCAL FORWARD -4.0569 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81021 1.37900 1.19427 1.26719 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 0.00000 * 1 2.94858 3.58928 0.11699 3.49411 1 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 2 3.43485 0.13000 3.48423 2.83026 2 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 3 2.94858 3.58928 0.11699 3.49411 3 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 4 3.43485 0.13000 3.48423 2.83026 4 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 5 3.43485 0.13000 3.48423 2.83026 5 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 6 3.43485 0.13000 3.48423 2.83026 6 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 7 3.43485 0.13000 3.48423 2.83026 7 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 8 3.09013 2.59611 3.13823 0.17843 8 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 9 3.09013 2.59611 3.13823 0.17843 9 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 10 2.94858 3.58928 0.11699 3.49411 10 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 11 2.94858 3.58928 0.11699 3.49411 11 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 12 3.09013 2.59611 3.13823 0.17843 12 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 13 0.14170 3.38177 2.80290 3.28358 13 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 14 3.09013 2.59611 3.13823 0.17843 14 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 15 3.09013 2.59611 3.13823 0.17843 15 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 16 3.43485 0.13000 3.48423 2.83026 16 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 17 3.43485 0.13000 3.48423 2.83026 17 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 18 2.94858 3.58928 0.11699 3.49411 18 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 19 0.14170 3.38177 2.80290 3.28358 19 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 20 2.94858 3.58928 0.11699 3.49411 20 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 21 2.94858 3.58928 0.11699 3.49411 21 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 22 2.94858 3.58928 0.11699 3.49411 22 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 23 2.94858 3.58928 0.11699 3.49411 23 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 24 3.43485 0.13000 3.48423 2.83026 24 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 25 0.14170 3.38177 2.80290 3.28358 25 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 26 3.09013 2.59611 3.13823 0.17843 26 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 27 2.94858 3.58928 0.11699 3.49411 27 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 28 3.43485 0.13000 3.48423 2.83026 28 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 29 3.43485 0.13000 3.48423 2.83026 29 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 30 3.09013 2.59611 3.13823 0.17843 30 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 31 2.94858 3.58928 0.11699 3.49411 31 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 32 3.09013 2.59611 3.13823 0.17843 32 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 33 3.09013 2.59611 3.13823 0.17843 33 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 34 3.09013 2.59611 3.13823 0.17843 34 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 35 2.94858 3.58928 0.11699 3.49411 35 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 36 0.14170 3.38177 2.80290 3.28358 36 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 37 2.94858 3.58928 0.11699 3.49411 37 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 38 3.09013 2.59611 3.13823 0.17843 38 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 39 2.94858 3.58928 0.11699 3.49411 39 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 40 3.09013 2.59611 3.13823 0.17843 40 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 41 3.43485 0.13000 3.48423 2.83026 41 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 42 0.14170 3.38177 2.80290 3.28358 42 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 43 3.09013 2.59611 3.13823 0.17843 43 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 44 1.74282 2.26541 2.43923 0.45577 44 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 45 0.14170 3.38177 2.80290 3.28358 45 - - 1.38629 1.38629 1.38629 1.38629 0.01860 3.99404 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:54 2012 NSEQ 3 EFFN 3.000000 CKSUM 2333109231 STATS LOCAL MSV -8.0117 0.72056 STATS LOCAL VITERBI -7.6901 0.72056 STATS LOCAL FORWARD -4.1581 0.72056 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80981 1.37298 1.32209 1.15078 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.97980 2.52563 3.03204 0.19727 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyfivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:58:56 2012 NSEQ 4 EFFN 3.339844 CKSUM 628225450 STATS LOCAL MSV -8.0851 0.71931 STATS LOCAL VITERBI -7.7586 0.71931 STATS LOCAL FORWARD -4.0151 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93398 1.36716 1.19656 1.20943 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 0.00000 * 1 2.95135 3.59331 0.11655 3.49856 1 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 2 3.43942 0.12946 3.48861 2.83359 2 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 3 2.95135 3.59331 0.11655 3.49856 3 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 4 3.43942 0.12946 3.48861 2.83359 4 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 5 3.43942 0.12946 3.48861 2.83359 5 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 6 3.43942 0.12946 3.48861 2.83359 6 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 7 3.43942 0.12946 3.48861 2.83359 7 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 8 3.09414 2.59866 3.14209 0.17779 8 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 9 2.60190 1.56681 2.66737 0.43429 9 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 10 2.95135 3.59331 0.11655 3.49856 10 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 11 2.95135 3.59331 0.11655 3.49856 11 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 12 3.09414 2.59866 3.14209 0.17779 12 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 13 0.14117 3.38574 2.80548 3.28793 13 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 14 3.09414 2.59866 3.14209 0.17779 14 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 15 3.09414 2.59866 3.14209 0.17779 15 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 16 3.43942 0.12946 3.48861 2.83359 16 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 17 3.43942 0.12946 3.48861 2.83359 17 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 18 2.95135 3.59331 0.11655 3.49856 18 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 19 0.14117 3.38574 2.80548 3.28793 19 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 20 2.95135 3.59331 0.11655 3.49856 20 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 21 2.95135 3.59331 0.11655 3.49856 21 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 22 2.95135 3.59331 0.11655 3.49856 22 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 23 2.95135 3.59331 0.11655 3.49856 23 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 24 3.43942 0.12946 3.48861 2.83359 24 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 25 0.14117 3.38574 2.80548 3.28793 25 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 26 3.09414 2.59866 3.14209 0.17779 26 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 27 2.95135 3.59331 0.11655 3.49856 27 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 28 3.43942 0.12946 3.48861 2.83359 28 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 29 3.43942 0.12946 3.48861 2.83359 29 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 30 3.09414 2.59866 3.14209 0.17779 30 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 31 2.95135 3.59331 0.11655 3.49856 31 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 32 3.09414 2.59866 3.14209 0.17779 32 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 33 3.09414 2.59866 3.14209 0.17779 33 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 34 3.09414 2.59866 3.14209 0.17779 34 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 35 2.95135 3.59331 0.11655 3.49856 35 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 36 0.14117 3.38574 2.80548 3.28793 36 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 37 2.95135 3.59331 0.11655 3.49856 37 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 38 3.09414 2.59866 3.14209 0.17779 38 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 39 2.95135 3.59331 0.11655 3.49856 39 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 40 3.09414 2.59866 3.14209 0.17779 40 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 41 3.43942 0.12946 3.48861 2.83359 41 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 42 0.14117 3.38574 2.80548 3.28793 42 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 43 3.09414 2.59866 3.14209 0.17779 43 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 44 3.09414 2.59866 3.14209 0.17779 44 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01455 4.01455 1.46634 0.26236 1.09861 0.40547 45 3.09414 2.59866 3.14209 0.17779 45 - - 1.38629 1.38629 1.38629 1.38629 0.01855 3.99634 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyfiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 3206328775 STATS LOCAL MSV -7.4469 0.72804 STATS LOCAL VITERBI -8.2249 0.72804 STATS LOCAL FORWARD -3.6506 0.72804 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66019 1.45155 1.21279 1.27898 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyfivec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:14 2012 NSEQ 5 EFFN 3.442383 CKSUM 2359152773 STATS LOCAL MSV -7.4894 0.71932 STATS LOCAL VITERBI -7.8319 0.71932 STATS LOCAL FORWARD -3.8690 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.89797 1.25101 1.15079 1.39625 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 0.00000 * 1 2.97356 3.62574 0.11309 3.53438 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 2 3.47635 0.12517 3.52395 2.86037 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 3 2.97356 3.62574 0.11309 3.53438 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 4 3.47635 0.12517 3.52395 2.86037 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 5 3.12669 2.61934 3.17338 0.17266 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 6 3.47635 0.12517 3.52395 2.86037 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 7 3.47635 0.12517 3.52395 2.86037 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 8 3.12669 2.61934 3.17338 0.17266 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 9 3.47635 0.12517 3.52395 2.86037 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 10 2.97356 3.62574 0.11309 3.53438 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 11 2.97356 3.62574 0.11309 3.53438 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 12 3.12669 2.61934 3.17338 0.17266 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 13 0.13703 3.41783 2.82627 3.32308 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 14 3.12669 2.61934 3.17338 0.17266 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 15 3.12669 2.61934 3.17338 0.17266 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 16 3.47635 0.12517 3.52395 2.86037 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 17 3.47635 0.12517 3.52395 2.86037 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 18 2.97356 3.62574 0.11309 3.53438 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 19 0.13703 3.41783 2.82627 3.32308 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 20 2.97356 3.62574 0.11309 3.53438 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 21 2.97356 3.62574 0.11309 3.53438 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 22 0.13703 3.41783 2.82627 3.32308 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 23 2.97356 3.62574 0.11309 3.53438 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 24 3.47635 0.12517 3.52395 2.86037 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 25 0.13703 3.41783 2.82627 3.32308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 26 3.12669 2.61934 3.17338 0.17266 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 27 2.97356 3.62574 0.11309 3.53438 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 28 3.47635 0.12517 3.52395 2.86037 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 29 3.47635 0.12517 3.52395 2.86037 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 30 3.12669 2.61934 3.17338 0.17266 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 31 2.97356 3.62574 0.11309 3.53438 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 32 3.12669 2.61934 3.17338 0.17266 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 33 3.47635 0.12517 3.52395 2.86037 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 34 3.12669 2.61934 3.17338 0.17266 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 35 2.97356 3.62574 0.11309 3.53438 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 36 0.13703 3.41783 2.82627 3.32308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 37 2.97356 3.62574 0.11309 3.53438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 38 3.47635 0.12517 3.52395 2.86037 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 39 2.97356 3.62574 0.11309 3.53438 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 40 3.12669 2.61934 3.17338 0.17266 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 41 3.47635 0.12517 3.52395 2.86037 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 42 3.12669 2.61934 3.17338 0.17266 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 43 2.14202 2.15832 1.20639 0.75974 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 44 2.97356 3.62574 0.11309 3.53438 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 45 1.13214 2.58592 0.66292 2.44201 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01501 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyfived_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:20 2012 NSEQ 237 EFFN 4.343216 CKSUM 1406720538 STATS LOCAL MSV -7.1463 0.71933 STATS LOCAL VITERBI -7.6347 0.71933 STATS LOCAL FORWARD -4.1955 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82086 1.40125 1.21727 1.21811 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 0.00000 * 1 3.13300 3.86151 0.09111 3.79598 1 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 2 3.74895 0.09809 3.78408 3.05426 2 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 3 3.00887 3.81913 0.09960 3.75029 3 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 4 3.74895 0.09809 3.78408 3.05426 4 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 5 3.26041 2.45402 3.30291 0.17566 5 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 6 3.74895 0.09809 3.78408 3.05426 6 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 7 3.58538 0.12986 3.62786 2.69593 7 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 8 3.07910 2.55111 3.25758 0.17731 8 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 9 2.97155 1.84019 3.02700 0.29904 9 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 10 3.13300 3.86151 0.09111 3.79598 10 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 11 3.05937 3.69704 0.11322 3.34288 11 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 12 3.14091 2.64393 3.30396 0.16377 12 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 13 0.16429 3.45399 2.46122 3.36524 13 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 14 2.89131 2.31177 3.11591 0.22180 14 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 15 3.37835 2.77920 3.41516 0.13819 15 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 16 3.74895 0.09809 3.78408 3.05426 16 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 17 3.74895 0.09809 3.78408 3.05426 17 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 18 2.70375 3.69075 0.12665 3.60999 18 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 19 0.15792 3.40368 2.70862 3.07468 19 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 20 2.59264 3.46092 0.16187 3.14123 20 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 21 3.13300 3.86151 0.09111 3.79598 21 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 22 0.15669 3.26950 2.63689 3.34050 22 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 23 3.13300 3.86151 0.09111 3.79598 23 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 24 3.69541 0.10804 3.73291 2.92530 24 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 25 0.11007 3.65796 2.98073 3.58691 25 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 26 3.33869 2.66189 3.37735 0.15017 26 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 27 3.13300 3.86151 0.09111 3.79598 27 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 28 3.74895 0.09809 3.78408 3.05426 28 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 29 3.74895 0.09809 3.78408 3.05426 29 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 30 3.37835 2.77920 3.41516 0.13819 30 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 31 3.13300 3.86151 0.09111 3.79598 31 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 32 3.37835 2.77920 3.41516 0.13819 32 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 33 3.26363 2.46207 3.30597 0.17456 33 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 34 3.31871 2.60619 3.35834 0.15643 34 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 35 3.13300 3.86151 0.09111 3.79598 35 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 36 0.11007 3.65796 2.98073 3.58691 36 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 37 3.13300 3.86151 0.09111 3.79598 37 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 38 3.15847 2.21629 3.20584 0.21323 38 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 39 2.97835 3.80788 0.10189 3.73805 39 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 40 3.37835 2.77920 3.41516 0.13819 40 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 41 3.69022 0.10903 3.72796 2.91353 41 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 42 0.24784 2.84456 2.25029 2.88269 42 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 43 2.35553 2.22018 2.09188 0.39584 43 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 44 2.19479 1.49182 2.25461 0.58207 44 - - 1.38629 1.38629 1.38629 1.38629 0.03104 4.18101 4.18101 1.46634 0.26236 1.09861 0.40547 45 1.24696 2.09307 1.09101 1.37263 45 - - 1.38629 1.38629 1.38629 1.38629 0.01564 4.16561 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:58:34 2012 NSEQ 5 EFFN 3.706055 CKSUM 2367162579 STATS LOCAL MSV -7.0831 0.71933 STATS LOCAL VITERBI -7.6331 0.71933 STATS LOCAL FORWARD -4.0281 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.69348 1.53610 1.27583 1.13412 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 0.00000 * 1 3.56534 0.11549 3.60901 2.92432 1 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 2 3.02632 3.70335 0.10526 3.62032 2 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 3 3.56534 0.11549 3.60901 2.92432 3 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 4 3.20650 2.66995 3.25008 0.16079 4 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 5 3.56534 0.11549 3.60901 2.92432 5 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 6 3.20650 2.66995 3.25008 0.16079 6 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 7 2.49931 0.72471 2.57096 1.03020 7 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 8 3.20650 2.66995 3.25008 0.16079 8 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 9 0.12757 3.49551 2.87632 3.40830 9 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 10 3.02632 3.70335 0.10526 3.62032 10 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 11 3.20650 2.66995 3.25008 0.16079 11 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 12 2.51864 1.18254 2.58793 0.62035 12 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 13 0.12757 3.49551 2.87632 3.40830 13 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 14 3.20650 2.66995 3.25008 0.16079 14 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 15 3.20650 2.66995 3.25008 0.16079 15 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 16 3.56534 0.11549 3.60901 2.92432 16 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 17 3.20650 2.66995 3.25008 0.16079 17 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 18 3.02632 3.70335 0.10526 3.62032 18 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 19 1.12884 2.63120 0.65089 2.48870 19 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 20 0.12757 3.49551 2.87632 3.40830 20 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 21 3.02632 3.70335 0.10526 3.62032 21 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 22 0.12757 3.49551 2.87632 3.40830 22 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 23 3.02632 3.70335 0.10526 3.62032 23 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 24 3.56534 0.11549 3.60901 2.92432 24 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 25 0.12757 3.49551 2.87632 3.40830 25 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 26 3.20650 2.66995 3.25008 0.16079 26 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 27 3.02632 3.70335 0.10526 3.62032 27 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 28 3.56534 0.11549 3.60901 2.92432 28 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 29 3.20650 2.66995 3.25008 0.16079 29 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 30 3.20650 2.66995 3.25008 0.16079 30 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 31 3.02632 3.70335 0.10526 3.62032 31 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 32 3.20650 2.66995 3.25008 0.16079 32 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 33 3.20650 2.66995 3.25008 0.16079 33 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 34 3.20650 2.66995 3.25008 0.16079 34 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 35 3.02632 3.70335 0.10526 3.62032 35 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 36 0.12757 3.49551 2.87632 3.40830 36 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 37 3.02632 3.70335 0.10526 3.62032 37 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 38 3.20650 2.66995 3.25008 0.16079 38 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 39 3.02632 3.70335 0.10526 3.62032 39 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 40 3.20650 2.66995 3.25008 0.16079 40 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 41 3.56534 0.11549 3.60901 2.92432 41 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 42 3.02632 3.70335 0.10526 3.62032 42 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 43 3.56534 0.11549 3.60901 2.92432 43 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 44 3.02632 3.70335 0.10526 3.62032 44 - - 1.38629 1.38629 1.38629 1.38629 0.03445 4.07856 4.07856 1.46634 0.26236 1.09861 0.40547 45 0.12757 3.49551 2.87632 3.40830 45 - - 1.38629 1.38629 1.38629 1.38629 0.01737 4.06149 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:00:11 2012 NSEQ 2 EFFN 2.000000 CKSUM 3905070046 STATS LOCAL MSV -7.3577 0.72818 STATS LOCAL VITERBI -8.3397 0.72818 STATS LOCAL FORWARD -3.7433 0.72818 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45948 1.39088 1.37523 1.32425 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:51 2012 NSEQ 114 EFFN 3.816467 CKSUM 4093321362 STATS LOCAL MSV -7.3279 0.71933 STATS LOCAL VITERBI -7.6194 0.71933 STATS LOCAL FORWARD -4.0794 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.84227 1.42693 1.13304 1.27495 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 0.00000 * 1 3.04674 3.73356 0.10238 3.65383 1 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 2 3.60020 0.11193 3.64228 2.94916 2 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 3 2.86625 3.65924 0.11731 3.57469 3 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 4 3.60020 0.11193 3.64228 2.94916 4 - - 1.38629 1.38629 1.38629 1.38629 0.04199 4.09709 3.70919 1.46634 0.26236 1.09861 0.40547 5 2.85101 1.85702 2.90918 0.31258 5 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08918 4.08918 1.46634 0.26236 0.85738 0.55212 6 3.50961 0.12985 3.55506 2.76011 6 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 7 3.49787 0.13228 3.54377 2.73735 7 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 8 3.23832 2.69012 3.28066 0.15631 8 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 9 2.98382 2.09614 3.03694 0.25040 9 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 10 3.04674 3.73356 0.10238 3.65383 10 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 11 3.04674 3.73356 0.10238 3.65383 11 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 12 2.49295 1.97733 2.76597 0.33410 12 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 13 0.12406 3.52609 2.89596 3.44190 13 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 14 2.77946 2.61153 3.08419 0.19999 14 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 15 3.23832 2.69012 3.28066 0.15631 15 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 16 3.52346 0.12702 3.56837 2.78741 16 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 17 3.60020 0.11193 3.64228 2.94916 17 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 18 3.04674 3.73356 0.10238 3.65383 18 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 19 0.12406 3.52609 2.89596 3.44190 19 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 20 3.04674 3.73356 0.10238 3.65383 20 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 21 3.04674 3.73356 0.10238 3.65383 21 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 22 0.19858 3.26107 2.31025 3.15768 22 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 23 3.04674 3.73356 0.10238 3.65383 23 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 24 3.46008 0.14032 3.50742 2.66615 24 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 25 0.12406 3.52609 2.89596 3.44190 25 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 26 3.19075 2.56329 3.23500 0.17144 26 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 27 2.88953 3.66950 0.11520 3.58570 27 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 28 3.60020 0.11193 3.64228 2.94916 28 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 29 3.60020 0.11193 3.64228 2.94916 29 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 30 3.23832 2.69012 3.28066 0.15631 30 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 31 3.04674 3.73356 0.10238 3.65383 31 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 32 3.23832 2.69012 3.28066 0.15631 32 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 33 3.13026 2.41511 3.17713 0.19209 33 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 34 3.23832 2.69012 3.28066 0.15631 34 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 35 3.04674 3.73356 0.10238 3.65383 35 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 36 0.12406 3.52609 2.89596 3.44190 36 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 37 2.96364 3.55624 0.12756 3.22935 37 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 38 2.40425 2.32499 2.82843 0.28399 38 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 39 3.04674 3.73356 0.10238 3.65383 39 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 40 3.13575 2.42806 3.18238 0.19015 40 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 41 3.60020 0.11193 3.64228 2.94916 41 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 42 2.41976 3.42442 0.17150 3.32179 42 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 43 3.13398 2.42388 3.18069 0.19077 43 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 44 2.88166 3.40579 0.12806 3.47437 44 - - 1.38629 1.38629 1.38629 1.38629 0.03381 4.09709 4.09709 1.46634 0.26236 1.09861 0.40547 45 0.35392 2.58103 2.40647 2.02315 45 - - 1.38629 1.38629 1.38629 1.38629 0.01705 4.08033 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:40 2012 NSEQ 2 EFFN 2.000000 CKSUM 905611248 STATS LOCAL MSV -7.4613 0.72901 STATS LOCAL VITERBI -8.2183 0.72901 STATS LOCAL FORWARD -3.4166 0.72901 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65473 1.62821 1.37318 1.02367 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:59:31 2012 NSEQ 5 EFFN 3.432617 CKSUM 522699309 STATS LOCAL MSV -7.3872 0.71931 STATS LOCAL VITERBI -7.7485 0.71931 STATS LOCAL FORWARD -4.0809 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81895 1.59853 1.21075 1.08579 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 0.00000 * 1 2.97148 3.62270 0.11341 3.53103 1 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 2 3.47289 0.12556 3.52064 2.85787 2 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 3 0.13742 3.41482 2.82432 3.31978 3 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 4 3.47289 0.12556 3.52064 2.85787 4 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 5 3.12363 2.61740 3.17044 0.17313 5 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 6 3.12363 2.61740 3.17044 0.17313 6 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 7 2.97148 3.62270 0.11341 3.53103 7 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 8 2.97148 3.62270 0.11341 3.53103 8 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 9 3.12363 2.61740 3.17044 0.17313 9 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 10 2.97148 3.62270 0.11341 3.53103 10 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 11 2.97148 3.62270 0.11341 3.53103 11 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 12 3.12363 2.61740 3.17044 0.17313 12 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 13 0.13742 3.41482 2.82432 3.31978 13 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 14 3.12363 2.61740 3.17044 0.17313 14 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 15 3.12363 2.61740 3.17044 0.17313 15 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 16 3.47289 0.12556 3.52064 2.85787 16 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 17 3.47289 0.12556 3.52064 2.85787 17 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 18 2.97148 3.62270 0.11341 3.53103 18 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 19 3.47289 0.12556 3.52064 2.85787 19 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 20 3.47289 0.12556 3.52064 2.85787 20 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 21 0.13742 3.41482 2.82432 3.31978 21 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 22 0.13742 3.41482 2.82432 3.31978 22 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 23 2.97148 3.62270 0.11341 3.53103 23 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 24 3.12363 2.61740 3.17044 0.17313 24 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 25 0.13742 3.41482 2.82432 3.31978 25 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 26 3.12363 2.61740 3.17044 0.17313 26 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 27 2.97148 3.62270 0.11341 3.53103 27 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 28 3.47289 0.12556 3.52064 2.85787 28 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 29 3.12363 2.61740 3.17044 0.17313 29 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 30 3.12363 2.61740 3.17044 0.17313 30 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 31 2.97148 3.62270 0.11341 3.53103 31 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 32 3.12363 2.61740 3.17044 0.17313 32 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 33 3.12363 2.61740 3.17044 0.17313 33 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 34 3.12363 2.61740 3.17044 0.17313 34 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 35 2.97148 3.62270 0.11341 3.53103 35 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 36 0.13742 3.41482 2.82432 3.31978 36 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 37 2.97148 3.62270 0.11341 3.53103 37 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 38 3.12363 2.61740 3.17044 0.17313 38 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 39 2.97148 3.62270 0.11341 3.53103 39 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 40 3.12363 2.61740 3.17044 0.17313 40 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 41 3.47289 0.12556 3.52064 2.85787 41 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 42 3.12363 2.61740 3.17044 0.17313 42 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 43 2.35654 2.56629 0.41889 1.76812 43 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 44 3.12363 2.61740 3.17044 0.17313 44 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03116 4.03116 1.46634 0.26236 1.09861 0.40547 45 2.97148 3.62270 0.11341 3.53103 45 - - 1.38629 1.38629 1.38629 1.38629 0.01824 4.01325 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:58:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 528169609 STATS LOCAL MSV -7.5878 0.72793 STATS LOCAL VITERBI -8.4387 0.72793 STATS LOCAL FORWARD -3.3910 0.72793 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92254 1.12847 1.17052 1.51399 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.15554 1.00938 2.23102 0.88601 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fortytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:59 2012 NSEQ 4 EFFN 3.402344 CKSUM 3056681829 STATS LOCAL MSV -7.1674 0.71931 STATS LOCAL VITERBI -7.7681 0.71931 STATS LOCAL FORWARD -4.4347 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82368 1.50734 1.25418 1.10334 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 0.00000 * 1 3.11409 2.61134 3.16126 0.17462 1 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 2 2.96500 3.61323 0.11441 3.52056 2 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 3 3.46209 0.12680 3.51031 2.85005 3 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 4 3.11409 2.61134 3.16126 0.17462 4 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 5 3.46209 0.12680 3.51031 2.85005 5 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 6 3.46209 0.12680 3.51031 2.85005 6 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 7 3.11409 2.61134 3.16126 0.17462 7 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 8 3.11409 2.61134 3.16126 0.17462 8 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 9 2.96500 3.61323 0.11441 3.52056 9 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 10 2.96500 3.61323 0.11441 3.52056 10 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 11 2.96500 3.61323 0.11441 3.52056 11 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 12 3.11409 2.61134 3.16126 0.17462 12 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 13 2.61679 1.56804 2.68196 0.43066 13 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 14 0.13862 3.40543 2.81825 3.30949 14 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 15 3.46209 0.12680 3.51031 2.85005 15 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 16 3.46209 0.12680 3.51031 2.85005 16 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 17 3.11409 2.61134 3.16126 0.17462 17 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 18 0.13862 3.40543 2.81825 3.30949 18 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 19 3.11409 2.61134 3.16126 0.17462 19 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 20 2.96500 3.61323 0.11441 3.52056 20 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 21 2.96500 3.61323 0.11441 3.52056 21 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 22 0.13862 3.40543 2.81825 3.30949 22 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 23 2.96500 3.61323 0.11441 3.52056 23 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 24 3.46209 0.12680 3.51031 2.85005 24 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 25 0.13862 3.40543 2.81825 3.30949 25 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 26 3.11409 2.61134 3.16126 0.17462 26 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 27 2.96500 3.61323 0.11441 3.52056 27 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 28 3.46209 0.12680 3.51031 2.85005 28 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 29 3.46209 0.12680 3.51031 2.85005 29 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 30 3.11409 2.61134 3.16126 0.17462 30 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 31 2.96500 3.61323 0.11441 3.52056 31 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 32 3.11409 2.61134 3.16126 0.17462 32 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 33 3.11409 2.61134 3.16126 0.17462 33 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 34 3.11409 2.61134 3.16126 0.17462 34 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 35 2.96500 3.61323 0.11441 3.52056 35 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 36 0.13862 3.40543 2.81825 3.30949 36 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 37 2.96500 3.61323 0.11441 3.52056 37 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 38 3.11409 2.61134 3.16126 0.17462 38 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 39 2.96500 3.61323 0.11441 3.52056 39 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 40 3.11409 2.61134 3.16126 0.17462 40 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 41 3.46209 0.12680 3.51031 2.85005 41 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 42 0.13862 3.40543 2.81825 3.30949 42 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 43 3.11409 2.61134 3.16126 0.17462 43 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 44 2.96500 3.61323 0.11441 3.52056 44 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 45 3.11409 2.61134 3.16126 0.17462 45 - - 1.38629 1.38629 1.38629 1.38629 0.01834 4.00776 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:37 2012 NSEQ 401 EFFN 6.335991 CKSUM 1616265713 STATS LOCAL MSV -6.6662 0.71932 STATS LOCAL VITERBI -7.7272 0.71932 STATS LOCAL FORWARD -4.1740 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.85227 1.27715 1.25943 1.27128 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 0.00000 * 1 3.35863 4.18442 0.06799 4.15287 1 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 2 4.12655 0.07047 4.14418 3.32280 2 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 3 2.88761 4.06444 0.09525 4.01882 3 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 4 4.12655 0.07047 4.14418 3.32280 4 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 5 4.01577 0.09372 4.04050 2.92167 5 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 6 3.81002 0.13885 3.84658 2.45175 6 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 7 0.97552 1.85015 1.43386 1.48102 7 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 8 2.84789 1.28575 2.74126 0.50899 8 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 9 3.21019 1.55931 3.26306 0.34094 9 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 10 0.44754 3.13787 1.31527 3.01539 10 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 11 3.35863 4.18442 0.06799 4.15287 11 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 12 3.34079 1.79332 3.38771 0.26867 12 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 13 0.08022 4.00886 3.21676 3.97120 13 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 14 3.03263 2.27231 3.13698 0.21651 14 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 15 3.73510 2.86704 3.75942 0.10985 15 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 16 4.12655 0.07047 4.14418 3.32280 16 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 17 3.04926 1.28375 3.10866 0.46053 17 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 18 1.00485 2.87612 0.67686 2.66876 18 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 19 1.76285 2.70264 0.39893 2.40376 19 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 20 1.52951 1.43029 1.84828 0.95034 20 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 21 2.53311 3.95443 0.12666 3.89293 21 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 22 3.01957 4.11694 0.08565 4.07661 22 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 23 3.35863 4.18442 0.06799 4.15287 23 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 24 3.88673 0.11089 3.71524 2.81166 24 - - 1.38629 1.38629 1.38629 1.38629 0.02508 4.44688 4.33899 1.46634 0.26236 1.09861 0.40547 25 0.09132 3.66353 3.19121 3.88696 25 - - 1.38629 1.38629 1.38629 1.38629 0.02374 4.44554 4.44554 1.46634 0.26236 1.02800 0.44274 26 3.74065 2.89065 3.76462 0.10809 26 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 27 3.15299 4.14692 0.07789 4.11067 27 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 28 4.12655 0.07047 4.14418 3.32280 28 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 29 4.08773 0.07863 4.10785 3.16060 29 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 30 3.73164 2.85257 3.75619 0.11096 30 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 31 2.57812 3.97378 0.12179 3.91464 31 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 32 3.77374 3.04121 3.79557 0.09785 32 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 33 3.43589 1.98554 3.47803 0.22361 33 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 34 4.08928 0.07831 4.10931 3.16655 34 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 35 3.28921 3.62754 0.09103 3.76610 35 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 36 0.09824 3.89102 3.17571 3.46158 36 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 37 3.35863 4.18442 0.06799 4.15287 37 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 38 3.97412 0.09467 3.79725 3.01398 38 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 39 3.35863 4.18442 0.06799 4.15287 39 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 40 3.73533 2.86803 3.75964 0.10978 40 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 41 4.12655 0.07047 4.14418 3.32280 41 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 42 0.09241 3.96785 3.00350 3.92518 42 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 43 3.71035 2.76693 3.73629 0.11785 43 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 44 3.31793 2.54031 3.57427 0.15444 44 - - 1.38629 1.38629 1.38629 1.38629 0.02371 4.44688 4.44688 1.46634 0.26236 1.09861 0.40547 45 1.28162 2.43337 2.32598 0.62179 45 - - 1.38629 1.38629 1.38629 1.38629 0.01192 4.43509 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:46 2012 NSEQ 2 EFFN 2.000000 CKSUM 4155459657 STATS LOCAL MSV -7.6825 0.72815 STATS LOCAL VITERBI -8.4704 0.72815 STATS LOCAL FORWARD -3.4801 0.72815 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.88707 1.17400 1.16732 1.47773 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 1.01448 1.11006 1.95471 1.79419 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fourteena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:48:05 2012 NSEQ 5 EFFN 3.442383 CKSUM 1670456327 STATS LOCAL MSV -7.3397 0.71933 STATS LOCAL VITERBI -7.6574 0.71933 STATS LOCAL FORWARD -4.1134 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.69613 1.28590 1.21959 1.40709 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 0.00000 * 1 2.97356 3.62574 0.11309 3.53438 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 2 3.47635 0.12517 3.52395 2.86037 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 3 2.97356 3.62574 0.11309 3.53438 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 4 3.47635 0.12517 3.52395 2.86037 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 5 3.47635 0.12517 3.52395 2.86037 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 6 3.47635 0.12517 3.52395 2.86037 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 7 3.12669 2.61934 3.17338 0.17266 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 8 2.45295 0.73643 2.52520 1.03536 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 9 3.12669 2.61934 3.17338 0.17266 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 10 2.97356 3.62574 0.11309 3.53438 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 11 2.97356 3.62574 0.11309 3.53438 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 12 3.12669 2.61934 3.17338 0.17266 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 13 0.13703 3.41783 2.82627 3.32308 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 14 3.12669 2.61934 3.17338 0.17266 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 15 3.12669 2.61934 3.17338 0.17266 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 16 3.47635 0.12517 3.52395 2.86037 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 17 3.47635 0.12517 3.52395 2.86037 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 18 2.97356 3.62574 0.11309 3.53438 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 19 1.13214 2.58592 0.66292 2.44201 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 20 0.13703 3.41783 2.82627 3.32308 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 21 2.97356 3.62574 0.11309 3.53438 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 22 2.97356 3.62574 0.11309 3.53438 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 23 2.97356 3.62574 0.11309 3.53438 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 24 3.47635 0.12517 3.52395 2.86037 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 25 0.13703 3.41783 2.82627 3.32308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 26 3.12669 2.61934 3.17338 0.17266 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 27 2.97356 3.62574 0.11309 3.53438 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 28 3.47635 0.12517 3.52395 2.86037 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 29 3.47635 0.12517 3.52395 2.86037 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 30 3.12669 2.61934 3.17338 0.17266 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 31 2.97356 3.62574 0.11309 3.53438 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 32 3.12669 2.61934 3.17338 0.17266 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 33 3.47635 0.12517 3.52395 2.86037 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 34 3.12669 2.61934 3.17338 0.17266 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 35 2.97356 3.62574 0.11309 3.53438 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 36 0.13703 3.41783 2.82627 3.32308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 37 2.97356 3.62574 0.11309 3.53438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 38 3.47635 0.12517 3.52395 2.86037 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 39 2.97356 3.62574 0.11309 3.53438 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 40 3.12669 2.61934 3.17338 0.17266 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 41 3.47635 0.12517 3.52395 2.86037 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 42 0.13703 3.41783 2.82627 3.32308 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 43 0.13703 3.41783 2.82627 3.32308 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 44 3.12669 2.61934 3.17338 0.17266 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 45 0.13703 3.41783 2.82627 3.32308 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01501 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_fourteenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:48:13 2012 NSEQ 136 EFFN 6.661377 CKSUM 3498924441 STATS LOCAL MSV -6.8627 0.71932 STATS LOCAL VITERBI -7.6122 0.71932 STATS LOCAL FORWARD -4.1891 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.88747 1.31457 1.23606 1.23984 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 0.00000 * 1 3.38680 4.22210 0.06568 4.19392 1 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 2 4.17003 0.06782 4.18585 3.35501 2 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 3 2.25794 3.86541 0.16026 3.79165 3 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 4 4.17003 0.06782 4.18585 3.35501 4 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 5 3.89517 0.12843 3.92817 2.51941 5 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 6 3.15443 0.40495 3.21632 1.38540 6 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 7 2.56668 1.30992 2.57154 0.55000 7 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 8 2.03249 1.12973 1.94624 0.90867 8 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 9 3.17124 1.99262 2.81252 0.27226 9 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 10 2.80398 4.09874 0.09929 4.05359 10 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 11 3.38680 4.22210 0.06568 4.19392 11 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 12 3.67603 2.47625 3.70587 0.14382 12 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 13 0.07718 4.05139 3.24746 4.01727 13 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 14 3.78219 2.87688 3.80507 0.10685 14 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 15 3.82368 3.07628 3.84379 0.09364 15 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 16 4.17003 0.06782 4.18585 3.35501 16 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 17 3.99951 0.10506 4.02641 2.75568 17 - - 1.38629 1.38629 1.38629 1.38629 0.02873 4.48429 4.07231 1.46634 0.26236 1.09861 0.40547 18 0.66154 2.67714 1.05690 2.69334 18 - - 1.38629 1.38629 1.38629 1.38629 0.02296 4.47852 4.47852 1.46634 0.26236 0.84358 0.56241 19 1.81129 2.07222 0.53899 2.06108 19 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 20 0.74476 2.47584 1.05075 2.39270 20 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 21 1.61301 3.40920 0.31383 3.29679 21 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 22 2.57911 4.02068 0.11963 3.96518 22 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 23 3.38680 4.22210 0.06568 4.19392 23 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 24 3.69828 0.17693 3.74126 2.17443 24 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 25 0.07718 4.05139 3.24746 4.01727 25 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 26 3.47691 1.95472 3.51832 0.22584 26 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 27 2.33371 3.90720 0.14916 3.83805 27 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 28 4.17003 0.06782 4.18585 3.35501 28 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 29 4.05797 0.09229 4.08120 2.91898 29 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 30 3.82368 3.07628 3.84379 0.09364 30 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 31 3.38680 4.22210 0.06568 4.19392 31 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 32 3.82368 3.07628 3.84379 0.09364 32 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 33 3.69533 2.54030 3.72394 0.13676 33 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 34 3.27474 1.57116 3.32598 0.33068 34 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 35 3.38680 4.22210 0.06568 4.19392 35 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 36 0.07718 4.05139 3.24746 4.01727 36 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 37 3.38680 4.22210 0.06568 4.19392 37 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 38 3.56830 0.08643 4.04779 3.29307 38 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 39 3.38680 4.22210 0.06568 4.19392 39 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 40 3.47691 1.95472 3.51832 0.22584 40 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 41 4.06558 0.08095 3.72281 3.31199 41 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 42 0.09467 3.99534 2.94229 3.95393 42 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 43 3.63489 3.01641 3.15558 0.12554 43 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 44 3.31282 2.73159 3.65261 0.13634 44 - - 1.38629 1.38629 1.38629 1.38629 0.02283 4.48429 4.48429 1.46634 0.26236 1.09861 0.40547 45 1.57980 2.38712 2.18055 0.52914 45 - - 1.38629 1.38629 1.38629 1.38629 0.01148 4.47294 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:46:38 2012 NSEQ 12 EFFN 3.495117 CKSUM 2912909677 STATS LOCAL MSV -7.2906 0.71932 STATS LOCAL VITERBI -7.8807 0.71932 STATS LOCAL FORWARD -3.9592 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.94391 1.18493 1.17611 1.41628 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 0.00000 * 1 2.98459 3.64191 0.11140 3.55227 1 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 2 3.49482 0.12308 3.54162 2.87371 2 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 3 2.98459 3.64191 0.11140 3.55227 3 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 4 3.49482 0.12308 3.54162 2.87371 4 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 5 3.49482 0.12308 3.54162 2.87371 5 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 6 3.49482 0.12308 3.54162 2.87371 6 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 7 2.98459 3.64191 0.11140 3.55227 7 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 8 3.49482 0.12308 3.54162 2.87371 8 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 9 3.14310 2.62975 3.18915 0.17014 9 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 10 2.98459 3.64191 0.11140 3.55227 10 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 11 2.98459 3.64191 0.11140 3.55227 11 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 12 0.82494 2.19657 2.18333 1.08504 12 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 13 0.13501 3.43391 2.83666 3.34071 13 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 14 3.14310 2.62975 3.18915 0.17014 14 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 15 3.14310 2.62975 3.18915 0.17014 15 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 16 3.49482 0.12308 3.54162 2.87371 16 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 17 3.49482 0.12308 3.54162 2.87371 17 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 18 0.66288 2.57492 1.13742 2.43235 18 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 19 2.98459 3.64191 0.11140 3.55227 19 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 20 3.49482 0.12308 3.54162 2.87371 20 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 21 2.98459 3.64191 0.11140 3.55227 21 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 22 2.98459 3.64191 0.11140 3.55227 22 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 23 2.98459 3.64191 0.11140 3.55227 23 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 24 3.49482 0.12308 3.54162 2.87371 24 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 25 0.13501 3.43391 2.83666 3.34071 25 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 26 3.14310 2.62975 3.18915 0.17014 26 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 27 2.98459 3.64191 0.11140 3.55227 27 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 28 3.49482 0.12308 3.54162 2.87371 28 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 29 3.49482 0.12308 3.54162 2.87371 29 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 30 2.76573 1.81685 2.82615 0.33506 30 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 31 2.98459 3.64191 0.11140 3.55227 31 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 32 3.14310 2.62975 3.18915 0.17014 32 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 33 3.14310 2.62975 3.18915 0.17014 33 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 34 3.49482 0.12308 3.54162 2.87371 34 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 35 2.98459 3.64191 0.11140 3.55227 35 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 36 0.13501 3.43391 2.83666 3.34071 36 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 37 2.98459 3.64191 0.11140 3.55227 37 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 38 3.49482 0.12308 3.54162 2.87371 38 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 39 2.98459 3.64191 0.11140 3.55227 39 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 40 3.14310 2.62975 3.18915 0.17014 40 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 41 3.49482 0.12308 3.54162 2.87371 41 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 42 0.13501 3.43391 2.83666 3.34071 42 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 43 3.14310 2.62975 3.18915 0.17014 43 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 44 3.14310 2.62975 3.18915 0.17014 44 - - 1.38629 1.38629 1.38629 1.38629 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547 45 3.14310 2.62975 3.18915 0.17014 45 - - 1.38629 1.38629 1.38629 1.38629 0.01803 4.02448 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:22 2012 NSEQ 4 EFFN 3.316406 CKSUM 1909354714 STATS LOCAL MSV -8.1253 0.71932 STATS LOCAL VITERBI -7.6550 0.71932 STATS LOCAL FORWARD -4.2395 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.91627 1.25412 1.19820 1.32508 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 0.00000 * 1 3.08658 2.59385 3.13481 0.17900 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 2 3.08658 2.59385 3.13481 0.17900 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 3 2.94613 3.58571 0.11738 3.49017 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 4 3.43079 0.13048 3.48035 2.82731 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 5 2.94613 3.58571 0.11738 3.49017 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 6 3.43079 0.13048 3.48035 2.82731 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 7 3.43079 0.13048 3.48035 2.82731 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 8 3.08658 2.59385 3.13481 0.17900 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 9 3.43079 0.13048 3.48035 2.82731 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 10 3.43079 0.13048 3.48035 2.82731 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 11 2.94613 3.58571 0.11738 3.49017 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 12 2.94613 3.58571 0.11738 3.49017 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 13 3.08658 2.59385 3.13481 0.17900 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 14 0.14216 3.37825 2.80062 3.27973 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 15 2.94613 3.58571 0.11738 3.49017 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 16 3.43079 0.13048 3.48035 2.82731 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 17 3.08658 2.59385 3.13481 0.17900 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 18 3.43079 0.13048 3.48035 2.82731 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 19 2.94613 3.58571 0.11738 3.49017 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 20 2.94613 3.58571 0.11738 3.49017 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 21 0.14216 3.37825 2.80062 3.27973 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 22 2.94613 3.58571 0.11738 3.49017 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 23 2.94613 3.58571 0.11738 3.49017 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 24 3.43079 0.13048 3.48035 2.82731 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 25 0.14216 3.37825 2.80062 3.27973 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 26 3.08658 2.59385 3.13481 0.17900 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 27 2.94613 3.58571 0.11738 3.49017 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 28 3.43079 0.13048 3.48035 2.82731 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 29 3.43079 0.13048 3.48035 2.82731 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 30 3.08658 2.59385 3.13481 0.17900 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 31 2.94613 3.58571 0.11738 3.49017 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 32 3.08658 2.59385 3.13481 0.17900 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 33 3.43079 0.13048 3.48035 2.82731 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 34 3.08658 2.59385 3.13481 0.17900 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 35 2.94613 3.58571 0.11738 3.49017 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 36 0.14216 3.37825 2.80062 3.27973 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 37 2.94613 3.58571 0.11738 3.49017 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 38 3.43079 0.13048 3.48035 2.82731 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 39 2.94613 3.58571 0.11738 3.49017 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 40 3.08658 2.59385 3.13481 0.17900 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 41 3.43079 0.13048 3.48035 2.82731 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 42 0.14216 3.37825 2.80062 3.27973 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 43 3.08658 2.59385 3.13481 0.17900 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 44 3.08658 2.59385 3.13481 0.17900 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01031 4.01031 1.46634 0.26236 1.09861 0.40547 45 1.52558 2.20399 2.32694 0.55417 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99202 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_onea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:43:52 2012 NSEQ 2 EFFN 2.000000 CKSUM 4063162399 STATS LOCAL MSV -7.4155 0.72875 STATS LOCAL VITERBI -8.2840 0.72875 STATS LOCAL FORWARD -3.5006 0.72875 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.70272 1.26741 1.19420 1.45540 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.92825 2.28391 0.95698 2.13014 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.15554 1.00938 2.23102 0.88601 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_oneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:00 2012 NSEQ 4 EFFN 3.167969 CKSUM 3370876521 STATS LOCAL MSV -8.1196 0.71932 STATS LOCAL VITERBI -7.8523 0.71932 STATS LOCAL FORWARD -3.8556 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93279 1.20454 1.14657 1.43674 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 * 1 2.91173 3.53592 0.12299 3.43528 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 2 3.37444 0.13743 3.42635 2.78609 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 3 2.91173 3.53592 0.12299 3.43528 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 4 3.37444 0.13743 3.42635 2.78609 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 5 3.37444 0.13743 3.42635 2.78609 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 6 3.37444 0.13743 3.42635 2.78609 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 7 3.37444 0.13743 3.42635 2.78609 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 8 3.03758 2.56263 3.08768 0.18713 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 9 3.03758 2.56263 3.08768 0.18713 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 10 2.91173 3.53592 0.12299 3.43528 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 11 2.91173 3.53592 0.12299 3.43528 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 12 3.03758 2.56263 3.08768 0.18713 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 13 0.14880 3.32943 2.76878 3.22633 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 14 3.03758 2.56263 3.08768 0.18713 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 15 3.03758 2.56263 3.08768 0.18713 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 16 3.37444 0.13743 3.42635 2.78609 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 17 3.37444 0.13743 3.42635 2.78609 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 18 2.91173 3.53592 0.12299 3.43528 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 19 0.14880 3.32943 2.76878 3.22633 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 20 2.91173 3.53592 0.12299 3.43528 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 21 2.91173 3.53592 0.12299 3.43528 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 22 2.91173 3.53592 0.12299 3.43528 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 23 2.91173 3.53592 0.12299 3.43528 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 24 3.37444 0.13743 3.42635 2.78609 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 25 0.14880 3.32943 2.76878 3.22633 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 26 3.03758 2.56263 3.08768 0.18713 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 27 2.91173 3.53592 0.12299 3.43528 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 28 3.37444 0.13743 3.42635 2.78609 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 29 3.37444 0.13743 3.42635 2.78609 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 30 3.03758 2.56263 3.08768 0.18713 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 31 2.91173 3.53592 0.12299 3.43528 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 32 3.03758 2.56263 3.08768 0.18713 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 33 3.03758 2.56263 3.08768 0.18713 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 34 3.37444 0.13743 3.42635 2.78609 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 35 2.91173 3.53592 0.12299 3.43528 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 36 0.14880 3.32943 2.76878 3.22633 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 37 2.91173 3.53592 0.12299 3.43528 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 38 3.37444 0.13743 3.42635 2.78609 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 39 2.91173 3.53592 0.12299 3.43528 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 40 3.03758 2.56263 3.08768 0.18713 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 41 3.37444 0.13743 3.42635 2.78609 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 42 2.91173 3.53592 0.12299 3.43528 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 43 3.03758 2.56263 3.08768 0.18713 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 44 3.37444 0.13743 3.42635 2.78609 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 45 0.14880 3.32943 2.76878 3.22633 45 - - 1.38629 1.38629 1.38629 1.38629 0.01917 3.96423 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_onec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:06 2012 NSEQ 2 EFFN 2.000000 CKSUM 3677974914 STATS LOCAL MSV -7.5987 0.72786 STATS LOCAL VITERBI -8.3454 0.72786 STATS LOCAL FORWARD -3.2444 0.72786 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82499 1.22407 1.12070 1.52006 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.15554 1.00938 2.23102 0.88601 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_oned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:13 2012 NSEQ 7 EFFN 3.284668 CKSUM 4274358060 STATS LOCAL MSV -8.0943 0.71931 STATS LOCAL VITERBI -7.9636 0.71931 STATS LOCAL FORWARD -3.6962 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.18504 1.06747 1.09179 1.57006 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 0.00000 * 1 2.93897 3.57531 0.11853 3.47870 1 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 2 3.41899 0.13190 3.46904 2.81871 2 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 3 2.93897 3.57531 0.11853 3.47870 3 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 4 3.41899 0.13190 3.46904 2.81871 4 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 5 3.41899 0.13190 3.46904 2.81871 5 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 6 3.41899 0.13190 3.46904 2.81871 6 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 7 3.41899 0.13190 3.46904 2.81871 7 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 8 3.41899 0.13190 3.46904 2.81871 8 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 9 3.07626 2.58729 3.12489 0.18068 9 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 10 2.93897 3.57531 0.11853 3.47870 10 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 11 2.93897 3.57531 0.11853 3.47870 11 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 12 3.41899 0.13190 3.46904 2.81871 12 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 13 0.14352 3.36802 2.79396 3.26852 13 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 14 3.07626 2.58729 3.12489 0.18068 14 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 15 3.07626 2.58729 3.12489 0.18068 15 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 16 3.41899 0.13190 3.46904 2.81871 16 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 17 3.41899 0.13190 3.46904 2.81871 17 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 18 2.08216 3.08691 0.25099 2.96289 18 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 19 2.93897 3.57531 0.11853 3.47870 19 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 20 2.93897 3.57531 0.11853 3.47870 20 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 21 2.93897 3.57531 0.11853 3.47870 21 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 22 2.93897 3.57531 0.11853 3.47870 22 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 23 2.93897 3.57531 0.11853 3.47870 23 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 24 3.41899 0.13190 3.46904 2.81871 24 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 25 0.14352 3.36802 2.79396 3.26852 25 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 26 3.07626 2.58729 3.12489 0.18068 26 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 27 2.93897 3.57531 0.11853 3.47870 27 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 28 3.41899 0.13190 3.46904 2.81871 28 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 29 3.41899 0.13190 3.46904 2.81871 29 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 30 3.07626 2.58729 3.12489 0.18068 30 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 31 2.93897 3.57531 0.11853 3.47870 31 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 32 3.07626 2.58729 3.12489 0.18068 32 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 33 3.07626 2.58729 3.12489 0.18068 33 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 34 3.41899 0.13190 3.46904 2.81871 34 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 35 2.93897 3.57531 0.11853 3.47870 35 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 36 0.14352 3.36802 2.79396 3.26852 36 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 37 2.93897 3.57531 0.11853 3.47870 37 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 38 3.41899 0.13190 3.46904 2.81871 38 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 39 2.93897 3.57531 0.11853 3.47870 39 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 40 3.07626 2.58729 3.12489 0.18068 40 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 41 2.20805 0.61730 1.50175 2.05614 41 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 42 3.07626 2.58729 3.12489 0.18068 42 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 43 3.41899 0.13190 3.46904 2.81871 43 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 44 3.41899 0.13190 3.46904 2.81871 44 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00454 4.00454 1.46634 0.26236 1.09861 0.40547 45 2.93897 3.57531 0.11853 3.47870 45 - - 1.38629 1.38629 1.38629 1.38629 0.01875 3.98614 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_onee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:23 2012 NSEQ 2 EFFN 2.000000 CKSUM 1794853889 STATS LOCAL MSV -7.6406 0.72821 STATS LOCAL VITERBI -8.3627 0.72821 STATS LOCAL FORWARD -3.2752 0.72821 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.78798 1.17856 1.10257 1.64524 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.15554 1.00938 2.23102 0.88601 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.92825 2.28391 0.95698 2.13014 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_onef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:30 2012 NSEQ 3 EFFN 3.000000 CKSUM 871522140 STATS LOCAL MSV -7.9021 0.72092 STATS LOCAL VITERBI -7.9162 0.72092 STATS LOCAL FORWARD -3.9268 0.72092 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.69363 1.37423 1.34081 1.19905 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 1.34853 2.58976 0.54705 2.44542 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 3.30705 0.14631 3.36166 2.73626 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_oneg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:44:36 2012 NSEQ 1561 EFFN 6.684198 CKSUM 3418821788 STATS LOCAL MSV -6.8053 0.71932 STATS LOCAL VITERBI -7.7544 0.71932 STATS LOCAL FORWARD -4.0381 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.97205 1.21424 1.17150 1.37045 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 0.00000 * 1 3.38872 4.22464 0.06553 4.19668 1 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 2 4.17295 0.06764 4.18865 3.35719 2 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 3 2.89526 3.68676 0.10461 3.96380 3 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 4 4.17295 0.06764 4.18865 3.35719 4 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 5 3.85825 0.08969 4.06504 3.04656 5 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 6 3.36357 0.20071 3.57790 2.12607 6 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 7 2.66581 0.74063 2.69178 0.95222 7 - - 1.38629 1.38629 1.38629 1.38629 0.02306 4.48686 4.46190 1.46634 0.26236 1.09861 0.40547 8 2.28437 1.01909 2.24032 0.84208 8 - - 1.38629 1.38629 1.38629 1.38629 0.02302 4.48658 4.46598 1.46634 0.26236 1.08204 0.41386 9 2.97925 1.83733 2.84485 0.31227 9 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48663 4.48663 1.46634 0.26236 1.08493 0.41238 10 3.03887 3.92884 0.08838 4.07273 10 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 11 3.38872 4.22464 0.06553 4.19668 11 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 12 2.98855 1.89219 3.15990 0.27909 12 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 13 0.09188 4.00662 2.98284 3.96657 13 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 14 3.49000 2.67023 3.53001 0.13816 14 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 15 3.50719 2.75819 3.71821 0.12518 15 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 16 4.10315 0.07635 3.85632 3.32876 16 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 17 4.05120 0.09430 4.07494 2.88963 17 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 18 2.18701 2.95611 0.29521 2.39306 18 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 19 1.42864 2.08368 0.85039 1.56711 19 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 20 1.57113 2.81477 0.41755 2.60891 20 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 21 2.33950 3.91375 0.14818 3.84520 21 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 22 3.07612 3.94759 0.08936 3.90985 22 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 23 3.24064 4.20152 0.07209 4.17061 23 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 24 3.91745 0.11158 3.71715 2.79057 24 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 25 0.08944 3.98919 3.12678 3.76436 25 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 26 3.67416 2.45932 3.70423 0.14558 26 - - 1.38629 1.38629 1.38629 1.38629 0.02320 4.48686 4.45044 1.46634 0.26236 1.09861 0.40547 27 2.74732 4.08357 0.10382 4.03621 27 - - 1.38629 1.38629 1.38629 1.38629 0.02278 4.48644 4.48644 1.46634 0.26236 1.07448 0.41775 28 4.03214 0.09171 3.87842 3.01168 28 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 29 4.13245 0.07658 4.15085 3.17186 29 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 30 3.70007 2.76771 3.55871 0.12330 30 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 31 3.20711 4.15474 0.07885 3.92905 31 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 32 3.76183 2.77666 3.78620 0.11448 32 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 33 3.45457 1.89935 3.49725 0.23768 33 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 34 4.03057 0.09881 4.05562 2.83032 34 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 35 3.21941 4.19413 0.07359 4.14267 35 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 36 0.07697 4.05426 3.24956 4.02037 36 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 37 3.23927 4.20128 0.07216 4.17034 37 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 38 3.54766 0.09882 3.98351 3.06432 38 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 39 3.25398 3.76065 0.08620 3.87757 39 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 40 3.51808 2.77215 3.72403 0.12366 40 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 41 4.12740 0.07768 4.14614 3.15136 41 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 42 0.12508 3.63349 2.86702 3.37326 42 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 43 2.85545 2.30195 2.67557 0.25678 43 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 44 2.26787 2.17381 2.46789 0.35959 44 - - 1.38629 1.38629 1.38629 1.38629 0.02277 4.48686 4.48686 1.46634 0.26236 1.09861 0.40547 45 0.95398 2.27139 1.55190 1.20470 45 - - 1.38629 1.38629 1.38629 1.38629 0.01145 4.47554 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:46:16 2012 NSEQ 246 EFFN 3.629791 CKSUM 3456989883 STATS LOCAL MSV -7.3471 0.71931 STATS LOCAL VITERBI -7.8229 0.71931 STATS LOCAL FORWARD -4.0682 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.94630 1.16064 1.18801 1.43093 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 0.00000 * 1 3.01166 3.68172 0.10738 3.59634 1 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 2 3.54046 0.11810 3.58524 2.90651 2 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 3 3.01166 3.68172 0.10738 3.59634 3 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 4 3.54046 0.11810 3.58524 2.90651 4 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 5 3.54046 0.11810 3.58524 2.90651 5 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 6 3.54046 0.11810 3.58524 2.90651 6 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 7 3.01166 3.68172 0.10738 3.59634 7 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 8 3.45729 0.13499 3.50490 2.73790 8 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 9 3.17518 0.20565 3.23237 2.25734 9 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 10 0.17094 3.32124 2.51132 3.22234 10 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 11 3.01166 3.68172 0.10738 3.59634 11 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 12 2.53869 1.28344 2.60705 0.56178 12 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 13 0.14070 3.43181 2.75675 3.34041 13 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 14 2.67631 1.58398 2.74020 0.41329 14 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 15 3.12781 2.51145 3.17441 0.18246 15 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 16 3.54046 0.11810 3.58524 2.90651 16 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 17 3.04838 2.32596 3.09826 0.21103 17 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 18 3.01166 3.68172 0.10738 3.59634 18 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 19 3.01166 3.68172 0.10738 3.59634 19 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 20 3.54046 0.11810 3.58524 2.90651 20 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 21 3.01166 3.68172 0.10738 3.59634 21 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 22 3.01166 3.68172 0.10738 3.59634 22 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 23 3.01166 3.68172 0.10738 3.59634 23 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 24 3.48300 0.12963 3.52971 2.78795 24 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 25 0.13015 3.47373 2.86232 3.38439 25 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 26 3.18398 2.65567 3.22844 0.16404 26 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 27 3.01166 3.68172 0.10738 3.59634 27 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 28 3.54046 0.11810 3.58524 2.90651 28 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 29 3.54046 0.11810 3.58524 2.90651 29 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 30 3.18398 2.65567 3.22844 0.16404 30 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 31 3.01166 3.68172 0.10738 3.59634 31 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 32 3.11701 2.48512 3.16405 0.18616 32 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 33 2.52911 1.25786 2.59778 0.57702 33 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 34 3.42784 0.14130 3.47650 2.68241 34 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 35 3.01166 3.68172 0.10738 3.59634 35 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 36 0.13015 3.47373 2.86232 3.38439 36 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 37 3.01166 3.68172 0.10738 3.59634 37 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 38 3.54046 0.11810 3.58524 2.90651 38 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 39 3.01166 3.68172 0.10738 3.59634 39 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 40 3.18398 2.65567 3.22844 0.16404 40 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 41 3.54046 0.11810 3.58524 2.90651 41 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 42 0.14087 3.43115 2.75517 3.33971 42 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 43 3.18398 2.65567 3.22844 0.16404 43 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 44 3.12582 2.50656 3.17250 0.18314 44 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06557 4.06557 1.46634 0.26236 1.09861 0.40547 45 3.14435 2.55255 3.19029 0.17690 45 - - 1.38629 1.38629 1.38629 1.38629 0.01761 4.04826 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:00 2012 NSEQ 5 EFFN 3.354492 CKSUM 4109630378 STATS LOCAL MSV -8.1285 0.71931 STATS LOCAL VITERBI -7.7585 0.71931 STATS LOCAL FORWARD -4.1769 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63493 1.51780 1.38270 1.09380 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 0.00000 * 1 2.95458 3.59803 0.11604 3.50376 1 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 2 3.44478 0.12882 3.49374 2.83749 2 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 3 0.14056 3.39039 2.80850 3.29302 3 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 4 3.44478 0.12882 3.49374 2.83749 4 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 5 3.09885 2.60165 3.14661 0.17704 5 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 6 3.09885 2.60165 3.14661 0.17704 6 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 7 3.09885 2.60165 3.14661 0.17704 7 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 8 2.95458 3.59803 0.11604 3.50376 8 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 9 2.95458 3.59803 0.11604 3.50376 9 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 10 2.95458 3.59803 0.11604 3.50376 10 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 11 2.95458 3.59803 0.11604 3.50376 11 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 12 3.09885 2.60165 3.14661 0.17704 12 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 13 0.14056 3.39039 2.80850 3.29302 13 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 14 3.09885 2.60165 3.14661 0.17704 14 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 15 3.44478 0.12882 3.49374 2.83749 15 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 16 3.44478 0.12882 3.49374 2.83749 16 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 17 3.44478 0.12882 3.49374 2.83749 17 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 18 3.44478 0.12882 3.49374 2.83749 18 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 19 3.44478 0.12882 3.49374 2.83749 19 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 20 0.14056 3.39039 2.80850 3.29302 20 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 21 0.14056 3.39039 2.80850 3.29302 21 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 22 0.14056 3.39039 2.80850 3.29302 22 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 23 2.95458 3.59803 0.11604 3.50376 23 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 24 3.09885 2.60165 3.14661 0.17704 24 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 25 0.14056 3.39039 2.80850 3.29302 25 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 26 3.09885 2.60165 3.14661 0.17704 26 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 27 0.14056 3.39039 2.80850 3.29302 27 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 28 3.44478 0.12882 3.49374 2.83749 28 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 29 3.09885 2.60165 3.14661 0.17704 29 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 30 3.09885 2.60165 3.14661 0.17704 30 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 31 2.95458 3.59803 0.11604 3.50376 31 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 32 3.09885 2.60165 3.14661 0.17704 32 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 33 3.09885 2.60165 3.14661 0.17704 33 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 34 3.09885 2.60165 3.14661 0.17704 34 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 35 2.95458 3.59803 0.11604 3.50376 35 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 36 0.14056 3.39039 2.80850 3.29302 36 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 37 2.95458 3.59803 0.11604 3.50376 37 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 38 3.44478 0.12882 3.49374 2.83749 38 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 39 2.95458 3.59803 0.11604 3.50376 39 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 40 3.09885 2.60165 3.14661 0.17704 40 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 41 3.09885 2.60165 3.14661 0.17704 41 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 42 2.95458 3.59803 0.11604 3.50376 42 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 43 3.09885 2.60165 3.14661 0.17704 43 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 44 3.09885 2.60165 3.14661 0.17704 44 - - 1.38629 1.38629 1.38629 1.38629 0.03667 4.01719 4.01719 1.46634 0.26236 1.09861 0.40547 45 3.09885 2.60165 3.14661 0.17704 45 - - 1.38629 1.38629 1.38629 1.38629 0.01850 3.99902 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:27 2012 NSEQ 2 EFFN 2.000000 CKSUM 3825338534 STATS LOCAL MSV -7.6685 0.72872 STATS LOCAL VITERBI -8.3299 0.72872 STATS LOCAL FORWARD -3.4225 0.72872 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66125 1.37506 1.44213 1.13678 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:44 2012 NSEQ 2 EFFN 2.000000 CKSUM 2006638932 STATS LOCAL MSV -7.3995 0.72872 STATS LOCAL VITERBI -8.2859 0.72872 STATS LOCAL FORWARD -3.5964 0.72872 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66127 1.37480 1.44227 1.13688 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:34 2012 NSEQ 5 EFFN 3.383789 CKSUM 3789775781 STATS LOCAL MSV -7.5808 0.71931 STATS LOCAL VITERBI -7.7977 0.71931 STATS LOCAL FORWARD -3.6708 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.42062 1.37585 1.52146 1.24681 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 0.00000 * 1 3.45541 0.12758 3.50392 2.84521 1 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 2 2.96099 3.60737 0.11504 3.51408 2 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 3 3.45541 0.12758 3.50392 2.84521 3 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 4 3.45541 0.12758 3.50392 2.84521 4 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 5 3.10820 2.60760 3.15560 0.17555 5 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 6 0.13936 3.39963 2.81449 3.30313 6 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 7 2.96099 3.60737 0.11504 3.51408 7 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 8 3.10820 2.60760 3.15560 0.17555 8 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 9 0.13936 3.39963 2.81449 3.30313 9 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 10 2.96099 3.60737 0.11504 3.51408 10 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 11 3.10820 2.60760 3.15560 0.17555 11 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 12 3.45541 0.12758 3.50392 2.84521 12 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 13 0.13936 3.39963 2.81449 3.30313 13 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 14 0.13936 3.39963 2.81449 3.30313 14 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 15 3.10820 2.60760 3.15560 0.17555 15 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 16 3.45541 0.12758 3.50392 2.84521 16 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 17 3.10820 2.60760 3.15560 0.17555 17 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 18 0.33147 2.87530 1.82228 2.74770 18 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 19 3.45541 0.12758 3.50392 2.84521 19 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 20 3.10820 2.60760 3.15560 0.17555 20 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 21 0.13936 3.39963 2.81449 3.30313 21 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 22 2.96099 3.60737 0.11504 3.51408 22 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 23 2.96099 3.60737 0.11504 3.51408 23 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 24 3.45541 0.12758 3.50392 2.84521 24 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 25 0.13936 3.39963 2.81449 3.30313 25 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 26 3.45541 0.12758 3.50392 2.84521 26 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 27 0.13936 3.39963 2.81449 3.30313 27 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 28 2.96099 3.60737 0.11504 3.51408 28 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 29 3.10820 2.60760 3.15560 0.17555 29 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 30 3.10820 2.60760 3.15560 0.17555 30 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 31 2.96099 3.60737 0.11504 3.51408 31 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 32 3.10820 2.60760 3.15560 0.17555 32 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 33 3.10820 2.60760 3.15560 0.17555 33 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 34 3.10820 2.60760 3.15560 0.17555 34 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 35 3.45541 0.12758 3.50392 2.84521 35 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 36 0.13936 3.39963 2.81449 3.30313 36 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 37 2.96099 3.60737 0.11504 3.51408 37 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 38 3.10820 2.60760 3.15560 0.17555 38 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 39 0.13936 3.39963 2.81449 3.30313 39 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 40 3.10820 2.60760 3.15560 0.17555 40 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 41 3.45541 0.12758 3.50392 2.84521 41 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 42 3.10820 2.60760 3.15560 0.17555 42 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 43 2.96099 3.60737 0.11504 3.51408 43 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 44 3.45541 0.12758 3.50392 2.84521 44 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 45 0.13936 3.39963 2.81449 3.30313 45 - - 1.38629 1.38629 1.38629 1.38629 0.01840 4.00438 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:38 2012 NSEQ 3 EFFN 3.000000 CKSUM 3300810471 STATS LOCAL MSV -8.0023 0.72044 STATS LOCAL VITERBI -7.7611 0.72044 STATS LOCAL FORWARD -4.2969 0.72044 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80885 1.37759 1.26060 1.20234 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.97980 2.52563 3.03204 0.19727 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.97980 2.52563 3.03204 0.19727 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:29 2012 NSEQ 3 EFFN 3.000000 CKSUM 1074163483 STATS LOCAL MSV -7.9489 0.72046 STATS LOCAL VITERBI -7.8068 0.72046 STATS LOCAL FORWARD -4.0882 0.72046 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40598 1.38391 1.44710 1.31295 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:37 2012 NSEQ 3 EFFN 3.000000 CKSUM 2036981238 STATS LOCAL MSV -7.6653 0.72065 STATS LOCAL VITERBI -7.8035 0.72065 STATS LOCAL FORWARD -3.9699 0.72065 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27918 1.44870 1.59917 1.25598 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyonec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:45 2012 NSEQ 4 EFFN 3.558594 CKSUM 2902108556 STATS LOCAL MSV -7.5600 0.71932 STATS LOCAL VITERBI -7.8244 0.71932 STATS LOCAL FORWARD -4.2647 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33114 1.39430 1.54074 1.29611 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 0.00000 * 1 2.99754 3.66093 0.10946 3.57332 1 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 2 3.51660 0.12068 3.56245 2.88939 2 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 3 2.99754 3.66093 0.10946 3.57332 3 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 4 2.32216 0.52913 1.62865 2.14876 4 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 5 3.16254 2.64208 3.20785 0.16721 5 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 6 3.51660 0.12068 3.56245 2.88939 6 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 7 0.13267 3.45290 2.84891 3.36153 7 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 8 0.13267 3.45290 2.84891 3.36153 8 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 9 3.16254 2.64208 3.20785 0.16721 9 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 10 2.99754 3.66093 0.10946 3.57332 10 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 11 2.99754 3.66093 0.10946 3.57332 11 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 12 3.16254 2.64208 3.20785 0.16721 12 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 13 0.13267 3.45290 2.84891 3.36153 13 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 14 3.16254 2.64208 3.20785 0.16721 14 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 15 3.16254 2.64208 3.20785 0.16721 15 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 16 3.51660 0.12068 3.56245 2.88939 16 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 17 3.51660 0.12068 3.56245 2.88939 17 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 18 0.13267 3.45290 2.84891 3.36153 18 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 19 3.16254 2.64208 3.20785 0.16721 19 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 20 3.16254 2.64208 3.20785 0.16721 20 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 21 2.99754 3.66093 0.10946 3.57332 21 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 22 0.13267 3.45290 2.84891 3.36153 22 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 23 2.29468 1.69642 0.48124 2.32432 23 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 24 3.51660 0.12068 3.56245 2.88939 24 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 25 0.13267 3.45290 2.84891 3.36153 25 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 26 3.51660 0.12068 3.56245 2.88939 26 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 27 2.99754 3.66093 0.10946 3.57332 27 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 28 3.51660 0.12068 3.56245 2.88939 28 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 29 3.51660 0.12068 3.56245 2.88939 29 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 30 3.16254 2.64208 3.20785 0.16721 30 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 31 2.99754 3.66093 0.10946 3.57332 31 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 32 3.16254 2.64208 3.20785 0.16721 32 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 33 3.16254 2.64208 3.20785 0.16721 33 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 34 3.16254 2.64208 3.20785 0.16721 34 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 35 3.51660 0.12068 3.56245 2.88939 35 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 36 0.13267 3.45290 2.84891 3.36153 36 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 37 2.99754 3.66093 0.10946 3.57332 37 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 38 3.16254 2.64208 3.20785 0.16721 38 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 39 0.13267 3.45290 2.84891 3.36153 39 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 40 3.16254 2.64208 3.20785 0.16721 40 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 41 3.51660 0.12068 3.56245 2.88939 41 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 42 0.13267 3.45290 2.84891 3.36153 42 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 43 0.13267 3.45290 2.84891 3.36153 43 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 44 0.13267 3.45290 2.84891 3.36153 44 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05328 4.05328 1.46634 0.26236 1.09861 0.40547 45 0.13267 3.45290 2.84891 3.36153 45 - - 1.38629 1.38629 1.38629 1.38629 0.01783 4.03576 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyoned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:51 2012 NSEQ 2 EFFN 2.000000 CKSUM 4171626406 STATS LOCAL MSV -7.3070 0.72827 STATS LOCAL VITERBI -8.3870 0.72827 STATS LOCAL FORWARD -3.5109 0.72827 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39995 1.39200 1.43261 1.32379 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:16 2012 NSEQ 2 EFFN 2.000000 CKSUM 650888368 STATS LOCAL MSV -7.3946 0.72790 STATS LOCAL VITERBI -8.2462 0.72790 STATS LOCAL FORWARD -3.2358 0.72790 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51987 1.39755 1.26525 1.37877 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventysixa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:54 2012 NSEQ 3 EFFN 3.000000 CKSUM 118054322 STATS LOCAL MSV -7.9824 0.72074 STATS LOCAL VITERBI -7.7979 0.72074 STATS LOCAL FORWARD -3.7823 0.72074 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47365 1.44202 1.52325 1.15055 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventysixb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:08:02 2012 NSEQ 4 EFFN 3.402344 CKSUM 1924703099 STATS LOCAL MSV -7.5718 0.71933 STATS LOCAL VITERBI -7.7518 0.71933 STATS LOCAL FORWARD -3.9502 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33919 1.51570 1.70167 1.09091 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 0.00000 * 1 2.96500 3.61323 0.11441 3.52056 1 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 2 3.46209 0.12680 3.51031 2.85005 2 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 3 0.13862 3.40543 2.81825 3.30949 3 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 4 3.46209 0.12680 3.51031 2.85005 4 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 5 3.11409 2.61134 3.16126 0.17462 5 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 6 3.46209 0.12680 3.51031 2.85005 6 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 7 3.11409 2.61134 3.16126 0.17462 7 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 8 3.11409 2.61134 3.16126 0.17462 8 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 9 3.11409 2.61134 3.16126 0.17462 9 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 10 2.96500 3.61323 0.11441 3.52056 10 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 11 2.96500 3.61323 0.11441 3.52056 11 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 12 3.11409 2.61134 3.16126 0.17462 12 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 13 0.13862 3.40543 2.81825 3.30949 13 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 14 3.11409 2.61134 3.16126 0.17462 14 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 15 3.11409 2.61134 3.16126 0.17462 15 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 16 3.46209 0.12680 3.51031 2.85005 16 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 17 3.46209 0.12680 3.51031 2.85005 17 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 18 0.13862 3.40543 2.81825 3.30949 18 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 19 0.13862 3.40543 2.81825 3.30949 19 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 20 0.13862 3.40543 2.81825 3.30949 20 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 21 2.96500 3.61323 0.11441 3.52056 21 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 22 0.13862 3.40543 2.81825 3.30949 22 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 23 2.96500 3.61323 0.11441 3.52056 23 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 24 3.11409 2.61134 3.16126 0.17462 24 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 25 0.13862 3.40543 2.81825 3.30949 25 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 26 3.46209 0.12680 3.51031 2.85005 26 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 27 0.13862 3.40543 2.81825 3.30949 27 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 28 3.46209 0.12680 3.51031 2.85005 28 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 29 3.11409 2.61134 3.16126 0.17462 29 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 30 3.11409 2.61134 3.16126 0.17462 30 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 31 2.96500 3.61323 0.11441 3.52056 31 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 32 3.11409 2.61134 3.16126 0.17462 32 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 33 3.11409 2.61134 3.16126 0.17462 33 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 34 3.11409 2.61134 3.16126 0.17462 34 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 35 3.46209 0.12680 3.51031 2.85005 35 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 36 0.13862 3.40543 2.81825 3.30949 36 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 37 2.96500 3.61323 0.11441 3.52056 37 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 38 3.11409 2.61134 3.16126 0.17462 38 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 39 0.13862 3.40543 2.81825 3.30949 39 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 40 3.11409 2.61134 3.16126 0.17462 40 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 41 3.46209 0.12680 3.51031 2.85005 41 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 42 0.13862 3.40543 2.81825 3.30949 42 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 43 3.11409 2.61134 3.16126 0.17462 43 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 44 0.13862 3.40543 2.81825 3.30949 44 - - 1.38629 1.38629 1.38629 1.38629 0.03635 4.02577 4.02577 1.46634 0.26236 1.09861 0.40547 45 3.11409 2.61134 3.16126 0.17462 45 - - 1.38629 1.38629 1.38629 1.38629 0.01834 4.00776 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:24 2012 NSEQ 9 EFFN 3.414551 CKSUM 983694200 STATS LOCAL MSV -7.3651 0.71931 STATS LOCAL VITERBI -7.7205 0.71931 STATS LOCAL FORWARD -4.0936 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.64507 1.37067 1.39072 1.19017 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 0.00000 * 1 2.96763 3.61706 0.11400 3.52480 1 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 2 3.46646 0.12630 3.51449 2.85321 2 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 3 0.13813 3.40923 2.82071 3.31365 3 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 4 3.46646 0.12630 3.51449 2.85321 4 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 5 3.11794 2.61378 3.16497 0.17402 5 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 6 3.46646 0.12630 3.51449 2.85321 6 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 7 0.13813 3.40923 2.82071 3.31365 7 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 8 3.46646 0.12630 3.51449 2.85321 8 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 9 3.11794 2.61378 3.16497 0.17402 9 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 10 2.96763 3.61706 0.11400 3.52480 10 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 11 2.96763 3.61706 0.11400 3.52480 11 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 12 3.11794 2.61378 3.16497 0.17402 12 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 13 0.13813 3.40923 2.82071 3.31365 13 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 14 3.11794 2.61378 3.16497 0.17402 14 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 15 3.11794 2.61378 3.16497 0.17402 15 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 16 3.46646 0.12630 3.51449 2.85321 16 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 17 3.46646 0.12630 3.51449 2.85321 17 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 18 2.96763 3.61706 0.11400 3.52480 18 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 19 2.96763 3.61706 0.11400 3.52480 19 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 20 3.11794 2.61378 3.16497 0.17402 20 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 21 2.96763 3.61706 0.11400 3.52480 21 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 22 0.13813 3.40923 2.82071 3.31365 22 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 23 2.96763 3.61706 0.11400 3.52480 23 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 24 3.11794 2.61378 3.16497 0.17402 24 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 25 0.13813 3.40923 2.82071 3.31365 25 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 26 3.46646 0.12630 3.51449 2.85321 26 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 27 2.59250 2.39120 0.25845 2.79036 27 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 28 3.46646 0.12630 3.51449 2.85321 28 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 29 3.46646 0.12630 3.51449 2.85321 29 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 30 3.11794 2.61378 3.16497 0.17402 30 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 31 2.96763 3.61706 0.11400 3.52480 31 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 32 3.11794 2.61378 3.16497 0.17402 32 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 33 3.11794 2.61378 3.16497 0.17402 33 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 34 3.11794 2.61378 3.16497 0.17402 34 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 35 3.46646 0.12630 3.51449 2.85321 35 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 36 0.13813 3.40923 2.82071 3.31365 36 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 37 2.96763 3.61706 0.11400 3.52480 37 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 38 3.11794 2.61378 3.16497 0.17402 38 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 39 0.13813 3.40923 2.82071 3.31365 39 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 40 3.11794 2.61378 3.16497 0.17402 40 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 41 3.46646 0.12630 3.51449 2.85321 41 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 42 0.23681 3.08800 2.17059 2.97293 42 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 43 3.11794 2.61378 3.16497 0.17402 43 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 44 3.11794 2.61378 3.16497 0.17402 44 - - 1.38629 1.38629 1.38629 1.38629 0.03627 4.02795 4.02795 1.46634 0.26236 1.09861 0.40547 45 2.96763 3.61706 0.11400 3.52480 45 - - 1.38629 1.38629 1.38629 1.38629 0.01830 4.00998 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventytwoa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:05 2012 NSEQ 2 EFFN 2.000000 CKSUM 2846805506 STATS LOCAL MSV -7.2822 0.72899 STATS LOCAL VITERBI -8.3416 0.72899 STATS LOCAL FORWARD -3.6624 0.72899 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45871 1.37330 1.64708 1.13450 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_seventytwob_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:07:12 2012 NSEQ 2 EFFN 2.000000 CKSUM 2867399312 STATS LOCAL MSV -7.3807 0.72839 STATS LOCAL VITERBI -8.4535 0.72839 STATS LOCAL FORWARD -3.5163 0.72839 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39695 1.44760 1.43519 1.27495 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:46:07 2012 NSEQ 8 EFFN 3.238281 CKSUM 2893228350 STATS LOCAL MSV -8.0085 0.71933 STATS LOCAL VITERBI -7.8922 0.71933 STATS LOCAL FORWARD -3.9366 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.95135 1.19921 1.19729 1.36856 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 2.92831 3.55987 0.12026 3.46167 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 3.40150 0.13404 3.45229 2.80593 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 2.92831 3.55987 0.12026 3.46167 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.40150 0.13404 3.45229 2.80593 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 3.40150 0.13404 3.45229 2.80593 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 3.40150 0.13404 3.45229 2.80593 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 2.92831 3.55987 0.12026 3.46167 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.40150 0.13404 3.45229 2.80593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 3.06103 2.57758 3.11024 0.18319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 2.92831 3.55987 0.12026 3.46167 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 2.92831 3.55987 0.12026 3.46167 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 3.06103 2.57758 3.11024 0.18319 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 0.14557 3.35286 2.78409 3.25194 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 3.06103 2.57758 3.11024 0.18319 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 3.40150 0.13404 3.45229 2.80593 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 3.40150 0.13404 3.45229 2.80593 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 0.26026 3.00055 2.09347 2.88010 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 2.92831 3.55987 0.12026 3.46167 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 3.40150 0.13404 3.45229 2.80593 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 2.92831 3.55987 0.12026 3.46167 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 2.92831 3.55987 0.12026 3.46167 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 2.92831 3.55987 0.12026 3.46167 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 3.40150 0.13404 3.45229 2.80593 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 0.14557 3.35286 2.78409 3.25194 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 3.06103 2.57758 3.11024 0.18319 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 2.92831 3.55987 0.12026 3.46167 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.40150 0.13404 3.45229 2.80593 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 3.06103 2.57758 3.11024 0.18319 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 2.92831 3.55987 0.12026 3.46167 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 3.06103 2.57758 3.11024 0.18319 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 3.06103 2.57758 3.11024 0.18319 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 3.40150 0.13404 3.45229 2.80593 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 2.92831 3.55987 0.12026 3.46167 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 0.14557 3.35286 2.78409 3.25194 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 2.92831 3.55987 0.12026 3.46167 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.40150 0.13404 3.45229 2.80593 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 2.92831 3.55987 0.12026 3.46167 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 3.06103 2.57758 3.11024 0.18319 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 3.40150 0.13404 3.45229 2.80593 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 0.14557 3.35286 2.78409 3.25194 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 3.06103 2.57758 3.11024 0.18319 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 3.06103 2.57758 3.11024 0.18319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 3.06103 2.57758 3.11024 0.18319 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:48:43 2012 NSEQ 6 EFFN 3.383789 CKSUM 1847283196 STATS LOCAL MSV -7.4356 0.71933 STATS LOCAL VITERBI -7.5824 0.71933 STATS LOCAL FORWARD -4.2129 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72596 1.34056 1.31756 1.22925 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 0.00000 * 1 3.10820 2.60760 3.15560 0.17555 1 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 2 3.10820 2.60760 3.15560 0.17555 2 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 3 2.96099 3.60737 0.11504 3.51408 3 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 4 3.45541 0.12758 3.50392 2.84521 4 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 5 2.96099 3.60737 0.11504 3.51408 5 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 6 3.45541 0.12758 3.50392 2.84521 6 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 7 3.45541 0.12758 3.50392 2.84521 7 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 8 3.10820 2.60760 3.15560 0.17555 8 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 9 3.45541 0.12758 3.50392 2.84521 9 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 10 2.50867 0.59747 2.58044 1.22867 10 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 11 0.13936 3.39963 2.81449 3.30313 11 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 12 2.96099 3.60737 0.11504 3.51408 12 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 13 3.10820 2.60760 3.15560 0.17555 13 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 14 0.13936 3.39963 2.81449 3.30313 14 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 15 0.13936 3.39963 2.81449 3.30313 15 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 16 3.45541 0.12758 3.50392 2.84521 16 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 17 3.10820 2.60760 3.15560 0.17555 17 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 18 3.10820 2.60760 3.15560 0.17555 18 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 19 2.96099 3.60737 0.11504 3.51408 19 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 20 2.96099 3.60737 0.11504 3.51408 20 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 21 0.13936 3.39963 2.81449 3.30313 21 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 22 2.96099 3.60737 0.11504 3.51408 22 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 23 2.96099 3.60737 0.11504 3.51408 23 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 24 3.45541 0.12758 3.50392 2.84521 24 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 25 0.13936 3.39963 2.81449 3.30313 25 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 26 3.10820 2.60760 3.15560 0.17555 26 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 27 2.96099 3.60737 0.11504 3.51408 27 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 28 3.45541 0.12758 3.50392 2.84521 28 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 29 3.45541 0.12758 3.50392 2.84521 29 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 30 3.10820 2.60760 3.15560 0.17555 30 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 31 2.96099 3.60737 0.11504 3.51408 31 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 32 3.10820 2.60760 3.15560 0.17555 32 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 33 3.45541 0.12758 3.50392 2.84521 33 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 34 3.10820 2.60760 3.15560 0.17555 34 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 35 2.96099 3.60737 0.11504 3.51408 35 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 36 0.13936 3.39963 2.81449 3.30313 36 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 37 2.96099 3.60737 0.11504 3.51408 37 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 38 3.45541 0.12758 3.50392 2.84521 38 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 39 2.96099 3.60737 0.11504 3.51408 39 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 40 3.10820 2.60760 3.15560 0.17555 40 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 41 3.45541 0.12758 3.50392 2.84521 41 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 42 0.13936 3.39963 2.81449 3.30313 42 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 43 3.10820 2.60760 3.15560 0.17555 43 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 44 3.10820 2.60760 3.15560 0.17555 44 - - 1.38629 1.38629 1.38629 1.38629 0.03648 4.02245 4.02245 1.46634 0.26236 1.09861 0.40547 45 3.10820 2.60760 3.15560 0.17555 45 - - 1.38629 1.38629 1.38629 1.38629 0.01840 4.00438 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtya_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:03:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 4213980350 STATS LOCAL MSV -7.3882 0.72825 STATS LOCAL VITERBI -8.1786 0.72825 STATS LOCAL FORWARD -3.4656 0.72825 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58659 1.50986 1.26375 1.23153 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:06 2012 NSEQ 5 EFFN 3.334961 CKSUM 2251782121 STATS LOCAL MSV -8.1797 0.71932 STATS LOCAL VITERBI -7.7108 0.71932 STATS LOCAL FORWARD -4.2099 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.69817 1.31618 1.22414 1.36722 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 * 1 3.43763 0.12967 3.48690 2.83229 1 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 2 2.95026 3.59174 0.11672 3.49682 2 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 3 3.43763 0.12967 3.48690 2.83229 3 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 4 3.09257 2.59766 3.14057 0.17804 4 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 5 3.43763 0.12967 3.48690 2.83229 5 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 6 3.09257 2.59766 3.14057 0.17804 6 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 7 3.43763 0.12967 3.48690 2.83229 7 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 8 2.95026 3.59174 0.11672 3.49682 8 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 9 2.95026 3.59174 0.11672 3.49682 9 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 10 2.95026 3.59174 0.11672 3.49682 10 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 11 0.14138 3.38419 2.80447 3.28622 11 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 12 3.09257 2.59766 3.14057 0.17804 12 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 13 0.14138 3.38419 2.80447 3.28622 13 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 14 2.95026 3.59174 0.11672 3.49682 14 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 15 2.95026 3.59174 0.11672 3.49682 15 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 16 3.43763 0.12967 3.48690 2.83229 16 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 17 3.43763 0.12967 3.48690 2.83229 17 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 18 3.09257 2.59766 3.14057 0.17804 18 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 19 2.95026 3.59174 0.11672 3.49682 19 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 20 1.13995 2.56932 0.66342 2.42486 20 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 21 2.95026 3.59174 0.11672 3.49682 21 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 22 0.14138 3.38419 2.80447 3.28622 22 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 23 2.95026 3.59174 0.11672 3.49682 23 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 24 3.43763 0.12967 3.48690 2.83229 24 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 25 0.14138 3.38419 2.80447 3.28622 25 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 26 3.43763 0.12967 3.48690 2.83229 26 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 27 2.95026 3.59174 0.11672 3.49682 27 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 28 3.43763 0.12967 3.48690 2.83229 28 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 29 3.43763 0.12967 3.48690 2.83229 29 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 30 3.09257 2.59766 3.14057 0.17804 30 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 31 3.43763 0.12967 3.48690 2.83229 31 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 32 3.09257 2.59766 3.14057 0.17804 32 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 33 3.09257 2.59766 3.14057 0.17804 33 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 34 3.09257 2.59766 3.14057 0.17804 34 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 35 2.95026 3.59174 0.11672 3.49682 35 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 36 0.14138 3.38419 2.80447 3.28622 36 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 37 2.95026 3.59174 0.11672 3.49682 37 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 38 3.09257 2.59766 3.14057 0.17804 38 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 39 0.14138 3.38419 2.80447 3.28622 39 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 40 3.09257 2.59766 3.14057 0.17804 40 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 41 3.43763 0.12967 3.48690 2.83229 41 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 42 2.95026 3.59174 0.11672 3.49682 42 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 43 0.14138 3.38419 2.80447 3.28622 43 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 44 3.09257 2.59766 3.14057 0.17804 44 - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 45 3.09257 2.59766 3.14057 0.17804 45 - - 1.38629 1.38629 1.38629 1.38629 0.01857 3.99544 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:12 2012 NSEQ 3 EFFN 3.000000 CKSUM 106256701 STATS LOCAL MSV -8.1740 0.72051 STATS LOCAL VITERBI -7.8223 0.72051 STATS LOCAL FORWARD -3.8706 0.72051 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62782 1.44610 1.31712 1.20314 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:18 2012 NSEQ 3 EFFN 3.000000 CKSUM 3321474794 STATS LOCAL MSV -8.1205 0.72037 STATS LOCAL VITERBI -7.9782 0.72037 STATS LOCAL FORWARD -4.0244 0.72037 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.71608 1.38098 1.25796 1.25644 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtye_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 4026532220 STATS LOCAL MSV -7.5442 0.72823 STATS LOCAL VITERBI -8.2751 0.72823 STATS LOCAL FORWARD -3.5228 0.72823 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74044 1.38541 1.26840 1.22739 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.81865 0.23582 2.88868 2.35662 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 2512108983 STATS LOCAL MSV -7.2279 0.72955 STATS LOCAL VITERBI -8.2899 0.72955 STATS LOCAL FORWARD -3.6203 0.72955 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.36963 1.56055 1.53680 1.13723 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.92825 2.28391 0.95698 2.13014 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:31 2012 NSEQ 2 EFFN 2.000000 CKSUM 2040754891 STATS LOCAL MSV -7.4428 0.72807 STATS LOCAL VITERBI -8.2000 0.72807 STATS LOCAL FORWARD -3.1630 0.72807 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74642 1.22971 1.32523 1.31870 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:05:34 2012 NSEQ 6 EFFN 3.372070 CKSUM 2895015578 STATS LOCAL MSV -7.3878 0.71932 STATS LOCAL VITERBI -7.6194 0.71932 STATS LOCAL FORWARD -4.0728 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72201 1.29060 1.31826 1.27802 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 0.00000 * 1 0.13984 3.39595 2.81210 3.29910 1 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 2 3.45117 0.12807 3.49986 2.84213 2 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 3 2.95844 3.60364 0.11544 3.50997 3 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 4 3.45117 0.12807 3.49986 2.84213 4 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 5 0.13984 3.39595 2.81210 3.29910 5 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 6 0.13984 3.39595 2.81210 3.29910 6 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 7 3.45117 0.12807 3.49986 2.84213 7 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 8 3.10447 2.60522 3.15201 0.17614 8 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 9 3.10447 2.60522 3.15201 0.17614 9 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 10 2.95844 3.60364 0.11544 3.50997 10 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 11 3.45117 0.12807 3.49986 2.84213 11 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 12 2.95844 3.60364 0.11544 3.50997 12 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 13 3.45117 0.12807 3.49986 2.84213 13 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 14 3.45117 0.12807 3.49986 2.84213 14 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 15 3.10447 2.60522 3.15201 0.17614 15 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 16 3.45117 0.12807 3.49986 2.84213 16 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 17 3.10447 2.60522 3.15201 0.17614 17 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 18 2.41418 0.95592 2.48617 0.81447 18 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 19 3.10447 2.60522 3.15201 0.17614 19 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 20 2.95844 3.60364 0.11544 3.50997 20 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 21 0.13984 3.39595 2.81210 3.29910 21 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 22 2.95844 3.60364 0.11544 3.50997 22 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 23 2.95844 3.60364 0.11544 3.50997 23 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 24 3.45117 0.12807 3.49986 2.84213 24 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 25 0.13984 3.39595 2.81210 3.29910 25 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 26 3.10447 2.60522 3.15201 0.17614 26 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 27 2.95844 3.60364 0.11544 3.50997 27 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 28 3.10447 2.60522 3.15201 0.17614 28 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 29 3.45117 0.12807 3.49986 2.84213 29 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 30 3.10447 2.60522 3.15201 0.17614 30 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 31 2.95844 3.60364 0.11544 3.50997 31 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 32 3.10447 2.60522 3.15201 0.17614 32 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 33 3.10447 2.60522 3.15201 0.17614 33 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 34 3.10447 2.60522 3.15201 0.17614 34 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 35 2.95844 3.60364 0.11544 3.50997 35 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 36 0.13984 3.39595 2.81210 3.29910 36 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 37 2.95844 3.60364 0.11544 3.50997 37 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 38 3.10447 2.60522 3.15201 0.17614 38 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 39 2.95844 3.60364 0.11544 3.50997 39 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 40 3.45117 0.12807 3.49986 2.84213 40 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 41 3.45117 0.12807 3.49986 2.84213 41 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 42 2.95844 3.60364 0.11544 3.50997 42 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 43 3.45117 0.12807 3.49986 2.84213 43 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 44 0.13984 3.39595 2.81210 3.29910 44 - - 1.38629 1.38629 1.38629 1.38629 0.03655 4.02035 4.02035 1.46634 0.26236 1.09861 0.40547 45 3.10447 2.60522 3.15201 0.17614 45 - - 1.38629 1.38629 1.38629 1.38629 0.01844 4.00224 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:05:18 2012 NSEQ 36 EFFN 4.047363 CKSUM 1196295191 STATS LOCAL MSV -7.3702 0.71933 STATS LOCAL VITERBI -7.7286 0.71933 STATS LOCAL FORWARD -4.4133 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45008 1.51155 1.41786 1.19518 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 0.00000 * 1 3.08666 3.79275 0.09699 3.71956 1 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 2 3.51109 0.13660 3.55646 2.66963 2 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 3 0.41290 2.85272 1.53771 2.72243 3 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 4 3.49070 0.14100 3.53691 2.63205 4 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 5 3.66881 0.10529 3.70772 2.99779 5 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 6 3.18168 2.41552 3.22691 0.18695 6 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 7 3.30202 2.73055 3.34185 0.14776 7 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 8 3.30202 2.73055 3.34185 0.14776 8 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 9 3.30202 2.73055 3.34185 0.14776 9 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 10 2.73819 3.64770 0.12680 3.56306 10 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 11 3.08666 3.79275 0.09699 3.71956 11 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 12 3.30202 2.73055 3.34185 0.14776 12 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 13 0.16988 3.29195 2.81025 2.83259 13 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 14 2.30047 2.53317 2.87742 0.26905 14 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 15 3.30202 2.73055 3.34185 0.14776 15 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 16 3.66881 0.10529 3.70772 2.99779 16 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 17 3.49070 0.14100 3.53691 2.63205 17 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 18 0.17663 3.36716 2.41372 3.27172 18 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 19 0.18146 3.35134 2.38258 3.25459 19 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 20 0.19522 3.30777 2.29970 3.20751 20 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 21 0.15072 3.45717 2.60401 3.36926 21 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 22 3.08666 3.79275 0.09699 3.71956 22 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 23 3.08666 3.79275 0.09699 3.71956 23 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 24 2.75196 1.55178 2.81459 0.40887 24 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 25 0.11741 3.58662 2.93481 3.50843 25 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 26 3.49070 0.14100 3.53691 2.63205 26 - - 1.38629 1.38629 1.38629 1.38629 0.04815 4.13474 3.47371 1.46634 0.26236 1.09861 0.40547 27 0.37011 2.89964 1.65146 2.77218 27 - - 1.38629 1.38629 1.38629 1.38629 0.03304 4.11964 4.11964 1.46634 0.26236 0.70933 0.67722 28 3.66881 0.10529 3.70772 2.99779 28 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 29 3.66881 0.10529 3.70772 2.99779 29 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 30 3.30202 2.73055 3.34185 0.14776 30 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 31 3.08666 3.79275 0.09699 3.71956 31 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 32 3.30202 2.73055 3.34185 0.14776 32 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 33 3.30202 2.73055 3.34185 0.14776 33 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 34 3.30202 2.73055 3.34185 0.14776 34 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 35 3.08666 3.79275 0.09699 3.71956 35 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 36 0.11741 3.58662 2.93481 3.50843 36 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 37 2.53333 3.54105 0.15106 3.44742 37 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 38 3.30202 2.73055 3.34185 0.14776 38 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 39 3.08666 3.79275 0.09699 3.71956 39 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 40 3.30202 2.73055 3.34185 0.14776 40 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 41 3.66881 0.10529 3.70772 2.99779 41 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 42 0.11741 3.58662 2.93481 3.50843 42 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 43 3.10336 2.23715 3.15214 0.21619 43 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 44 3.08666 3.79275 0.09699 3.71956 44 - - 1.38629 1.38629 1.38629 1.38629 0.03254 4.13474 4.13474 1.46634 0.26236 1.09861 0.40547 45 0.11741 3.58662 2.93481 3.50843 45 - - 1.38629 1.38629 1.38629 1.38629 0.01640 4.11861 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:06:15 2012 NSEQ 4 EFFN 3.371094 CKSUM 3562108835 STATS LOCAL MSV -7.3552 0.71933 STATS LOCAL VITERBI -7.6469 0.71933 STATS LOCAL FORWARD -4.1958 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33267 1.69151 1.30646 1.26866 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 0.00000 * 1 3.10416 2.60503 3.15172 0.17619 1 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 2 2.95822 3.60333 0.11547 3.50963 2 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 3 2.95822 3.60333 0.11547 3.50963 3 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 4 3.45082 0.12812 3.49952 2.84187 4 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 5 0.13988 3.39564 2.81190 3.29876 5 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 6 3.45082 0.12812 3.49952 2.84187 6 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 7 3.10416 2.60503 3.15172 0.17619 7 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 8 2.95822 3.60333 0.11547 3.50963 8 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 9 3.10416 2.60503 3.15172 0.17619 9 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 10 3.10416 2.60503 3.15172 0.17619 10 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 11 0.13988 3.39564 2.81190 3.29876 11 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 12 3.45082 0.12812 3.49952 2.84187 12 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 13 2.95822 3.60333 0.11547 3.50963 13 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 14 2.60936 1.56743 2.67468 0.43246 14 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 15 0.13988 3.39564 2.81190 3.29876 15 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 16 0.13988 3.39564 2.81190 3.29876 16 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 17 2.95822 3.60333 0.11547 3.50963 17 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 18 3.10416 2.60503 3.15172 0.17619 18 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 19 0.13988 3.39564 2.81190 3.29876 19 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 20 2.95822 3.60333 0.11547 3.50963 20 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 21 3.45082 0.12812 3.49952 2.84187 21 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 22 0.13988 3.39564 2.81190 3.29876 22 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 23 2.95822 3.60333 0.11547 3.50963 23 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 24 3.10416 2.60503 3.15172 0.17619 24 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 25 0.13988 3.39564 2.81190 3.29876 25 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 26 3.10416 2.60503 3.15172 0.17619 26 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 27 2.95822 3.60333 0.11547 3.50963 27 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 28 3.10416 2.60503 3.15172 0.17619 28 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 29 3.45082 0.12812 3.49952 2.84187 29 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 30 3.10416 2.60503 3.15172 0.17619 30 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 31 2.95822 3.60333 0.11547 3.50963 31 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 32 3.10416 2.60503 3.15172 0.17619 32 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 33 3.10416 2.60503 3.15172 0.17619 33 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 34 3.10416 2.60503 3.15172 0.17619 34 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 35 2.95822 3.60333 0.11547 3.50963 35 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 36 0.13988 3.39564 2.81190 3.29876 36 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 37 2.95822 3.60333 0.11547 3.50963 37 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 38 0.13988 3.39564 2.81190 3.29876 38 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 39 0.13988 3.39564 2.81190 3.29876 39 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 40 3.10416 2.60503 3.15172 0.17619 40 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 41 3.45082 0.12812 3.49952 2.84187 41 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 42 2.95822 3.60333 0.11547 3.50963 42 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 43 3.45082 0.12812 3.49952 2.84187 43 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 44 0.13988 3.39564 2.81190 3.29876 44 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02018 4.02018 1.46634 0.26236 1.09861 0.40547 45 0.13988 3.39564 2.81190 3.29876 45 - - 1.38629 1.38629 1.38629 1.38629 0.01845 4.00206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:41 2012 NSEQ 18 EFFN 3.370605 CKSUM 568229740 STATS LOCAL MSV -7.4719 0.71932 STATS LOCAL VITERBI -7.5989 0.71932 STATS LOCAL FORWARD -3.9398 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82049 1.21053 1.25453 1.36726 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 0.00000 * 1 2.95812 3.60318 0.11549 3.50945 1 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 2 3.45064 0.12814 3.49935 2.84174 2 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 3 2.95812 3.60318 0.11549 3.50945 3 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 4 3.45064 0.12814 3.49935 2.84174 4 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 5 3.10400 2.60493 3.15157 0.17622 5 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 6 2.98908 0.25519 3.05145 2.05883 6 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 7 2.81899 1.97861 2.87714 0.29333 7 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 8 3.10400 2.60493 3.15157 0.17622 8 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 9 2.95812 3.60318 0.11549 3.50945 9 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 10 2.95812 3.60318 0.11549 3.50945 10 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 11 2.95812 3.60318 0.11549 3.50945 11 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 12 3.10400 2.60493 3.15157 0.17622 12 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 13 0.13990 3.39548 2.81180 3.29859 13 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 14 2.95812 3.60318 0.11549 3.50945 14 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 15 3.45064 0.12814 3.49935 2.84174 15 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 16 3.45064 0.12814 3.49935 2.84174 16 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 17 3.45064 0.12814 3.49935 2.84174 17 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 18 3.10400 2.60493 3.15157 0.17622 18 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 19 0.13990 3.39548 2.81180 3.29859 19 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 20 2.95812 3.60318 0.11549 3.50945 20 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 21 2.95812 3.60318 0.11549 3.50945 21 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 22 0.13990 3.39548 2.81180 3.29859 22 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 23 2.95812 3.60318 0.11549 3.50945 23 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 24 3.45064 0.12814 3.49935 2.84174 24 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 25 0.13990 3.39548 2.81180 3.29859 25 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 26 3.45064 0.12814 3.49935 2.84174 26 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 27 2.95812 3.60318 0.11549 3.50945 27 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 28 3.45064 0.12814 3.49935 2.84174 28 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 29 3.45064 0.12814 3.49935 2.84174 29 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 30 3.10400 2.60493 3.15157 0.17622 30 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 31 2.23569 0.29857 2.78503 2.41381 31 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 32 3.10400 2.60493 3.15157 0.17622 32 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 33 3.45064 0.12814 3.49935 2.84174 33 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 34 3.10400 2.60493 3.15157 0.17622 34 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 35 3.45064 0.12814 3.49935 2.84174 35 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 36 0.13990 3.39548 2.81180 3.29859 36 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 37 2.95812 3.60318 0.11549 3.50945 37 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 38 3.10400 2.60493 3.15157 0.17622 38 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 39 0.13990 3.39548 2.81180 3.29859 39 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 40 3.10400 2.60493 3.15157 0.17622 40 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 41 3.45064 0.12814 3.49935 2.84174 41 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 42 2.95812 3.60318 0.11549 3.50945 42 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 43 2.95812 3.60318 0.11549 3.50945 43 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 44 3.10400 2.60493 3.15157 0.17622 44 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02009 4.02009 1.46634 0.26236 1.09861 0.40547 45 3.10400 2.60493 3.15157 0.17622 45 - - 1.38629 1.38629 1.38629 1.38629 0.01845 4.00197 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:47 2012 NSEQ 3 EFFN 3.000000 CKSUM 2470891325 STATS LOCAL MSV -7.7856 0.72100 STATS LOCAL VITERBI -7.7575 0.72100 STATS LOCAL FORWARD -3.5066 0.72100 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.78234 1.29954 1.30321 1.24674 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 1.21118 1.33798 1.26855 1.84174 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:05:53 2012 NSEQ 4 EFFN 3.363281 CKSUM 2919012323 STATS LOCAL MSV -8.0713 0.71931 STATS LOCAL VITERBI -7.6572 0.71931 STATS LOCAL FORWARD -4.3356 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27137 1.60274 1.37248 1.32905 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 0.00000 * 1 2.95651 3.60084 0.11574 3.50687 1 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 2 3.44798 0.12845 3.49681 2.83981 2 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 3 0.14020 3.39317 2.81030 3.29606 3 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 4 3.44798 0.12845 3.49681 2.83981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 5 3.44798 0.12845 3.49681 2.83981 5 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 6 2.95651 3.60084 0.11574 3.50687 6 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 7 3.10166 2.60344 3.14932 0.17659 7 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 8 0.14020 3.39317 2.81030 3.29606 8 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 9 3.10166 2.60344 3.14932 0.17659 9 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 10 2.95651 3.60084 0.11574 3.50687 10 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 11 0.14020 3.39317 2.81030 3.29606 11 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 12 2.95651 3.60084 0.11574 3.50687 12 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 13 3.44798 0.12845 3.49681 2.83981 13 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 14 0.14020 3.39317 2.81030 3.29606 14 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 15 0.14020 3.39317 2.81030 3.29606 15 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 16 3.10166 2.60344 3.14932 0.17659 16 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 17 2.60750 1.56728 2.67285 0.43292 17 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 18 2.95651 3.60084 0.11574 3.50687 18 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 19 3.10166 2.60344 3.14932 0.17659 19 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 20 0.14020 3.39317 2.81030 3.29606 20 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 21 3.44798 0.12845 3.49681 2.83981 21 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 22 2.95651 3.60084 0.11574 3.50687 22 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 23 2.95651 3.60084 0.11574 3.50687 23 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 24 3.10166 2.60344 3.14932 0.17659 24 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 25 0.14020 3.39317 2.81030 3.29606 25 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 26 3.10166 2.60344 3.14932 0.17659 26 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 27 0.14020 3.39317 2.81030 3.29606 27 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 28 3.44798 0.12845 3.49681 2.83981 28 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 29 3.44798 0.12845 3.49681 2.83981 29 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 30 3.10166 2.60344 3.14932 0.17659 30 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 31 2.95651 3.60084 0.11574 3.50687 31 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 32 3.10166 2.60344 3.14932 0.17659 32 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 33 3.10166 2.60344 3.14932 0.17659 33 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 34 3.10166 2.60344 3.14932 0.17659 34 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 35 2.95651 3.60084 0.11574 3.50687 35 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 36 0.14020 3.39317 2.81030 3.29606 36 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 37 2.95651 3.60084 0.11574 3.50687 37 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 38 0.14020 3.39317 2.81030 3.29606 38 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 39 0.14020 3.39317 2.81030 3.29606 39 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 40 3.10166 2.60344 3.14932 0.17659 40 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 41 3.44798 0.12845 3.49681 2.83981 41 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 42 2.95651 3.60084 0.11574 3.50687 42 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 43 3.10166 2.60344 3.14932 0.17659 43 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 44 0.14020 3.39317 2.81030 3.29606 44 - - 1.38629 1.38629 1.38629 1.38629 0.03661 4.01877 4.01877 1.46634 0.26236 1.09861 0.40547 45 0.14020 3.39317 2.81030 3.29606 45 - - 1.38629 1.38629 1.38629 1.38629 0.01847 4.00063 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:05:43 2012 NSEQ 3 EFFN 3.000000 CKSUM 1917973089 STATS LOCAL MSV -8.1034 0.72042 STATS LOCAL VITERBI -7.7772 0.72042 STATS LOCAL FORWARD -4.1239 0.72042 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47252 1.25359 1.31506 1.52917 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 0.15719 3.27118 2.73043 3.16274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.43088 1.34923 2.50068 0.56112 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 3.30705 0.14631 3.36166 2.73626 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 3.30705 0.14631 3.36166 2.73626 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:05:08 2012 NSEQ 4 EFFN 3.378906 CKSUM 2825794943 STATS LOCAL MSV -7.6252 0.71932 STATS LOCAL VITERBI -7.7478 0.71932 STATS LOCAL FORWARD -3.8213 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93667 1.28772 1.25559 1.22074 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 0.00000 * 1 2.95993 3.60582 0.11520 3.51237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 2 3.45365 0.12778 3.50223 2.84393 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 3 2.95993 3.60582 0.11520 3.51237 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 4 3.45365 0.12778 3.50223 2.84393 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 5 3.45365 0.12778 3.50223 2.84393 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 6 3.10665 2.60661 3.15411 0.17580 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 7 3.10665 2.60661 3.15411 0.17580 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 8 3.45365 0.12778 3.50223 2.84393 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 9 0.13956 3.39810 2.81350 3.30145 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 10 2.95993 3.60582 0.11520 3.51237 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 11 2.95993 3.60582 0.11520 3.51237 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 12 3.10665 2.60661 3.15411 0.17580 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 13 2.41540 0.95570 2.48737 0.81419 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 14 3.10665 2.60661 3.15411 0.17580 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 15 0.13956 3.39810 2.81350 3.30145 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 16 3.45365 0.12778 3.50223 2.84393 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 17 3.45365 0.12778 3.50223 2.84393 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 18 3.10665 2.60661 3.15411 0.17580 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 19 2.95993 3.60582 0.11520 3.51237 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 20 2.95993 3.60582 0.11520 3.51237 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 21 0.13956 3.39810 2.81350 3.30145 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 22 2.95993 3.60582 0.11520 3.51237 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 23 2.95993 3.60582 0.11520 3.51237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 24 3.45365 0.12778 3.50223 2.84393 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 25 0.13956 3.39810 2.81350 3.30145 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 26 3.45365 0.12778 3.50223 2.84393 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 27 2.95993 3.60582 0.11520 3.51237 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 28 3.10665 2.60661 3.15411 0.17580 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 29 3.10665 2.60661 3.15411 0.17580 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 30 3.10665 2.60661 3.15411 0.17580 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 31 3.45365 0.12778 3.50223 2.84393 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 32 3.10665 2.60661 3.15411 0.17580 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 33 3.45365 0.12778 3.50223 2.84393 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 34 3.10665 2.60661 3.15411 0.17580 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 35 3.45365 0.12778 3.50223 2.84393 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 36 0.13956 3.39810 2.81350 3.30145 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 37 2.95993 3.60582 0.11520 3.51237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 38 3.10665 2.60661 3.15411 0.17580 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 39 2.95993 3.60582 0.11520 3.51237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 40 3.10665 2.60661 3.15411 0.17580 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 41 3.45365 0.12778 3.50223 2.84393 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 42 2.95993 3.60582 0.11520 3.51237 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 43 2.95993 3.60582 0.11520 3.51237 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 44 3.10665 2.60661 3.15411 0.17580 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 45 3.10665 2.60661 3.15411 0.17580 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00349 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_sixtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 13:04:58 2012 NSEQ 3 EFFN 3.000000 CKSUM 3005825472 STATS LOCAL MSV -8.0324 0.72049 STATS LOCAL VITERBI -7.7537 0.72049 STATS LOCAL FORWARD -3.8382 0.72049 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.71460 1.37701 1.32043 1.20194 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:46:47 2012 NSEQ 107 EFFN 5.469513 CKSUM 3702920810 STATS LOCAL MSV -6.9710 0.71932 STATS LOCAL VITERBI -7.6991 0.71932 STATS LOCAL FORWARD -4.0948 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.96459 1.17069 1.18806 1.40721 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 0.00000 * 1 3.27426 4.06740 0.07563 4.02433 1 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 2 3.99023 0.07941 4.01394 3.22430 2 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 3 2.84791 3.94781 0.10280 3.89080 3 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 4 3.99023 0.07941 4.01394 3.22430 4 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 5 3.80539 0.11576 3.83955 2.72476 5 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 6 3.90184 0.09641 3.93063 2.95505 6 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 7 2.36951 3.72816 0.15506 3.64689 7 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 8 2.18561 0.67019 1.37666 2.09103 8 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 9 2.90642 0.48164 2.97253 1.28595 9 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 10 0.41086 3.06468 1.43776 2.94138 10 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 11 3.27426 4.06740 0.07563 4.02433 11 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 12 2.63635 1.45385 2.85884 0.45040 12 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 13 0.09024 3.87871 3.12622 3.82931 13 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 14 3.24015 1.90941 3.28830 0.25443 14 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 15 3.51655 2.57190 3.55012 0.14481 15 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 16 3.99023 0.07941 4.01394 3.22430 16 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 17 2.94055 1.36918 3.00114 0.44143 17 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 18 2.52055 3.80899 0.13517 3.73608 18 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 19 2.19668 1.40915 0.63741 2.15572 19 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 20 3.55650 0.17290 3.60266 2.27313 20 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 21 2.90697 3.96805 0.09819 3.91349 21 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 22 2.79322 3.92785 0.10736 3.86845 22 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 23 3.27426 4.06740 0.07563 4.02433 23 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 24 3.83135 0.11045 3.86411 2.78217 24 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 25 0.10702 3.76582 3.08529 3.42258 25 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 26 3.57586 2.76328 3.60593 0.12583 26 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 27 3.27426 4.06740 0.07563 4.02433 27 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 28 3.99023 0.07941 4.01394 3.22430 28 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 29 3.99023 0.07941 4.01394 3.22430 29 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 30 3.52926 2.61077 3.56209 0.14062 30 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 31 3.01979 4.00315 0.09022 3.95285 31 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 32 3.57586 2.76328 3.60593 0.12583 32 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 33 2.89367 1.28100 2.95598 0.48639 33 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 34 3.80211 0.11644 3.83645 2.71770 34 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 35 3.01692 4.00231 0.09041 3.95191 35 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 36 0.09024 3.87871 3.12622 3.82931 36 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 37 3.27426 4.06740 0.07563 4.02433 37 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 38 3.99023 0.07941 4.01394 3.22430 38 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 39 3.27426 4.06740 0.07563 4.02433 39 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 40 3.62336 2.93877 3.65065 0.11160 40 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 41 3.59049 0.10504 3.84397 2.98140 41 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 42 0.20299 3.01956 2.85242 2.56154 42 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 43 3.37743 2.71282 3.05366 0.15978 43 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 44 3.36967 2.72811 3.02203 0.16069 44 - - 1.38629 1.38629 1.38629 1.38629 0.02642 4.33984 4.33984 1.46634 0.26236 1.09861 0.40547 45 1.65173 2.45270 2.44628 0.45318 45 - - 1.38629 1.38629 1.38629 1.38629 0.01330 4.32671 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:47:49 2012 NSEQ 6 EFFN 3.436523 CKSUM 1296343504 STATS LOCAL MSV -7.3313 0.71932 STATS LOCAL VITERBI -7.8780 0.71932 STATS LOCAL FORWARD -4.0002 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72424 1.37103 1.34814 1.17725 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 0.00000 * 1 2.97231 3.62392 0.11328 3.53237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 2 3.47427 0.12540 3.52197 2.85887 2 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 3 2.97231 3.62392 0.11328 3.53237 3 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 4 3.47427 0.12540 3.52197 2.85887 4 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 5 3.47427 0.12540 3.52197 2.85887 5 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 6 3.47427 0.12540 3.52197 2.85887 6 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 7 0.13726 3.41603 2.82510 3.32110 7 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 8 3.12486 2.61817 3.17162 0.17294 8 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 9 3.12486 2.61817 3.17162 0.17294 9 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 10 0.13726 3.41603 2.82510 3.32110 10 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 11 2.97231 3.62392 0.11328 3.53237 11 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 12 3.12486 2.61817 3.17162 0.17294 12 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 13 0.13726 3.41603 2.82510 3.32110 13 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 14 3.12486 2.61817 3.17162 0.17294 14 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 15 3.12486 2.61817 3.17162 0.17294 15 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 16 3.47427 0.12540 3.52197 2.85887 16 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 17 3.12486 2.61817 3.17162 0.17294 17 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 18 0.13726 3.41603 2.82510 3.32110 18 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 19 2.16537 2.28347 0.67203 1.29942 19 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 20 3.12486 2.61817 3.17162 0.17294 20 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 21 2.97231 3.62392 0.11328 3.53237 21 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 22 2.97231 3.62392 0.11328 3.53237 22 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 23 2.97231 3.62392 0.11328 3.53237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 24 3.47427 0.12540 3.52197 2.85887 24 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 25 0.13726 3.41603 2.82510 3.32110 25 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 26 3.12486 2.61817 3.17162 0.17294 26 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 27 2.97231 3.62392 0.11328 3.53237 27 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 28 3.47427 0.12540 3.52197 2.85887 28 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 29 3.47427 0.12540 3.52197 2.85887 29 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 30 3.12486 2.61817 3.17162 0.17294 30 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 31 2.97231 3.62392 0.11328 3.53237 31 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 32 3.12486 2.61817 3.17162 0.17294 32 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 33 3.12486 2.61817 3.17162 0.17294 33 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 34 3.47427 0.12540 3.52197 2.85887 34 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 35 2.97231 3.62392 0.11328 3.53237 35 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 36 0.13726 3.41603 2.82510 3.32110 36 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 37 2.97231 3.62392 0.11328 3.53237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 38 3.47427 0.12540 3.52197 2.85887 38 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 39 2.97231 3.62392 0.11328 3.53237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 40 3.12486 2.61817 3.17162 0.17294 40 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 41 3.47427 0.12540 3.52197 2.85887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 42 0.13726 3.41603 2.82510 3.32110 42 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 43 3.12486 2.61817 3.17162 0.17294 43 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 44 3.12486 2.61817 3.17162 0.17294 44 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 45 3.12486 2.61817 3.17162 0.17294 45 - - 1.38629 1.38629 1.38629 1.38629 0.01823 4.01395 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:53:25 2012 NSEQ 2 EFFN 2.000000 CKSUM 2677580612 STATS LOCAL MSV -7.5949 0.72867 STATS LOCAL VITERBI -8.2619 0.72867 STATS LOCAL FORWARD -3.4585 0.72867 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45253 1.64256 1.36949 1.14476 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyeighta_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:56:46 2012 NSEQ 68 EFFN 4.262451 CKSUM 3743148177 STATS LOCAL MSV -7.0952 0.71932 STATS LOCAL VITERBI -7.6154 0.71932 STATS LOCAL FORWARD -4.2218 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74392 1.31676 1.19767 1.36544 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 0.00000 * 1 0.11195 3.63913 2.96859 3.56620 1 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 2 3.72789 0.09993 3.76402 3.03945 2 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 3 3.12084 3.84347 0.09261 3.77593 3 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 4 3.72789 0.09993 3.76402 3.03945 4 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 5 3.35808 2.76624 3.39568 0.14066 5 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 6 3.72789 0.09993 3.76402 3.03945 6 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 7 3.72789 0.09993 3.76402 3.03945 7 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 8 2.69244 0.52841 2.76163 1.27455 8 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 9 3.28812 2.56823 3.32899 0.16231 9 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 10 3.12084 3.84347 0.09261 3.77593 10 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 11 3.12084 3.84347 0.09261 3.77593 11 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 12 3.13996 2.21391 3.18787 0.21544 12 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 13 0.11195 3.63913 2.96859 3.56620 13 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 14 3.35808 2.76624 3.39568 0.14066 14 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 15 3.35808 2.76624 3.39568 0.14066 15 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 16 3.62514 0.11947 3.66577 2.80710 16 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 17 3.63143 0.11823 3.67179 2.82018 17 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 18 3.00740 3.59699 0.12731 3.15331 18 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 19 1.12237 2.72393 0.62845 2.58418 19 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 20 2.83544 3.73509 0.11467 3.65848 20 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 21 3.12084 3.84347 0.09261 3.77593 21 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 22 0.11195 3.63913 2.96859 3.56620 22 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 23 3.12084 3.84347 0.09261 3.77593 23 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 24 3.72789 0.09993 3.76402 3.03945 24 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 25 0.11195 3.63913 2.96859 3.56620 25 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 26 2.80234 0.42376 2.86956 1.47830 26 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 27 2.30378 3.45032 0.18240 3.34915 27 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 28 3.63668 0.11719 3.67680 2.83117 28 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 29 3.72789 0.09993 3.76402 3.03945 29 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 30 3.35808 2.76624 3.39568 0.14066 30 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 31 3.12084 3.84347 0.09261 3.77593 31 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 32 3.35808 2.76624 3.39568 0.14066 32 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 33 3.35808 2.76624 3.39568 0.14066 33 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 34 2.58185 0.74573 2.65233 0.96893 34 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 35 3.12084 3.84347 0.09261 3.77593 35 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 36 0.11195 3.63913 2.96859 3.56620 36 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 37 3.12084 3.84347 0.09261 3.77593 37 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 38 3.18860 2.32282 3.23426 0.19676 38 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 39 3.12084 3.84347 0.09261 3.77593 39 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 40 3.35808 2.76624 3.39568 0.14066 40 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 41 3.53123 0.13892 3.57597 2.62487 41 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 42 0.87476 2.51732 0.91467 2.28562 42 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 43 3.23315 2.42844 3.27668 0.18076 43 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 44 2.76473 3.56651 0.13835 3.27126 44 - - 1.38629 1.38629 1.38629 1.38629 0.03144 4.16859 4.16859 1.46634 0.26236 1.09861 0.40547 45 0.12988 3.56731 2.76407 3.48889 45 - - 1.38629 1.38629 1.38629 1.38629 0.01584 4.15300 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyeightb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:56:54 2012 NSEQ 8 EFFN 3.378906 CKSUM 1843230565 STATS LOCAL MSV -7.3773 0.71931 STATS LOCAL VITERBI -7.6045 0.71931 STATS LOCAL FORWARD -4.3772 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.56462 1.52276 1.31393 1.19086 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 0.00000 * 1 0.13956 3.39810 2.81350 3.30145 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 2 3.45365 0.12778 3.50223 2.84393 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 3 2.95993 3.60582 0.11520 3.51237 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 4 3.45365 0.12778 3.50223 2.84393 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 5 3.10665 2.60661 3.15411 0.17580 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 6 3.45365 0.12778 3.50223 2.84393 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 7 3.10665 2.60661 3.15411 0.17580 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 8 3.10665 2.60661 3.15411 0.17580 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 9 3.10665 2.60661 3.15411 0.17580 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 10 2.95993 3.60582 0.11520 3.51237 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 11 2.95993 3.60582 0.11520 3.51237 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 12 3.10665 2.60661 3.15411 0.17580 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 13 0.13956 3.39810 2.81350 3.30145 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 14 3.10665 2.60661 3.15411 0.17580 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 15 3.10665 2.60661 3.15411 0.17580 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 16 3.45365 0.12778 3.50223 2.84393 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 17 3.45365 0.12778 3.50223 2.84393 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 18 2.95993 3.60582 0.11520 3.51237 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 19 0.13956 3.39810 2.81350 3.30145 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 20 0.13956 3.39810 2.81350 3.30145 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 21 2.95993 3.60582 0.11520 3.51237 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 22 0.13956 3.39810 2.81350 3.30145 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 23 2.95993 3.60582 0.11520 3.51237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 24 3.45365 0.12778 3.50223 2.84393 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 25 0.13956 3.39810 2.81350 3.30145 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 26 3.10665 2.60661 3.15411 0.17580 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 27 2.95993 3.60582 0.11520 3.51237 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 28 3.45365 0.12778 3.50223 2.84393 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 29 3.45365 0.12778 3.50223 2.84393 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 30 3.10665 2.60661 3.15411 0.17580 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 31 2.95993 3.60582 0.11520 3.51237 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 32 3.10665 2.60661 3.15411 0.17580 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 33 3.10665 2.60661 3.15411 0.17580 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 34 3.10665 2.60661 3.15411 0.17580 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 35 2.95993 3.60582 0.11520 3.51237 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 36 0.13956 3.39810 2.81350 3.30145 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 37 2.95993 3.60582 0.11520 3.51237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 38 3.10665 2.60661 3.15411 0.17580 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 39 2.95993 3.60582 0.11520 3.51237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 40 3.10665 2.60661 3.15411 0.17580 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 41 3.45365 0.12778 3.50223 2.84393 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 42 0.13956 3.39810 2.81350 3.30145 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 43 3.10665 2.60661 3.15411 0.17580 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 44 2.95993 3.60582 0.11520 3.51237 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 45 0.33107 2.69976 2.46700 2.04189 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00349 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyfivea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:55:18 2012 NSEQ 21 EFFN 3.791382 CKSUM 3821025216 STATS LOCAL MSV -6.9002 0.71932 STATS LOCAL VITERBI -7.6925 0.71932 STATS LOCAL FORWARD -4.2802 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.78024 1.42041 1.17666 1.26769 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 0.00000 * 1 3.04218 3.72681 0.10302 3.64634 1 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 2 3.59240 0.11272 3.63484 2.94361 2 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 3 2.33472 3.36657 0.18602 3.25981 3 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 4 3.59240 0.11272 3.63484 2.94361 4 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 5 3.59240 0.11272 3.63484 2.94361 5 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 6 3.59240 0.11272 3.63484 2.94361 6 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 7 3.23117 2.68559 3.27379 0.15730 7 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 8 2.49098 0.98188 2.56176 0.76487 8 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 9 3.23117 2.68559 3.27379 0.15730 9 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 10 3.04218 3.72681 0.10302 3.64634 10 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 11 3.04218 3.72681 0.10302 3.64634 11 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 12 3.23117 2.68559 3.27379 0.15730 12 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 13 0.12483 3.51924 2.89156 3.43437 13 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 14 3.23117 2.68559 3.27379 0.15730 14 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 15 3.23117 2.68559 3.27379 0.15730 15 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 16 3.59240 0.11272 3.63484 2.94361 16 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 17 3.59240 0.11272 3.63484 2.94361 17 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 18 3.04218 3.72681 0.10302 3.64634 18 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 19 0.80163 2.59293 0.94079 2.45010 19 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 20 0.12483 3.51924 2.89156 3.43437 20 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 21 3.04218 3.72681 0.10302 3.64634 21 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 22 3.04218 3.72681 0.10302 3.64634 22 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 23 3.04218 3.72681 0.10302 3.64634 23 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 24 3.17214 0.21391 3.22953 2.19739 24 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 25 0.12483 3.51924 2.89156 3.43437 25 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 26 2.87950 1.90169 2.93667 0.29911 26 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 27 2.12059 3.22754 0.22833 3.11169 27 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 28 3.59240 0.11272 3.63484 2.94361 28 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 29 3.59240 0.11272 3.63484 2.94361 29 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 30 3.23117 2.68559 3.27379 0.15730 30 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 31 3.04218 3.72681 0.10302 3.64634 31 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 32 3.23117 2.68559 3.27379 0.15730 32 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 33 3.23117 2.68559 3.27379 0.15730 33 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 34 3.23117 2.68559 3.27379 0.15730 34 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 35 3.04218 3.72681 0.10302 3.64634 35 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 36 0.12483 3.51924 2.89156 3.43437 36 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 37 3.04218 3.72681 0.10302 3.64634 37 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 38 3.23117 2.68559 3.27379 0.15730 38 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 39 3.04218 3.72681 0.10302 3.64634 39 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 40 3.23117 2.68559 3.27379 0.15730 40 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 41 3.59240 0.11272 3.63484 2.94361 41 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 42 0.12483 3.51924 2.89156 3.43437 42 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 43 3.23117 2.68559 3.27379 0.15730 43 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 44 3.04218 3.72681 0.10302 3.64634 44 - - 1.38629 1.38629 1.38629 1.38629 0.03395 4.09291 4.09291 1.46634 0.26236 1.09861 0.40547 45 0.25867 2.92988 2.61643 2.28816 45 - - 1.38629 1.38629 1.38629 1.38629 0.01712 4.07608 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyfiveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:55:28 2012 NSEQ 7 EFFN 3.790527 CKSUM 754801534 STATS LOCAL MSV -7.0218 0.71932 STATS LOCAL VITERBI -7.6312 0.71932 STATS LOCAL FORWARD -4.4210 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62204 1.50143 1.29548 1.18441 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 0.00000 * 1 3.04202 3.72657 0.10304 3.64608 1 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 2 3.59213 0.11274 3.63458 2.94342 2 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 3 0.12486 3.51901 2.89141 3.43411 3 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 4 3.59213 0.11274 3.63458 2.94342 4 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 5 3.59213 0.11274 3.63458 2.94342 5 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 6 3.59213 0.11274 3.63458 2.94342 6 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 7 3.23093 2.68543 3.27356 0.15734 7 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 8 3.23093 2.68543 3.27356 0.15734 8 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 9 3.23093 2.68543 3.27356 0.15734 9 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 10 3.04202 3.72657 0.10304 3.64608 10 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 11 3.04202 3.72657 0.10304 3.64608 11 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 12 2.65666 1.47373 2.72170 0.45415 12 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 13 0.12486 3.51901 2.89141 3.43411 13 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 14 3.23093 2.68543 3.27356 0.15734 14 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 15 3.23093 2.68543 3.27356 0.15734 15 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 16 3.59213 0.11274 3.63458 2.94342 16 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 17 3.59213 0.11274 3.63458 2.94342 17 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 18 1.53840 2.84493 0.41462 2.70981 18 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 19 0.12486 3.51901 2.89141 3.43411 19 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 20 0.12486 3.51901 2.89141 3.43411 20 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 21 3.04202 3.72657 0.10304 3.64608 21 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 22 3.04202 3.72657 0.10304 3.64608 22 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 23 3.04202 3.72657 0.10304 3.64608 23 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 24 3.23093 2.68543 3.27356 0.15734 24 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 25 0.12486 3.51901 2.89141 3.43411 25 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 26 3.23093 2.68543 3.27356 0.15734 26 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 27 3.04202 3.72657 0.10304 3.64608 27 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 28 3.59213 0.11274 3.63458 2.94342 28 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 29 3.59213 0.11274 3.63458 2.94342 29 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 30 3.23093 2.68543 3.27356 0.15734 30 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 31 3.04202 3.72657 0.10304 3.64608 31 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 32 3.23093 2.68543 3.27356 0.15734 32 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 33 3.23093 2.68543 3.27356 0.15734 33 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 34 3.23093 2.68543 3.27356 0.15734 34 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 35 3.04202 3.72657 0.10304 3.64608 35 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 36 0.12486 3.51901 2.89141 3.43411 36 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 37 3.04202 3.72657 0.10304 3.64608 37 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 38 3.23093 2.68543 3.27356 0.15734 38 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 39 1.03179 2.61695 0.72078 2.47415 39 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 40 3.23093 2.68543 3.27356 0.15734 40 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 41 3.59213 0.11274 3.63458 2.94342 41 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 42 0.56349 2.38971 2.30337 1.43044 42 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 43 3.23093 2.68543 3.27356 0.15734 43 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 44 3.04202 3.72657 0.10304 3.64608 44 - - 1.38629 1.38629 1.38629 1.38629 0.03396 4.09276 4.09276 1.46634 0.26236 1.09861 0.40547 45 0.12486 3.51901 2.89141 3.43411 45 - - 1.38629 1.38629 1.38629 1.38629 0.01712 4.07593 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyfivec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:55:34 2012 NSEQ 2 EFFN 2.000000 CKSUM 1704710249 STATS LOCAL MSV -7.3363 0.72800 STATS LOCAL VITERBI -8.2242 0.72800 STATS LOCAL FORWARD -3.5530 0.72800 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66396 1.33666 1.26647 1.32401 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.81865 0.23582 2.88868 2.35662 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyfived_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:55:40 2012 NSEQ 110 EFFN 6.764221 CKSUM 1981618649 STATS LOCAL MSV -6.9716 0.71932 STATS LOCAL VITERBI -7.5695 0.71932 STATS LOCAL FORWARD -4.4100 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.84900 1.43502 1.19807 1.19495 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 0.00000 * 1 3.39538 4.23343 0.06500 4.20623 1 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 2 4.08480 0.08881 4.10667 2.96253 2 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 3 2.40193 3.46095 0.15875 3.69508 3 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 4 4.18305 0.06704 4.19835 3.36476 4 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 5 2.95261 0.85562 3.01756 0.74685 5 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 6 3.69215 0.18213 3.73568 2.13932 6 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 7 2.40789 1.30046 1.71361 0.78225 7 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 8 2.46629 1.01170 2.75821 0.71724 8 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 9 3.71365 2.55209 3.74161 0.13470 9 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 10 3.05401 4.17442 0.08174 4.13917 10 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 11 3.39538 4.23343 0.06500 4.20623 11 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 12 3.69066 2.47453 3.72010 0.14317 12 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 13 0.07628 4.06423 3.25686 4.03114 13 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 14 3.75561 2.70729 3.78082 0.11981 14 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 15 3.72623 2.59666 3.75338 0.13016 15 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 16 4.18305 0.06704 4.19835 3.36476 16 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 17 3.96381 0.11560 3.99323 2.63469 17 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 18 3.06377 4.17648 0.08117 4.14153 18 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 19 0.62591 3.05731 1.00865 2.92803 19 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 20 0.85700 1.75114 1.19938 2.29651 20 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 21 3.07763 4.17938 0.08037 4.14484 21 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 22 0.75860 3.02601 0.84899 2.89453 22 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 23 3.06377 4.17648 0.08117 4.14153 23 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 24 3.86707 0.13787 3.90195 2.43426 24 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 25 0.07628 4.06423 3.25686 4.03114 25 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 26 3.75147 2.69109 3.77695 0.12124 26 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 27 3.39538 4.23343 0.06500 4.20623 27 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 28 3.69252 0.18203 3.73604 2.13990 28 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 29 4.18305 0.06704 4.19835 3.36476 29 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 30 3.79015 2.85117 3.81304 0.10809 30 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 31 3.39538 4.23343 0.06500 4.20623 31 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 32 3.83882 3.08703 3.85842 0.09240 32 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 33 3.83882 3.08703 3.85842 0.09240 33 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 34 3.83882 3.08703 3.85842 0.09240 34 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 35 3.36455 3.75967 0.07712 4.11318 35 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 36 0.07628 4.06423 3.25686 4.03114 36 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 37 3.39538 4.23343 0.06500 4.20623 37 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 38 3.07105 2.54345 3.53138 0.16751 38 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 39 3.16523 3.48098 0.09597 3.98832 39 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 40 3.72814 2.60356 3.75516 0.12948 40 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 41 4.12618 0.07970 4.14529 3.10947 41 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 42 0.31693 3.07546 2.01098 2.39039 42 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 43 3.63765 2.86603 3.24732 0.13024 43 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 44 2.43294 2.32232 0.94151 0.85770 44 - - 1.38629 1.38629 1.38629 1.38629 0.02256 4.49583 4.49583 1.46634 0.26236 1.09861 0.40547 45 0.44786 2.46019 1.97075 1.99337 45 - - 1.38629 1.38629 1.38629 1.38629 0.01135 4.48461 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:55:05 2012 NSEQ 14 EFFN 3.674316 CKSUM 4026790460 STATS LOCAL MSV -7.4351 0.71933 STATS LOCAL VITERBI -7.6455 0.71933 STATS LOCAL FORWARD -4.2563 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.85672 1.35730 1.23154 1.22207 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 0.00000 * 1 3.02027 3.69442 0.10613 3.61043 1 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 2 3.55507 0.11656 3.59920 2.91697 2 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 3 3.02027 3.69442 0.10613 3.61043 3 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 4 3.55507 0.11656 3.59920 2.91697 4 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 5 2.83767 1.87380 2.89604 0.31108 5 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 6 3.55507 0.11656 3.59920 2.91697 6 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 7 3.55507 0.11656 3.59920 2.91697 7 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 8 1.40213 2.22571 2.32864 0.60055 8 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 9 3.00169 2.20197 3.05363 0.23253 9 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 10 3.02027 3.69442 0.10613 3.61043 10 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 11 3.02027 3.69442 0.10613 3.61043 11 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 12 3.19718 2.66404 3.24113 0.16212 12 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 13 0.12863 3.48651 2.87054 3.39842 13 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 14 3.19718 2.66404 3.24113 0.16212 14 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 15 3.19718 2.66404 3.24113 0.16212 15 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 16 3.55507 0.11656 3.59920 2.91697 16 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 17 3.55507 0.11656 3.59920 2.91697 17 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 18 0.45681 2.74344 1.47534 2.60848 18 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 19 3.19718 2.66404 3.24113 0.16212 19 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 20 3.02027 3.69442 0.10613 3.61043 20 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 21 3.02027 3.69442 0.10613 3.61043 21 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 22 0.26587 3.05720 2.01313 2.93987 22 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 23 3.02027 3.69442 0.10613 3.61043 23 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 24 3.55507 0.11656 3.59920 2.91697 24 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 25 0.12863 3.48651 2.87054 3.39842 25 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 26 3.00540 2.20984 3.05718 0.23100 26 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 27 3.02027 3.69442 0.10613 3.61043 27 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 28 3.55507 0.11656 3.59920 2.91697 28 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 29 3.55507 0.11656 3.59920 2.91697 29 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 30 3.19718 2.66404 3.24113 0.16212 30 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 31 3.02027 3.69442 0.10613 3.61043 31 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 32 3.19718 2.66404 3.24113 0.16212 32 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 33 3.19718 2.66404 3.24113 0.16212 33 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 34 3.19718 2.66404 3.24113 0.16212 34 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 35 3.02027 3.69442 0.10613 3.61043 35 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 36 0.12863 3.48651 2.87054 3.39842 36 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 37 3.02027 3.69442 0.10613 3.61043 37 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 38 3.19718 2.66404 3.24113 0.16212 38 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 39 3.02027 3.69442 0.10613 3.61043 39 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 40 3.19718 2.66404 3.24113 0.16212 40 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 41 3.55507 0.11656 3.59920 2.91697 41 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 42 0.12863 3.48651 2.87054 3.39842 42 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 43 3.55507 0.11656 3.59920 2.91697 43 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 44 3.02027 3.69442 0.10613 3.61043 44 - - 1.38629 1.38629 1.38629 1.38629 0.03464 4.07317 4.07317 1.46634 0.26236 1.09861 0.40547 45 3.19718 2.66404 3.24113 0.16212 45 - - 1.38629 1.38629 1.38629 1.38629 0.01747 4.05601 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyninea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:08 2012 NSEQ 19 EFFN 3.465088 CKSUM 264407544 STATS LOCAL MSV -7.2989 0.71933 STATS LOCAL VITERBI -7.6666 0.71933 STATS LOCAL FORWARD -4.3058 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.64354 1.34640 1.31031 1.28449 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 0.00000 * 1 3.48434 0.12426 3.53160 2.86615 1 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 2 2.97834 3.63274 0.11235 3.54213 2 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 3 3.48434 0.12426 3.53160 2.86615 3 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 4 3.48434 0.12426 3.53160 2.86615 4 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 5 3.48434 0.12426 3.53160 2.86615 5 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 6 2.85357 2.00168 2.91071 0.28393 6 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 7 3.13378 2.62384 3.18020 0.17156 7 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 8 3.13378 2.62384 3.18020 0.17156 8 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 9 2.97834 3.63274 0.11235 3.54213 9 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 10 2.97834 3.63274 0.11235 3.54213 10 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 11 3.48434 0.12426 3.53160 2.86615 11 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 12 2.42998 0.91705 2.50191 0.84319 12 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 13 0.13615 3.42479 2.83077 3.33071 13 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 14 3.13378 2.62384 3.18020 0.17156 14 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 15 3.13378 2.62384 3.18020 0.17156 15 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 16 3.48434 0.12426 3.53160 2.86615 16 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 17 3.48434 0.12426 3.53160 2.86615 17 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 18 2.97834 3.63274 0.11235 3.54213 18 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 19 0.13615 3.42479 2.83077 3.33071 19 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 20 0.23841 3.09191 2.15619 2.97707 20 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 21 2.97834 3.63274 0.11235 3.54213 21 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 22 2.97834 3.63274 0.11235 3.54213 22 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 23 2.97834 3.63274 0.11235 3.54213 23 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 24 3.48434 0.12426 3.53160 2.86615 24 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 25 0.13615 3.42479 2.83077 3.33071 25 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 26 3.13378 2.62384 3.18020 0.17156 26 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 27 2.97834 3.63274 0.11235 3.54213 27 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 28 3.48434 0.12426 3.53160 2.86615 28 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 29 3.48434 0.12426 3.53160 2.86615 29 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 30 3.13378 2.62384 3.18020 0.17156 30 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 31 2.97834 3.63274 0.11235 3.54213 31 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 32 3.13378 2.62384 3.18020 0.17156 32 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 33 3.13378 2.62384 3.18020 0.17156 33 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 34 3.13378 2.62384 3.18020 0.17156 34 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 35 2.97834 3.63274 0.11235 3.54213 35 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 36 0.13615 3.42479 2.83077 3.33071 36 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 37 2.97834 3.63274 0.11235 3.54213 37 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 38 3.13378 2.62384 3.18020 0.17156 38 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 39 0.13615 3.42479 2.83077 3.33071 39 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 40 3.13378 2.62384 3.18020 0.17156 40 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 41 3.48434 0.12426 3.53160 2.86615 41 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 42 0.13615 3.42479 2.83077 3.33071 42 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 43 3.13378 2.62384 3.18020 0.17156 43 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 44 2.97834 3.63274 0.11235 3.54213 44 - - 1.38629 1.38629 1.38629 1.38629 0.03594 4.03691 4.03691 1.46634 0.26236 1.09861 0.40547 45 0.13615 3.42479 2.83077 3.33071 45 - - 1.38629 1.38629 1.38629 1.38629 0.01813 4.01910 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtynineb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:19 2012 NSEQ 5 EFFN 3.422852 CKSUM 1805487762 STATS LOCAL MSV -7.4783 0.71932 STATS LOCAL VITERBI -7.7773 0.71932 STATS LOCAL FORWARD -4.3698 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.67734 1.37211 1.36623 1.18911 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 0.00000 * 1 3.46942 0.12596 3.51732 2.85535 1 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 2 2.96940 3.61966 0.11373 3.52767 2 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 3 3.46942 0.12596 3.51732 2.85535 3 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 4 3.12056 2.61545 3.16749 0.17361 4 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 5 3.46942 0.12596 3.51732 2.85535 5 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 6 3.12056 2.61545 3.16749 0.17361 6 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 7 3.12056 2.61545 3.16749 0.17361 7 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 8 3.12056 2.61545 3.16749 0.17361 8 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 9 2.96940 3.61966 0.11373 3.52767 9 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 10 2.96940 3.61966 0.11373 3.52767 10 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 11 3.46942 0.12596 3.51732 2.85535 11 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 12 3.46942 0.12596 3.51732 2.85535 12 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 13 0.13780 3.41180 2.82237 3.31647 13 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 14 3.12056 2.61545 3.16749 0.17361 14 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 15 3.12056 2.61545 3.16749 0.17361 15 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 16 3.46942 0.12596 3.51732 2.85535 16 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 17 3.46942 0.12596 3.51732 2.85535 17 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 18 0.63322 2.57555 1.18661 2.43321 18 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 19 0.13780 3.41180 2.82237 3.31647 19 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 20 0.13780 3.41180 2.82237 3.31647 20 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 21 2.96940 3.61966 0.11373 3.52767 21 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 22 0.13780 3.41180 2.82237 3.31647 22 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 23 2.96940 3.61966 0.11373 3.52767 23 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 24 3.46942 0.12596 3.51732 2.85535 24 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 25 0.13780 3.41180 2.82237 3.31647 25 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 26 3.12056 2.61545 3.16749 0.17361 26 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 27 2.96940 3.61966 0.11373 3.52767 27 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 28 3.46942 0.12596 3.51732 2.85535 28 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 29 3.46942 0.12596 3.51732 2.85535 29 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 30 3.12056 2.61545 3.16749 0.17361 30 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 31 2.96940 3.61966 0.11373 3.52767 31 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 32 3.12056 2.61545 3.16749 0.17361 32 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 33 3.12056 2.61545 3.16749 0.17361 33 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 34 3.12056 2.61545 3.16749 0.17361 34 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 35 2.96940 3.61966 0.11373 3.52767 35 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 36 0.13780 3.41180 2.82237 3.31647 36 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 37 2.96940 3.61966 0.11373 3.52767 37 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 38 3.12056 2.61545 3.16749 0.17361 38 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 39 2.96940 3.61966 0.11373 3.52767 39 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 40 3.12056 2.61545 3.16749 0.17361 40 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 41 3.46942 0.12596 3.51732 2.85535 41 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 42 0.13780 3.41180 2.82237 3.31647 42 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 43 3.12056 2.61545 3.16749 0.17361 43 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 44 3.12056 2.61545 3.16749 0.17361 44 - - 1.38629 1.38629 1.38629 1.38629 0.03622 4.02942 4.02942 1.46634 0.26236 1.09861 0.40547 45 2.96940 3.61966 0.11373 3.52767 45 - - 1.38629 1.38629 1.38629 1.38629 0.01827 4.01148 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyninec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:57:25 2012 NSEQ 2 EFFN 2.000000 CKSUM 1983370454 STATS LOCAL MSV -7.5108 0.72845 STATS LOCAL VITERBI -8.3051 0.72845 STATS LOCAL FORWARD -3.5039 0.72845 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58494 1.50446 1.31973 1.18517 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyonea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:53:36 2012 NSEQ 7 EFFN 3.339355 CKSUM 1527527692 STATS LOCAL MSV -8.2684 0.71933 STATS LOCAL VITERBI -7.6857 0.71933 STATS LOCAL FORWARD -4.0354 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81911 1.43203 1.13792 1.27827 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 0.00000 * 1 2.95124 3.59315 0.11657 3.49839 1 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 2 3.43924 0.12948 3.48844 2.83346 2 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 3 2.95124 3.59315 0.11657 3.49839 3 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 4 3.43924 0.12948 3.48844 2.83346 4 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 5 3.09399 2.59856 3.14194 0.17781 5 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 6 3.43924 0.12948 3.48844 2.83346 6 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 7 3.43924 0.12948 3.48844 2.83346 7 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 8 3.09399 2.59856 3.14194 0.17781 8 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 9 3.09399 2.59856 3.14194 0.17781 9 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 10 2.95124 3.59315 0.11657 3.49839 10 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 11 2.95124 3.59315 0.11657 3.49839 11 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 12 3.09399 2.59856 3.14194 0.17781 12 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 13 0.14119 3.38559 2.80538 3.28775 13 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 14 3.09399 2.59856 3.14194 0.17781 14 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 15 3.09399 2.59856 3.14194 0.17781 15 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 16 3.43924 0.12948 3.48844 2.83346 16 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 17 3.43924 0.12948 3.48844 2.83346 17 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 18 2.95124 3.59315 0.11657 3.49839 18 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 19 0.14119 3.38559 2.80538 3.28775 19 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 20 2.95124 3.59315 0.11657 3.49839 20 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 21 2.95124 3.59315 0.11657 3.49839 21 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 22 0.14119 3.38559 2.80538 3.28775 22 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 23 2.95124 3.59315 0.11657 3.49839 23 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 24 3.43924 0.12948 3.48844 2.83346 24 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 25 0.14119 3.38559 2.80538 3.28775 25 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 26 3.09399 2.59856 3.14194 0.17781 26 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 27 2.95124 3.59315 0.11657 3.49839 27 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 28 3.43924 0.12948 3.48844 2.83346 28 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 29 3.43924 0.12948 3.48844 2.83346 29 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 30 3.09399 2.59856 3.14194 0.17781 30 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 31 2.95124 3.59315 0.11657 3.49839 31 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 32 3.09399 2.59856 3.14194 0.17781 32 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 33 3.09399 2.59856 3.14194 0.17781 33 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 34 3.09399 2.59856 3.14194 0.17781 34 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 35 2.95124 3.59315 0.11657 3.49839 35 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 36 0.14119 3.38559 2.80538 3.28775 36 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 37 2.95124 3.59315 0.11657 3.49839 37 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 38 2.43091 1.12142 2.50188 0.68459 38 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 39 2.95124 3.59315 0.11657 3.49839 39 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 40 3.09399 2.59856 3.14194 0.17781 40 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 41 3.43924 0.12948 3.48844 2.83346 41 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 42 2.95124 3.59315 0.11657 3.49839 42 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 43 3.09399 2.59856 3.14194 0.17781 43 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 44 2.95124 3.59315 0.11657 3.49839 44 - - 1.38629 1.38629 1.38629 1.38629 0.03677 4.01446 4.01446 1.46634 0.26236 1.09861 0.40547 45 0.14119 3.38559 2.80538 3.28775 45 - - 1.38629 1.38629 1.38629 1.38629 0.01856 3.99625 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyoneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:54:01 2012 NSEQ 831 EFFN 4.384129 CKSUM 3394769104 STATS LOCAL MSV -7.4985 0.71932 STATS LOCAL VITERBI -7.6585 0.71932 STATS LOCAL FORWARD -4.1886 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.79128 1.43153 1.21796 1.20906 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 0.00000 * 1 3.13904 3.87045 0.09038 3.80592 1 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 2 3.75608 0.09779 3.79086 3.05308 2 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 3 2.72620 3.70942 0.12383 3.63037 3 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 4 3.75939 0.09719 3.79403 3.06160 4 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 5 3.06989 2.01298 3.12140 0.25375 5 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 6 3.58135 0.13191 3.62407 2.67267 6 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 7 3.10440 0.16267 3.40840 2.62855 7 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 8 3.25839 2.42797 3.30114 0.17854 8 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 9 3.33177 2.61945 3.37088 0.15424 9 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 10 3.00040 3.82338 0.09984 3.75507 10 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 11 3.13904 3.87045 0.09038 3.80592 11 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 12 3.07664 2.47074 3.24129 0.18603 12 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 13 0.12364 3.57253 2.95000 3.32761 13 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 14 3.10851 2.60497 3.28751 0.16951 14 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 15 3.35477 2.68459 3.39276 0.14709 15 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 16 3.75939 0.09719 3.79403 3.06160 16 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 17 3.51541 0.14626 3.56098 2.55202 17 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 18 2.88519 3.68950 0.11947 3.44891 18 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 19 0.13245 3.57492 2.72183 3.49718 19 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 20 2.83309 3.55397 0.13948 3.15252 20 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 21 2.93763 3.79982 0.10467 3.72936 21 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 22 0.20844 3.32059 2.18860 3.22022 22 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 23 3.13904 3.87045 0.09038 3.80592 23 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 24 3.54916 0.13880 3.59329 2.61267 24 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 25 0.11726 3.63430 2.88505 3.56177 25 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 26 3.32391 2.59783 3.36342 0.15673 26 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 27 3.02164 3.83104 0.09829 3.76340 27 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 28 3.69439 0.10930 3.73196 2.90532 28 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 29 3.68441 0.11121 3.72244 2.88307 29 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 30 3.31159 2.56450 3.35171 0.16069 30 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 31 3.13904 3.87045 0.09038 3.80592 31 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 32 3.38846 2.78567 3.42487 0.13697 32 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 33 3.35464 2.68420 3.39263 0.14713 33 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 34 3.31676 2.57839 3.35662 0.15902 34 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 35 3.13904 3.87045 0.09038 3.80592 35 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 36 0.12068 3.62063 2.84545 3.54697 36 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 37 3.13904 3.87045 0.09038 3.80592 37 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 38 3.03377 2.59614 3.15605 0.18067 38 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 39 2.87363 3.54328 0.11920 3.61347 39 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 40 3.34897 2.66790 3.38724 0.14887 40 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 41 3.70404 0.10747 3.74116 2.92722 41 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 42 0.24375 3.03868 2.51880 2.43202 42 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 43 3.08194 2.54512 2.79831 0.20487 43 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 44 1.99202 2.02064 1.07213 0.94487 44 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.18725 4.18725 1.46634 0.26236 1.09861 0.40547 45 0.65872 2.19971 1.83802 1.54872 45 - - 1.38629 1.38629 1.38629 1.38629 0.01554 4.17194 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:56:32 2012 NSEQ 5 EFFN 3.276367 CKSUM 3808487661 STATS LOCAL MSV -7.9182 0.71931 STATS LOCAL VITERBI -7.8705 0.71931 STATS LOCAL FORWARD -4.3289 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63517 1.38057 1.31765 1.25218 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 0.00000 * 1 2.93708 3.57257 0.11883 3.47567 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 2 3.41588 0.13228 3.46607 2.81644 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 3 0.14388 3.36532 2.79221 3.26557 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 4 3.41588 0.13228 3.46607 2.81644 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 5 3.41588 0.13228 3.46607 2.81644 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 6 3.41588 0.13228 3.46607 2.81644 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 7 3.07355 2.58556 3.12228 0.18112 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 8 3.07355 2.58556 3.12228 0.18112 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 9 3.07355 2.58556 3.12228 0.18112 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 10 2.93708 3.57257 0.11883 3.47567 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 11 2.93708 3.57257 0.11883 3.47567 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 12 3.07355 2.58556 3.12228 0.18112 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 13 0.14388 3.36532 2.79221 3.26557 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 14 3.07355 2.58556 3.12228 0.18112 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 15 3.07355 2.58556 3.12228 0.18112 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 16 3.41588 0.13228 3.46607 2.81644 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 17 3.41588 0.13228 3.46607 2.81644 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 18 2.93708 3.57257 0.11883 3.47567 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 19 0.14388 3.36532 2.79221 3.26557 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 20 0.14388 3.36532 2.79221 3.26557 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 21 2.93708 3.57257 0.11883 3.47567 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 22 2.93708 3.57257 0.11883 3.47567 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 23 2.93708 3.57257 0.11883 3.47567 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 24 3.07355 2.58556 3.12228 0.18112 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 25 0.14388 3.36532 2.79221 3.26557 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 26 3.41588 0.13228 3.46607 2.81644 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 27 0.14388 3.36532 2.79221 3.26557 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 28 3.41588 0.13228 3.46607 2.81644 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 29 3.41588 0.13228 3.46607 2.81644 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 30 3.41588 0.13228 3.46607 2.81644 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 31 2.93708 3.57257 0.11883 3.47567 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 32 3.07355 2.58556 3.12228 0.18112 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 33 3.07355 2.58556 3.12228 0.18112 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 34 3.07355 2.58556 3.12228 0.18112 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 35 2.93708 3.57257 0.11883 3.47567 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 36 0.14388 3.36532 2.79221 3.26557 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 37 2.93708 3.57257 0.11883 3.47567 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 38 3.07355 2.58556 3.12228 0.18112 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 39 2.93708 3.57257 0.11883 3.47567 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 40 3.07355 2.58556 3.12228 0.18112 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 41 3.41588 0.13228 3.46607 2.81644 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 42 0.14388 3.36532 2.79221 3.26557 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 43 3.07355 2.58556 3.12228 0.18112 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 44 3.07355 2.58556 3.12228 0.18112 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 45 2.93708 3.57257 0.11883 3.47567 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98460 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:56:23 2012 NSEQ 119 EFFN 4.085541 CKSUM 3029002216 STATS LOCAL MSV -7.3915 0.71932 STATS LOCAL VITERBI -7.6471 0.71932 STATS LOCAL FORWARD -4.1604 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.83523 1.25603 1.14185 1.44217 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 0.00000 * 1 3.09292 3.80205 0.09617 3.72990 1 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 2 3.55029 0.12952 3.59406 2.72904 2 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 3 2.49301 3.52644 0.15596 3.43158 3 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 4 3.67962 0.10429 3.71803 3.00543 4 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 5 3.30686 0.18723 3.36009 2.30878 5 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 6 3.44031 0.15360 3.48856 2.52843 6 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 7 3.18673 0.15924 3.40752 2.62031 7 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 8 3.26596 2.60758 3.30740 0.16074 8 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 9 3.26029 2.59248 3.30200 0.16254 9 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 10 3.09292 3.80205 0.09617 3.72990 10 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 11 3.09292 3.80205 0.09617 3.72990 11 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 12 2.32752 0.83355 2.48769 0.95488 12 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 13 0.16140 3.33666 2.83269 2.90707 13 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 14 3.23583 2.52879 3.27866 0.17051 14 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 15 3.31220 2.73702 3.35162 0.14645 15 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 16 3.67962 0.10429 3.71803 3.00543 16 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 17 3.44788 0.15185 3.49583 2.54155 17 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 18 3.09292 3.80205 0.09617 3.72990 18 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 19 0.11639 3.59620 2.94097 3.51897 19 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 20 2.51948 3.21356 0.18381 3.05351 20 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 21 2.75101 3.66165 0.12497 3.57827 21 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 22 2.65810 3.61586 0.13505 3.52851 22 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 23 3.09292 3.80205 0.09617 3.72990 23 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 24 3.18752 0.22277 3.24472 2.12486 24 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 25 0.14303 3.49130 2.66434 3.40627 25 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 26 3.25424 0.20216 3.30927 2.22668 26 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 27 0.24323 3.17819 2.05778 3.06800 27 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 28 3.67962 0.10429 3.71803 3.00543 28 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 29 3.54424 0.13078 3.58827 2.71736 29 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 30 3.16047 0.23173 3.21851 2.08409 30 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 31 3.09292 3.80205 0.09617 3.72990 31 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 32 3.31220 2.73702 3.35162 0.14645 32 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 33 3.26199 2.59698 3.30362 0.16200 33 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 34 3.31220 2.73702 3.35162 0.14645 34 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 35 3.03589 3.46172 0.11323 3.58826 35 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 36 0.11639 3.59620 2.94097 3.51897 36 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 37 3.09292 3.80205 0.09617 3.72990 37 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 38 3.20647 2.45543 3.25067 0.18041 38 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 39 3.09292 3.80205 0.09617 3.72990 39 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 40 3.31220 2.73702 3.35162 0.14645 40 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 41 3.58926 0.12162 3.63139 2.80650 41 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 42 2.34091 3.06612 0.24460 2.60182 42 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 43 3.21073 2.46588 3.25473 0.17895 43 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 44 3.09292 3.80205 0.09617 3.72990 44 - - 1.38629 1.38629 1.38629 1.38629 0.03234 4.14084 4.14084 1.46634 0.26236 1.09861 0.40547 45 0.14122 3.49810 2.68057 3.41365 45 - - 1.38629 1.38629 1.38629 1.38629 0.01630 4.12480 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:54:55 2012 NSEQ 351 EFFN 6.488594 CKSUM 2394442090 STATS LOCAL MSV -6.8045 0.71932 STATS LOCAL VITERBI -7.5336 0.71932 STATS LOCAL FORWARD -4.3163 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.79997 1.44305 1.24296 1.17131 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 0.00000 * 1 3.37204 4.20245 0.06688 4.17254 1 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 2 4.14739 0.06919 4.16415 3.33818 2 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 3 1.73548 3.47373 0.27685 3.36634 3 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 4 4.14739 0.06919 4.16415 3.33818 4 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 5 2.93933 0.64077 3.00533 0.99238 5 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 6 3.91225 0.11989 3.94372 2.60897 6 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 7 2.73332 0.88786 2.66507 0.78995 7 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 8 2.61985 2.09287 2.89130 0.28989 8 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 9 3.60945 2.62100 3.44260 0.14131 9 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 10 3.19289 4.17196 0.07518 4.13819 10 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 11 3.37204 4.20245 0.06688 4.17254 11 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 12 3.69497 2.62703 3.72270 0.12932 12 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 13 0.10013 3.71230 3.09648 3.66317 13 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 14 3.42667 2.69150 3.66036 0.13467 14 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 15 3.76325 2.89684 3.78650 0.10656 15 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 16 4.10951 0.07732 4.12873 3.17276 16 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 17 4.01844 0.09675 4.04355 2.86992 17 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 18 2.35232 3.03449 0.31028 2.09146 18 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 19 0.55780 2.25487 1.88832 1.76421 19 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 20 0.83926 2.59787 0.88257 2.52795 20 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 21 2.74403 4.05740 0.10511 4.00792 21 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 22 1.10415 3.06246 0.56484 2.93212 22 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 23 3.37204 4.20245 0.06688 4.17254 23 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 24 3.26905 0.32275 3.32761 1.59986 24 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 25 0.08758 4.00007 3.06866 3.96056 25 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 26 3.61992 2.38400 3.65237 0.15653 26 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 27 2.96006 4.12059 0.08879 4.07972 27 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 28 4.08590 0.08236 4.10667 3.08378 28 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 29 3.94741 0.11213 3.97683 2.68794 29 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 30 3.46769 1.99795 3.50882 0.21907 30 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 31 3.19569 4.17249 0.07504 4.13879 31 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 32 3.69591 3.02638 3.41891 0.11212 32 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 33 3.79096 3.05588 3.78857 0.09682 33 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 34 3.79756 3.05786 3.81856 0.09582 34 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 35 3.37204 4.20245 0.06688 4.17254 35 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 36 0.07875 4.02918 3.23135 3.99323 36 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 37 3.17301 4.16814 0.07621 4.13385 37 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 38 3.47880 2.84248 3.70702 0.12067 38 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 39 2.35390 3.89109 0.14771 3.82121 39 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 40 3.79756 3.05786 3.81856 0.09582 40 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 41 4.10520 0.07824 4.12471 3.15582 41 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 42 0.09201 3.98554 2.99665 3.94412 42 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 43 3.52520 2.96835 2.92856 0.14423 43 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 44 2.45303 2.43349 1.48021 0.51308 44 - - 1.38629 1.38629 1.38629 1.38629 0.02329 4.46460 4.46460 1.46634 0.26236 1.09861 0.40547 45 0.29737 3.04490 1.94615 2.70599 45 - - 1.38629 1.38629 1.38629 1.38629 0.01171 4.45302 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:54:42 2012 NSEQ 42 EFFN 4.211792 CKSUM 2180024549 STATS LOCAL MSV -6.8332 0.71933 STATS LOCAL VITERBI -7.6892 0.71933 STATS LOCAL FORWARD -4.3003 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.86084 1.32950 1.13517 1.35294 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 0.00000 * 1 3.11302 3.83189 0.09359 3.76305 1 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 2 3.71437 0.10113 3.75114 3.02993 2 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 3 1.59518 2.96179 0.37620 2.83131 3 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 4 3.71437 0.10113 3.75114 3.02993 4 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 5 3.71437 0.10113 3.75114 3.02993 5 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 6 3.09235 0.26311 3.15254 1.94349 6 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 7 3.04877 0.28077 3.11017 1.87869 7 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 8 3.17063 2.30661 3.21694 0.20047 8 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 9 3.20228 2.38008 3.24710 0.18886 9 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 10 3.11302 3.83189 0.09359 3.76305 10 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 11 3.11302 3.83189 0.09359 3.76305 11 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 12 2.94847 1.85129 3.00437 0.29979 12 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 13 0.11318 3.62708 2.96083 3.55294 13 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 14 3.34515 2.75800 3.38327 0.14227 14 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 15 3.34515 2.75800 3.38327 0.14227 15 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 16 3.71437 0.10113 3.75114 3.02993 16 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 17 3.71437 0.10113 3.75114 3.02993 17 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 18 3.11302 3.83189 0.09359 3.76305 18 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 19 0.14112 3.51714 2.66380 3.43433 19 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 20 1.92172 3.18248 0.26731 3.06341 20 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 21 3.11302 3.83189 0.09359 3.76305 21 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 22 3.11302 3.83189 0.09359 3.76305 22 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 23 3.11302 3.83189 0.09359 3.76305 23 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 24 2.77359 0.44087 2.84133 1.44504 24 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 25 0.11318 3.62708 2.96083 3.55294 25 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 26 3.71437 0.10113 3.75114 3.02993 26 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 27 1.03660 2.68825 0.69502 2.54748 27 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 28 3.71437 0.10113 3.75114 3.02993 28 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 29 3.71437 0.10113 3.75114 3.02993 29 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 30 3.09435 2.14011 3.14413 0.23074 30 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 31 3.11302 3.83189 0.09359 3.76305 31 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 32 3.34515 2.75800 3.38327 0.14227 32 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 33 3.20342 2.38279 3.24819 0.18845 33 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 34 3.20576 2.38835 3.25042 0.18762 34 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 35 3.11302 3.83189 0.09359 3.76305 35 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 36 0.11318 3.62708 2.96083 3.55294 36 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 37 3.11302 3.83189 0.09359 3.76305 37 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 38 3.34515 2.75800 3.38327 0.14227 38 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 39 1.87019 3.14674 0.28185 3.02563 39 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 40 3.34515 2.75800 3.38327 0.14227 40 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 41 3.71437 0.10113 3.75114 3.02993 41 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 42 2.55286 3.58660 0.14601 3.49664 42 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 43 3.34515 2.75800 3.38327 0.14227 43 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 44 3.11302 3.83189 0.09359 3.76305 44 - - 1.38629 1.38629 1.38629 1.38629 0.03169 4.16072 4.16072 1.46634 0.26236 1.09861 0.40547 45 0.11318 3.62708 2.96083 3.55294 45 - - 1.38629 1.38629 1.38629 1.38629 0.01597 4.14500 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_threea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:15 2012 NSEQ 12 EFFN 4.303711 CKSUM 1979458222 STATS LOCAL MSV -6.9027 0.71932 STATS LOCAL VITERBI -7.7747 0.71932 STATS LOCAL FORWARD -4.0266 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.03263 1.23760 1.27847 1.20242 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 0.00000 * 1 3.12709 3.85275 0.09184 3.78625 1 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 2 3.73872 0.09898 3.77434 3.04707 2 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 3 3.12709 3.85275 0.09184 3.78625 3 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 4 3.73872 0.09898 3.77434 3.04707 4 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 5 3.36270 0.18073 3.41420 2.32486 5 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 6 2.59130 1.03922 2.66033 0.69031 6 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 7 3.09449 0.26748 3.15473 1.91903 7 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 8 3.13148 2.17628 3.17994 0.22152 8 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 9 3.36848 2.77289 3.40568 0.13939 9 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 10 3.12709 3.85275 0.09184 3.78625 10 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 11 3.12709 3.85275 0.09184 3.78625 11 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 12 3.36848 2.77289 3.40568 0.13939 12 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 13 0.11098 3.64881 2.97483 3.57684 13 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 14 3.36848 2.77289 3.40568 0.13939 14 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 15 3.36848 2.77289 3.40568 0.13939 15 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 16 3.73872 0.09898 3.77434 3.04707 16 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 17 3.73872 0.09898 3.77434 3.04707 17 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 18 3.36848 2.77289 3.40568 0.13939 18 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 19 2.23183 0.36008 2.73065 2.04120 19 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 20 2.06147 3.29854 0.23007 3.18647 20 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 21 0.71168 2.68528 1.01461 2.54550 21 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 22 2.44260 3.54353 0.15970 3.44975 22 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 23 3.12709 3.85275 0.09184 3.78625 23 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 24 3.73872 0.09898 3.77434 3.04707 24 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 25 0.11098 3.64881 2.97483 3.57684 25 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 26 3.36848 2.77289 3.40568 0.13939 26 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 27 3.12709 3.85275 0.09184 3.78625 27 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 28 3.73872 0.09898 3.77434 3.04707 28 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 29 3.73872 0.09898 3.77434 3.04707 29 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 30 3.36848 2.77289 3.40568 0.13939 30 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 31 0.56645 2.74603 1.22178 2.60943 31 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 32 3.36848 2.77289 3.40568 0.13939 32 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 33 3.36848 2.77289 3.40568 0.13939 33 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 34 3.73872 0.09898 3.77434 3.04707 34 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 35 3.12709 3.85275 0.09184 3.78625 35 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 36 0.11098 3.64881 2.97483 3.57684 36 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 37 3.12709 3.85275 0.09184 3.78625 37 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 38 3.73872 0.09898 3.77434 3.04707 38 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 39 3.12709 3.85275 0.09184 3.78625 39 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 40 3.36848 2.77289 3.40568 0.13939 40 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 41 3.73872 0.09898 3.77434 3.04707 41 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 42 3.12709 3.85275 0.09184 3.78625 42 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 43 3.36848 2.77289 3.40568 0.13939 43 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 44 3.36848 2.77289 3.40568 0.13939 44 - - 1.38629 1.38629 1.38629 1.38629 0.03123 4.17496 4.17496 1.46634 0.26236 1.09861 0.40547 45 1.69489 2.23452 1.95692 0.56555 45 - - 1.38629 1.38629 1.38629 1.38629 0.01574 4.15946 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_threeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:25 2012 NSEQ 6 EFFN 3.249023 CKSUM 781331319 STATS LOCAL MSV -8.1808 0.71931 STATS LOCAL VITERBI -7.7733 0.71931 STATS LOCAL FORWARD -4.1064 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93556 1.19421 1.20031 1.37986 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 * 1 2.93080 3.56347 0.11985 3.46564 1 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 2 3.40558 0.13354 3.45619 2.80891 2 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 3 2.93080 3.56347 0.11985 3.46564 3 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 4 3.40558 0.13354 3.45619 2.80891 4 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 5 3.40558 0.13354 3.45619 2.80891 5 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 6 3.06457 2.57984 3.11364 0.18260 6 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 7 2.70234 1.80840 2.76426 0.34812 7 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 8 3.40558 0.13354 3.45619 2.80891 8 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 9 3.40558 0.13354 3.45619 2.80891 9 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 10 0.14509 3.35639 2.78639 3.25580 10 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 11 2.93080 3.56347 0.11985 3.46564 11 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 12 3.06457 2.57984 3.11364 0.18260 12 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 13 0.14509 3.35639 2.78639 3.25580 13 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 14 3.06457 2.57984 3.11364 0.18260 14 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 15 3.40558 0.13354 3.45619 2.80891 15 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 16 3.40558 0.13354 3.45619 2.80891 16 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 17 3.06457 2.57984 3.11364 0.18260 17 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 18 2.93080 3.56347 0.11985 3.46564 18 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 19 2.93080 3.56347 0.11985 3.46564 19 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 20 2.93080 3.56347 0.11985 3.46564 20 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 21 0.14509 3.35639 2.78639 3.25580 21 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 22 2.93080 3.56347 0.11985 3.46564 22 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 23 2.93080 3.56347 0.11985 3.46564 23 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 24 3.40558 0.13354 3.45619 2.80891 24 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 25 0.14509 3.35639 2.78639 3.25580 25 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 26 3.06457 2.57984 3.11364 0.18260 26 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 27 2.93080 3.56347 0.11985 3.46564 27 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 28 3.40558 0.13354 3.45619 2.80891 28 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 29 3.40558 0.13354 3.45619 2.80891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 30 3.06457 2.57984 3.11364 0.18260 30 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 31 2.93080 3.56347 0.11985 3.46564 31 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 32 3.06457 2.57984 3.11364 0.18260 32 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 33 3.40558 0.13354 3.45619 2.80891 33 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 34 3.40558 0.13354 3.45619 2.80891 34 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 35 2.93080 3.56347 0.11985 3.46564 35 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 36 0.14509 3.35639 2.78639 3.25580 36 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 37 2.93080 3.56347 0.11985 3.46564 37 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 38 3.40558 0.13354 3.45619 2.80891 38 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 39 2.93080 3.56347 0.11985 3.46564 39 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 40 3.06457 2.57984 3.11364 0.18260 40 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 41 3.40558 0.13354 3.45619 2.80891 41 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 42 2.93080 3.56347 0.11985 3.46564 42 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 43 3.06457 2.57984 3.11364 0.18260 43 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 44 3.06457 2.57984 3.11364 0.18260 44 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 45 3.06457 2.57984 3.11364 0.18260 45 - - 1.38629 1.38629 1.38629 1.38629 0.01887 3.97950 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twelvea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:47:19 2012 NSEQ 2 EFFN 2.000000 CKSUM 3982407886 STATS LOCAL MSV -7.3772 0.72828 STATS LOCAL VITERBI -8.2735 0.72828 STATS LOCAL FORWARD -3.3582 0.72828 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.59176 1.33142 1.37706 1.27293 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twelveb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:47:26 2012 NSEQ 2 EFFN 2.000000 CKSUM 53452266 STATS LOCAL MSV -7.7256 0.72714 STATS LOCAL VITERBI -8.2052 0.72714 STATS LOCAL FORWARD -3.3289 0.72714 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.83846 1.06449 1.17379 1.67751 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twelvec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:47:35 2012 NSEQ 107 EFFN 7.245880 CKSUM 3390818574 STATS LOCAL MSV -6.8747 0.71932 STATS LOCAL VITERBI -7.5998 0.71932 STATS LOCAL FORWARD -4.1565 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.95559 1.14396 1.17846 1.46011 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 0.00000 * 1 3.43379 4.28329 0.06207 4.26014 1 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 2 4.24002 0.06372 4.25312 3.40796 2 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 3 2.76827 4.15885 0.09946 4.11768 3 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 4 4.24002 0.06372 4.25312 3.40796 4 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 5 3.73989 0.09154 4.09105 3.05764 5 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 6 4.02048 0.11511 4.04819 2.61272 6 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 7 2.14388 2.21253 0.46084 1.94754 7 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 8 2.74776 0.42115 1.80721 2.15827 8 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 9 2.83403 0.47396 2.56745 1.41898 9 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 10 0.46527 3.23697 1.24322 3.11680 10 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 11 3.43379 4.28329 0.06207 4.26014 11 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 12 2.82335 1.34493 3.07699 0.45580 12 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 13 0.07241 4.12095 3.29908 4.09225 13 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 14 2.31142 1.56599 2.88532 0.45230 14 - - 1.38629 1.38629 1.38629 1.38629 0.03243 4.54816 3.84795 1.46634 0.26236 1.09861 0.40547 15 3.64192 2.16486 3.67625 0.18186 15 - - 1.38629 1.38629 1.38629 1.38629 0.02164 4.53737 4.53737 1.46634 0.26236 0.68962 0.69669 16 4.24002 0.06372 4.25312 3.40796 16 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 17 3.17280 1.23422 3.23037 0.46599 17 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 18 2.66002 3.49180 0.12919 3.87295 18 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 19 2.60618 1.94896 0.30891 3.00543 19 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 20 2.41121 0.46015 2.45151 1.64536 20 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 21 2.71157 4.14225 0.10415 4.09872 21 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 22 3.12597 4.23888 0.07599 4.20948 22 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 23 3.43379 4.28329 0.06207 4.26014 23 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 24 4.06542 0.10468 4.09034 2.72576 24 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 25 0.07241 4.12095 3.29908 4.09225 25 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 26 3.61309 2.05253 3.64958 0.20014 26 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 27 3.19245 4.25002 0.07257 4.22226 27 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 28 4.24002 0.06372 4.25312 3.40796 28 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 29 4.15417 0.08412 4.17323 3.00421 29 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 30 3.42038 3.10173 3.81999 0.10492 30 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 31 3.43379 4.28329 0.06207 4.26014 31 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 32 3.80551 2.64778 3.82992 0.12191 32 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 33 3.02632 0.88571 3.08996 0.70607 33 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 34 3.99135 0.12193 4.02081 2.54623 34 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 35 3.20964 4.25274 0.07173 4.22538 35 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 36 0.07241 4.12095 3.29908 4.09225 36 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 37 3.43379 4.28329 0.06207 4.26014 37 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 38 3.65597 0.07962 4.14055 3.35865 38 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 39 3.40494 4.20772 0.07393 3.76478 39 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 40 3.00745 2.52512 3.55149 0.17215 40 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 41 4.24002 0.06372 4.25312 3.40796 41 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 42 0.13070 3.95076 2.48890 3.89821 42 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 43 3.07427 2.66328 3.16073 0.17238 43 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 44 2.88853 2.28319 2.88873 0.23986 44 - - 1.38629 1.38629 1.38629 1.38629 0.02140 4.54816 4.54816 1.46634 0.26236 1.09861 0.40547 45 1.49457 2.24592 2.28264 0.56597 45 - - 1.38629 1.38629 1.38629 1.38629 0.01076 4.53752 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentya_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:36 2012 NSEQ 2 EFFN 2.000000 CKSUM 2901513352 STATS LOCAL MSV -7.6665 0.72813 STATS LOCAL VITERBI -8.3101 0.72813 STATS LOCAL FORWARD -3.6357 0.72813 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58685 1.45101 1.26409 1.27798 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.81865 0.23582 2.88868 2.35662 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:45 2012 NSEQ 3 EFFN 3.000000 CKSUM 3756287080 STATS LOCAL MSV -7.8289 0.72081 STATS LOCAL VITERBI -7.9009 0.72081 STATS LOCAL FORWARD -4.0995 0.72081 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.75523 1.44620 1.19391 1.24259 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.30705 0.14631 3.36166 2.73626 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.70020 2.19823 2.14894 1.28770 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:49:51 2012 NSEQ 106 EFFN 7.715149 CKSUM 2322158090 STATS LOCAL MSV -6.9114 0.71932 STATS LOCAL VITERBI -7.4888 0.71932 STATS LOCAL FORWARD -4.3259 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.70316 1.49955 1.24980 1.17733 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 0.00000 * 1 3.46876 4.32749 0.05956 4.30761 1 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 2 4.22699 0.07714 4.24282 3.09504 2 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 3 1.43141 3.43577 0.36712 3.32137 3 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 4 4.29003 0.06092 4.30133 3.44675 4 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 5 3.09644 0.90352 3.15884 0.67890 5 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 6 3.11385 0.60736 3.17745 0.99671 6 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 7 2.99194 1.34750 2.75246 0.46816 7 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 8 3.45532 1.58083 3.50210 0.31131 8 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 9 3.56738 2.46232 3.08828 0.17322 9 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 10 2.91676 4.24574 0.08689 4.21361 10 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 11 3.46876 4.32749 0.05956 4.30761 11 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 12 3.77690 2.32124 3.80563 0.15466 12 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 13 0.06910 4.17150 3.33773 4.14640 13 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 14 3.21466 2.85833 3.75853 0.12880 14 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 15 3.92671 2.94251 3.94513 0.09628 15 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 16 4.29003 0.06092 4.30133 3.44675 16 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 17 3.87630 0.16394 3.91362 2.20263 17 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 18 2.71972 3.97048 0.12721 3.36118 18 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 19 0.27040 3.63339 1.70633 3.54166 19 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 20 0.43399 2.80695 1.42528 2.97106 20 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 21 1.18444 3.27447 0.48867 3.15105 21 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 22 0.67506 3.16103 0.91539 3.03377 22 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 23 3.46876 4.32749 0.05956 4.30761 23 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 24 3.25386 0.43013 3.31456 1.29245 24 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 25 0.06910 4.17150 3.33773 4.14640 25 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 26 3.41080 1.50448 3.45970 0.33769 26 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 27 2.19363 3.98544 0.16248 3.91846 27 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 28 3.95365 0.14405 3.98684 2.33911 28 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 29 4.29003 0.06092 4.30133 3.44675 29 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 30 3.89968 2.80364 3.92004 0.10611 30 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 31 3.46876 4.32749 0.05956 4.30761 31 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 32 3.96624 3.17987 3.98181 0.08250 32 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 33 3.41813 2.77106 3.79917 0.12529 33 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 34 3.57026 1.79718 3.61118 0.24966 34 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 35 3.43251 3.65245 0.07612 4.19561 35 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 36 0.08060 4.14017 3.09842 4.11066 36 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 37 3.46876 4.32749 0.05956 4.30761 37 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 38 3.73707 2.84571 3.26195 0.12810 38 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 39 2.84122 4.22904 0.09212 4.19438 39 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 40 3.96624 3.17987 3.98181 0.08250 40 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 41 4.24838 0.07173 4.26268 3.19790 41 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 42 0.25052 3.42405 2.03380 2.84413 42 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 43 3.91957 2.90425 3.93851 0.09884 43 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 44 2.49153 2.82355 0.36557 1.80778 44 - - 1.38629 1.38629 1.38629 1.38629 0.02038 4.59665 4.59665 1.46634 0.26236 1.09861 0.40547 45 0.16824 3.64720 2.73517 2.75036 45 - - 1.38629 1.38629 1.38629 1.38629 0.01024 4.58651 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:51:19 2012 NSEQ 4 EFFN 3.511719 CKSUM 2180562685 STATS LOCAL MSV -7.5761 0.71932 STATS LOCAL VITERBI -7.7560 0.71932 STATS LOCAL FORWARD -4.2810 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46842 1.47278 1.30641 1.31069 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 0.00000 * 1 2.98801 3.64693 0.11089 3.55782 1 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 2 3.50057 0.12244 3.54711 2.87785 2 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 3 2.98801 3.64693 0.11089 3.55782 3 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 4 3.50057 0.12244 3.54711 2.87785 4 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 5 3.50057 0.12244 3.54711 2.87785 5 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 6 2.43894 0.95160 2.51060 0.80878 6 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 7 0.13439 3.43892 2.83989 3.34620 7 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 8 0.13439 3.43892 2.83989 3.34620 8 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 9 3.14821 2.63300 3.19407 0.16936 9 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 10 2.98801 3.64693 0.11089 3.55782 10 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 11 2.98801 3.64693 0.11089 3.55782 11 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 12 3.14821 2.63300 3.19407 0.16936 12 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 13 0.13439 3.43892 2.83989 3.34620 13 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 14 3.14821 2.63300 3.19407 0.16936 14 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 15 3.14821 2.63300 3.19407 0.16936 15 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 16 3.50057 0.12244 3.54711 2.87785 16 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 17 3.50057 0.12244 3.54711 2.87785 17 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 18 0.13439 3.43892 2.83989 3.34620 18 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 19 2.43894 0.95160 2.51060 0.80878 19 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 20 3.14821 2.63300 3.19407 0.16936 20 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 21 2.98801 3.64693 0.11089 3.55782 21 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 22 2.98801 3.64693 0.11089 3.55782 22 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 23 2.98801 3.64693 0.11089 3.55782 23 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 24 3.50057 0.12244 3.54711 2.87785 24 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 25 0.13439 3.43892 2.83989 3.34620 25 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 26 3.14821 2.63300 3.19407 0.16936 26 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 27 0.13439 3.43892 2.83989 3.34620 27 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 28 3.50057 0.12244 3.54711 2.87785 28 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 29 3.50057 0.12244 3.54711 2.87785 29 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 30 3.14821 2.63300 3.19407 0.16936 30 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 31 2.98801 3.64693 0.11089 3.55782 31 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 32 3.14821 2.63300 3.19407 0.16936 32 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 33 3.14821 2.63300 3.19407 0.16936 33 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 34 3.14821 2.63300 3.19407 0.16936 34 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 35 2.98801 3.64693 0.11089 3.55782 35 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 36 0.13439 3.43892 2.83989 3.34620 36 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 37 2.98801 3.64693 0.11089 3.55782 37 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 38 3.14821 2.63300 3.19407 0.16936 38 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 39 2.98801 3.64693 0.11089 3.55782 39 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 40 3.14821 2.63300 3.19407 0.16936 40 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 41 3.50057 0.12244 3.54711 2.87785 41 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 42 0.13439 3.43892 2.83989 3.34620 42 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 43 2.98801 3.64693 0.11089 3.55782 43 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 44 0.13439 3.43892 2.83989 3.34620 44 - - 1.38629 1.38629 1.38629 1.38629 0.03564 4.04510 4.04510 1.46634 0.26236 1.09861 0.40547 45 0.13439 3.43892 2.83989 3.34620 45 - - 1.38629 1.38629 1.38629 1.38629 0.01798 4.02744 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:50 2012 NSEQ 3 EFFN 3.000000 CKSUM 3616253141 STATS LOCAL MSV -7.9508 0.72090 STATS LOCAL VITERBI -7.7767 0.72090 STATS LOCAL FORWARD -4.1429 0.72090 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46379 1.55696 1.31134 1.24339 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 0.15719 3.27118 2.73043 3.16274 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.43223 0.62271 2.50508 1.22417 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:39 2012 NSEQ 5 EFFN 3.276367 CKSUM 3556920972 STATS LOCAL MSV -7.8622 0.71933 STATS LOCAL VITERBI -7.8111 0.71933 STATS LOCAL FORWARD -4.2004 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55229 1.45230 1.31440 1.25326 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 0.00000 * 1 2.93708 3.57257 0.11883 3.47567 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 2 3.41588 0.13228 3.46607 2.81644 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 3 2.93708 3.57257 0.11883 3.47567 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 4 3.41588 0.13228 3.46607 2.81644 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 5 3.07355 2.58556 3.12228 0.18112 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 6 3.07355 2.58556 3.12228 0.18112 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 7 3.07355 2.58556 3.12228 0.18112 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 8 3.41588 0.13228 3.46607 2.81644 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 9 3.07355 2.58556 3.12228 0.18112 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 10 2.93708 3.57257 0.11883 3.47567 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 11 2.93708 3.57257 0.11883 3.47567 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 12 3.07355 2.58556 3.12228 0.18112 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 13 0.14388 3.36532 2.79221 3.26557 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 14 3.07355 2.58556 3.12228 0.18112 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 15 3.07355 2.58556 3.12228 0.18112 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 16 3.41588 0.13228 3.46607 2.81644 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 17 3.41588 0.13228 3.46607 2.81644 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 18 2.93708 3.57257 0.11883 3.47567 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 19 2.93708 3.57257 0.11883 3.47567 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 20 0.14388 3.36532 2.79221 3.26557 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 21 0.14388 3.36532 2.79221 3.26557 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 22 0.14388 3.36532 2.79221 3.26557 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 23 2.93708 3.57257 0.11883 3.47567 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 24 3.41588 0.13228 3.46607 2.81644 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 25 0.14388 3.36532 2.79221 3.26557 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 26 3.07355 2.58556 3.12228 0.18112 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 27 2.93708 3.57257 0.11883 3.47567 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 28 3.41588 0.13228 3.46607 2.81644 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 29 3.41588 0.13228 3.46607 2.81644 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 30 3.07355 2.58556 3.12228 0.18112 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 31 2.93708 3.57257 0.11883 3.47567 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 32 3.07355 2.58556 3.12228 0.18112 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 33 3.07355 2.58556 3.12228 0.18112 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 34 3.07355 2.58556 3.12228 0.18112 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 35 2.93708 3.57257 0.11883 3.47567 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 36 0.14388 3.36532 2.79221 3.26557 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 37 2.93708 3.57257 0.11883 3.47567 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 38 0.14388 3.36532 2.79221 3.26557 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 39 0.14388 3.36532 2.79221 3.26557 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 40 3.07355 2.58556 3.12228 0.18112 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 41 3.41588 0.13228 3.46607 2.81644 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 42 2.93708 3.57257 0.11883 3.47567 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 43 0.14388 3.36532 2.79221 3.26557 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 44 3.07355 2.58556 3.12228 0.18112 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00303 4.00303 1.46634 0.26236 1.09861 0.40547 45 3.41588 0.13228 3.46607 2.81644 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98460 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:51:36 2012 NSEQ 3 EFFN 3.000000 CKSUM 2190731302 STATS LOCAL MSV -7.8683 0.72073 STATS LOCAL VITERBI -7.9440 0.72073 STATS LOCAL FORWARD -4.1358 0.72073 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54088 1.50849 1.25120 1.27868 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.43088 1.34923 2.50068 0.56112 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 0.15719 3.27118 2.73043 3.16274 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:06 2012 NSEQ 68 EFFN 5.341553 CKSUM 4218474599 STATS LOCAL MSV -6.5408 0.71932 STATS LOCAL VITERBI -7.4328 0.71932 STATS LOCAL FORWARD -4.1545 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62069 1.55251 1.29618 1.14902 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 0.00000 * 1 3.26035 4.04757 0.07700 4.00244 1 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 2 3.96701 0.08104 3.99180 3.20779 2 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 3 1.52805 3.12519 0.37201 3.00039 3 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 4 3.96701 0.08104 3.99180 3.20779 4 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 5 3.40124 2.31825 3.44070 0.17891 5 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 6 3.68743 0.13742 3.72728 2.53455 6 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 7 3.29901 2.08124 3.34377 0.21940 7 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 8 2.38069 0.68216 2.61986 1.11117 8 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 9 3.47638 2.51932 3.51166 0.15231 9 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 10 3.26035 4.04757 0.07700 4.00244 10 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 11 3.26035 4.04757 0.07700 4.00244 11 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 12 3.39968 2.31436 3.43922 0.17949 12 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 13 0.09202 3.85699 3.11153 3.80553 13 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 14 3.59866 2.92234 3.62689 0.11403 14 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 15 3.59866 2.92234 3.62689 0.11403 15 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 16 3.96701 0.08104 3.99180 3.20779 16 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 17 3.96701 0.08104 3.99180 3.20779 17 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 18 2.94997 3.96296 0.09587 3.90836 18 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 19 1.32281 2.72059 0.54730 2.41610 19 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 20 0.20881 3.46473 2.09684 3.37196 20 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 21 2.76877 3.89809 0.11049 3.83584 21 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 22 0.14674 3.65907 2.48878 3.58575 22 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 23 3.26035 4.04757 0.07700 4.00244 23 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 24 2.87459 0.49645 2.94120 1.26560 24 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 25 0.09202 3.85699 3.11153 3.80553 25 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 26 3.59866 2.92234 3.62689 0.11403 26 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 27 3.26035 4.04757 0.07700 4.00244 27 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 28 3.96701 0.08104 3.99180 3.20779 28 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 29 2.92149 1.37844 2.98235 0.44083 29 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 30 3.59866 2.92234 3.62689 0.11403 30 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 31 3.26035 4.04757 0.07700 4.00244 31 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 32 3.59866 2.92234 3.62689 0.11403 32 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 33 3.59866 2.92234 3.62689 0.11403 33 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 34 3.59866 2.92234 3.62689 0.11403 34 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 35 2.64770 1.86285 0.34080 2.76854 35 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 36 0.09202 3.85699 3.11153 3.80553 36 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 37 3.26035 4.04757 0.07700 4.00244 37 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 38 3.59866 2.92234 3.62689 0.11403 38 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 39 0.13763 3.02354 3.00496 3.49315 39 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 40 3.59866 2.92234 3.62689 0.11403 40 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 41 3.68325 0.13835 3.72330 2.52688 41 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 42 0.27590 3.03860 2.28855 2.38821 42 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 43 2.68665 2.95626 0.31729 1.88545 43 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 44 2.48890 2.39411 1.91395 0.38824 44 - - 1.38629 1.38629 1.38629 1.38629 0.02688 4.32301 4.32301 1.46634 0.26236 1.09861 0.40547 45 0.09202 3.85699 3.11153 3.80553 45 - - 1.38629 1.38629 1.38629 1.38629 0.01353 4.30966 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:51:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 3213938601 STATS LOCAL MSV -7.6048 0.72810 STATS LOCAL VITERBI -8.1240 0.72810 STATS LOCAL FORWARD -3.6947 0.72810 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.52232 1.39334 1.31725 1.32547 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:59 2012 NSEQ 37 EFFN 3.915894 CKSUM 651011829 STATS LOCAL MSV -7.1790 0.71932 STATS LOCAL VITERBI -7.5990 0.71932 STATS LOCAL FORWARD -4.3085 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.79308 1.26228 1.22085 1.36428 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 0.00000 * 1 3.06437 3.75968 0.09996 3.68283 1 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 2 3.63043 0.10895 3.67113 2.97063 2 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 3 3.06437 3.75968 0.09996 3.68283 3 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 4 3.63043 0.10895 3.67113 2.97063 4 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 5 3.63043 0.10895 3.67113 2.97063 5 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 6 2.86784 0.34787 2.93342 1.69404 6 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 7 3.26622 2.70781 3.30746 0.15250 7 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 8 0.29259 2.85457 2.32499 2.31963 8 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 9 3.15746 2.42678 3.20340 0.18811 9 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 10 3.06437 3.75968 0.09996 3.68283 10 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 11 3.06437 3.75968 0.09996 3.68283 11 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 12 2.32385 2.52026 2.86722 0.26813 12 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 13 0.12108 3.55271 2.91304 3.47115 13 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 14 2.97944 2.59704 2.67505 0.21594 14 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 15 3.26622 2.70781 3.30746 0.15250 15 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 16 3.63043 0.10895 3.67113 2.97063 16 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 17 3.31201 0.17916 3.36488 2.37499 17 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 18 0.97278 2.62486 0.76362 2.48239 18 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 19 3.26622 2.70781 3.30746 0.15250 19 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 20 0.19654 3.19505 2.52840 2.85282 20 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 21 2.11817 3.25348 0.22591 3.13914 21 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 22 3.06437 3.75968 0.09996 3.68283 22 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 23 3.06437 3.75968 0.09996 3.68283 23 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 24 3.63043 0.10895 3.67113 2.97063 24 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 25 0.12108 3.55271 2.91304 3.47115 25 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 26 3.26622 2.70781 3.30746 0.15250 26 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 27 3.06437 3.75968 0.09996 3.68283 27 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 28 3.63043 0.10895 3.67113 2.97063 28 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 29 3.63043 0.10895 3.67113 2.97063 29 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 30 3.26622 2.70781 3.30746 0.15250 30 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 31 3.06437 3.75968 0.09996 3.68283 31 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 32 3.26622 2.70781 3.30746 0.15250 32 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 33 3.63043 0.10895 3.67113 2.97063 33 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 34 3.26622 2.70781 3.30746 0.15250 34 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 35 3.06437 3.75968 0.09996 3.68283 35 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 36 0.12108 3.55271 2.91304 3.47115 36 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 37 3.06437 3.75968 0.09996 3.68283 37 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 38 3.49675 0.13558 3.54266 2.69470 38 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 39 3.06437 3.75968 0.09996 3.68283 39 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 40 3.26622 2.70781 3.30746 0.15250 40 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 41 3.49245 0.13650 3.53853 2.68663 41 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 42 0.12108 3.55271 2.91304 3.47115 42 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 43 2.80123 3.65034 0.12217 3.56560 43 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 44 3.63043 0.10895 3.67113 2.97063 44 - - 1.38629 1.38629 1.38629 1.38629 0.03325 4.11348 4.11348 1.46634 0.26236 1.09861 0.40547 45 1.87124 2.39122 2.61199 0.38396 45 - - 1.38629 1.38629 1.38629 1.38629 0.01676 4.09699 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:25 2012 NSEQ 6 EFFN 3.436523 CKSUM 3090229925 STATS LOCAL MSV -7.5604 0.71933 STATS LOCAL VITERBI -7.6790 0.71933 STATS LOCAL FORWARD -4.3074 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.85410 1.38636 1.25228 1.17905 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 0.00000 * 1 2.97231 3.62392 0.11328 3.53237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 2 3.47427 0.12540 3.52197 2.85887 2 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 3 2.97231 3.62392 0.11328 3.53237 3 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 4 3.47427 0.12540 3.52197 2.85887 4 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 5 3.47427 0.12540 3.52197 2.85887 5 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 6 3.47427 0.12540 3.52197 2.85887 6 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 7 3.12486 2.61817 3.17162 0.17294 7 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 8 3.12486 2.61817 3.17162 0.17294 8 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 9 3.12486 2.61817 3.17162 0.17294 9 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 10 2.97231 3.62392 0.11328 3.53237 10 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 11 2.97231 3.62392 0.11328 3.53237 11 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 12 3.12486 2.61817 3.17162 0.17294 12 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 13 0.13726 3.41603 2.82510 3.32110 13 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 14 3.12486 2.61817 3.17162 0.17294 14 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 15 3.12486 2.61817 3.17162 0.17294 15 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 16 3.47427 0.12540 3.52197 2.85887 16 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 17 3.47427 0.12540 3.52197 2.85887 17 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 18 3.12486 2.61817 3.17162 0.17294 18 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 19 3.12486 2.61817 3.17162 0.17294 19 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 20 0.39098 2.58450 2.40283 1.84700 20 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 21 2.97231 3.62392 0.11328 3.53237 21 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 22 2.97231 3.62392 0.11328 3.53237 22 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 23 2.97231 3.62392 0.11328 3.53237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 24 3.47427 0.12540 3.52197 2.85887 24 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 25 0.13726 3.41603 2.82510 3.32110 25 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 26 3.12486 2.61817 3.17162 0.17294 26 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 27 2.97231 3.62392 0.11328 3.53237 27 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 28 3.47427 0.12540 3.52197 2.85887 28 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 29 3.47427 0.12540 3.52197 2.85887 29 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 30 3.12486 2.61817 3.17162 0.17294 30 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 31 2.97231 3.62392 0.11328 3.53237 31 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 32 3.12486 2.61817 3.17162 0.17294 32 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 33 3.12486 2.61817 3.17162 0.17294 33 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 34 3.12486 2.61817 3.17162 0.17294 34 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 35 2.97231 3.62392 0.11328 3.53237 35 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 36 0.13726 3.41603 2.82510 3.32110 36 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 37 2.97231 3.62392 0.11328 3.53237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 38 3.12486 2.61817 3.17162 0.17294 38 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 39 2.97231 3.62392 0.11328 3.53237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 40 3.12486 2.61817 3.17162 0.17294 40 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 41 3.47427 0.12540 3.52197 2.85887 41 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 42 0.13726 3.41603 2.82510 3.32110 42 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 43 2.86916 0.31048 2.93446 1.85149 43 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 44 2.97231 3.62392 0.11328 3.53237 44 - - 1.38629 1.38629 1.38629 1.38629 0.03613 4.03185 4.03185 1.46634 0.26236 1.09861 0.40547 45 0.13726 3.41603 2.82510 3.32110 45 - - 1.38629 1.38629 1.38629 1.38629 0.01823 4.01395 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:50:15 2012 NSEQ 11 EFFN 3.681885 CKSUM 2596440244 STATS LOCAL MSV -7.5312 0.71931 STATS LOCAL VITERBI -7.6564 0.71931 STATS LOCAL FORWARD -4.1623 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81337 1.37351 1.14455 1.32684 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 0.00000 * 1 3.02172 3.69656 0.10592 3.61280 1 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 2 3.55753 0.11630 3.60155 2.91873 2 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 3 3.02172 3.69656 0.10592 3.61280 3 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 4 3.55753 0.11630 3.60155 2.91873 4 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 5 3.19941 2.66545 3.24327 0.16180 5 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 6 3.55753 0.11630 3.60155 2.91873 6 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 7 2.63603 0.49551 2.70597 1.37718 7 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 8 0.21804 3.18229 2.22426 3.07335 8 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 9 3.19941 2.66545 3.24327 0.16180 9 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 10 3.02172 3.69656 0.10592 3.61280 10 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 11 3.02172 3.69656 0.10592 3.61280 11 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 12 2.96563 2.12315 3.01906 0.24850 12 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 13 0.12838 3.48867 2.87192 3.40079 13 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 14 3.19941 2.66545 3.24327 0.16180 14 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 15 3.19941 2.66545 3.24327 0.16180 15 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 16 3.55753 0.11630 3.60155 2.91873 16 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 17 3.55753 0.11630 3.60155 2.91873 17 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 18 3.02172 3.69656 0.10592 3.61280 18 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 19 2.93570 2.06236 2.99033 0.26204 19 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 20 1.52298 2.81457 0.42568 2.67830 20 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 21 3.02172 3.69656 0.10592 3.61280 21 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 22 0.12838 3.48867 2.87192 3.40079 22 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 23 3.02172 3.69656 0.10592 3.61280 23 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 24 3.55753 0.11630 3.60155 2.91873 24 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 25 0.12838 3.48867 2.87192 3.40079 25 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 26 3.19941 2.66545 3.24327 0.16180 26 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 27 3.02172 3.69656 0.10592 3.61280 27 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 28 3.55753 0.11630 3.60155 2.91873 28 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 29 3.55753 0.11630 3.60155 2.91873 29 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 30 3.19941 2.66545 3.24327 0.16180 30 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 31 3.02172 3.69656 0.10592 3.61280 31 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 32 3.19941 2.66545 3.24327 0.16180 32 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 33 3.19941 2.66545 3.24327 0.16180 33 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 34 3.19941 2.66545 3.24327 0.16180 34 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 35 3.02172 3.69656 0.10592 3.61280 35 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 36 0.12838 3.48867 2.87192 3.40079 36 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 37 3.02172 3.69656 0.10592 3.61280 37 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 38 3.19941 2.66545 3.24327 0.16180 38 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 39 3.02172 3.69656 0.10592 3.61280 39 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 40 3.55753 0.11630 3.60155 2.91873 40 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 41 3.55753 0.11630 3.60155 2.91873 41 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 42 3.02172 3.69656 0.10592 3.61280 42 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 43 2.48645 1.07778 2.55681 0.69537 43 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 44 3.02172 3.69656 0.10592 3.61280 44 - - 1.38629 1.38629 1.38629 1.38629 0.03459 4.07446 4.07446 1.46634 0.26236 1.09861 0.40547 45 0.12838 3.48867 2.87192 3.40079 45 - - 1.38629 1.38629 1.38629 1.38629 0.01745 4.05731 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 12:45:04 2012 NSEQ 29 EFFN 4.088745 CKSUM 2970548822 STATS LOCAL MSV -7.1292 0.71933 STATS LOCAL VITERBI -7.6020 0.71933 STATS LOCAL FORWARD -4.3912 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81517 1.41265 1.28986 1.14450 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 0.00000 * 1 3.09344 3.80283 0.09610 3.73076 1 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 2 3.68053 0.10420 3.71889 3.00607 2 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 3 3.09344 3.80283 0.09610 3.73076 3 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 4 3.68053 0.10420 3.71889 3.00607 4 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 5 3.68053 0.10420 3.71889 3.00607 5 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 6 3.47837 0.14505 3.52510 2.59412 6 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 7 0.17395 3.38247 2.42616 3.28821 7 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 8 3.31305 2.73756 3.35243 0.14634 8 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 9 1.85277 1.67003 2.38454 0.57479 9 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 10 3.09344 3.80283 0.09610 3.73076 10 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 11 3.09344 3.80283 0.09610 3.73076 11 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 12 3.31305 2.73756 3.35243 0.14634 12 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 13 0.11631 3.59700 2.94148 3.51985 13 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 14 3.31305 2.73756 3.35243 0.14634 14 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 15 3.31305 2.73756 3.35243 0.14634 15 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 16 3.68053 0.10420 3.71889 3.00607 16 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 17 3.68053 0.10420 3.71889 3.00607 17 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 18 1.34104 2.09702 1.46128 0.95799 18 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 19 2.10650 2.48563 2.77583 0.31093 19 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 20 3.11794 2.24897 3.16622 0.21309 20 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 21 2.70121 3.63818 0.13019 3.55276 21 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 22 3.09344 3.80283 0.09610 3.73076 22 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 23 3.09344 3.80283 0.09610 3.73076 23 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 24 3.68053 0.10420 3.71889 3.00607 24 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 25 0.11631 3.59700 2.94148 3.51985 25 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 26 3.02637 2.05656 3.07864 0.25155 26 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 27 3.09344 3.80283 0.09610 3.73076 27 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 28 3.17296 2.37360 3.21873 0.19241 28 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 29 3.68053 0.10420 3.71889 3.00607 29 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 30 3.31305 2.73756 3.35243 0.14634 30 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 31 3.09344 3.80283 0.09610 3.73076 31 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 32 3.31305 2.73756 3.35243 0.14634 32 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 33 3.31305 2.73756 3.35243 0.14634 33 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 34 3.17296 2.37360 3.21873 0.19241 34 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 35 3.09344 3.80283 0.09610 3.73076 35 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 36 0.11631 3.59700 2.94148 3.51985 36 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 37 3.09344 3.80283 0.09610 3.73076 37 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 38 3.68053 0.10420 3.71889 3.00607 38 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 39 3.09344 3.80283 0.09610 3.73076 39 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 40 3.31305 2.73756 3.35243 0.14634 40 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 41 3.68053 0.10420 3.71889 3.00607 41 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 42 0.11631 3.59700 2.94148 3.51985 42 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 43 3.31305 2.73756 3.35243 0.14634 43 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 44 2.88231 2.56606 2.43104 0.24947 44 - - 1.38629 1.38629 1.38629 1.38629 0.03232 4.14135 4.14135 1.46634 0.26236 1.09861 0.40547 45 0.31033 2.81806 2.56990 2.03614 45 - - 1.38629 1.38629 1.38629 1.38629 0.01629 4.12532 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ca_58S_start_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:00:44 2012 NSEQ 29 EFFN 3.288696 CKSUM 3372901085 STATS LOCAL MSV -8.0570 0.71933 STATS LOCAL VITERBI -7.4166 0.71933 STATS LOCAL FORWARD -4.4707 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21838 1.38684 1.60959 1.36862 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 0.00000 * 1 3.07758 2.58812 3.12615 0.18046 1 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 2 0.14335 3.36932 2.79481 3.26995 2 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 3 0.14335 3.36932 2.79481 3.26995 3 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 4 3.42049 0.13172 3.47049 2.81981 4 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 5 3.07758 2.58812 3.12615 0.18046 5 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 6 3.42049 0.13172 3.47049 2.81981 6 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 7 3.07758 2.58812 3.12615 0.18046 7 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 8 3.42049 0.13172 3.47049 2.81981 8 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 9 0.14335 3.36932 2.79481 3.26995 9 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 10 0.14335 3.36932 2.79481 3.26995 10 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 11 3.42049 0.13172 3.47049 2.81981 11 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 12 0.14335 3.36932 2.79481 3.26995 12 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 13 0.14335 3.36932 2.79481 3.26995 13 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 14 3.07758 2.58812 3.12615 0.18046 14 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 15 2.93988 3.57664 0.11838 3.48016 15 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 16 2.93988 3.57664 0.11838 3.48016 16 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 17 0.14335 3.36932 2.79481 3.26995 17 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 18 3.07758 2.58812 3.12615 0.18046 18 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 19 3.42049 0.13172 3.47049 2.81981 19 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 20 3.07758 2.58812 3.12615 0.18046 20 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 21 3.42049 0.13172 3.47049 2.81981 21 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 22 3.07758 2.58812 3.12615 0.18046 22 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 23 0.14335 3.36932 2.79481 3.26995 23 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 24 2.93988 3.57664 0.11838 3.48016 24 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 25 2.93988 3.57664 0.11838 3.48016 25 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 26 3.42049 0.13172 3.47049 2.81981 26 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 27 3.07758 2.58812 3.12615 0.18046 27 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 28 3.42049 0.13172 3.47049 2.81981 28 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 29 3.07758 2.58812 3.12615 0.18046 29 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 30 3.07758 2.58812 3.12615 0.18046 30 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 31 2.93988 3.57664 0.11838 3.48016 31 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 32 3.42049 0.13172 3.47049 2.81981 32 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 33 0.14335 3.36932 2.79481 3.26995 33 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 34 3.07758 2.58812 3.12615 0.18046 34 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 35 3.42049 0.13172 3.47049 2.81981 35 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 36 2.93988 3.57664 0.11838 3.48016 36 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 37 0.14335 3.36932 2.79481 3.26995 37 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 38 3.07758 2.58812 3.12615 0.18046 38 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 39 2.93988 3.57664 0.11838 3.48016 39 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 40 0.14335 3.36932 2.79481 3.26995 40 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 41 0.14335 3.36932 2.79481 3.26995 41 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 42 2.93988 3.57664 0.11838 3.48016 42 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 43 0.14335 3.36932 2.79481 3.26995 43 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 44 0.14335 3.36932 2.79481 3.26995 44 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00528 4.00528 1.46634 0.26236 1.09861 0.40547 45 3.42049 0.13172 3.47049 2.81981 45 - - 1.38629 1.38629 1.38629 1.38629 0.01873 3.98689 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Cr_58S_start_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:48:14 2012 NSEQ 11 EFFN 3.332764 CKSUM 4220584664 STATS LOCAL MSV -8.2403 0.71932 STATS LOCAL VITERBI -7.6155 0.71932 STATS LOCAL FORWARD -4.1698 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33529 1.38105 1.53687 1.30729 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 0.00000 * 1 3.43682 0.12977 3.48612 2.83170 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 2 0.14147 3.38349 2.80402 3.28545 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 3 0.14147 3.38349 2.80402 3.28545 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 4 3.43682 0.12977 3.48612 2.83170 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 5 3.09186 2.59721 3.13989 0.17815 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 6 3.09186 2.59721 3.13989 0.17815 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 7 3.09186 2.59721 3.13989 0.17815 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 8 3.43682 0.12977 3.48612 2.83170 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 9 0.14147 3.38349 2.80402 3.28545 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 10 2.94977 3.59102 0.11680 3.49603 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 11 3.43682 0.12977 3.48612 2.83170 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 12 0.14147 3.38349 2.80402 3.28545 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 13 0.14147 3.38349 2.80402 3.28545 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 14 3.09186 2.59721 3.13989 0.17815 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 15 2.94977 3.59102 0.11680 3.49603 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 16 2.94977 3.59102 0.11680 3.49603 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 17 0.14147 3.38349 2.80402 3.28545 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 18 3.09186 2.59721 3.13989 0.17815 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 19 3.43682 0.12977 3.48612 2.83170 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 20 3.09186 2.59721 3.13989 0.17815 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 21 3.43682 0.12977 3.48612 2.83170 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 22 3.09186 2.59721 3.13989 0.17815 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 23 3.09186 2.59721 3.13989 0.17815 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 24 2.94977 3.59102 0.11680 3.49603 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 25 2.94977 3.59102 0.11680 3.49603 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 26 3.09186 2.59721 3.13989 0.17815 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 27 3.09186 2.59721 3.13989 0.17815 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 28 3.43682 0.12977 3.48612 2.83170 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 29 3.09186 2.59721 3.13989 0.17815 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 30 3.43682 0.12977 3.48612 2.83170 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 31 2.94977 3.59102 0.11680 3.49603 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 32 3.43682 0.12977 3.48612 2.83170 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 33 0.14147 3.38349 2.80402 3.28545 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 34 3.09186 2.59721 3.13989 0.17815 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 35 3.43682 0.12977 3.48612 2.83170 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 36 2.94977 3.59102 0.11680 3.49603 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 37 0.14147 3.38349 2.80402 3.28545 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 38 3.09186 2.59721 3.13989 0.17815 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 39 2.94977 3.59102 0.11680 3.49603 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 40 0.14147 3.38349 2.80402 3.28545 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 41 0.14147 3.38349 2.80402 3.28545 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 42 2.34240 3.26537 0.19488 3.15144 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 43 0.14147 3.38349 2.80402 3.28545 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 44 0.14147 3.38349 2.80402 3.28545 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01327 4.01327 1.46634 0.26236 1.09861 0.40547 45 3.43682 0.12977 3.48612 2.83170 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99503 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:50 2012 NSEQ 123 EFFN 3.209381 CKSUM 2380382984 STATS LOCAL MSV -8.1262 0.71931 STATS LOCAL VITERBI -7.8256 0.71931 STATS LOCAL FORWARD -4.3030 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40575 1.26346 1.38423 1.50676 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 0.00000 * 1 3.39046 0.13541 3.44171 2.79784 1 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 2 0.14688 3.34329 2.77784 3.24148 2 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 3 0.14688 3.34329 2.77784 3.24148 3 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 4 3.39046 0.13541 3.44171 2.79784 4 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 5 3.39046 0.13541 3.44171 2.79784 5 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 6 0.14688 3.34329 2.77784 3.24148 6 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 7 2.92156 3.55011 0.12136 3.45091 7 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 8 3.05145 2.57147 3.10101 0.18478 8 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 9 0.14688 3.34329 2.77784 3.24148 9 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 10 2.92156 3.55011 0.12136 3.45091 10 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 11 3.39046 0.13541 3.44171 2.79784 11 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 12 2.92156 3.55011 0.12136 3.45091 12 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 13 3.05145 2.57147 3.10101 0.18478 13 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 14 3.05145 2.57147 3.10101 0.18478 14 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 15 2.92156 3.55011 0.12136 3.45091 15 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 16 2.92156 3.55011 0.12136 3.45091 16 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 17 0.14688 3.34329 2.77784 3.24148 17 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 18 3.05145 2.57147 3.10101 0.18478 18 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 19 3.39046 0.13541 3.44171 2.79784 19 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 20 3.39046 0.13541 3.44171 2.79784 20 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 21 3.39046 0.13541 3.44171 2.79784 21 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 22 3.05145 2.57147 3.10101 0.18478 22 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 23 3.05145 2.57147 3.10101 0.18478 23 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 24 2.92156 3.55011 0.12136 3.45091 24 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 25 2.92156 3.55011 0.12136 3.45091 25 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 26 3.39046 0.13541 3.44171 2.79784 26 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 27 0.14688 3.34329 2.77784 3.24148 27 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 28 3.39046 0.13541 3.44171 2.79784 28 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 29 2.92156 3.55011 0.12136 3.45091 29 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 30 3.05145 2.57147 3.10101 0.18478 30 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 31 3.39046 0.13541 3.44171 2.79784 31 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 32 0.14688 3.34329 2.77784 3.24148 32 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 33 3.05145 2.57147 3.10101 0.18478 33 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 34 3.05145 2.57147 3.10101 0.18478 34 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 35 3.39046 0.13541 3.44171 2.79784 35 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 36 2.92156 3.55011 0.12136 3.45091 36 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 37 0.14688 3.34329 2.77784 3.24148 37 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 38 3.05145 2.57147 3.10101 0.18478 38 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 39 2.92156 3.55011 0.12136 3.45091 39 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 40 0.14688 3.34329 2.77784 3.24148 40 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 41 0.14688 3.34329 2.77784 3.24148 41 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 42 2.92156 3.55011 0.12136 3.45091 42 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 43 0.14688 3.34329 2.77784 3.24148 43 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 44 3.39046 0.13541 3.44171 2.79784 44 - - 1.38629 1.38629 1.38629 1.38629 0.03767 3.99072 3.99072 1.46634 0.26236 1.09861 0.40547 45 3.39046 0.13541 3.44171 2.79784 45 - - 1.38629 1.38629 1.38629 1.38629 0.01901 3.97206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:24 2012 NSEQ 3 EFFN 3.000000 CKSUM 3760255109 STATS LOCAL MSV -8.0117 0.71991 STATS LOCAL VITERBI -7.8366 0.71991 STATS LOCAL FORWARD -3.8741 0.71991 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47484 1.21485 1.25825 1.65926 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 3.30705 0.14631 3.36166 2.73626 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:31:11 2012 NSEQ 5 EFFN 3.325195 CKSUM 4104835367 STATS LOCAL MSV -8.0530 0.71934 STATS LOCAL VITERBI -7.8360 0.71934 STATS LOCAL FORWARD -4.2727 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40144 1.29150 1.38068 1.48064 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 0.00000 * 1 3.43404 0.13010 3.48346 2.82967 1 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 2 0.14179 3.38107 2.80245 3.28281 2 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 3 0.14179 3.38107 2.80245 3.28281 3 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 4 3.43404 0.13010 3.48346 2.82967 4 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 5 3.43404 0.13010 3.48346 2.82967 5 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 6 0.14179 3.38107 2.80245 3.28281 6 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 7 2.94809 3.58857 0.11707 3.49333 7 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 8 2.43340 0.73754 2.50592 1.04307 8 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 9 0.14179 3.38107 2.80245 3.28281 9 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 10 2.94809 3.58857 0.11707 3.49333 10 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 11 3.43404 0.13010 3.48346 2.82967 11 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 12 2.94809 3.58857 0.11707 3.49333 12 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 13 3.08942 2.59566 3.13755 0.17855 13 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 14 3.08942 2.59566 3.13755 0.17855 14 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 15 2.94809 3.58857 0.11707 3.49333 15 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 16 2.94809 3.58857 0.11707 3.49333 16 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 17 0.14179 3.38107 2.80245 3.28281 17 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 18 3.08942 2.59566 3.13755 0.17855 18 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 19 3.43404 0.13010 3.48346 2.82967 19 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 20 3.43404 0.13010 3.48346 2.82967 20 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 21 3.43404 0.13010 3.48346 2.82967 21 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 22 3.08942 2.59566 3.13755 0.17855 22 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 23 3.08942 2.59566 3.13755 0.17855 23 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 24 2.94809 3.58857 0.11707 3.49333 24 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 25 2.94809 3.58857 0.11707 3.49333 25 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 26 3.43404 0.13010 3.48346 2.82967 26 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 27 0.14179 3.38107 2.80245 3.28281 27 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 28 3.08942 2.59566 3.13755 0.17855 28 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 29 2.94809 3.58857 0.11707 3.49333 29 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 30 3.08942 2.59566 3.13755 0.17855 30 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 31 3.43404 0.13010 3.48346 2.82967 31 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 32 0.14179 3.38107 2.80245 3.28281 32 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 33 3.08942 2.59566 3.13755 0.17855 33 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 34 3.08942 2.59566 3.13755 0.17855 34 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 35 3.43404 0.13010 3.48346 2.82967 35 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 36 2.94809 3.58857 0.11707 3.49333 36 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 37 0.14179 3.38107 2.80245 3.28281 37 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 38 3.08942 2.59566 3.13755 0.17855 38 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 39 2.94809 3.58857 0.11707 3.49333 39 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 40 0.14179 3.38107 2.80245 3.28281 40 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 41 0.14179 3.38107 2.80245 3.28281 41 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 42 2.94809 3.58857 0.11707 3.49333 42 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 43 0.14179 3.38107 2.80245 3.28281 43 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 44 3.43404 0.13010 3.48346 2.82967 44 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 45 3.43404 0.13010 3.48346 2.82967 45 - - 1.38629 1.38629 1.38629 1.38629 0.01860 3.99364 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:31:54 2012 NSEQ 8 EFFN 3.214844 CKSUM 337714392 STATS LOCAL MSV -8.2169 0.71931 STATS LOCAL VITERBI -7.9769 0.71931 STATS LOCAL FORWARD -4.3014 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33893 1.32649 1.38153 1.50836 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 3.39256 0.13515 3.44371 2.79938 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 0.14663 3.34511 2.77903 3.24347 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 0.14663 3.34511 2.77903 3.24347 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 3.39256 0.13515 3.44371 2.79938 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 3.05326 2.57263 3.10276 0.18448 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 2.92285 3.55196 0.12115 3.45295 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 2.92285 3.55196 0.12115 3.45295 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 3.05326 2.57263 3.10276 0.18448 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 0.14663 3.34511 2.77903 3.24347 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 2.92285 3.55196 0.12115 3.45295 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 3.39256 0.13515 3.44371 2.79938 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 0.14663 3.34511 2.77903 3.24347 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 3.05326 2.57263 3.10276 0.18448 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.05326 2.57263 3.10276 0.18448 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 2.92285 3.55196 0.12115 3.45295 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 2.92285 3.55196 0.12115 3.45295 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 0.14663 3.34511 2.77903 3.24347 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 3.05326 2.57263 3.10276 0.18448 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 3.39256 0.13515 3.44371 2.79938 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 3.39256 0.13515 3.44371 2.79938 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 3.39256 0.13515 3.44371 2.79938 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 3.05326 2.57263 3.10276 0.18448 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 3.05326 2.57263 3.10276 0.18448 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 2.92285 3.55196 0.12115 3.45295 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 2.92285 3.55196 0.12115 3.45295 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.39256 0.13515 3.44371 2.79938 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 0.14663 3.34511 2.77903 3.24347 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 2.92285 3.55196 0.12115 3.45295 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.39256 0.13515 3.44371 2.79938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 3.39256 0.13515 3.44371 2.79938 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 0.14663 3.34511 2.77903 3.24347 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.05326 2.57263 3.10276 0.18448 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 3.05326 2.57263 3.10276 0.18448 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 3.39256 0.13515 3.44371 2.79938 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 2.92285 3.55196 0.12115 3.45295 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 0.14663 3.34511 2.77903 3.24347 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.05326 2.57263 3.10276 0.18448 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 2.92285 3.55196 0.12115 3.45295 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 0.14663 3.34511 2.77903 3.24347 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 0.14663 3.34511 2.77903 3.24347 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 2.92285 3.55196 0.12115 3.45295 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 0.14663 3.34511 2.77903 3.24347 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 0.14663 3.34511 2.77903 3.24347 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 3.39256 0.13515 3.44371 2.79938 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:21 2012 NSEQ 72 EFFN 3.159668 CKSUM 3342517671 STATS LOCAL MSV -8.0869 0.71932 STATS LOCAL VITERBI -7.8283 0.71932 STATS LOCAL FORWARD -4.2649 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55209 1.20895 1.25867 1.58157 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 0.00000 * 1 3.37120 0.13784 3.42324 2.78371 1 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 2 0.14919 3.32663 2.76694 3.22326 2 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 3 0.14919 3.32663 2.76694 3.22326 3 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 4 3.37120 0.13784 3.42324 2.78371 4 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 5 3.37120 0.13784 3.42324 2.78371 5 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 6 2.90973 3.53305 0.12333 3.43212 6 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 7 2.90973 3.53305 0.12333 3.43212 7 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 8 3.37120 0.13784 3.42324 2.78371 8 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 9 2.90973 3.53305 0.12333 3.43212 9 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 10 2.90973 3.53305 0.12333 3.43212 10 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 11 3.37120 0.13784 3.42324 2.78371 11 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 12 2.90973 3.53305 0.12333 3.43212 12 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 13 3.03479 2.56084 3.08498 0.18760 13 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 14 3.03479 2.56084 3.08498 0.18760 14 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 15 2.90973 3.53305 0.12333 3.43212 15 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 16 2.90973 3.53305 0.12333 3.43212 16 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 17 0.14919 3.32663 2.76694 3.22326 17 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 18 3.03479 2.56084 3.08498 0.18760 18 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 19 3.37120 0.13784 3.42324 2.78371 19 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 20 3.37120 0.13784 3.42324 2.78371 20 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 21 3.37120 0.13784 3.42324 2.78371 21 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 22 3.03479 2.56084 3.08498 0.18760 22 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 23 3.03479 2.56084 3.08498 0.18760 23 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 24 2.90973 3.53305 0.12333 3.43212 24 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 25 2.90973 3.53305 0.12333 3.43212 25 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 26 3.37120 0.13784 3.42324 2.78371 26 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 27 0.14919 3.32663 2.76694 3.22326 27 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 28 3.37120 0.13784 3.42324 2.78371 28 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 29 2.90973 3.53305 0.12333 3.43212 29 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 30 3.03479 2.56084 3.08498 0.18760 30 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 31 3.37120 0.13784 3.42324 2.78371 31 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 32 0.14919 3.32663 2.76694 3.22326 32 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 33 3.03479 2.56084 3.08498 0.18760 33 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 34 3.03479 2.56084 3.08498 0.18760 34 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 35 3.37120 0.13784 3.42324 2.78371 35 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 36 2.90973 3.53305 0.12333 3.43212 36 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 37 0.14919 3.32663 2.76694 3.22326 37 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 38 3.03479 2.56084 3.08498 0.18760 38 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 39 2.90973 3.53305 0.12333 3.43212 39 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 40 0.14919 3.32663 2.76694 3.22326 40 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 41 0.14919 3.32663 2.76694 3.22326 41 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 42 2.90973 3.53305 0.12333 3.43212 42 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 43 0.14919 3.32663 2.76694 3.22326 43 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 44 3.37120 0.13784 3.42324 2.78371 44 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98149 3.98149 1.46634 0.26236 1.09861 0.40547 45 3.37120 0.13784 3.42324 2.78371 45 - - 1.38629 1.38629 1.38629 1.38629 0.01920 3.96265 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:14 2012 NSEQ 21 EFFN 3.181274 CKSUM 4197352722 STATS LOCAL MSV -8.0600 0.71932 STATS LOCAL VITERBI -7.8099 0.71932 STATS LOCAL FORWARD -4.2440 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55111 1.26477 1.25764 1.50797 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 0.00000 * 1 3.37961 0.13677 3.43131 2.78989 1 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 2 0.14817 3.33390 2.77171 3.23122 2 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 3 0.14817 3.33390 2.77171 3.23122 3 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 4 3.37961 0.13677 3.43131 2.78989 4 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 5 3.37961 0.13677 3.43131 2.78989 5 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 6 2.91491 3.54050 0.12246 3.44033 6 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 7 2.91491 3.54050 0.12246 3.44033 7 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 8 3.04205 2.56548 3.09198 0.18637 8 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 9 2.91491 3.54050 0.12246 3.44033 9 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 10 2.91491 3.54050 0.12246 3.44033 10 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 11 3.37961 0.13677 3.43131 2.78989 11 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 12 2.91491 3.54050 0.12246 3.44033 12 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 13 3.04205 2.56548 3.09198 0.18637 13 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 14 3.04205 2.56548 3.09198 0.18637 14 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 15 2.91491 3.54050 0.12246 3.44033 15 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 16 2.91491 3.54050 0.12246 3.44033 16 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 17 0.14817 3.33390 2.77171 3.23122 17 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 18 3.04205 2.56548 3.09198 0.18637 18 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 19 3.37961 0.13677 3.43131 2.78989 19 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 20 3.37961 0.13677 3.43131 2.78989 20 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 21 3.37961 0.13677 3.43131 2.78989 21 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 22 3.04205 2.56548 3.09198 0.18637 22 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 23 3.04205 2.56548 3.09198 0.18637 23 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 24 2.91491 3.54050 0.12246 3.44033 24 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 25 2.91491 3.54050 0.12246 3.44033 25 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 26 3.37961 0.13677 3.43131 2.78989 26 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 27 0.14817 3.33390 2.77171 3.23122 27 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 28 3.37961 0.13677 3.43131 2.78989 28 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 29 2.91491 3.54050 0.12246 3.44033 29 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 30 3.04205 2.56548 3.09198 0.18637 30 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 31 3.37961 0.13677 3.43131 2.78989 31 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 32 0.14817 3.33390 2.77171 3.23122 32 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 33 3.04205 2.56548 3.09198 0.18637 33 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 34 3.04205 2.56548 3.09198 0.18637 34 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 35 3.37961 0.13677 3.43131 2.78989 35 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 36 2.91491 3.54050 0.12246 3.44033 36 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 37 0.14817 3.33390 2.77171 3.23122 37 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 38 3.04205 2.56548 3.09198 0.18637 38 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 39 2.91491 3.54050 0.12246 3.44033 39 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 40 0.14817 3.33390 2.77171 3.23122 40 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 41 0.14817 3.33390 2.77171 3.23122 41 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 42 2.91491 3.54050 0.12246 3.44033 42 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 43 0.14817 3.33390 2.77171 3.23122 43 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 44 3.37961 0.13677 3.43131 2.78989 44 - - 1.38629 1.38629 1.38629 1.38629 0.03787 3.98551 3.98551 1.46634 0.26236 1.09861 0.40547 45 3.37961 0.13677 3.43131 2.78989 45 - - 1.38629 1.38629 1.38629 1.38629 0.01912 3.96675 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:31:45 2012 NSEQ 60 EFFN 3.226318 CKSUM 2989335639 STATS LOCAL MSV -8.0127 0.71932 STATS LOCAL VITERBI -7.7542 0.71932 STATS LOCAL FORWARD -4.3740 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27747 1.32550 1.45124 1.50820 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 0.00000 * 1 3.39694 0.13461 3.44792 2.80260 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 2 0.14611 3.34891 2.78151 3.24762 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 3 0.14611 3.34891 2.78151 3.24762 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 4 3.39694 0.13461 3.44792 2.80260 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 5 3.39694 0.13461 3.44792 2.80260 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 6 2.92553 3.55584 0.12071 3.45723 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 7 2.92553 3.55584 0.12071 3.45723 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 8 3.05707 2.57506 3.10643 0.18384 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 9 0.14611 3.34891 2.78151 3.24762 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 10 2.92553 3.55584 0.12071 3.45723 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 11 3.39694 0.13461 3.44792 2.80260 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 12 0.14611 3.34891 2.78151 3.24762 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 13 3.05707 2.57506 3.10643 0.18384 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 14 3.05707 2.57506 3.10643 0.18384 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 15 2.92553 3.55584 0.12071 3.45723 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 16 2.92553 3.55584 0.12071 3.45723 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 17 0.14611 3.34891 2.78151 3.24762 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 18 3.05707 2.57506 3.10643 0.18384 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 19 3.39694 0.13461 3.44792 2.80260 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 20 3.39694 0.13461 3.44792 2.80260 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 21 3.39694 0.13461 3.44792 2.80260 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 22 3.05707 2.57506 3.10643 0.18384 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 23 3.05707 2.57506 3.10643 0.18384 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 24 2.92553 3.55584 0.12071 3.45723 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 25 2.92553 3.55584 0.12071 3.45723 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 26 3.39694 0.13461 3.44792 2.80260 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 27 0.14611 3.34891 2.78151 3.24762 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 28 3.39694 0.13461 3.44792 2.80260 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 29 0.14611 3.34891 2.78151 3.24762 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 30 3.05707 2.57506 3.10643 0.18384 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 31 3.39694 0.13461 3.44792 2.80260 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 32 0.14611 3.34891 2.78151 3.24762 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 33 3.05707 2.57506 3.10643 0.18384 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 34 3.05707 2.57506 3.10643 0.18384 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 35 3.39694 0.13461 3.44792 2.80260 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 36 2.92553 3.55584 0.12071 3.45723 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 37 0.14611 3.34891 2.78151 3.24762 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 38 3.05707 2.57506 3.10643 0.18384 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 39 2.92553 3.55584 0.12071 3.45723 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 40 0.14611 3.34891 2.78151 3.24762 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 41 0.14611 3.34891 2.78151 3.24762 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 42 2.92553 3.55584 0.12071 3.45723 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 43 0.14611 3.34891 2.78151 3.24762 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 44 0.14611 3.34891 2.78151 3.24762 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99385 3.99385 1.46634 0.26236 1.09861 0.40547 45 3.39694 0.13461 3.44792 2.80260 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97525 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:59 2012 NSEQ 15 EFFN 3.262939 CKSUM 2354692577 STATS LOCAL MSV -8.0495 0.71933 STATS LOCAL VITERBI -7.7670 0.71933 STATS LOCAL FORWARD -4.2451 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.46726 1.26148 1.33110 1.50498 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 0.00000 * 1 3.41083 0.13290 3.46123 2.81275 1 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 2 0.14447 3.36094 2.78936 3.26079 2 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 3 0.14447 3.36094 2.78936 3.26079 3 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 4 3.41083 0.13290 3.46123 2.81275 4 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 5 3.41083 0.13290 3.46123 2.81275 5 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 6 2.93400 3.56812 0.11933 3.47076 6 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 7 2.93400 3.56812 0.11933 3.47076 7 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 8 3.06915 2.58276 3.11805 0.18185 8 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 9 0.14447 3.36094 2.78936 3.26079 9 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 10 2.93400 3.56812 0.11933 3.47076 10 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 11 3.41083 0.13290 3.46123 2.81275 11 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 12 2.93400 3.56812 0.11933 3.47076 12 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 13 3.06915 2.58276 3.11805 0.18185 13 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 14 3.06915 2.58276 3.11805 0.18185 14 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 15 2.93400 3.56812 0.11933 3.47076 15 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 16 2.93400 3.56812 0.11933 3.47076 16 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 17 0.14447 3.36094 2.78936 3.26079 17 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 18 3.06915 2.58276 3.11805 0.18185 18 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 19 3.41083 0.13290 3.46123 2.81275 19 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 20 3.41083 0.13290 3.46123 2.81275 20 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 21 3.41083 0.13290 3.46123 2.81275 21 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 22 3.06915 2.58276 3.11805 0.18185 22 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 23 3.06915 2.58276 3.11805 0.18185 23 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 24 2.93400 3.56812 0.11933 3.47076 24 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 25 2.93400 3.56812 0.11933 3.47076 25 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 26 3.41083 0.13290 3.46123 2.81275 26 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 27 0.14447 3.36094 2.78936 3.26079 27 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 28 3.41083 0.13290 3.46123 2.81275 28 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 29 1.84895 2.92963 0.31711 2.79804 29 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 30 3.06915 2.58276 3.11805 0.18185 30 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 31 3.41083 0.13290 3.46123 2.81275 31 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 32 0.14447 3.36094 2.78936 3.26079 32 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 33 3.06915 2.58276 3.11805 0.18185 33 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 34 3.06915 2.58276 3.11805 0.18185 34 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 35 3.41083 0.13290 3.46123 2.81275 35 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 36 2.93400 3.56812 0.11933 3.47076 36 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 37 0.14447 3.36094 2.78936 3.26079 37 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 38 3.06915 2.58276 3.11805 0.18185 38 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 39 2.93400 3.56812 0.11933 3.47076 39 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 40 0.14447 3.36094 2.78936 3.26079 40 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 41 0.14447 3.36094 2.78936 3.26079 41 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 42 2.93400 3.56812 0.11933 3.47076 42 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 43 0.14447 3.36094 2.78936 3.26079 43 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 44 3.41083 0.13290 3.46123 2.81275 44 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 45 3.41083 0.13290 3.46123 2.81275 45 - - 1.38629 1.38629 1.38629 1.38629 0.01882 3.98210 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:32 2012 NSEQ 7 EFFN 3.188965 CKSUM 3673879589 STATS LOCAL MSV -8.0297 0.71932 STATS LOCAL VITERBI -7.7429 0.71932 STATS LOCAL FORWARD -4.0892 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47412 1.32732 1.25550 1.51004 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 0.00000 * 1 3.38259 0.13640 3.43416 2.79207 1 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 2 0.14782 3.33648 2.77339 3.23404 2 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 3 0.14782 3.33648 2.77339 3.23404 3 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 4 3.38259 0.13640 3.43416 2.79207 4 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 5 3.38259 0.13640 3.43416 2.79207 5 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 6 2.91674 3.54314 0.12216 3.44323 6 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 7 2.91674 3.54314 0.12216 3.44323 7 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 8 3.04463 2.56713 3.09446 0.18593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 9 0.14782 3.33648 2.77339 3.23404 9 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 10 2.91674 3.54314 0.12216 3.44323 10 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 11 3.38259 0.13640 3.43416 2.79207 11 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 12 2.91674 3.54314 0.12216 3.44323 12 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 13 3.04463 2.56713 3.09446 0.18593 13 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 14 3.04463 2.56713 3.09446 0.18593 14 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 15 2.91674 3.54314 0.12216 3.44323 15 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 16 2.91674 3.54314 0.12216 3.44323 16 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 17 0.14782 3.33648 2.77339 3.23404 17 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 18 3.04463 2.56713 3.09446 0.18593 18 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 19 3.38259 0.13640 3.43416 2.79207 19 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 20 3.38259 0.13640 3.43416 2.79207 20 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 21 3.38259 0.13640 3.43416 2.79207 21 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 22 3.04463 2.56713 3.09446 0.18593 22 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 23 3.04463 2.56713 3.09446 0.18593 23 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 24 2.91674 3.54314 0.12216 3.44323 24 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 25 2.91674 3.54314 0.12216 3.44323 25 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 26 3.38259 0.13640 3.43416 2.79207 26 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 27 0.14782 3.33648 2.77339 3.23404 27 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 28 3.38259 0.13640 3.43416 2.79207 28 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 29 2.91674 3.54314 0.12216 3.44323 29 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 30 3.04463 2.56713 3.09446 0.18593 30 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 31 3.04463 2.56713 3.09446 0.18593 31 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 32 2.91674 3.54314 0.12216 3.44323 32 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 33 0.14782 3.33648 2.77339 3.23404 33 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 34 3.04463 2.56713 3.09446 0.18593 34 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 35 3.38259 0.13640 3.43416 2.79207 35 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 36 2.91674 3.54314 0.12216 3.44323 36 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 37 0.14782 3.33648 2.77339 3.23404 37 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 38 3.04463 2.56713 3.09446 0.18593 38 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 39 2.91674 3.54314 0.12216 3.44323 39 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 40 0.14782 3.33648 2.77339 3.23404 40 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 41 0.14782 3.33648 2.77339 3.23404 41 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 42 2.91674 3.54314 0.12216 3.44323 42 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 43 0.14782 3.33648 2.77339 3.23404 43 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 44 3.38259 0.13640 3.43416 2.79207 44 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 45 3.38259 0.13640 3.43416 2.79207 45 - - 1.38629 1.38629 1.38629 1.38629 0.01909 3.96821 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:29:50 2012 NSEQ 160 EFFN 3.178711 CKSUM 3813106490 STATS LOCAL MSV -8.0854 0.71932 STATS LOCAL VITERBI -7.7431 0.71932 STATS LOCAL FORWARD -4.2930 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40538 1.26732 1.31745 1.58316 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 * 1 3.37862 0.13690 3.43035 2.78916 1 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 2 0.14829 3.33304 2.77114 3.23028 2 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 3 0.14829 3.33304 2.77114 3.23028 3 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 4 3.37862 0.13690 3.43035 2.78916 4 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 5 3.37862 0.13690 3.43035 2.78916 5 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 6 2.91430 3.53962 0.12257 3.43936 6 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 7 2.91430 3.53962 0.12257 3.43936 7 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 8 3.04119 2.56493 3.09115 0.18651 8 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 9 0.14829 3.33304 2.77114 3.23028 9 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 10 2.91430 3.53962 0.12257 3.43936 10 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 11 3.37862 0.13690 3.43035 2.78916 11 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 12 2.91430 3.53962 0.12257 3.43936 12 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 13 0.14829 3.33304 2.77114 3.23028 13 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 14 3.04119 2.56493 3.09115 0.18651 14 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 15 2.91430 3.53962 0.12257 3.43936 15 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 16 2.91430 3.53962 0.12257 3.43936 16 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 17 0.14829 3.33304 2.77114 3.23028 17 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 18 3.04119 2.56493 3.09115 0.18651 18 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 19 3.37862 0.13690 3.43035 2.78916 19 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 20 3.37862 0.13690 3.43035 2.78916 20 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 21 3.37862 0.13690 3.43035 2.78916 21 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 22 3.04119 2.56493 3.09115 0.18651 22 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 23 3.04119 2.56493 3.09115 0.18651 23 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 24 2.91430 3.53962 0.12257 3.43936 24 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 25 2.91430 3.53962 0.12257 3.43936 25 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 26 3.37862 0.13690 3.43035 2.78916 26 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 27 0.14829 3.33304 2.77114 3.23028 27 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 28 3.37862 0.13690 3.43035 2.78916 28 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 29 2.91430 3.53962 0.12257 3.43936 29 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 30 3.04119 2.56493 3.09115 0.18651 30 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 31 3.37862 0.13690 3.43035 2.78916 31 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 32 0.14829 3.33304 2.77114 3.23028 32 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 33 3.04119 2.56493 3.09115 0.18651 33 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 34 3.04119 2.56493 3.09115 0.18651 34 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 35 3.37862 0.13690 3.43035 2.78916 35 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 36 2.91430 3.53962 0.12257 3.43936 36 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 37 0.14829 3.33304 2.77114 3.23028 37 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 38 3.04119 2.56493 3.09115 0.18651 38 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 39 2.91430 3.53962 0.12257 3.43936 39 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 40 0.14829 3.33304 2.77114 3.23028 40 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 41 0.14829 3.33304 2.77114 3.23028 41 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 42 2.91430 3.53962 0.12257 3.43936 42 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 43 0.14829 3.33304 2.77114 3.23028 43 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 44 3.37862 0.13690 3.43035 2.78916 44 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 45 3.37862 0.13690 3.43035 2.78916 45 - - 1.38629 1.38629 1.38629 1.38629 0.01913 3.96627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:38 2012 NSEQ 8 EFFN 3.191406 CKSUM 1958988569 STATS LOCAL MSV -8.0481 0.71933 STATS LOCAL VITERBI -7.8749 0.71933 STATS LOCAL FORWARD -4.1612 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47565 1.26416 1.31903 1.50734 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 0.00000 * 1 3.38354 0.13628 3.43507 2.79277 1 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 2 0.14770 3.33730 2.77393 3.23493 2 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 3 0.14770 3.33730 2.77393 3.23493 3 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 4 3.38354 0.13628 3.43507 2.79277 4 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 5 3.38354 0.13628 3.43507 2.79277 5 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 6 0.14770 3.33730 2.77393 3.23493 6 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 7 2.91732 3.54398 0.12206 3.44415 7 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 8 3.04545 2.56765 3.09524 0.18579 8 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 9 0.14770 3.33730 2.77393 3.23493 9 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 10 2.91732 3.54398 0.12206 3.44415 10 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 11 3.38354 0.13628 3.43507 2.79277 11 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 12 2.91732 3.54398 0.12206 3.44415 12 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 13 3.04545 2.56765 3.09524 0.18579 13 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 14 3.04545 2.56765 3.09524 0.18579 14 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 15 2.91732 3.54398 0.12206 3.44415 15 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 16 2.91732 3.54398 0.12206 3.44415 16 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 17 0.14770 3.33730 2.77393 3.23493 17 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 18 3.04545 2.56765 3.09524 0.18579 18 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 19 3.38354 0.13628 3.43507 2.79277 19 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 20 3.38354 0.13628 3.43507 2.79277 20 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 21 3.38354 0.13628 3.43507 2.79277 21 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 22 3.04545 2.56765 3.09524 0.18579 22 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 23 3.04545 2.56765 3.09524 0.18579 23 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 24 2.91732 3.54398 0.12206 3.44415 24 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 25 2.91732 3.54398 0.12206 3.44415 25 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 26 3.38354 0.13628 3.43507 2.79277 26 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 27 0.14770 3.33730 2.77393 3.23493 27 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 28 3.38354 0.13628 3.43507 2.79277 28 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 29 2.91732 3.54398 0.12206 3.44415 29 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 30 3.04545 2.56765 3.09524 0.18579 30 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 31 3.38354 0.13628 3.43507 2.79277 31 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 32 2.91732 3.54398 0.12206 3.44415 32 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 33 3.04545 2.56765 3.09524 0.18579 33 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 34 3.04545 2.56765 3.09524 0.18579 34 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 35 3.38354 0.13628 3.43507 2.79277 35 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 36 2.91732 3.54398 0.12206 3.44415 36 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 37 0.14770 3.33730 2.77393 3.23493 37 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 38 3.04545 2.56765 3.09524 0.18579 38 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 39 2.91732 3.54398 0.12206 3.44415 39 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 40 0.14770 3.33730 2.77393 3.23493 40 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 41 0.14770 3.33730 2.77393 3.23493 41 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 42 2.91732 3.54398 0.12206 3.44415 42 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 43 0.14770 3.33730 2.77393 3.23493 43 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 44 3.38354 0.13628 3.43507 2.79277 44 - - 1.38629 1.38629 1.38629 1.38629 0.03780 3.98739 3.98739 1.46634 0.26236 1.09861 0.40547 45 3.38354 0.13628 3.43507 2.79277 45 - - 1.38629 1.38629 1.38629 1.38629 0.01908 3.96867 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:14 2012 NSEQ 28 EFFN 3.332520 CKSUM 3378749724 STATS LOCAL MSV -8.2298 0.71932 STATS LOCAL VITERBI -7.9126 0.71932 STATS LOCAL FORWARD -4.3878 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40152 1.29653 1.38029 1.47494 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 0.00000 * 1 3.43673 0.12978 3.48604 2.83163 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 2 0.14148 3.38341 2.80397 3.28537 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 3 0.14148 3.38341 2.80397 3.28537 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 4 3.43673 0.12978 3.48604 2.83163 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 5 3.09178 2.59716 3.13982 0.17817 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 6 2.94972 3.59095 0.11681 3.49595 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 7 2.94972 3.59095 0.11681 3.49595 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 8 3.09178 2.59716 3.13982 0.17817 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 9 0.14148 3.38341 2.80397 3.28537 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 10 2.94972 3.59095 0.11681 3.49595 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 11 3.43673 0.12978 3.48604 2.83163 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 12 0.14148 3.38341 2.80397 3.28537 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 13 3.09178 2.59716 3.13982 0.17817 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 14 3.09178 2.59716 3.13982 0.17817 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 15 2.94972 3.59095 0.11681 3.49595 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 16 2.94972 3.59095 0.11681 3.49595 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 17 0.14148 3.38341 2.80397 3.28537 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 18 3.09178 2.59716 3.13982 0.17817 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 19 3.43673 0.12978 3.48604 2.83163 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 20 3.43673 0.12978 3.48604 2.83163 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 21 3.43673 0.12978 3.48604 2.83163 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 22 3.09178 2.59716 3.13982 0.17817 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 23 3.09178 2.59716 3.13982 0.17817 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 24 2.94972 3.59095 0.11681 3.49595 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 25 2.94972 3.59095 0.11681 3.49595 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 26 3.43673 0.12978 3.48604 2.83163 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 27 0.14148 3.38341 2.80397 3.28537 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 28 2.40836 0.87702 2.48076 0.89078 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 29 2.94972 3.59095 0.11681 3.49595 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 30 3.43673 0.12978 3.48604 2.83163 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 31 3.43673 0.12978 3.48604 2.83163 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 32 0.14148 3.38341 2.80397 3.28537 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 33 3.09178 2.59716 3.13982 0.17817 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 34 3.09178 2.59716 3.13982 0.17817 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 35 3.43673 0.12978 3.48604 2.83163 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 36 2.94972 3.59095 0.11681 3.49595 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 37 0.14148 3.38341 2.80397 3.28537 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 38 3.09178 2.59716 3.13982 0.17817 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 39 2.94972 3.59095 0.11681 3.49595 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 40 0.14148 3.38341 2.80397 3.28537 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 41 0.14148 3.38341 2.80397 3.28537 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 42 2.94972 3.59095 0.11681 3.49595 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 43 0.14148 3.38341 2.80397 3.28537 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 44 3.43673 0.12978 3.48604 2.83163 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01323 4.01323 1.46634 0.26236 1.09861 0.40547 45 3.43673 0.12978 3.48604 2.83163 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99499 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:30 2012 NSEQ 15 EFFN 3.284912 CKSUM 4135553983 STATS LOCAL MSV -8.1380 0.71932 STATS LOCAL VITERBI -7.7888 0.71932 STATS LOCAL FORWARD -4.3147 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40354 1.27617 1.38197 1.49571 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 0.00000 * 1 3.41908 0.13189 3.46913 2.81877 1 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 2 0.14351 3.36809 2.79401 3.26861 2 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 3 0.14351 3.36809 2.79401 3.26861 3 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 4 3.41908 0.13189 3.46913 2.81877 4 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 5 3.41908 0.13189 3.46913 2.81877 5 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 6 2.93902 3.57539 0.11852 3.47878 6 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 7 2.93902 3.57539 0.11852 3.47878 7 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 8 3.07634 2.58734 3.12497 0.18067 8 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 9 0.14351 3.36809 2.79401 3.26861 9 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 10 2.93902 3.57539 0.11852 3.47878 10 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 11 3.41908 0.13189 3.46913 2.81877 11 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 12 0.14351 3.36809 2.79401 3.26861 12 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 13 3.07634 2.58734 3.12497 0.18067 13 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 14 3.07634 2.58734 3.12497 0.18067 14 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 15 2.93902 3.57539 0.11852 3.47878 15 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 16 2.93902 3.57539 0.11852 3.47878 16 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 17 0.14351 3.36809 2.79401 3.26861 17 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 18 3.07634 2.58734 3.12497 0.18067 18 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 19 3.41908 0.13189 3.46913 2.81877 19 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 20 3.41908 0.13189 3.46913 2.81877 20 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 21 3.41908 0.13189 3.46913 2.81877 21 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 22 3.07634 2.58734 3.12497 0.18067 22 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 23 3.07634 2.58734 3.12497 0.18067 23 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 24 2.93902 3.57539 0.11852 3.47878 24 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 25 2.93902 3.57539 0.11852 3.47878 25 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 26 3.41908 0.13189 3.46913 2.81877 26 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 27 0.14351 3.36809 2.79401 3.26861 27 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 28 2.73578 0.37069 2.80385 1.69108 28 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 29 2.93902 3.57539 0.11852 3.47878 29 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 30 3.07634 2.58734 3.12497 0.18067 30 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 31 3.41908 0.13189 3.46913 2.81877 31 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 32 0.14351 3.36809 2.79401 3.26861 32 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 33 3.07634 2.58734 3.12497 0.18067 33 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 34 3.07634 2.58734 3.12497 0.18067 34 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 35 3.41908 0.13189 3.46913 2.81877 35 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 36 2.93902 3.57539 0.11852 3.47878 36 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 37 0.14351 3.36809 2.79401 3.26861 37 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 38 3.07634 2.58734 3.12497 0.18067 38 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 39 2.93902 3.57539 0.11852 3.47878 39 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 40 0.14351 3.36809 2.79401 3.26861 40 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 41 0.14351 3.36809 2.79401 3.26861 41 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 42 2.93902 3.57539 0.11852 3.47878 42 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 43 0.14351 3.36809 2.79401 3.26861 43 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 44 3.41908 0.13189 3.46913 2.81877 44 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00459 4.00459 1.46634 0.26236 1.09861 0.40547 45 3.41908 0.13189 3.46913 2.81877 45 - - 1.38629 1.38629 1.38629 1.38629 0.01874 3.98619 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:03 2012 NSEQ 6 EFFN 3.237305 CKSUM 1798337281 STATS LOCAL MSV -8.1605 0.71932 STATS LOCAL VITERBI -7.7756 0.71932 STATS LOCAL FORWARD -4.0916 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40649 1.25981 1.45598 1.43500 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 0.00000 * 1 3.40113 0.13409 3.45193 2.80566 1 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 2 0.14561 3.35254 2.78388 3.25159 2 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 3 0.14561 3.35254 2.78388 3.25159 3 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 4 3.40113 0.13409 3.45193 2.80566 4 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 5 3.06071 2.57738 3.10992 0.18324 5 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 6 3.40113 0.13409 3.45193 2.80566 6 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 7 0.14561 3.35254 2.78388 3.25159 7 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 8 3.06071 2.57738 3.10992 0.18324 8 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 9 0.14561 3.35254 2.78388 3.25159 9 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 10 2.92809 3.55954 0.12029 3.46131 10 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 11 3.40113 0.13409 3.45193 2.80566 11 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 12 2.92809 3.55954 0.12029 3.46131 12 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 13 3.06071 2.57738 3.10992 0.18324 13 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 14 3.06071 2.57738 3.10992 0.18324 14 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 15 2.92809 3.55954 0.12029 3.46131 15 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 16 2.92809 3.55954 0.12029 3.46131 16 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 17 0.14561 3.35254 2.78388 3.25159 17 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 18 3.06071 2.57738 3.10992 0.18324 18 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 19 3.40113 0.13409 3.45193 2.80566 19 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 20 3.40113 0.13409 3.45193 2.80566 20 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 21 3.40113 0.13409 3.45193 2.80566 21 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 22 3.06071 2.57738 3.10992 0.18324 22 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 23 3.06071 2.57738 3.10992 0.18324 23 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 24 2.92809 3.55954 0.12029 3.46131 24 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 25 2.92809 3.55954 0.12029 3.46131 25 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 26 3.40113 0.13409 3.45193 2.80566 26 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 27 0.14561 3.35254 2.78388 3.25159 27 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 28 3.06071 2.57738 3.10992 0.18324 28 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 29 2.92809 3.55954 0.12029 3.46131 29 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 30 3.40113 0.13409 3.45193 2.80566 30 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 31 3.40113 0.13409 3.45193 2.80566 31 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 32 0.14561 3.35254 2.78388 3.25159 32 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 33 3.06071 2.57738 3.10992 0.18324 33 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 34 3.06071 2.57738 3.10992 0.18324 34 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 35 3.40113 0.13409 3.45193 2.80566 35 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 36 2.92809 3.55954 0.12029 3.46131 36 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 37 0.14561 3.35254 2.78388 3.25159 37 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 38 3.06071 2.57738 3.10992 0.18324 38 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 39 2.92809 3.55954 0.12029 3.46131 39 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 40 0.14561 3.35254 2.78388 3.25159 40 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 41 0.14561 3.35254 2.78388 3.25159 41 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 42 2.92809 3.55954 0.12029 3.46131 42 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 43 0.14561 3.35254 2.78388 3.25159 43 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 44 3.40113 0.13409 3.45193 2.80566 44 - - 1.38629 1.38629 1.38629 1.38629 0.03748 3.99587 3.99587 1.46634 0.26236 1.09861 0.40547 45 3.40113 0.13409 3.45193 2.80566 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97731 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:31:33 2012 NSEQ 5 EFFN 3.198242 CKSUM 4258578240 STATS LOCAL MSV -8.0481 0.71931 STATS LOCAL VITERBI -7.8734 0.71931 STATS LOCAL FORWARD -4.1637 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47571 1.26408 1.31903 1.50738 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 0.00000 * 1 3.38618 0.13595 3.43760 2.79470 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 2 0.14739 3.33958 2.77542 3.23743 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 3 0.14739 3.33958 2.77542 3.23743 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 4 3.38618 0.13595 3.43760 2.79470 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 5 3.38618 0.13595 3.43760 2.79470 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 6 0.14739 3.33958 2.77542 3.23743 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 7 2.91894 3.54631 0.12180 3.44673 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 8 3.04773 2.56910 3.09744 0.18541 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 9 0.14739 3.33958 2.77542 3.23743 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 10 2.91894 3.54631 0.12180 3.44673 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 11 3.38618 0.13595 3.43760 2.79470 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 12 2.91894 3.54631 0.12180 3.44673 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 13 3.04773 2.56910 3.09744 0.18541 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 14 3.04773 2.56910 3.09744 0.18541 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 15 2.91894 3.54631 0.12180 3.44673 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 16 2.91894 3.54631 0.12180 3.44673 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 17 0.14739 3.33958 2.77542 3.23743 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 18 3.04773 2.56910 3.09744 0.18541 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 19 3.38618 0.13595 3.43760 2.79470 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 20 3.38618 0.13595 3.43760 2.79470 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 21 3.38618 0.13595 3.43760 2.79470 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 22 3.04773 2.56910 3.09744 0.18541 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 23 3.04773 2.56910 3.09744 0.18541 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 24 2.91894 3.54631 0.12180 3.44673 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 25 2.91894 3.54631 0.12180 3.44673 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 26 3.38618 0.13595 3.43760 2.79470 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 27 0.14739 3.33958 2.77542 3.23743 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 28 3.38618 0.13595 3.43760 2.79470 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 29 2.91894 3.54631 0.12180 3.44673 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 30 3.04773 2.56910 3.09744 0.18541 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 31 3.38618 0.13595 3.43760 2.79470 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 32 2.91894 3.54631 0.12180 3.44673 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 33 3.04773 2.56910 3.09744 0.18541 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 34 3.04773 2.56910 3.09744 0.18541 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 35 3.38618 0.13595 3.43760 2.79470 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 36 2.91894 3.54631 0.12180 3.44673 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 37 0.14739 3.33958 2.77542 3.23743 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 38 3.04773 2.56910 3.09744 0.18541 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 39 2.91894 3.54631 0.12180 3.44673 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 40 0.14739 3.33958 2.77542 3.23743 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 41 0.14739 3.33958 2.77542 3.23743 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 42 2.91894 3.54631 0.12180 3.44673 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 43 0.14739 3.33958 2.77542 3.23743 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 44 3.38618 0.13595 3.43760 2.79470 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 45 3.38618 0.13595 3.43760 2.79470 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.96996 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:38 2012 NSEQ 2 EFFN 2.000000 CKSUM 1280679085 STATS LOCAL MSV -7.5499 0.72821 STATS LOCAL VITERBI -8.1157 0.72821 STATS LOCAL FORWARD -3.4558 0.72821 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29089 1.28500 1.57069 1.42537 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_thirtyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:45 2012 NSEQ 2 EFFN 2.000000 CKSUM 1404587952 STATS LOCAL MSV -7.4845 0.72803 STATS LOCAL VITERBI -8.1976 0.72803 STATS LOCAL FORWARD -3.3149 0.72803 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39991 1.28635 1.43924 1.42714 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:35:01 2012 NSEQ 9 EFFN 3.186035 CKSUM 2146092560 STATS LOCAL MSV -8.0705 0.71931 STATS LOCAL VITERBI -7.9741 0.71931 STATS LOCAL FORWARD -4.0826 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55116 1.26470 1.25788 1.50770 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 0.00000 * 1 3.38146 0.13654 3.43308 2.79124 1 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 2 0.14795 3.33550 2.77275 3.23296 2 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 3 0.14795 3.33550 2.77275 3.23296 3 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 4 3.38146 0.13654 3.43308 2.79124 4 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 5 3.38146 0.13654 3.43308 2.79124 5 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 6 3.04365 2.56650 3.09351 0.18610 6 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 7 2.91604 3.54214 0.12228 3.44213 7 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 8 3.04365 2.56650 3.09351 0.18610 8 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 9 2.91604 3.54214 0.12228 3.44213 9 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 10 2.91604 3.54214 0.12228 3.44213 10 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 11 3.38146 0.13654 3.43308 2.79124 11 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 12 0.14795 3.33550 2.77275 3.23296 12 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 13 3.04365 2.56650 3.09351 0.18610 13 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 14 3.04365 2.56650 3.09351 0.18610 14 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 15 2.91604 3.54214 0.12228 3.44213 15 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 16 2.91604 3.54214 0.12228 3.44213 16 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 17 0.14795 3.33550 2.77275 3.23296 17 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 18 3.04365 2.56650 3.09351 0.18610 18 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 19 3.38146 0.13654 3.43308 2.79124 19 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 20 3.38146 0.13654 3.43308 2.79124 20 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 21 3.38146 0.13654 3.43308 2.79124 21 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 22 3.04365 2.56650 3.09351 0.18610 22 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 23 3.04365 2.56650 3.09351 0.18610 23 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 24 2.91604 3.54214 0.12228 3.44213 24 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 25 2.91604 3.54214 0.12228 3.44213 25 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 26 3.38146 0.13654 3.43308 2.79124 26 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 27 0.14795 3.33550 2.77275 3.23296 27 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 28 3.38146 0.13654 3.43308 2.79124 28 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 29 2.91604 3.54214 0.12228 3.44213 29 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 30 3.38146 0.13654 3.43308 2.79124 30 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 31 3.38146 0.13654 3.43308 2.79124 31 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 32 2.91604 3.54214 0.12228 3.44213 32 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 33 3.04365 2.56650 3.09351 0.18610 33 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 34 3.04365 2.56650 3.09351 0.18610 34 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 35 3.38146 0.13654 3.43308 2.79124 35 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 36 2.91604 3.54214 0.12228 3.44213 36 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 37 0.14795 3.33550 2.77275 3.23296 37 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 38 3.04365 2.56650 3.09351 0.18610 38 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 39 2.91604 3.54214 0.12228 3.44213 39 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 40 0.14795 3.33550 2.77275 3.23296 40 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 41 0.14795 3.33550 2.77275 3.23296 41 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 42 2.91604 3.54214 0.12228 3.44213 42 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 43 0.14795 3.33550 2.77275 3.23296 43 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 44 2.91604 3.54214 0.12228 3.44213 44 - - 1.38629 1.38629 1.38629 1.38629 0.03784 3.98639 3.98639 1.46634 0.26236 1.09861 0.40547 45 3.38146 0.13654 3.43308 2.79124 45 - - 1.38629 1.38629 1.38629 1.38629 0.01910 3.96765 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:53 2012 NSEQ 2 EFFN 2.000000 CKSUM 1740124319 STATS LOCAL MSV -7.3000 0.72807 STATS LOCAL VITERBI -8.0977 0.72807 STATS LOCAL FORWARD -3.2928 0.72807 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19324 1.23913 1.64333 1.54276 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:30:05 2012 NSEQ 190 EFFN 3.174591 CKSUM 2393398619 STATS LOCAL MSV -8.0249 0.71931 STATS LOCAL VITERBI -7.7396 0.71931 STATS LOCAL FORWARD -4.1980 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47702 1.20832 1.31976 1.58092 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 0.00000 * 1 3.37702 0.13710 3.42882 2.78798 1 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 2 0.14849 3.33166 2.77024 3.22876 2 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 3 0.14849 3.33166 2.77024 3.22876 3 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 4 3.37702 0.13710 3.42882 2.78798 4 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 5 3.37702 0.13710 3.42882 2.78798 5 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 6 2.91331 3.53820 0.12273 3.43779 6 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 7 2.91331 3.53820 0.12273 3.43779 7 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 8 3.03981 2.56405 3.08982 0.18675 8 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 9 0.14849 3.33166 2.77024 3.22876 9 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 10 2.91331 3.53820 0.12273 3.43779 10 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 11 3.37702 0.13710 3.42882 2.78798 11 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 12 2.91331 3.53820 0.12273 3.43779 12 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 13 3.37702 0.13710 3.42882 2.78798 13 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 14 3.03981 2.56405 3.08982 0.18675 14 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 15 2.91331 3.53820 0.12273 3.43779 15 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 16 2.91331 3.53820 0.12273 3.43779 16 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 17 0.14849 3.33166 2.77024 3.22876 17 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 18 3.03981 2.56405 3.08982 0.18675 18 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 19 3.37702 0.13710 3.42882 2.78798 19 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 20 3.37702 0.13710 3.42882 2.78798 20 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 21 3.37702 0.13710 3.42882 2.78798 21 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 22 3.03981 2.56405 3.08982 0.18675 22 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 23 3.03981 2.56405 3.08982 0.18675 23 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 24 2.91331 3.53820 0.12273 3.43779 24 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 25 2.91331 3.53820 0.12273 3.43779 25 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 26 3.37702 0.13710 3.42882 2.78798 26 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 27 0.14849 3.33166 2.77024 3.22876 27 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 28 3.37702 0.13710 3.42882 2.78798 28 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 29 2.91331 3.53820 0.12273 3.43779 29 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 30 3.03981 2.56405 3.08982 0.18675 30 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 31 3.37702 0.13710 3.42882 2.78798 31 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 32 0.14849 3.33166 2.77024 3.22876 32 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 33 3.03981 2.56405 3.08982 0.18675 33 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 34 3.03981 2.56405 3.08982 0.18675 34 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 35 3.37702 0.13710 3.42882 2.78798 35 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 36 2.91331 3.53820 0.12273 3.43779 36 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 37 0.14849 3.33166 2.77024 3.22876 37 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 38 3.03981 2.56405 3.08982 0.18675 38 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 39 2.91331 3.53820 0.12273 3.43779 39 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 40 0.14849 3.33166 2.77024 3.22876 40 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 41 0.14849 3.33166 2.77024 3.22876 41 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 42 2.91331 3.53820 0.12273 3.43779 42 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 43 0.14849 3.33166 2.77024 3.22876 43 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 44 3.37702 0.13710 3.42882 2.78798 44 - - 1.38629 1.38629 1.38629 1.38629 0.03792 3.98427 3.98427 1.46634 0.26236 1.09861 0.40547 45 3.37702 0.13710 3.42882 2.78798 45 - - 1.38629 1.38629 1.38629 1.38629 0.01914 3.96549 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:31:20 2012 NSEQ 10 EFFN 3.247070 CKSUM 276171632 STATS LOCAL MSV -8.0864 0.71931 STATS LOCAL VITERBI -7.7588 0.71931 STATS LOCAL FORWARD -4.3267 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33910 1.32219 1.45330 1.43729 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 * 1 3.40484 0.13363 3.45549 2.80837 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 2 0.14518 3.35575 2.78597 3.25510 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 3 0.14518 3.35575 2.78597 3.25510 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 4 3.40484 0.13363 3.45549 2.80837 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 5 3.40484 0.13363 3.45549 2.80837 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 6 0.14518 3.35575 2.78597 3.25510 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 7 2.93035 3.56282 0.11992 3.46492 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 8 3.06393 2.57943 3.11303 0.18271 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 9 0.14518 3.35575 2.78597 3.25510 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 10 0.14518 3.35575 2.78597 3.25510 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 11 3.40484 0.13363 3.45549 2.80837 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 12 2.93035 3.56282 0.11992 3.46492 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 13 3.06393 2.57943 3.11303 0.18271 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 14 3.06393 2.57943 3.11303 0.18271 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 15 2.93035 3.56282 0.11992 3.46492 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 16 2.93035 3.56282 0.11992 3.46492 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 17 0.14518 3.35575 2.78597 3.25510 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 18 3.06393 2.57943 3.11303 0.18271 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 19 3.40484 0.13363 3.45549 2.80837 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 20 3.40484 0.13363 3.45549 2.80837 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 21 3.40484 0.13363 3.45549 2.80837 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 22 3.06393 2.57943 3.11303 0.18271 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 23 3.06393 2.57943 3.11303 0.18271 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 24 2.93035 3.56282 0.11992 3.46492 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 25 2.93035 3.56282 0.11992 3.46492 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 26 3.40484 0.13363 3.45549 2.80837 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 27 0.14518 3.35575 2.78597 3.25510 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 28 3.06393 2.57943 3.11303 0.18271 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 29 2.93035 3.56282 0.11992 3.46492 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 30 3.06393 2.57943 3.11303 0.18271 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 31 3.40484 0.13363 3.45549 2.80837 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 32 0.14518 3.35575 2.78597 3.25510 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 33 3.06393 2.57943 3.11303 0.18271 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 34 3.06393 2.57943 3.11303 0.18271 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 35 3.40484 0.13363 3.45549 2.80837 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 36 2.93035 3.56282 0.11992 3.46492 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 37 0.14518 3.35575 2.78597 3.25510 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 38 3.06393 2.57943 3.11303 0.18271 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 39 2.93035 3.56282 0.11992 3.46492 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 40 0.14518 3.35575 2.78597 3.25510 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 41 0.14518 3.35575 2.78597 3.25510 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 42 2.93035 3.56282 0.11992 3.46492 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 43 0.14518 3.35575 2.78597 3.25510 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 44 3.40484 0.13363 3.45549 2.80837 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547 45 3.40484 0.13363 3.45549 2.80837 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97913 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:45 2012 NSEQ 27 EFFN 3.318970 CKSUM 2413804547 STATS LOCAL MSV -8.3468 0.71933 STATS LOCAL VITERBI -7.8248 0.71933 STATS LOCAL FORWARD -4.3143 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27364 1.29205 1.44933 1.55706 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 0.00000 * 1 3.43174 0.13037 3.48126 2.82800 1 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 2 0.14205 3.37907 2.80115 3.28062 2 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 3 0.14205 3.37907 2.80115 3.28062 3 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 4 3.43174 0.13037 3.48126 2.82800 4 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 5 2.45577 0.67598 2.52814 1.12167 5 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 6 0.14205 3.37907 2.80115 3.28062 6 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 7 2.94670 3.58655 0.11729 3.49109 7 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 8 3.08741 2.59438 3.13561 0.17887 8 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 9 0.14205 3.37907 2.80115 3.28062 9 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 10 2.94670 3.58655 0.11729 3.49109 10 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 11 3.43174 0.13037 3.48126 2.82800 11 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 12 0.14205 3.37907 2.80115 3.28062 12 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 13 3.43174 0.13037 3.48126 2.82800 13 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 14 3.08741 2.59438 3.13561 0.17887 14 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 15 2.94670 3.58655 0.11729 3.49109 15 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 16 2.94670 3.58655 0.11729 3.49109 16 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 17 0.14205 3.37907 2.80115 3.28062 17 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 18 3.08741 2.59438 3.13561 0.17887 18 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 19 3.43174 0.13037 3.48126 2.82800 19 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 20 3.43174 0.13037 3.48126 2.82800 20 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 21 3.43174 0.13037 3.48126 2.82800 21 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 22 3.08741 2.59438 3.13561 0.17887 22 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 23 3.08741 2.59438 3.13561 0.17887 23 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 24 2.94670 3.58655 0.11729 3.49109 24 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 25 2.94670 3.58655 0.11729 3.49109 25 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 26 3.43174 0.13037 3.48126 2.82800 26 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 27 0.14205 3.37907 2.80115 3.28062 27 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 28 3.43174 0.13037 3.48126 2.82800 28 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 29 2.94670 3.58655 0.11729 3.49109 29 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 30 3.08741 2.59438 3.13561 0.17887 30 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 31 3.43174 0.13037 3.48126 2.82800 31 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 32 0.14205 3.37907 2.80115 3.28062 32 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 33 3.08741 2.59438 3.13561 0.17887 33 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 34 3.08741 2.59438 3.13561 0.17887 34 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 35 3.43174 0.13037 3.48126 2.82800 35 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 36 2.94670 3.58655 0.11729 3.49109 36 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 37 0.14205 3.37907 2.80115 3.28062 37 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 38 3.08741 2.59438 3.13561 0.17887 38 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 39 2.94670 3.58655 0.11729 3.49109 39 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 40 0.14205 3.37907 2.80115 3.28062 40 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 41 0.14205 3.37907 2.80115 3.28062 41 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 42 2.94670 3.58655 0.11729 3.49109 42 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 43 0.14205 3.37907 2.80115 3.28062 43 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 44 0.14205 3.37907 2.80115 3.28062 44 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01078 4.01078 1.46634 0.26236 1.09861 0.40547 45 3.43174 0.13037 3.48126 2.82800 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99249 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:19 2012 NSEQ 21 EFFN 3.201782 CKSUM 1658522092 STATS LOCAL MSV -8.0401 0.71932 STATS LOCAL VITERBI -7.6304 0.71932 STATS LOCAL FORWARD -3.8782 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22290 1.15288 1.61272 1.65781 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 0.00000 * 1 3.38754 0.13578 3.43891 2.79570 1 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 2 0.14722 3.34076 2.77619 3.23872 2 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 3 0.14722 3.34076 2.77619 3.23872 3 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 4 3.38754 0.13578 3.43891 2.79570 4 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 5 3.38754 0.13578 3.43891 2.79570 5 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 6 0.14722 3.34076 2.77619 3.23872 6 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 7 3.04891 2.56986 3.09858 0.18521 7 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 8 3.38754 0.13578 3.43891 2.79570 8 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 9 0.14722 3.34076 2.77619 3.23872 9 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 10 2.91977 3.54752 0.12166 3.44806 10 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 11 3.38754 0.13578 3.43891 2.79570 11 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 12 0.14722 3.34076 2.77619 3.23872 12 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 13 0.14722 3.34076 2.77619 3.23872 13 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 14 3.38754 0.13578 3.43891 2.79570 14 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 15 2.91977 3.54752 0.12166 3.44806 15 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 16 2.91977 3.54752 0.12166 3.44806 16 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 17 0.14722 3.34076 2.77619 3.23872 17 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 18 3.04891 2.56986 3.09858 0.18521 18 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 19 3.38754 0.13578 3.43891 2.79570 19 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 20 3.04891 2.56986 3.09858 0.18521 20 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 21 3.38754 0.13578 3.43891 2.79570 21 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 22 3.04891 2.56986 3.09858 0.18521 22 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 23 3.04891 2.56986 3.09858 0.18521 23 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 24 2.91977 3.54752 0.12166 3.44806 24 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 25 2.91977 3.54752 0.12166 3.44806 25 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 26 3.38754 0.13578 3.43891 2.79570 26 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 27 0.14722 3.34076 2.77619 3.23872 27 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 28 3.04891 2.56986 3.09858 0.18521 28 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 29 3.38754 0.13578 3.43891 2.79570 29 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 30 3.38754 0.13578 3.43891 2.79570 30 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 31 3.38754 0.13578 3.43891 2.79570 31 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 32 0.14722 3.34076 2.77619 3.23872 32 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 33 3.38754 0.13578 3.43891 2.79570 33 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 34 3.04891 2.56986 3.09858 0.18521 34 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 35 3.38754 0.13578 3.43891 2.79570 35 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 36 2.91977 3.54752 0.12166 3.44806 36 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 37 0.14722 3.34076 2.77619 3.23872 37 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 38 3.04891 2.56986 3.09858 0.18521 38 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 39 2.91977 3.54752 0.12166 3.44806 39 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 40 0.14722 3.34076 2.77619 3.23872 40 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 41 0.14722 3.34076 2.77619 3.23872 41 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 42 2.91977 3.54752 0.12166 3.44806 42 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 43 0.14722 3.34076 2.77619 3.23872 43 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 44 0.14722 3.34076 2.77619 3.23872 44 - - 1.38629 1.38629 1.38629 1.38629 0.03773 3.98931 3.98931 1.46634 0.26236 1.09861 0.40547 45 3.38754 0.13578 3.43891 2.79570 45 - - 1.38629 1.38629 1.38629 1.38629 0.01904 3.97063 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:33:46 2012 NSEQ 50 EFFN 3.213501 CKSUM 2717834285 STATS LOCAL MSV -7.9933 0.71932 STATS LOCAL VITERBI -7.7017 0.71932 STATS LOCAL FORWARD -4.0693 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33855 1.32610 1.38194 1.50881 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 0.00000 * 1 3.39204 0.13522 3.44322 2.79900 1 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 2 0.14669 3.34466 2.77874 3.24298 2 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 3 0.14669 3.34466 2.77874 3.24298 3 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 4 3.39204 0.13522 3.44322 2.79900 4 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 5 3.39204 0.13522 3.44322 2.79900 5 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 6 0.14669 3.34466 2.77874 3.24298 6 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 7 0.14669 3.34466 2.77874 3.24298 7 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 8 3.05282 2.57235 3.10233 0.18456 8 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 9 2.92253 3.55151 0.12120 3.45245 9 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 10 0.14669 3.34466 2.77874 3.24298 10 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 11 3.39204 0.13522 3.44322 2.79900 11 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 12 2.92253 3.55151 0.12120 3.45245 12 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 13 3.05282 2.57235 3.10233 0.18456 13 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 14 3.05282 2.57235 3.10233 0.18456 14 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 15 2.92253 3.55151 0.12120 3.45245 15 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 16 2.92253 3.55151 0.12120 3.45245 16 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 17 0.14669 3.34466 2.77874 3.24298 17 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 18 3.05282 2.57235 3.10233 0.18456 18 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 19 3.39204 0.13522 3.44322 2.79900 19 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 20 3.39204 0.13522 3.44322 2.79900 20 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 21 3.39204 0.13522 3.44322 2.79900 21 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 22 3.05282 2.57235 3.10233 0.18456 22 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 23 3.05282 2.57235 3.10233 0.18456 23 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 24 2.92253 3.55151 0.12120 3.45245 24 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 25 2.92253 3.55151 0.12120 3.45245 25 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 26 3.39204 0.13522 3.44322 2.79900 26 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 27 0.14669 3.34466 2.77874 3.24298 27 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 28 3.05282 2.57235 3.10233 0.18456 28 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 29 2.92253 3.55151 0.12120 3.45245 29 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 30 3.39204 0.13522 3.44322 2.79900 30 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 31 3.39204 0.13522 3.44322 2.79900 31 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 32 3.05282 2.57235 3.10233 0.18456 32 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 33 2.92253 3.55151 0.12120 3.45245 33 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 34 0.14669 3.34466 2.77874 3.24298 34 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 35 3.05282 2.57235 3.10233 0.18456 35 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 36 3.39204 0.13522 3.44322 2.79900 36 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 37 2.92253 3.55151 0.12120 3.45245 37 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 38 0.14669 3.34466 2.77874 3.24298 38 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 39 3.05282 2.57235 3.10233 0.18456 39 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 40 2.92253 3.55151 0.12120 3.45245 40 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 41 0.14669 3.34466 2.77874 3.24298 41 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 42 0.14669 3.34466 2.77874 3.24298 42 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 43 2.92253 3.55151 0.12120 3.45245 43 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 44 0.14669 3.34466 2.77874 3.24298 44 - - 1.38629 1.38629 1.38629 1.38629 0.03764 3.99148 3.99148 1.46634 0.26236 1.09861 0.40547 45 3.39204 0.13522 3.44322 2.79900 45 - - 1.38629 1.38629 1.38629 1.38629 0.01900 3.97284 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:33:38 2012 NSEQ 2 EFFN 2.000000 CKSUM 39506437 STATS LOCAL MSV -7.7237 0.72769 STATS LOCAL VITERBI -8.1700 0.72769 STATS LOCAL FORWARD -3.4656 0.72769 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34588 1.19438 1.44025 1.60979 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:28 2012 NSEQ 201 EFFN 3.333847 CKSUM 1606966183 STATS LOCAL MSV -7.9954 0.71933 STATS LOCAL VITERBI -7.5713 0.71933 STATS LOCAL FORWARD -3.8460 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16898 1.20293 1.70580 1.57321 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 0.00000 * 1 3.01595 0.16788 3.26438 2.69825 1 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 2 0.14142 3.38383 2.80424 3.28584 2 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 3 0.14142 3.38383 2.80424 3.28584 3 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 4 3.43722 0.12972 3.48651 2.83199 4 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 5 3.09221 2.59743 3.14023 0.17810 5 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 6 0.18889 3.14271 2.69687 2.78807 6 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 7 3.09221 2.59743 3.14023 0.17810 7 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 8 3.43722 0.12972 3.48651 2.83199 8 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 9 0.14142 3.38383 2.80424 3.28584 9 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 10 0.14142 3.38383 2.80424 3.28584 10 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 11 3.43722 0.12972 3.48651 2.83199 11 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 12 0.14142 3.38383 2.80424 3.28584 12 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 13 0.14142 3.38383 2.80424 3.28584 13 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 14 3.43722 0.12972 3.48651 2.83199 14 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 15 2.95002 3.59138 0.11676 3.49642 15 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 16 2.95002 3.59138 0.11676 3.49642 16 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 17 0.14142 3.38383 2.80424 3.28584 17 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 18 3.09221 2.59743 3.14023 0.17810 18 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 19 3.43722 0.12972 3.48651 2.83199 19 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 20 3.09221 2.59743 3.14023 0.17810 20 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 21 3.43722 0.12972 3.48651 2.83199 21 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 22 3.09221 2.59743 3.14023 0.17810 22 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 23 3.09221 2.59743 3.14023 0.17810 23 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 24 2.95002 3.59138 0.11676 3.49642 24 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 25 2.95002 3.59138 0.11676 3.49642 25 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 26 3.43722 0.12972 3.48651 2.83199 26 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 27 0.14142 3.38383 2.80424 3.28584 27 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 28 3.09221 2.59743 3.14023 0.17810 28 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 29 3.43722 0.12972 3.48651 2.83199 29 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 30 3.43722 0.12972 3.48651 2.83199 30 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 31 3.43722 0.12972 3.48651 2.83199 31 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 32 0.19425 3.19767 2.40606 3.08956 32 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 33 3.43722 0.12972 3.48651 2.83199 33 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 34 3.09221 2.59743 3.14023 0.17810 34 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 35 3.43722 0.12972 3.48651 2.83199 35 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 36 2.84322 3.13754 0.15084 3.26008 36 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 37 0.14142 3.38383 2.80424 3.28584 37 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 38 3.09221 2.59743 3.14023 0.17810 38 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 39 2.95002 3.59138 0.11676 3.49642 39 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 40 0.14142 3.38383 2.80424 3.28584 40 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 41 0.14142 3.38383 2.80424 3.28584 41 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 42 2.84322 3.13754 0.15084 3.26008 42 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 43 0.14142 3.38383 2.80424 3.28584 43 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 44 0.14142 3.38383 2.80424 3.28584 44 - - 1.38629 1.38629 1.38629 1.38629 0.03681 4.01347 4.01347 1.46634 0.26236 1.09861 0.40547 45 3.43722 0.12972 3.48651 2.83199 45 - - 1.38629 1.38629 1.38629 1.38629 0.01857 3.99523 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:52 2012 NSEQ 6 EFFN 3.190430 CKSUM 2584526133 STATS LOCAL MSV -8.2534 0.71932 STATS LOCAL VITERBI -7.8632 0.71932 STATS LOCAL FORWARD -4.3290 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33987 1.26667 1.38267 1.58258 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 0.00000 * 1 3.38316 0.13633 3.43471 2.79249 1 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 2 0.14775 3.33697 2.77371 3.23457 2 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 3 0.14775 3.33697 2.77371 3.23457 3 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 4 3.38316 0.13633 3.43471 2.79249 4 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 5 3.38316 0.13633 3.43471 2.79249 5 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 6 0.14775 3.33697 2.77371 3.23457 6 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 7 2.91709 3.54364 0.12210 3.44379 7 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 8 3.04512 2.56744 3.09493 0.18585 8 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 9 2.91709 3.54364 0.12210 3.44379 9 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 10 2.91709 3.54364 0.12210 3.44379 10 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 11 3.38316 0.13633 3.43471 2.79249 11 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 12 0.14775 3.33697 2.77371 3.23457 12 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 13 3.38316 0.13633 3.43471 2.79249 13 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 14 3.04512 2.56744 3.09493 0.18585 14 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 15 2.91709 3.54364 0.12210 3.44379 15 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 16 2.91709 3.54364 0.12210 3.44379 16 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 17 0.14775 3.33697 2.77371 3.23457 17 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 18 3.04512 2.56744 3.09493 0.18585 18 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 19 3.38316 0.13633 3.43471 2.79249 19 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 20 3.38316 0.13633 3.43471 2.79249 20 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 21 3.38316 0.13633 3.43471 2.79249 21 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 22 3.04512 2.56744 3.09493 0.18585 22 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 23 3.04512 2.56744 3.09493 0.18585 23 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 24 2.91709 3.54364 0.12210 3.44379 24 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 25 2.91709 3.54364 0.12210 3.44379 25 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 26 3.38316 0.13633 3.43471 2.79249 26 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 27 0.14775 3.33697 2.77371 3.23457 27 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 28 3.38316 0.13633 3.43471 2.79249 28 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 29 2.91709 3.54364 0.12210 3.44379 29 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 30 3.04512 2.56744 3.09493 0.18585 30 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 31 3.38316 0.13633 3.43471 2.79249 31 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 32 0.14775 3.33697 2.77371 3.23457 32 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 33 3.04512 2.56744 3.09493 0.18585 33 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 34 3.04512 2.56744 3.09493 0.18585 34 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 35 3.38316 0.13633 3.43471 2.79249 35 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 36 2.91709 3.54364 0.12210 3.44379 36 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 37 0.14775 3.33697 2.77371 3.23457 37 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 38 3.04512 2.56744 3.09493 0.18585 38 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 39 2.91709 3.54364 0.12210 3.44379 39 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 40 0.14775 3.33697 2.77371 3.23457 40 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 41 0.14775 3.33697 2.77371 3.23457 41 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 42 2.91709 3.54364 0.12210 3.44379 42 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 43 0.14775 3.33697 2.77371 3.23457 43 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 44 0.14775 3.33697 2.77371 3.23457 44 - - 1.38629 1.38629 1.38629 1.38629 0.03781 3.98721 3.98721 1.46634 0.26236 1.09861 0.40547 45 3.38316 0.13633 3.43471 2.79249 45 - - 1.38629 1.38629 1.38629 1.38629 0.01908 3.96848 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:34:08 2012 NSEQ 134 EFFN 3.275574 CKSUM 1945163550 STATS LOCAL MSV -7.9950 0.71931 STATS LOCAL VITERBI -7.5252 0.71931 STATS LOCAL FORWARD -3.9566 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16367 1.25866 1.60846 1.59241 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 0.00000 * 1 3.41558 0.13232 3.46578 2.81622 1 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 2 0.14392 3.36506 2.79204 3.26529 2 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 3 0.14392 3.36506 2.79204 3.26529 3 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 4 3.41558 0.13232 3.46578 2.81622 4 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 5 3.41558 0.13232 3.46578 2.81622 5 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 6 0.14392 3.36506 2.79204 3.26529 6 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 7 3.07329 2.58539 3.12203 0.18117 7 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 8 3.41558 0.13232 3.46578 2.81622 8 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 9 0.14392 3.36506 2.79204 3.26529 9 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 10 2.93689 3.57231 0.11886 3.47538 10 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 11 3.41558 0.13232 3.46578 2.81622 11 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 12 0.14392 3.36506 2.79204 3.26529 12 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 13 0.14392 3.36506 2.79204 3.26529 13 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 14 3.41558 0.13232 3.46578 2.81622 14 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 15 2.93689 3.57231 0.11886 3.47538 15 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 16 2.93689 3.57231 0.11886 3.47538 16 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 17 0.14392 3.36506 2.79204 3.26529 17 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 18 3.07329 2.58539 3.12203 0.18117 18 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 19 3.41558 0.13232 3.46578 2.81622 19 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 20 3.07329 2.58539 3.12203 0.18117 20 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 21 3.41558 0.13232 3.46578 2.81622 21 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 22 3.07329 2.58539 3.12203 0.18117 22 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 23 3.07329 2.58539 3.12203 0.18117 23 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 24 2.93689 3.57231 0.11886 3.47538 24 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 25 2.93689 3.57231 0.11886 3.47538 25 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 26 3.41558 0.13232 3.46578 2.81622 26 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 27 0.14392 3.36506 2.79204 3.26529 27 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 28 3.07329 2.58539 3.12203 0.18117 28 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 29 2.75140 1.89152 2.81170 0.32129 29 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 30 3.41558 0.13232 3.46578 2.81622 30 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 31 3.41558 0.13232 3.46578 2.81622 31 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 32 0.14392 3.36506 2.79204 3.26529 32 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 33 0.14392 3.36506 2.79204 3.26529 33 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 34 3.07329 2.58539 3.12203 0.18117 34 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 35 3.41558 0.13232 3.46578 2.81622 35 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 36 2.93689 3.57231 0.11886 3.47538 36 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 37 0.14392 3.36506 2.79204 3.26529 37 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 38 3.07329 2.58539 3.12203 0.18117 38 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 39 2.93689 3.57231 0.11886 3.47538 39 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 40 0.14392 3.36506 2.79204 3.26529 40 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 41 0.14392 3.36506 2.79204 3.26529 41 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 42 2.93689 3.57231 0.11886 3.47538 42 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 43 0.14392 3.36506 2.79204 3.26529 43 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 44 0.14392 3.36506 2.79204 3.26529 44 - - 1.38629 1.38629 1.38629 1.38629 0.03721 4.00288 4.00288 1.46634 0.26236 1.09861 0.40547 45 3.41558 0.13232 3.46578 2.81622 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98445 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:33:59 2012 NSEQ 138 EFFN 3.373352 CKSUM 394397067 STATS LOCAL MSV -7.3325 0.71932 STATS LOCAL VITERBI -7.5786 0.71932 STATS LOCAL FORWARD -3.9181 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45043 1.37995 1.21600 1.52544 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 0.00000 * 1 3.45164 0.12802 3.50031 2.84247 1 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 2 0.13979 3.39635 2.81236 3.29954 2 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 3 0.13979 3.39635 2.81236 3.29954 3 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 4 3.45164 0.12802 3.50031 2.84247 4 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 5 3.10488 2.60548 3.15241 0.17608 5 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 6 2.95872 3.60405 0.11539 3.51042 6 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 7 2.95872 3.60405 0.11539 3.51042 7 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 8 3.10488 2.60548 3.15241 0.17608 8 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 9 0.13979 3.39635 2.81236 3.29954 9 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 10 2.95872 3.60405 0.11539 3.51042 10 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 11 3.45164 0.12802 3.50031 2.84247 11 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 12 2.95872 3.60405 0.11539 3.51042 12 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 13 3.10488 2.60548 3.15241 0.17608 13 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 14 2.61637 1.58066 2.68147 0.42674 14 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 15 2.95872 3.60405 0.11539 3.51042 15 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 16 2.95872 3.60405 0.11539 3.51042 16 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 17 0.13979 3.39635 2.81236 3.29954 17 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 18 3.10488 2.60548 3.15241 0.17608 18 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 19 3.45164 0.12802 3.50031 2.84247 19 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 20 3.45164 0.12802 3.50031 2.84247 20 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 21 3.45164 0.12802 3.50031 2.84247 21 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 22 3.10488 2.60548 3.15241 0.17608 22 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 23 3.45164 0.12802 3.50031 2.84247 23 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 24 2.95872 3.60405 0.11539 3.51042 24 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 25 2.95872 3.60405 0.11539 3.51042 25 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 26 3.45164 0.12802 3.50031 2.84247 26 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 27 0.13979 3.39635 2.81236 3.29954 27 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 28 3.10488 2.60548 3.15241 0.17608 28 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 29 2.95872 3.60405 0.11539 3.51042 29 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 30 2.95872 3.60405 0.11539 3.51042 30 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 31 3.45164 0.12802 3.50031 2.84247 31 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 32 3.10488 2.60548 3.15241 0.17608 32 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 33 0.13979 3.39635 2.81236 3.29954 33 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 34 3.10488 2.60548 3.15241 0.17608 34 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 35 3.45164 0.12802 3.50031 2.84247 35 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 36 2.95872 3.60405 0.11539 3.51042 36 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 37 0.13979 3.39635 2.81236 3.29954 37 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 38 3.10488 2.60548 3.15241 0.17608 38 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 39 2.95872 3.60405 0.11539 3.51042 39 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 40 0.13979 3.39635 2.81236 3.29954 40 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 41 0.13979 3.39635 2.81236 3.29954 41 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 42 2.95872 3.60405 0.11539 3.51042 42 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 43 0.13979 3.39635 2.81236 3.29954 43 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 44 1.24519 2.61558 0.58949 2.47243 44 - - 1.38629 1.38629 1.38629 1.38629 0.03654 4.02058 4.02058 1.46634 0.26236 1.09861 0.40547 45 3.45164 0.12802 3.50031 2.84247 45 - - 1.38629 1.38629 1.38629 1.38629 0.01844 4.00248 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:33:27 2012 NSEQ 5 EFFN 3.217773 CKSUM 2341168831 STATS LOCAL MSV -8.1703 0.71930 STATS LOCAL VITERBI -7.8329 0.71930 STATS LOCAL FORWARD -4.2772 0.71930 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33869 1.32607 1.38181 1.50883 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 0.00000 * 1 3.39368 0.13501 3.44479 2.80020 1 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 2 0.14649 3.34608 2.77966 3.24453 2 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 3 0.14649 3.34608 2.77966 3.24453 3 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 4 3.39368 0.13501 3.44479 2.80020 4 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 5 3.39368 0.13501 3.44479 2.80020 5 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 6 0.14649 3.34608 2.77966 3.24453 6 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 7 2.92353 3.55295 0.12104 3.45404 7 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 8 3.05424 2.57325 3.10370 0.18432 8 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 9 0.14649 3.34608 2.77966 3.24453 9 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 10 2.92353 3.55295 0.12104 3.45404 10 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 11 3.39368 0.13501 3.44479 2.80020 11 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 12 2.92353 3.55295 0.12104 3.45404 12 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 13 3.05424 2.57325 3.10370 0.18432 13 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 14 3.05424 2.57325 3.10370 0.18432 14 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 15 2.92353 3.55295 0.12104 3.45404 15 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 16 2.92353 3.55295 0.12104 3.45404 16 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 17 0.14649 3.34608 2.77966 3.24453 17 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 18 3.05424 2.57325 3.10370 0.18432 18 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 19 3.39368 0.13501 3.44479 2.80020 19 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 20 3.39368 0.13501 3.44479 2.80020 20 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 21 3.39368 0.13501 3.44479 2.80020 21 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 22 3.05424 2.57325 3.10370 0.18432 22 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 23 3.05424 2.57325 3.10370 0.18432 23 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 24 2.92353 3.55295 0.12104 3.45404 24 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 25 2.92353 3.55295 0.12104 3.45404 25 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 26 3.39368 0.13501 3.44479 2.80020 26 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 27 0.14649 3.34608 2.77966 3.24453 27 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 28 3.39368 0.13501 3.44479 2.80020 28 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 29 2.92353 3.55295 0.12104 3.45404 29 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 30 3.05424 2.57325 3.10370 0.18432 30 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 31 3.39368 0.13501 3.44479 2.80020 31 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 32 0.14649 3.34608 2.77966 3.24453 32 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 33 3.05424 2.57325 3.10370 0.18432 33 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 34 3.05424 2.57325 3.10370 0.18432 34 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 35 3.39368 0.13501 3.44479 2.80020 35 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 36 2.92353 3.55295 0.12104 3.45404 36 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 37 0.14649 3.34608 2.77966 3.24453 37 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 38 3.05424 2.57325 3.10370 0.18432 38 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 39 2.92353 3.55295 0.12104 3.45404 39 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 40 0.14649 3.34608 2.77966 3.24453 40 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 41 0.14649 3.34608 2.77966 3.24453 41 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 42 2.92353 3.55295 0.12104 3.45404 42 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 43 0.14649 3.34608 2.77966 3.24453 43 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 44 0.14649 3.34608 2.77966 3.24453 44 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 45 3.39368 0.13501 3.44479 2.80020 45 - - 1.38629 1.38629 1.38629 1.38629 0.01898 3.97364 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:32:59 2012 NSEQ 33 EFFN 3.226685 CKSUM 2560356789 STATS LOCAL MSV -8.2782 0.71932 STATS LOCAL VITERBI -7.8334 0.71932 STATS LOCAL FORWARD -4.3141 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27722 1.32550 1.45154 1.50820 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 0.00000 * 1 3.39708 0.13459 3.44806 2.80270 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 2 0.14609 3.34903 2.78159 3.24776 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 3 0.14609 3.34903 2.78159 3.24776 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 4 3.39708 0.13459 3.44806 2.80270 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 5 3.39708 0.13459 3.44806 2.80270 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 6 0.14609 3.34903 2.78159 3.24776 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 7 2.92562 3.55597 0.12070 3.45736 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 8 3.05719 2.57514 3.10654 0.18382 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 9 0.14609 3.34903 2.78159 3.24776 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 10 2.92562 3.55597 0.12070 3.45736 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 11 3.39708 0.13459 3.44806 2.80270 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 12 0.14609 3.34903 2.78159 3.24776 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 13 3.05719 2.57514 3.10654 0.18382 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 14 3.05719 2.57514 3.10654 0.18382 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 15 2.92562 3.55597 0.12070 3.45736 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 16 2.92562 3.55597 0.12070 3.45736 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 17 0.14609 3.34903 2.78159 3.24776 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 18 3.05719 2.57514 3.10654 0.18382 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 19 3.39708 0.13459 3.44806 2.80270 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 20 3.39708 0.13459 3.44806 2.80270 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 21 3.39708 0.13459 3.44806 2.80270 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 22 3.05719 2.57514 3.10654 0.18382 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 23 3.05719 2.57514 3.10654 0.18382 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 24 2.92562 3.55597 0.12070 3.45736 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 25 2.92562 3.55597 0.12070 3.45736 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 26 3.39708 0.13459 3.44806 2.80270 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 27 0.14609 3.34903 2.78159 3.24776 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 28 3.39708 0.13459 3.44806 2.80270 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 29 2.92562 3.55597 0.12070 3.45736 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 30 3.05719 2.57514 3.10654 0.18382 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 31 3.39708 0.13459 3.44806 2.80270 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 32 0.14609 3.34903 2.78159 3.24776 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 33 3.05719 2.57514 3.10654 0.18382 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 34 3.05719 2.57514 3.10654 0.18382 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 35 3.39708 0.13459 3.44806 2.80270 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 36 2.92562 3.55597 0.12070 3.45736 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 37 0.14609 3.34903 2.78159 3.24776 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 38 3.05719 2.57514 3.10654 0.18382 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 39 2.92562 3.55597 0.12070 3.45736 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 40 0.14609 3.34903 2.78159 3.24776 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 41 0.14609 3.34903 2.78159 3.24776 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 42 2.92562 3.55597 0.12070 3.45736 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 43 0.14609 3.34903 2.78159 3.24776 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 44 0.14609 3.34903 2.78159 3.24776 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99391 3.99391 1.46634 0.26236 1.09861 0.40547 45 3.39708 0.13459 3.44806 2.80270 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97531 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Tu_58S_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 8 10:29:57 2012 NSEQ 247 EFFN 3.147049 CKSUM 4292221496 STATS LOCAL MSV -7.9808 0.71934 STATS LOCAL VITERBI -7.7697 0.71934 STATS LOCAL FORWARD -4.1501 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47801 1.15573 1.32077 1.65994 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 0.00000 * 1 3.36626 0.13847 3.41850 2.78007 1 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 2 0.14979 3.32235 2.76414 3.21859 2 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 3 0.14979 3.32235 2.76414 3.21859 3 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 4 3.36626 0.13847 3.41850 2.78007 4 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 5 3.36626 0.13847 3.41850 2.78007 5 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 6 2.90669 3.52866 0.12384 3.42729 6 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 7 2.90669 3.52866 0.12384 3.42729 7 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 8 3.36626 0.13847 3.41850 2.78007 8 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 9 0.14979 3.32235 2.76414 3.21859 9 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 10 2.90669 3.52866 0.12384 3.42729 10 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 11 3.36626 0.13847 3.41850 2.78007 11 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 12 2.90669 3.52866 0.12384 3.42729 12 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 13 3.36626 0.13847 3.41850 2.78007 13 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 14 3.03052 2.55812 3.08088 0.18833 14 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 15 2.90669 3.52866 0.12384 3.42729 15 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 16 2.90669 3.52866 0.12384 3.42729 16 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 17 0.14979 3.32235 2.76414 3.21859 17 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 18 3.03052 2.55812 3.08088 0.18833 18 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 19 3.36626 0.13847 3.41850 2.78007 19 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 20 3.36626 0.13847 3.41850 2.78007 20 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 21 3.36626 0.13847 3.41850 2.78007 21 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 22 3.03052 2.55812 3.08088 0.18833 22 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 23 3.03052 2.55812 3.08088 0.18833 23 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 24 2.90669 3.52866 0.12384 3.42729 24 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 25 2.90669 3.52866 0.12384 3.42729 25 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 26 3.36626 0.13847 3.41850 2.78007 26 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 27 0.14979 3.32235 2.76414 3.21859 27 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 28 3.36626 0.13847 3.41850 2.78007 28 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 29 2.90669 3.52866 0.12384 3.42729 29 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 30 3.03052 2.55812 3.08088 0.18833 30 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 31 3.36626 0.13847 3.41850 2.78007 31 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 32 0.14979 3.32235 2.76414 3.21859 32 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 33 3.03052 2.55812 3.08088 0.18833 33 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 34 3.03052 2.55812 3.08088 0.18833 34 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 35 3.36626 0.13847 3.41850 2.78007 35 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 36 2.90669 3.52866 0.12384 3.42729 36 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 37 0.14979 3.32235 2.76414 3.21859 37 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 38 3.03052 2.55812 3.08088 0.18833 38 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 39 2.90669 3.52866 0.12384 3.42729 39 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 40 0.14979 3.32235 2.76414 3.21859 40 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 41 0.14979 3.32235 2.76414 3.21859 41 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 42 2.90669 3.52866 0.12384 3.42729 42 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 43 0.14979 3.32235 2.76414 3.21859 43 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 44 3.36626 0.13847 3.41850 2.78007 44 - - 1.38629 1.38629 1.38629 1.38629 0.03812 3.97913 3.97913 1.46634 0.26236 1.09861 0.40547 45 3.36626 0.13847 3.41850 2.78007 45 - - 1.38629 1.38629 1.38629 1.38629 0.01924 3.96025 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:39 2012 NSEQ 8 EFFN 3.277344 CKSUM 2911135073 STATS LOCAL MSV -7.9182 0.71934 STATS LOCAL VITERBI -7.6223 0.71934 STATS LOCAL FORWARD -3.8796 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16429 1.32295 1.69932 1.43256 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 0.00000 * 1 3.07387 2.58576 3.12259 0.18107 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 2 0.14384 3.36564 2.79241 3.26592 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 3 0.14384 3.36564 2.79241 3.26592 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 4 3.41625 0.13224 3.46642 2.81671 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 5 3.07387 2.58576 3.12259 0.18107 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 6 0.14384 3.36564 2.79241 3.26592 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 7 3.07387 2.58576 3.12259 0.18107 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 8 3.41625 0.13224 3.46642 2.81671 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 9 0.14384 3.36564 2.79241 3.26592 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 10 0.14384 3.36564 2.79241 3.26592 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 11 3.41625 0.13224 3.46642 2.81671 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 12 0.14384 3.36564 2.79241 3.26592 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 13 0.14384 3.36564 2.79241 3.26592 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 14 3.41625 0.13224 3.46642 2.81671 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 15 2.93730 3.57289 0.11880 3.47603 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 16 2.93730 3.57289 0.11880 3.47603 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 17 0.14384 3.36564 2.79241 3.26592 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 18 3.07387 2.58576 3.12259 0.18107 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 19 3.41625 0.13224 3.46642 2.81671 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 20 3.07387 2.58576 3.12259 0.18107 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 21 3.41625 0.13224 3.46642 2.81671 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 22 3.07387 2.58576 3.12259 0.18107 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 23 3.07387 2.58576 3.12259 0.18107 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 24 2.93730 3.57289 0.11880 3.47603 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 25 2.93730 3.57289 0.11880 3.47603 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 26 3.41625 0.13224 3.46642 2.81671 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 27 3.07387 2.58576 3.12259 0.18107 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 28 3.41625 0.13224 3.46642 2.81671 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 29 3.07387 2.58576 3.12259 0.18107 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 30 3.41625 0.13224 3.46642 2.81671 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 31 0.14384 3.36564 2.79241 3.26592 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 32 3.41625 0.13224 3.46642 2.81671 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 33 0.14384 3.36564 2.79241 3.26592 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 34 3.07387 2.58576 3.12259 0.18107 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 35 3.41625 0.13224 3.46642 2.81671 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 36 2.93730 3.57289 0.11880 3.47603 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 37 0.14384 3.36564 2.79241 3.26592 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 38 3.07387 2.58576 3.12259 0.18107 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 39 2.93730 3.57289 0.11880 3.47603 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 40 0.14384 3.36564 2.79241 3.26592 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 41 0.14384 3.36564 2.79241 3.26592 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 42 2.93730 3.57289 0.11880 3.47603 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 43 0.14384 3.36564 2.79241 3.26592 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 44 0.14384 3.36564 2.79241 3.26592 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 45 3.41625 0.13224 3.46642 2.81671 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98478 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:32 2012 NSEQ 3 EFFN 3.000000 CKSUM 1599797913 STATS LOCAL MSV -8.0270 0.72040 STATS LOCAL VITERBI -7.6903 0.72040 STATS LOCAL FORWARD -4.1473 0.72040 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40629 1.25924 1.52853 1.36954 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 3.30705 0.14631 3.36166 2.73626 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_onea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 3192173373 STATS LOCAL MSV -7.4790 0.72785 STATS LOCAL VITERBI -8.2285 0.72785 STATS LOCAL FORWARD -3.6683 0.72785 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34212 1.34481 1.37550 1.48984 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_oneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:13 2012 NSEQ 2 EFFN 2.000000 CKSUM 911593098 STATS LOCAL MSV -7.5503 0.72837 STATS LOCAL VITERBI -8.2240 0.72837 STATS LOCAL FORWARD -3.5417 0.72837 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24193 1.23206 1.72557 1.42126 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_onec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:19 2012 NSEQ 3 EFFN 3.000000 CKSUM 1106141846 STATS LOCAL MSV -7.9458 0.72046 STATS LOCAL VITERBI -7.6852 0.72046 STATS LOCAL FORWARD -4.0384 0.72046 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21793 1.45865 1.51983 1.37493 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_oned_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:26 2012 NSEQ 3 EFFN 3.000000 CKSUM 2126945751 STATS LOCAL MSV -8.0504 0.72131 STATS LOCAL VITERBI -7.6798 0.72131 STATS LOCAL FORWARD -4.1485 0.72131 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39162 1.44694 1.35968 1.34979 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.42796 0.63000 2.50086 1.21343 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.86982 3.47591 0.13017 3.36931 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.10429 0.72298 1.37213 1.97185 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_onee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:35 2012 NSEQ 6018 EFFN 6.184001 CKSUM 1119134815 STATS LOCAL MSV -7.1036 0.71932 STATS LOCAL VITERBI -7.4586 0.71932 STATS LOCAL FORWARD -4.0710 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23079 1.39059 1.57755 1.37624 1.38629 1.38629 1.38629 1.38629 0.02422 4.42892 4.42282 1.46634 0.26236 0.00000 * 1 0.94227 1.03147 2.27275 1.89215 1 - - 1.38629 1.38629 1.38629 1.38629 0.02415 4.42885 4.42885 1.46634 0.26236 1.09455 0.40750 2 0.14717 3.27665 2.96834 3.04257 2 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42892 4.42496 1.46634 0.26236 1.09861 0.40547 3 0.10782 3.54479 3.07668 3.60374 3 - - 1.38629 1.38629 1.38629 1.38629 0.02418 4.42887 4.42574 1.46634 0.26236 1.09597 0.40679 4 3.69894 0.10439 3.73717 2.98470 4 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42888 4.42888 1.46634 0.26236 1.09653 0.40651 5 3.35759 2.80340 3.37656 0.13879 5 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 6 3.18581 2.61406 3.38315 0.16078 6 - - 1.38629 1.38629 1.38629 1.38629 0.02450 4.42892 4.40045 1.46634 0.26236 1.09861 0.40547 7 3.29770 2.88721 3.45196 0.13283 7 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42858 4.42545 1.46634 0.26236 1.07972 0.41505 8 3.23722 0.22401 3.27713 2.09005 8 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42888 4.42888 1.46634 0.26236 1.09653 0.40651 9 0.16480 3.44443 2.46488 3.35255 9 - - 1.38629 1.38629 1.38629 1.38629 0.02429 4.42892 4.41705 1.46634 0.26236 1.09861 0.40547 10 0.28772 3.05690 1.83107 3.15229 10 - - 1.38629 1.38629 1.38629 1.38629 0.02534 4.42878 4.33573 1.46634 0.26236 1.09071 0.40944 11 3.82045 0.09350 3.74522 3.13002 11 - - 1.38629 1.38629 1.38629 1.38629 0.02417 4.42776 4.42776 1.46634 0.26236 1.03755 0.43745 12 0.11356 3.69835 2.91908 3.55415 12 - - 1.38629 1.38629 1.38629 1.38629 0.02639 4.42892 4.26065 1.46634 0.26236 1.09861 0.40547 13 0.10720 3.84261 3.00467 3.48487 13 - - 1.38629 1.38629 1.38629 1.38629 0.02424 4.42673 4.42361 1.46634 0.26236 0.98964 0.46476 14 3.09893 0.22916 3.27576 2.10448 14 - - 1.38629 1.38629 1.38629 1.38629 0.02418 4.42888 4.42586 1.46634 0.26236 1.09653 0.40651 15 3.17005 3.73216 0.08804 3.99922 15 - - 1.38629 1.38629 1.38629 1.38629 0.02418 4.42888 4.42576 1.46634 0.26236 1.09660 0.40648 16 3.15207 3.78967 0.09088 3.83959 16 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42888 4.42888 1.46634 0.26236 1.09653 0.40651 17 0.09551 3.91028 3.09045 3.66628 17 - - 1.38629 1.38629 1.38629 1.38629 0.02433 4.42892 4.41399 1.46634 0.26236 1.09861 0.40547 18 3.48256 2.77559 3.66172 0.12639 18 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42874 4.42561 1.46634 0.26236 1.08868 0.41047 19 3.17442 0.14425 3.55538 2.74976 19 - - 1.38629 1.38629 1.38629 1.38629 0.02418 4.42888 4.42577 1.46634 0.26236 1.09653 0.40651 20 3.46629 2.88566 3.67967 0.11910 20 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42888 4.42888 1.46634 0.26236 1.09654 0.40650 21 3.61797 0.11401 3.69446 2.88138 21 - - 1.38629 1.38629 1.38629 1.38629 0.02418 4.42892 4.42581 1.46634 0.26236 1.09861 0.40547 22 3.48971 2.80145 3.66913 0.12412 22 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42888 4.42491 1.46634 0.26236 1.09654 0.40650 23 2.75305 2.73446 3.26658 0.18248 23 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42887 4.42887 1.46634 0.26236 1.09596 0.40679 24 3.23668 3.93489 0.07904 4.06571 24 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 25 3.15424 3.87025 0.08475 4.03215 25 - - 1.38629 1.38629 1.38629 1.38629 0.02428 4.42892 4.41767 1.46634 0.26236 1.09861 0.40547 26 2.39058 0.90694 2.54271 0.85329 26 - - 1.38629 1.38629 1.38629 1.38629 0.02420 4.42879 4.42481 1.46634 0.26236 1.09113 0.40923 27 3.21157 2.86165 3.59944 0.13331 27 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42887 4.42887 1.46634 0.26236 1.09596 0.40679 28 3.42425 0.11728 3.70705 2.92738 28 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 29 2.89824 2.20340 3.09878 0.23655 29 - - 1.38629 1.38629 1.38629 1.38629 0.02502 4.42892 4.35974 1.46634 0.26236 1.09861 0.40547 30 2.03126 0.90966 1.13505 1.93264 30 - - 1.38629 1.38629 1.38629 1.38629 0.02416 4.42807 4.42807 1.46634 0.26236 1.05302 0.42906 31 2.93856 3.30192 0.12692 3.52537 31 - - 1.38629 1.38629 1.38629 1.38629 0.02422 4.42892 4.42279 1.46634 0.26236 1.09861 0.40547 32 3.92271 0.10120 3.75675 2.93558 32 - - 1.38629 1.38629 1.38629 1.38629 0.02415 4.42885 4.42885 1.46634 0.26236 1.09453 0.40751 33 0.11569 3.61932 3.04777 3.35301 33 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 34 2.45890 2.71201 3.11641 0.21846 34 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 35 3.36876 0.10977 3.86071 3.02674 35 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42892 4.42491 1.46634 0.26236 1.09861 0.40547 36 3.05007 3.71093 0.09961 3.77215 36 - - 1.38629 1.38629 1.38629 1.38629 0.02421 4.42887 4.42376 1.46634 0.26236 1.09594 0.40680 37 0.11783 3.77776 2.97177 3.29513 37 - - 1.38629 1.38629 1.38629 1.38629 0.02415 4.42886 4.42886 1.46634 0.26236 1.09521 0.40717 38 3.00761 2.79065 3.37334 0.15673 38 - - 1.38629 1.38629 1.38629 1.38629 0.02536 4.42892 4.33381 1.46634 0.26236 1.09861 0.40547 39 3.16336 3.77425 0.08709 4.00803 39 - - 1.38629 1.38629 1.38629 1.38629 0.02629 4.42773 4.26802 1.46634 0.26236 1.03622 0.43818 40 0.10498 3.84654 3.06725 3.44966 40 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42685 4.42685 1.46634 0.26236 0.99502 0.46159 41 0.10244 3.67990 3.08870 3.62754 41 - - 1.38629 1.38629 1.38629 1.38629 0.02594 4.42892 4.29199 1.46634 0.26236 1.09861 0.40547 42 3.01635 3.71212 0.10278 3.71873 42 - - 1.38629 1.38629 1.38629 1.38629 0.02419 4.42717 4.42717 1.46634 0.26236 1.00944 0.45322 43 0.10471 3.70280 3.02235 3.64687 43 - - 1.38629 1.38629 1.38629 1.38629 0.02414 4.42892 4.42892 1.46634 0.26236 1.09861 0.40547 44 0.10299 3.67108 2.98308 3.82684 44 - - 1.38629 1.38629 1.38629 1.38629 0.02420 4.42892 4.42432 1.46634 0.26236 1.09861 0.40547 45 3.51745 0.10570 3.63606 3.11731 45 - - 1.38629 1.38629 1.38629 1.38629 0.01215 4.41687 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:58 2012 NSEQ 6 EFFN 3.424805 CKSUM 568992662 STATS LOCAL MSV -7.6707 0.71932 STATS LOCAL VITERBI -7.7202 0.71932 STATS LOCAL FORWARD -4.1086 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32515 1.69650 1.46106 1.14281 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 0.00000 * 1 0.13772 3.41241 2.82276 3.31713 1 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 2 0.13772 3.41241 2.82276 3.31713 2 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 3 0.13772 3.41241 2.82276 3.31713 3 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 4 3.12118 2.61584 3.16808 0.17352 4 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 5 3.12118 2.61584 3.16808 0.17352 5 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 6 3.12118 2.61584 3.16808 0.17352 6 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 7 3.12118 2.61584 3.16808 0.17352 7 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 8 3.47011 0.12588 3.51799 2.85586 8 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 9 0.13772 3.41241 2.82276 3.31713 9 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 10 0.13772 3.41241 2.82276 3.31713 10 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 11 3.12118 2.61584 3.16808 0.17352 11 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 12 3.12118 2.61584 3.16808 0.17352 12 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 13 2.00150 3.06582 0.26731 2.94087 13 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 14 3.12118 2.61584 3.16808 0.17352 14 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 15 2.96982 3.62027 0.11366 3.52834 15 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 16 2.96982 3.62027 0.11366 3.52834 16 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 17 0.13772 3.41241 2.82276 3.31713 17 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 18 3.12118 2.61584 3.16808 0.17352 18 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 19 3.47011 0.12588 3.51799 2.85586 19 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 20 3.12118 2.61584 3.16808 0.17352 20 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 21 3.47011 0.12588 3.51799 2.85586 21 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 22 3.12118 2.61584 3.16808 0.17352 22 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 23 3.12118 2.61584 3.16808 0.17352 23 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 24 2.96982 3.62027 0.11366 3.52834 24 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 25 2.96982 3.62027 0.11366 3.52834 25 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 26 3.12118 2.61584 3.16808 0.17352 26 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 27 3.12118 2.61584 3.16808 0.17352 27 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 28 3.47011 0.12588 3.51799 2.85586 28 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 29 3.12118 2.61584 3.16808 0.17352 29 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 30 2.96982 3.62027 0.11366 3.52834 30 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 31 2.96982 3.62027 0.11366 3.52834 31 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 32 3.47011 0.12588 3.51799 2.85586 32 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 33 0.13772 3.41241 2.82276 3.31713 33 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 34 3.12118 2.61584 3.16808 0.17352 34 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 35 3.47011 0.12588 3.51799 2.85586 35 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 36 2.96982 3.62027 0.11366 3.52834 36 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 37 0.13772 3.41241 2.82276 3.31713 37 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 38 3.12118 2.61584 3.16808 0.17352 38 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 39 2.96982 3.62027 0.11366 3.52834 39 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 40 0.13772 3.41241 2.82276 3.31713 40 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 41 0.13772 3.41241 2.82276 3.31713 41 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 42 2.96982 3.62027 0.11366 3.52834 42 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 43 0.13772 3.41241 2.82276 3.31713 43 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 44 0.13772 3.41241 2.82276 3.31713 44 - - 1.38629 1.38629 1.38629 1.38629 0.03620 4.02977 4.02977 1.46634 0.26236 1.09861 0.40547 45 3.47011 0.12588 3.51799 2.85586 45 - - 1.38629 1.38629 1.38629 1.38629 0.01827 4.01183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:50 2012 NSEQ 4 EFFN 3.238281 CKSUM 2127522718 STATS LOCAL MSV -8.1444 0.71932 STATS LOCAL VITERBI -7.6531 0.71932 STATS LOCAL FORWARD -4.2153 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40776 1.25902 1.45586 1.43475 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 3.40150 0.13404 3.45229 2.80593 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 0.14557 3.35286 2.78409 3.25194 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 3.40150 0.13404 3.45229 2.80593 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 3.40150 0.13404 3.45229 2.80593 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 3.06103 2.57758 3.11024 0.18319 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 3.06103 2.57758 3.11024 0.18319 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 2.92831 3.55987 0.12026 3.46167 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.40150 0.13404 3.45229 2.80593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 3.06103 2.57758 3.11024 0.18319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 2.92831 3.55987 0.12026 3.46167 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 3.40150 0.13404 3.45229 2.80593 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 0.14557 3.35286 2.78409 3.25194 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 0.14557 3.35286 2.78409 3.25194 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 2.92831 3.55987 0.12026 3.46167 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 2.92831 3.55987 0.12026 3.46167 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 0.14557 3.35286 2.78409 3.25194 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 3.06103 2.57758 3.11024 0.18319 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 3.40150 0.13404 3.45229 2.80593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 3.06103 2.57758 3.11024 0.18319 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 3.40150 0.13404 3.45229 2.80593 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 3.06103 2.57758 3.11024 0.18319 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 3.40150 0.13404 3.45229 2.80593 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 2.92831 3.55987 0.12026 3.46167 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 2.92831 3.55987 0.12026 3.46167 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 3.40150 0.13404 3.45229 2.80593 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 3.06103 2.57758 3.11024 0.18319 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.06103 2.57758 3.11024 0.18319 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 3.06103 2.57758 3.11024 0.18319 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 2.92831 3.55987 0.12026 3.46167 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 3.40150 0.13404 3.45229 2.80593 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 0.14557 3.35286 2.78409 3.25194 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 3.06103 2.57758 3.11024 0.18319 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 3.40150 0.13404 3.45229 2.80593 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 2.92831 3.55987 0.12026 3.46167 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 0.14557 3.35286 2.78409 3.25194 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 0.14557 3.35286 2.78409 3.25194 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 2.92831 3.55987 0.12026 3.46167 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 0.14557 3.35286 2.78409 3.25194 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 0.14557 3.35286 2.78409 3.25194 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 2.92831 3.55987 0.12026 3.46167 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 0.14557 3.35286 2.78409 3.25194 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 0.14557 3.35286 2.78409 3.25194 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 3.40150 0.13404 3.45229 2.80593 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_threea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:00 2012 NSEQ 3 EFFN 3.000000 CKSUM 4260290841 STATS LOCAL MSV -8.0950 0.72078 STATS LOCAL VITERBI -7.6606 0.72078 STATS LOCAL FORWARD -3.7616 0.72078 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27571 1.34946 1.51972 1.41628 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.97980 2.52563 3.03204 0.19727 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 3.30705 0.14631 3.36166 2.73626 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.97980 2.52563 3.03204 0.19727 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.43223 0.62271 2.50508 1.22417 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 3.30705 0.14631 3.36166 2.73626 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_threeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 2515742412 STATS LOCAL MSV -7.4012 0.72812 STATS LOCAL VITERBI -8.2474 0.72812 STATS LOCAL FORWARD -3.8516 0.72812 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34396 1.28536 1.50285 1.42651 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.57915 2.25909 2.64442 0.28946 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.57915 2.25909 2.64442 0.28946 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_threec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:13 2012 NSEQ 3 EFFN 3.000000 CKSUM 40593212 STATS LOCAL MSV -7.8271 0.72084 STATS LOCAL VITERBI -7.5976 0.72084 STATS LOCAL FORWARD -4.2954 0.72084 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16383 1.43972 1.59552 1.39467 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.43088 1.34923 2.50068 0.56112 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.15719 3.27118 2.73043 3.16274 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 3.30705 0.14631 3.36166 2.73626 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.97980 2.52563 3.03204 0.19727 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.97980 2.52563 3.03204 0.19727 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 3.30705 0.14631 3.36166 2.73626 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.86982 3.47591 0.13017 3.36931 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 0.15719 3.27118 2.73043 3.16274 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 0.15719 3.27118 2.73043 3.16274 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.15719 3.27118 2.73043 3.16274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_threed_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:33:19 2012 NSEQ 213 EFFN 5.131943 CKSUM 1826064835 STATS LOCAL MSV -7.0552 0.71932 STATS LOCAL VITERBI -7.5420 0.71932 STATS LOCAL FORWARD -4.2571 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23142 1.43778 1.59724 1.31598 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 0.00000 * 1 2.14629 0.52401 2.57899 1.53670 1 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 2 0.11726 3.69769 2.91057 3.46023 2 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 3 0.11213 3.43733 3.04512 3.63695 3 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 4 3.92693 0.08392 3.95360 3.17942 4 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 5 3.50227 2.70908 3.53513 0.13454 5 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 6 3.42069 2.46958 3.45812 0.16111 6 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 7 3.55662 2.89458 3.58645 0.11828 7 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 8 2.48236 1.93441 2.89501 0.33317 8 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 9 0.13093 3.68529 2.64867 3.61610 9 - - 1.38629 1.38629 1.38629 1.38629 0.03085 4.29483 4.08979 1.46634 0.26236 1.09861 0.40547 10 0.25752 3.30004 1.90268 3.19463 10 - - 1.38629 1.38629 1.38629 1.38629 0.02774 4.29172 4.29172 1.46634 0.26236 0.96670 0.47858 11 3.92693 0.08392 3.95360 3.17942 11 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 12 0.09515 3.81975 3.08659 3.76471 12 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 13 0.10613 3.77714 2.92762 3.71800 13 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 14 3.06653 1.70977 3.12101 0.31691 14 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 15 3.23656 4.01339 0.07942 3.96460 15 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 16 3.23656 4.01339 0.07942 3.96460 16 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 17 0.10470 3.78262 2.94677 3.72405 17 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 18 3.55662 2.89458 3.58645 0.11828 18 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 19 3.92693 0.08392 3.95360 3.17942 19 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 20 3.10719 2.84118 3.43856 0.14525 20 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 21 3.81351 0.09741 3.61226 3.12907 21 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 22 3.43724 2.85466 3.22951 0.13846 22 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 23 1.42473 2.20720 2.35645 0.58940 23 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 24 3.23656 4.01339 0.07942 3.96460 24 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 25 3.23656 4.01339 0.07942 3.96460 25 - - 1.38629 1.38629 1.38629 1.38629 0.03140 4.29483 4.05874 1.46634 0.26236 1.09861 0.40547 26 2.96243 0.39393 3.02701 1.48967 26 - - 1.38629 1.38629 1.38629 1.38629 0.02776 4.29119 4.29119 1.46634 0.26236 0.94757 0.49051 27 3.51742 2.75827 3.54941 0.12990 27 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 28 3.86496 0.09554 3.89498 2.99961 28 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 29 3.36395 2.32301 3.40445 0.18128 29 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 30 2.60427 0.79117 2.59785 0.92056 30 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 31 1.95425 3.14672 0.25808 3.15113 31 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 32 3.67071 0.13489 3.71082 2.57346 32 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 33 0.11950 3.47856 2.90360 3.61362 33 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 34 1.32568 2.21797 2.28539 0.64662 34 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 35 3.87576 0.09349 3.90518 3.02871 35 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 36 3.23656 4.01339 0.07942 3.96460 36 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 37 0.10470 3.78262 2.94677 3.72405 37 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 38 3.55662 2.89458 3.58645 0.11828 38 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 39 3.23656 4.01339 0.07942 3.96460 39 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 40 0.09515 3.81975 3.08659 3.76471 40 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 41 0.09515 3.81975 3.08659 3.76471 41 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 42 3.03759 3.95890 0.09122 3.90450 42 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 43 0.11032 3.71742 3.04887 3.41919 43 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 44 0.18130 3.51625 2.26621 3.42954 44 - - 1.38629 1.38629 1.38629 1.38629 0.02766 4.29483 4.29483 1.46634 0.26236 1.09861 0.40547 45 3.92693 0.08392 3.95360 3.17942 45 - - 1.38629 1.38629 1.38629 1.38629 0.01392 4.28109 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:32:49 2012 NSEQ 6 EFFN 3.325195 CKSUM 3975223576 STATS LOCAL MSV -8.0799 0.71932 STATS LOCAL VITERBI -7.5791 0.71932 STATS LOCAL FORWARD -4.3067 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27300 1.44987 1.44897 1.38390 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 0.00000 * 1 3.43404 0.13010 3.48346 2.82967 1 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 2 0.14179 3.38107 2.80245 3.28281 2 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 3 0.14179 3.38107 2.80245 3.28281 3 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 4 3.43404 0.13010 3.48346 2.82967 4 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 5 3.08942 2.59566 3.13755 0.17855 5 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 6 0.14179 3.38107 2.80245 3.28281 6 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 7 2.72264 1.81209 2.78408 0.34362 7 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 8 0.14179 3.38107 2.80245 3.28281 8 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 9 0.14179 3.38107 2.80245 3.28281 9 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 10 0.14179 3.38107 2.80245 3.28281 10 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 11 3.43404 0.13010 3.48346 2.82967 11 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 12 2.94809 3.58857 0.11707 3.49333 12 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 13 2.94809 3.58857 0.11707 3.49333 13 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 14 3.08942 2.59566 3.13755 0.17855 14 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 15 2.94809 3.58857 0.11707 3.49333 15 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 16 2.94809 3.58857 0.11707 3.49333 16 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 17 0.14179 3.38107 2.80245 3.28281 17 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 18 3.08942 2.59566 3.13755 0.17855 18 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 19 3.43404 0.13010 3.48346 2.82967 19 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 20 3.08942 2.59566 3.13755 0.17855 20 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 21 3.43404 0.13010 3.48346 2.82967 21 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 22 3.08942 2.59566 3.13755 0.17855 22 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 23 3.08942 2.59566 3.13755 0.17855 23 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 24 2.94809 3.58857 0.11707 3.49333 24 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 25 2.94809 3.58857 0.11707 3.49333 25 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 26 3.43404 0.13010 3.48346 2.82967 26 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 27 3.08942 2.59566 3.13755 0.17855 27 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 28 3.43404 0.13010 3.48346 2.82967 28 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 29 3.08942 2.59566 3.13755 0.17855 29 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 30 3.43404 0.13010 3.48346 2.82967 30 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 31 2.94809 3.58857 0.11707 3.49333 31 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 32 3.08942 2.59566 3.13755 0.17855 32 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 33 0.14179 3.38107 2.80245 3.28281 33 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 34 3.08942 2.59566 3.13755 0.17855 34 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 35 3.43404 0.13010 3.48346 2.82967 35 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 36 2.94809 3.58857 0.11707 3.49333 36 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 37 0.14179 3.38107 2.80245 3.28281 37 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 38 3.08942 2.59566 3.13755 0.17855 38 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 39 2.94809 3.58857 0.11707 3.49333 39 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 40 0.14179 3.38107 2.80245 3.28281 40 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 41 0.14179 3.38107 2.80245 3.28281 41 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 42 2.94809 3.58857 0.11707 3.49333 42 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 43 0.14179 3.38107 2.80245 3.28281 43 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 44 0.14179 3.38107 2.80245 3.28281 44 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 45 3.43404 0.13010 3.48346 2.82967 45 - - 1.38629 1.38629 1.38629 1.38629 0.01860 3.99364 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Fungi_Ge_58S_start_zero_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Feb 15 22:34:11 2012 NSEQ 180 EFFN 5.435486 CKSUM 2386844801 STATS LOCAL MSV -6.9273 0.71932 STATS LOCAL VITERBI -7.5029 0.71932 STATS LOCAL FORWARD -4.0018 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22669 1.39207 1.56864 1.38689 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 0.00000 * 1 0.94710 1.00789 2.28328 1.92967 1 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 2 0.11006 3.41694 3.07606 3.67815 2 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 3 0.09070 3.87300 3.12235 3.82307 3 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 4 3.93316 0.08956 3.96005 3.05716 4 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 5 3.54913 2.69234 3.58062 0.13277 5 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 6 2.52095 2.67995 2.71702 0.24210 6 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 7 3.12783 2.75488 3.46033 0.14949 7 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 8 2.55957 0.39454 2.86686 1.65133 8 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 9 0.19534 3.51793 2.15951 3.42955 9 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 10 0.23152 3.41558 1.98347 3.31791 10 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 11 3.87382 0.10110 3.90411 2.89649 11 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 12 0.14372 3.68227 2.50499 3.61089 12 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 13 0.12817 3.73590 2.64535 3.67059 13 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 14 3.31150 0.24563 3.36686 1.91846 14 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 15 3.27060 4.06220 0.07599 4.01859 15 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 16 3.27060 4.06220 0.07599 4.01859 16 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 17 0.09070 3.87300 3.12235 3.82307 17 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 18 3.57372 2.77528 3.60377 0.12511 18 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 19 3.88180 0.09953 3.91164 2.91669 19 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 20 2.56446 2.67525 3.21281 0.20591 20 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 21 3.98414 0.07984 4.00813 3.21997 21 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 22 3.61686 2.93444 3.64440 0.11223 22 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 23 2.57644 2.40242 3.12918 0.23610 23 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 24 3.27060 4.06220 0.07599 4.01859 24 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 25 3.27060 4.06220 0.07599 4.01859 25 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 26 2.76126 0.93114 2.82849 0.72654 26 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 27 3.61686 2.93444 3.64440 0.11223 27 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 28 3.48590 0.11175 3.79370 2.94514 28 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 29 2.79868 1.91613 2.81295 0.31210 29 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 30 1.95243 0.83866 1.33980 1.80860 30 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 31 2.50102 2.89562 0.20326 3.06467 31 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 32 3.56931 0.15423 3.45925 2.48531 32 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 33 0.13855 3.69988 2.54909 3.63047 33 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 34 2.24350 2.70525 3.07720 0.24722 34 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 35 3.98414 0.07984 4.00813 3.21997 35 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 36 3.27060 4.06220 0.07599 4.01859 36 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 37 0.09070 3.87300 3.12235 3.82307 37 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 38 3.61686 2.93444 3.64440 0.11223 38 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 39 3.27060 4.06220 0.07599 4.01859 39 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 40 0.11072 3.79832 2.83611 3.74028 40 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 41 0.09070 3.87300 3.12235 3.82307 41 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 42 3.27060 4.06220 0.07599 4.01859 42 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 43 0.09070 3.87300 3.12235 3.82307 43 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 44 0.11325 3.78910 2.80567 3.72999 44 - - 1.38629 1.38629 1.38629 1.38629 0.02654 4.33539 4.33539 1.46634 0.26236 1.09861 0.40547 45 3.98414 0.07984 4.00813 3.21997 45 - - 1.38629 1.38629 1.38629 1.38629 0.01336 4.32221 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ca_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:20:50 2012 NSEQ 19 EFFN 3.242432 CKSUM 4190388161 STATS LOCAL MSV -8.0455 0.71931 STATS LOCAL VITERBI -7.7318 0.71931 STATS LOCAL FORWARD -4.0565 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27721 1.39338 1.37511 1.51350 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 0.00000 * 1 2.92928 3.56127 0.12010 3.46320 1 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 2 2.92928 3.56127 0.12010 3.46320 2 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 3 3.06240 2.57846 3.11155 0.18296 3 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 4 3.06240 2.57846 3.11155 0.18296 4 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 5 0.14538 3.35422 2.78498 3.25343 5 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 6 3.40308 0.13385 3.45380 2.80708 6 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 7 3.40308 0.13385 3.45380 2.80708 7 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 8 3.06240 2.57846 3.11155 0.18296 8 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 9 3.40308 0.13385 3.45380 2.80708 9 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 10 0.14538 3.35422 2.78498 3.25343 10 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 11 2.92928 3.56127 0.12010 3.46320 11 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 12 2.92928 3.56127 0.12010 3.46320 12 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 13 3.06240 2.57846 3.11155 0.18296 13 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 14 3.40308 0.13385 3.45380 2.80708 14 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 15 0.14538 3.35422 2.78498 3.25343 15 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 16 2.92928 3.56127 0.12010 3.46320 16 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 17 0.14538 3.35422 2.78498 3.25343 17 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 18 2.92928 3.56127 0.12010 3.46320 18 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 19 0.14538 3.35422 2.78498 3.25343 19 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 20 0.14538 3.35422 2.78498 3.25343 20 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 21 2.92928 3.56127 0.12010 3.46320 21 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 22 0.14538 3.35422 2.78498 3.25343 22 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 23 3.40308 0.13385 3.45380 2.80708 23 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 24 3.06240 2.57846 3.11155 0.18296 24 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 25 0.14538 3.35422 2.78498 3.25343 25 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 26 3.40308 0.13385 3.45380 2.80708 26 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 27 3.40308 0.13385 3.45380 2.80708 27 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 28 3.40308 0.13385 3.45380 2.80708 28 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 29 2.92928 3.56127 0.12010 3.46320 29 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 30 3.40308 0.13385 3.45380 2.80708 30 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 31 3.06240 2.57846 3.11155 0.18296 31 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 32 2.92928 3.56127 0.12010 3.46320 32 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 33 2.92928 3.56127 0.12010 3.46320 33 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 34 0.14538 3.35422 2.78498 3.25343 34 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 35 3.40308 0.13385 3.45380 2.80708 35 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 36 3.06240 2.57846 3.11155 0.18296 36 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 37 2.91396 2.23691 2.96830 0.23881 37 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 38 0.14538 3.35422 2.78498 3.25343 38 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 39 0.14538 3.35422 2.78498 3.25343 39 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 40 2.92928 3.56127 0.12010 3.46320 40 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 41 3.40308 0.13385 3.45380 2.80708 41 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 42 0.14538 3.35422 2.78498 3.25343 42 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 43 3.06240 2.57846 3.11155 0.18296 43 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 44 0.14538 3.35422 2.78498 3.25343 44 - - 1.38629 1.38629 1.38629 1.38629 0.03744 3.99681 3.99681 1.46634 0.26236 1.09861 0.40547 45 3.06240 2.57846 3.11155 0.18296 45 - - 1.38629 1.38629 1.38629 1.38629 0.01890 3.97827 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ca_4_LSU_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:21:08 2012 NSEQ 2 EFFN 2.000000 CKSUM 3702927743 STATS LOCAL MSV -7.4267 0.72841 STATS LOCAL VITERBI -8.2951 0.72841 STATS LOCAL FORWARD -3.6302 0.72841 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26770 1.34594 1.40657 1.54531 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.92825 2.28391 0.95698 2.13014 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ca_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 14:21:00 2012 NSEQ 2 EFFN 2.000000 CKSUM 2456163041 STATS LOCAL MSV -7.4153 0.72853 STATS LOCAL VITERBI -8.3192 0.72853 STATS LOCAL FORWARD -3.4955 0.72853 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26557 1.40180 1.40639 1.48394 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.92825 2.28391 0.95698 2.13014 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Cr_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:41:45 2012 NSEQ 2 EFFN 2.000000 CKSUM 462568671 STATS LOCAL MSV -7.4582 0.72869 STATS LOCAL VITERBI -8.2930 0.72869 STATS LOCAL FORWARD -3.4600 0.72869 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.08140 1.40089 1.60285 1.54562 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.92825 2.28391 0.95698 2.13014 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Cr_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:42:00 2012 NSEQ 4 EFFN 3.324219 CKSUM 2616281576 STATS LOCAL MSV -7.9946 0.71933 STATS LOCAL VITERBI -7.6382 0.71933 STATS LOCAL FORWARD -4.2064 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.07278 1.32492 1.68182 1.57947 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 0.00000 * 1 3.43368 0.13014 3.48311 2.82941 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 2 0.14183 3.38076 2.80224 3.28247 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 3 0.14183 3.38076 2.80224 3.28247 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 4 3.08911 2.59546 3.13724 0.17860 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 5 2.94787 3.58826 0.11710 3.49298 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 6 0.14183 3.38076 2.80224 3.28247 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 7 3.43368 0.13014 3.48311 2.82941 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 8 3.43368 0.13014 3.48311 2.82941 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 9 3.08911 2.59546 3.13724 0.17860 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 10 3.43368 0.13014 3.48311 2.82941 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 11 0.39665 2.76258 1.64938 2.62921 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 12 0.14183 3.38076 2.80224 3.28247 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 13 0.14183 3.38076 2.80224 3.28247 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 14 3.08911 2.59546 3.13724 0.17860 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 15 3.43368 0.13014 3.48311 2.82941 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 16 0.14183 3.38076 2.80224 3.28247 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 17 2.94787 3.58826 0.11710 3.49298 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 18 0.14183 3.38076 2.80224 3.28247 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 19 3.08911 2.59546 3.13724 0.17860 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 20 2.94787 3.58826 0.11710 3.49298 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 21 0.14183 3.38076 2.80224 3.28247 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 22 2.94787 3.58826 0.11710 3.49298 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 23 0.14183 3.38076 2.80224 3.28247 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 24 3.43368 0.13014 3.48311 2.82941 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 25 3.08911 2.59546 3.13724 0.17860 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 26 0.14183 3.38076 2.80224 3.28247 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 27 3.43368 0.13014 3.48311 2.82941 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 28 3.43368 0.13014 3.48311 2.82941 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 29 3.43368 0.13014 3.48311 2.82941 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 30 2.94787 3.58826 0.11710 3.49298 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 31 3.43368 0.13014 3.48311 2.82941 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 32 3.08911 2.59546 3.13724 0.17860 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 33 2.94787 3.58826 0.11710 3.49298 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 34 0.14183 3.38076 2.80224 3.28247 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 35 0.14183 3.38076 2.80224 3.28247 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 36 3.43368 0.13014 3.48311 2.82941 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 37 3.08911 2.59546 3.13724 0.17860 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 38 3.08911 2.59546 3.13724 0.17860 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 39 0.14183 3.38076 2.80224 3.28247 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 40 0.14183 3.38076 2.80224 3.28247 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 41 2.94787 3.58826 0.11710 3.49298 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 42 3.43368 0.13014 3.48311 2.82941 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 43 0.14183 3.38076 2.80224 3.28247 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 44 3.08911 2.59546 3.13724 0.17860 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01173 4.01173 1.46634 0.26236 1.09861 0.40547 45 0.14183 3.38076 2.80224 3.28247 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99346 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:10:54 2012 NSEQ 13 EFFN 3.157959 CKSUM 2705029945 STATS LOCAL MSV -8.1009 0.71932 STATS LOCAL VITERBI -7.5556 0.71932 STATS LOCAL FORWARD -3.5932 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21948 1.27457 1.37951 1.75237 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 0.00000 * 1 0.14927 3.32605 2.76656 3.22263 1 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 2 3.37054 0.13793 3.42260 2.78321 2 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 3 0.14927 3.32605 2.76656 3.22263 3 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 4 3.03421 2.56047 3.08443 0.18770 4 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 5 2.90932 3.53245 0.12339 3.43146 5 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 6 0.14927 3.32605 2.76656 3.22263 6 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 7 3.37054 0.13793 3.42260 2.78321 7 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 8 3.37054 0.13793 3.42260 2.78321 8 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 9 3.03421 2.56047 3.08443 0.18770 9 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 10 3.37054 0.13793 3.42260 2.78321 10 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 11 0.14927 3.32605 2.76656 3.22263 11 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 12 3.37054 0.13793 3.42260 2.78321 12 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 13 2.90932 3.53245 0.12339 3.43146 13 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 14 2.90932 3.53245 0.12339 3.43146 14 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 15 2.90932 3.53245 0.12339 3.43146 15 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 16 2.90932 3.53245 0.12339 3.43146 16 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 17 2.90932 3.53245 0.12339 3.43146 17 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 18 3.37054 0.13793 3.42260 2.78321 18 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 19 0.14927 3.32605 2.76656 3.22263 19 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 20 0.14927 3.32605 2.76656 3.22263 20 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 21 2.90932 3.53245 0.12339 3.43146 21 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 22 0.14927 3.32605 2.76656 3.22263 22 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 23 3.37054 0.13793 3.42260 2.78321 23 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 24 2.90932 3.53245 0.12339 3.43146 24 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 25 0.14927 3.32605 2.76656 3.22263 25 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 26 3.37054 0.13793 3.42260 2.78321 26 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 27 3.37054 0.13793 3.42260 2.78321 27 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 28 3.37054 0.13793 3.42260 2.78321 28 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 29 2.90932 3.53245 0.12339 3.43146 29 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 30 3.37054 0.13793 3.42260 2.78321 30 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 31 3.03421 2.56047 3.08443 0.18770 31 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 32 0.14927 3.32605 2.76656 3.22263 32 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 33 2.90932 3.53245 0.12339 3.43146 33 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 34 0.14927 3.32605 2.76656 3.22263 34 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 35 3.37054 0.13793 3.42260 2.78321 35 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 36 3.03421 2.56047 3.08443 0.18770 36 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 37 3.03421 2.56047 3.08443 0.18770 37 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 38 0.14927 3.32605 2.76656 3.22263 38 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 39 0.14927 3.32605 2.76656 3.22263 39 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 40 2.90932 3.53245 0.12339 3.43146 40 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 41 3.37054 0.13793 3.42260 2.78321 41 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 42 0.14927 3.32605 2.76656 3.22263 42 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 43 3.03421 2.56047 3.08443 0.18770 43 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 44 0.14927 3.32605 2.76656 3.22263 44 - - 1.38629 1.38629 1.38629 1.38629 0.03804 3.98117 3.98117 1.46634 0.26236 1.09861 0.40547 45 3.03421 2.56047 3.08443 0.18770 45 - - 1.38629 1.38629 1.38629 1.38629 0.01920 3.96233 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:42 2012 NSEQ 2 EFFN 2.000000 CKSUM 3855300155 STATS LOCAL MSV -7.3864 0.72798 STATS LOCAL VITERBI -8.1812 0.72798 STATS LOCAL FORWARD -3.4551 0.72798 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28556 1.46229 1.37140 1.43528 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.53331 3.02441 0.20344 2.88069 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_eleven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:11:26 2012 NSEQ 2 EFFN 2.000000 CKSUM 2817641508 STATS LOCAL MSV -7.4790 0.72747 STATS LOCAL VITERBI -8.1480 0.72747 STATS LOCAL FORWARD -3.5143 0.72747 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28620 1.41386 1.26126 1.62364 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.23862 2.84929 2.43386 2.70756 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.53331 3.02441 0.20344 2.88069 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:12 2012 NSEQ 50 EFFN 3.219604 CKSUM 1135089104 STATS LOCAL MSV -8.0607 0.71933 STATS LOCAL VITERBI -7.6980 0.71933 STATS LOCAL FORWARD -4.1210 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16433 1.33117 1.52336 1.58123 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 0.00000 * 1 0.14641 3.34669 2.78006 3.24519 1 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 2 3.05484 2.57364 3.10428 0.18422 2 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 3 2.92396 3.55357 0.12097 3.45473 3 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 4 3.05484 2.57364 3.10428 0.18422 4 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 5 0.14641 3.34669 2.78006 3.24519 5 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 6 2.92396 3.55357 0.12097 3.45473 6 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 7 3.39438 0.13492 3.44546 2.80072 7 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 8 3.39438 0.13492 3.44546 2.80072 8 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 9 3.05484 2.57364 3.10428 0.18422 9 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 10 3.39438 0.13492 3.44546 2.80072 10 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 11 0.14641 3.34669 2.78006 3.24519 11 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 12 3.39438 0.13492 3.44546 2.80072 12 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 13 3.05484 2.57364 3.10428 0.18422 13 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 14 2.92396 3.55357 0.12097 3.45473 14 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 15 2.92396 3.55357 0.12097 3.45473 15 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 16 2.92396 3.55357 0.12097 3.45473 16 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 17 0.14641 3.34669 2.78006 3.24519 17 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 18 3.39438 0.13492 3.44546 2.80072 18 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 19 0.14641 3.34669 2.78006 3.24519 19 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 20 0.14641 3.34669 2.78006 3.24519 20 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 21 2.92396 3.55357 0.12097 3.45473 21 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 22 0.14641 3.34669 2.78006 3.24519 22 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 23 3.39438 0.13492 3.44546 2.80072 23 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 24 0.14641 3.34669 2.78006 3.24519 24 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 25 0.14641 3.34669 2.78006 3.24519 25 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 26 3.39438 0.13492 3.44546 2.80072 26 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 27 3.39438 0.13492 3.44546 2.80072 27 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 28 3.39438 0.13492 3.44546 2.80072 28 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 29 2.92396 3.55357 0.12097 3.45473 29 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 30 3.39438 0.13492 3.44546 2.80072 30 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 31 3.05484 2.57364 3.10428 0.18422 31 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 32 0.14641 3.34669 2.78006 3.24519 32 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 33 2.92396 3.55357 0.12097 3.45473 33 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 34 0.14641 3.34669 2.78006 3.24519 34 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 35 3.39438 0.13492 3.44546 2.80072 35 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 36 3.05484 2.57364 3.10428 0.18422 36 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 37 3.05484 2.57364 3.10428 0.18422 37 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 38 0.14641 3.34669 2.78006 3.24519 38 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 39 0.14641 3.34669 2.78006 3.24519 39 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 40 2.92396 3.55357 0.12097 3.45473 40 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 41 3.39438 0.13492 3.44546 2.80072 41 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 42 0.14641 3.34669 2.78006 3.24519 42 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 43 3.05484 2.57364 3.10428 0.18422 43 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 44 0.14641 3.34669 2.78006 3.24519 44 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99261 3.99261 1.46634 0.26236 1.09861 0.40547 45 3.05484 2.57364 3.10428 0.18422 45 - - 1.38629 1.38629 1.38629 1.38629 0.01898 3.97398 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:10:19 2012 NSEQ 58 EFFN 3.366577 CKSUM 526913815 STATS LOCAL MSV -8.0154 0.71932 STATS LOCAL VITERBI -7.6321 0.71932 STATS LOCAL FORWARD -4.1032 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26107 1.45672 1.39738 1.44221 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 0.00000 * 1 0.14007 3.39421 2.81098 3.29720 1 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 2 3.44918 0.12831 3.49795 2.84068 2 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 3 0.14007 3.39421 2.81098 3.29720 3 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 4 3.10271 2.60411 3.15033 0.17642 4 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 5 1.57245 2.78044 0.41659 2.64282 5 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 6 0.14007 3.39421 2.81098 3.29720 6 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 7 3.44918 0.12831 3.49795 2.84068 7 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 8 3.44918 0.12831 3.49795 2.84068 8 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 9 3.10271 2.60411 3.15033 0.17642 9 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 10 3.44918 0.12831 3.49795 2.84068 10 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 11 0.14007 3.39421 2.81098 3.29720 11 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 12 2.95723 3.60189 0.11562 3.50803 12 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 13 2.91751 2.17994 2.97197 0.24631 13 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 14 2.95723 3.60189 0.11562 3.50803 14 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 15 2.95723 3.60189 0.11562 3.50803 15 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 16 2.95723 3.60189 0.11562 3.50803 16 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 17 2.95723 3.60189 0.11562 3.50803 17 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 18 3.10271 2.60411 3.15033 0.17642 18 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 19 0.14007 3.39421 2.81098 3.29720 19 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 20 2.95723 3.60189 0.11562 3.50803 20 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 21 2.95723 3.60189 0.11562 3.50803 21 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 22 0.14007 3.39421 2.81098 3.29720 22 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 23 3.10271 2.60411 3.15033 0.17642 23 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 24 3.10271 2.60411 3.15033 0.17642 24 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 25 0.14007 3.39421 2.81098 3.29720 25 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 26 3.44918 0.12831 3.49795 2.84068 26 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 27 3.44918 0.12831 3.49795 2.84068 27 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 28 3.44918 0.12831 3.49795 2.84068 28 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 29 2.95723 3.60189 0.11562 3.50803 29 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 30 3.44918 0.12831 3.49795 2.84068 30 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 31 3.10271 2.60411 3.15033 0.17642 31 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 32 0.14007 3.39421 2.81098 3.29720 32 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 33 2.95723 3.60189 0.11562 3.50803 33 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 34 0.14007 3.39421 2.81098 3.29720 34 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 35 3.44918 0.12831 3.49795 2.84068 35 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 36 3.10271 2.60411 3.15033 0.17642 36 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 37 3.10271 2.60411 3.15033 0.17642 37 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 38 0.14007 3.39421 2.81098 3.29720 38 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 39 0.14007 3.39421 2.81098 3.29720 39 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 40 2.95723 3.60189 0.11562 3.50803 40 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 41 3.44918 0.12831 3.49795 2.84068 41 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 42 0.14007 3.39421 2.81098 3.29720 42 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 43 3.10271 2.60411 3.15033 0.17642 43 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 44 0.14007 3.39421 2.81098 3.29720 44 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01937 4.01937 1.46634 0.26236 1.09861 0.40547 45 3.10271 2.60411 3.15033 0.17642 45 - - 1.38629 1.38629 1.38629 1.38629 0.01846 4.00124 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:10:10 2012 NSEQ 11 EFFN 3.316650 CKSUM 3258118811 STATS LOCAL MSV -8.0583 0.71932 STATS LOCAL VITERBI -7.7146 0.71932 STATS LOCAL FORWARD -4.1884 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21217 1.44989 1.37425 1.53793 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 0.00000 * 1 0.14215 3.37833 2.80067 3.27981 1 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 2 2.47157 1.27607 2.54108 0.58405 2 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 3 0.14215 3.37833 2.80067 3.27981 3 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 4 3.08666 2.59390 3.13489 0.17899 4 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 5 2.94618 3.58579 0.11737 3.49026 5 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 6 0.14215 3.37833 2.80067 3.27981 6 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 7 3.43088 0.13047 3.48043 2.82738 7 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 8 3.43088 0.13047 3.48043 2.82738 8 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 9 3.08666 2.59390 3.13489 0.17899 9 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 10 3.43088 0.13047 3.48043 2.82738 10 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 11 0.14215 3.37833 2.80067 3.27981 11 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 12 2.94618 3.58579 0.11737 3.49026 12 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 13 3.08666 2.59390 3.13489 0.17899 13 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 14 2.94618 3.58579 0.11737 3.49026 14 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 15 2.94618 3.58579 0.11737 3.49026 15 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 16 2.94618 3.58579 0.11737 3.49026 16 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 17 2.94618 3.58579 0.11737 3.49026 17 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 18 3.08666 2.59390 3.13489 0.17899 18 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 19 0.14215 3.37833 2.80067 3.27981 19 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 20 2.94618 3.58579 0.11737 3.49026 20 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 21 2.94618 3.58579 0.11737 3.49026 21 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 22 0.14215 3.37833 2.80067 3.27981 22 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 23 3.43088 0.13047 3.48043 2.82738 23 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 24 0.14215 3.37833 2.80067 3.27981 24 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 25 0.14215 3.37833 2.80067 3.27981 25 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 26 3.43088 0.13047 3.48043 2.82738 26 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 27 3.43088 0.13047 3.48043 2.82738 27 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 28 3.43088 0.13047 3.48043 2.82738 28 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 29 2.94618 3.58579 0.11737 3.49026 29 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 30 3.43088 0.13047 3.48043 2.82738 30 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 31 3.08666 2.59390 3.13489 0.17899 31 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 32 0.14215 3.37833 2.80067 3.27981 32 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 33 2.94618 3.58579 0.11737 3.49026 33 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 34 0.14215 3.37833 2.80067 3.27981 34 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 35 3.43088 0.13047 3.48043 2.82738 35 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 36 3.08666 2.59390 3.13489 0.17899 36 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 37 3.08666 2.59390 3.13489 0.17899 37 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 38 0.14215 3.37833 2.80067 3.27981 38 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 39 0.14215 3.37833 2.80067 3.27981 39 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 40 2.94618 3.58579 0.11737 3.49026 40 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 41 3.43088 0.13047 3.48043 2.82738 41 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 42 0.14215 3.37833 2.80067 3.27981 42 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 43 3.08666 2.59390 3.13489 0.17899 43 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 44 0.14215 3.37833 2.80067 3.27981 44 - - 1.38629 1.38629 1.38629 1.38629 0.03693 4.01036 4.01036 1.46634 0.26236 1.09861 0.40547 45 3.08666 2.59390 3.13489 0.17899 45 - - 1.38629 1.38629 1.38629 1.38629 0.01863 3.99206 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:00 2012 NSEQ 7 EFFN 3.366699 CKSUM 366298019 STATS LOCAL MSV -8.0149 0.71932 STATS LOCAL VITERBI -7.6493 0.71932 STATS LOCAL FORWARD -3.9581 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.31469 1.38818 1.41406 1.43230 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 0.00000 * 1 0.14006 3.39425 2.81100 3.29724 1 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 2 3.10275 2.60413 3.15037 0.17641 2 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 3 2.95726 3.60193 0.11562 3.50808 3 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 4 3.10275 2.60413 3.15037 0.17641 4 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 5 2.95726 3.60193 0.11562 3.50808 5 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 6 1.05395 2.54981 0.72758 2.40493 6 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 7 3.44922 0.12830 3.49800 2.84071 7 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 8 3.44922 0.12830 3.49800 2.84071 8 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 9 3.10275 2.60413 3.15037 0.17641 9 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 10 3.44922 0.12830 3.49800 2.84071 10 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 11 0.14006 3.39425 2.81100 3.29724 11 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 12 3.44922 0.12830 3.49800 2.84071 12 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 13 3.10275 2.60413 3.15037 0.17641 13 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 14 2.95726 3.60193 0.11562 3.50808 14 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 15 2.95726 3.60193 0.11562 3.50808 15 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 16 2.95726 3.60193 0.11562 3.50808 16 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 17 2.95726 3.60193 0.11562 3.50808 17 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 18 3.10275 2.60413 3.15037 0.17641 18 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 19 0.14006 3.39425 2.81100 3.29724 19 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 20 0.14006 3.39425 2.81100 3.29724 20 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 21 2.95726 3.60193 0.11562 3.50808 21 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 22 0.14006 3.39425 2.81100 3.29724 22 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 23 3.44922 0.12830 3.49800 2.84071 23 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 24 3.10275 2.60413 3.15037 0.17641 24 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 25 0.14006 3.39425 2.81100 3.29724 25 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 26 3.44922 0.12830 3.49800 2.84071 26 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 27 3.44922 0.12830 3.49800 2.84071 27 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 28 3.44922 0.12830 3.49800 2.84071 28 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 29 2.95726 3.60193 0.11562 3.50808 29 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 30 3.44922 0.12830 3.49800 2.84071 30 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 31 3.10275 2.60413 3.15037 0.17641 31 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 32 0.14006 3.39425 2.81100 3.29724 32 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 33 2.95726 3.60193 0.11562 3.50808 33 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 34 0.14006 3.39425 2.81100 3.29724 34 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 35 3.44922 0.12830 3.49800 2.84071 35 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 36 3.10275 2.60413 3.15037 0.17641 36 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 37 3.10275 2.60413 3.15037 0.17641 37 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 38 0.14006 3.39425 2.81100 3.29724 38 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 39 0.14006 3.39425 2.81100 3.29724 39 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 40 2.95726 3.60193 0.11562 3.50808 40 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 41 3.44922 0.12830 3.49800 2.84071 41 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 42 0.14006 3.39425 2.81100 3.29724 42 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 43 3.10275 2.60413 3.15037 0.17641 43 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 44 0.14006 3.39425 2.81100 3.29724 44 - - 1.38629 1.38629 1.38629 1.38629 0.03659 4.01939 4.01939 1.46634 0.26236 1.09861 0.40547 45 3.10275 2.60413 3.15037 0.17641 45 - - 1.38629 1.38629 1.38629 1.38629 0.01846 4.00126 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:11:04 2012 NSEQ 4 EFFN 3.167969 CKSUM 3067086391 STATS LOCAL MSV -8.0355 0.71932 STATS LOCAL VITERBI -7.6329 0.71932 STATS LOCAL FORWARD -3.6630 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27595 1.33491 1.31386 1.66669 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 * 1 0.14880 3.32943 2.76878 3.22633 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 2 3.37444 0.13743 3.42635 2.78609 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 3 0.14880 3.32943 2.76878 3.22633 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 4 3.03758 2.56263 3.08768 0.18713 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 5 2.91173 3.53592 0.12299 3.43528 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 6 0.14880 3.32943 2.76878 3.22633 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 7 3.37444 0.13743 3.42635 2.78609 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 8 3.37444 0.13743 3.42635 2.78609 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 9 3.03758 2.56263 3.08768 0.18713 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 10 3.37444 0.13743 3.42635 2.78609 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 11 0.14880 3.32943 2.76878 3.22633 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 12 3.37444 0.13743 3.42635 2.78609 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 13 2.91173 3.53592 0.12299 3.43528 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 14 2.91173 3.53592 0.12299 3.43528 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 15 2.91173 3.53592 0.12299 3.43528 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 16 2.91173 3.53592 0.12299 3.43528 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 17 2.91173 3.53592 0.12299 3.43528 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 18 3.03758 2.56263 3.08768 0.18713 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 19 2.91173 3.53592 0.12299 3.43528 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 20 0.14880 3.32943 2.76878 3.22633 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 21 2.91173 3.53592 0.12299 3.43528 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 22 0.14880 3.32943 2.76878 3.22633 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 23 3.37444 0.13743 3.42635 2.78609 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 24 2.91173 3.53592 0.12299 3.43528 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 25 0.14880 3.32943 2.76878 3.22633 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 26 3.37444 0.13743 3.42635 2.78609 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 27 3.37444 0.13743 3.42635 2.78609 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 28 3.37444 0.13743 3.42635 2.78609 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 29 2.91173 3.53592 0.12299 3.43528 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 30 3.37444 0.13743 3.42635 2.78609 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 31 3.03758 2.56263 3.08768 0.18713 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 32 0.14880 3.32943 2.76878 3.22633 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 33 2.91173 3.53592 0.12299 3.43528 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 34 0.14880 3.32943 2.76878 3.22633 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 35 3.37444 0.13743 3.42635 2.78609 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 36 3.03758 2.56263 3.08768 0.18713 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 37 3.03758 2.56263 3.08768 0.18713 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 38 0.14880 3.32943 2.76878 3.22633 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 39 0.14880 3.32943 2.76878 3.22633 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 40 2.91173 3.53592 0.12299 3.43528 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 41 3.37444 0.13743 3.42635 2.78609 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 42 0.14880 3.32943 2.76878 3.22633 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 43 3.03758 2.56263 3.08768 0.18713 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 44 0.14880 3.32943 2.76878 3.22633 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547 45 3.03758 2.56263 3.08768 0.18713 45 - - 1.38629 1.38629 1.38629 1.38629 0.01917 3.96423 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:55 2012 NSEQ 6 EFFN 3.284180 CKSUM 23176094 STATS LOCAL MSV -7.9987 0.71932 STATS LOCAL VITERBI -7.5653 0.71932 STATS LOCAL FORWARD -4.0254 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21819 1.45984 1.52289 1.37089 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 0.00000 * 1 3.07610 2.58718 3.12474 0.18071 1 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 2 2.93885 3.57515 0.11855 3.47852 2 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 3 0.14354 3.36786 2.79386 3.26835 3 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 4 3.07610 2.58718 3.12474 0.18071 4 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 5 2.93885 3.57515 0.11855 3.47852 5 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 6 0.14354 3.36786 2.79386 3.26835 6 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 7 3.41881 0.13193 3.46887 2.81857 7 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 8 3.41881 0.13193 3.46887 2.81857 8 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 9 3.07610 2.58718 3.12474 0.18071 9 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 10 3.41881 0.13193 3.46887 2.81857 10 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 11 0.14354 3.36786 2.79386 3.26835 11 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 12 3.41881 0.13193 3.46887 2.81857 12 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 13 2.93885 3.57515 0.11855 3.47852 13 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 14 2.93885 3.57515 0.11855 3.47852 14 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 15 3.07610 2.58718 3.12474 0.18071 15 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 16 2.93885 3.57515 0.11855 3.47852 16 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 17 2.93885 3.57515 0.11855 3.47852 17 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 18 3.07610 2.58718 3.12474 0.18071 18 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 19 0.14354 3.36786 2.79386 3.26835 19 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 20 0.14354 3.36786 2.79386 3.26835 20 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 21 2.93885 3.57515 0.11855 3.47852 21 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 22 0.14354 3.36786 2.79386 3.26835 22 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 23 3.07610 2.58718 3.12474 0.18071 23 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 24 3.07610 2.58718 3.12474 0.18071 24 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 25 0.14354 3.36786 2.79386 3.26835 25 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 26 3.41881 0.13193 3.46887 2.81857 26 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 27 3.41881 0.13193 3.46887 2.81857 27 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 28 3.41881 0.13193 3.46887 2.81857 28 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 29 2.93885 3.57515 0.11855 3.47852 29 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 30 3.41881 0.13193 3.46887 2.81857 30 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 31 3.07610 2.58718 3.12474 0.18071 31 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 32 0.14354 3.36786 2.79386 3.26835 32 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 33 0.14354 3.36786 2.79386 3.26835 33 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 34 0.14354 3.36786 2.79386 3.26835 34 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 35 3.41881 0.13193 3.46887 2.81857 35 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 36 3.07610 2.58718 3.12474 0.18071 36 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 37 3.07610 2.58718 3.12474 0.18071 37 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 38 0.14354 3.36786 2.79386 3.26835 38 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 39 0.14354 3.36786 2.79386 3.26835 39 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 40 2.93885 3.57515 0.11855 3.47852 40 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 41 3.41881 0.13193 3.46887 2.81857 41 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 42 0.14354 3.36786 2.79386 3.26835 42 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 43 3.07610 2.58718 3.12474 0.18071 43 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 44 0.14354 3.36786 2.79386 3.26835 44 - - 1.38629 1.38629 1.38629 1.38629 0.03715 4.00445 4.00445 1.46634 0.26236 1.09861 0.40547 45 3.07610 2.58718 3.12474 0.18071 45 - - 1.38629 1.38629 1.38629 1.38629 0.01875 3.98605 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:09:01 2012 NSEQ 443 EFFN 3.268288 CKSUM 3859672082 STATS LOCAL MSV -8.1605 0.71933 STATS LOCAL VITERBI -7.5885 0.71933 STATS LOCAL FORWARD -4.0027 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27573 1.39145 1.37906 1.51301 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 0.00000 * 1 2.51173 3.35199 0.16864 3.24308 1 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 2 3.41285 0.13265 3.46316 2.81423 2 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 3 0.15579 3.31873 2.68834 3.21717 3 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 4 3.07091 2.58388 3.11974 0.18156 4 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 5 2.93523 3.56990 0.11913 3.47272 5 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 6 0.14424 3.36269 2.79050 3.26270 6 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 7 3.41285 0.13265 3.46316 2.81423 7 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 8 3.41285 0.13265 3.46316 2.81423 8 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 9 3.07091 2.58388 3.11974 0.18156 9 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 10 3.41285 0.13265 3.46316 2.81423 10 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 11 0.15579 3.31873 2.68834 3.21717 11 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 12 3.07091 2.58388 3.11974 0.18156 12 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 13 2.94141 2.28208 2.99477 0.22930 13 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 14 2.93523 3.56990 0.11913 3.47272 14 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 15 2.93523 3.56990 0.11913 3.47272 15 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 16 2.93523 3.56990 0.11913 3.47272 16 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 17 2.93523 3.56990 0.11913 3.47272 17 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 18 3.07091 2.58388 3.11974 0.18156 18 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 19 0.14424 3.36269 2.79050 3.26270 19 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 20 2.93523 3.56990 0.11913 3.47272 20 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 21 2.93523 3.56990 0.11913 3.47272 21 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 22 0.14424 3.36269 2.79050 3.26270 22 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 23 3.41285 0.13265 3.46316 2.81423 23 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 24 0.14424 3.36269 2.79050 3.26270 24 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 25 0.14424 3.36269 2.79050 3.26270 25 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 26 3.41285 0.13265 3.46316 2.81423 26 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 27 3.41285 0.13265 3.46316 2.81423 27 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 28 3.41285 0.13265 3.46316 2.81423 28 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 29 2.93523 3.56990 0.11913 3.47272 29 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 30 3.41285 0.13265 3.46316 2.81423 30 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 31 3.07091 2.58388 3.11974 0.18156 31 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 32 0.14424 3.36269 2.79050 3.26270 32 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 33 2.93523 3.56990 0.11913 3.47272 33 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 34 0.14424 3.36269 2.79050 3.26270 34 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 35 3.41285 0.13265 3.46316 2.81423 35 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 36 3.07091 2.58388 3.11974 0.18156 36 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 37 3.07091 2.58388 3.11974 0.18156 37 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 38 0.14424 3.36269 2.79050 3.26270 38 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 39 0.14424 3.36269 2.79050 3.26270 39 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 40 2.93523 3.56990 0.11913 3.47272 40 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 41 3.41285 0.13265 3.46316 2.81423 41 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 42 0.14424 3.36269 2.79050 3.26270 42 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 43 3.07091 2.58388 3.11974 0.18156 43 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 44 0.14424 3.36269 2.79050 3.26270 44 - - 1.38629 1.38629 1.38629 1.38629 0.03726 4.00155 4.00155 1.46634 0.26236 1.09861 0.40547 45 3.07091 2.58388 3.11974 0.18156 45 - - 1.38629 1.38629 1.38629 1.38629 0.01880 3.98310 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:10:45 2012 NSEQ 168 EFFN 3.319702 CKSUM 1179856698 STATS LOCAL MSV -8.0725 0.71933 STATS LOCAL VITERBI -7.5240 0.71933 STATS LOCAL FORWARD -3.7224 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33082 1.36653 1.24770 1.64204 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 0.00000 * 1 0.14202 3.37931 2.80130 3.28088 1 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 2 3.43201 0.13034 3.48151 2.82820 2 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 3 0.14202 3.37931 2.80130 3.28088 3 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 4 3.08765 2.59453 3.13584 0.17883 4 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 5 2.94686 3.58679 0.11727 3.49136 5 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 6 0.14202 3.37931 2.80130 3.28088 6 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 7 3.43201 0.13034 3.48151 2.82820 7 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 8 3.43201 0.13034 3.48151 2.82820 8 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 9 3.08765 2.59453 3.13584 0.17883 9 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 10 3.43201 0.13034 3.48151 2.82820 10 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 11 0.14202 3.37931 2.80130 3.28088 11 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 12 3.43201 0.13034 3.48151 2.82820 12 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 13 2.94686 3.58679 0.11727 3.49136 13 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 14 2.94686 3.58679 0.11727 3.49136 14 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 15 2.94686 3.58679 0.11727 3.49136 15 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 16 2.94686 3.58679 0.11727 3.49136 16 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 17 2.94686 3.58679 0.11727 3.49136 17 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 18 2.78284 1.93195 2.84216 0.30792 18 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 19 2.94686 3.58679 0.11727 3.49136 19 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 20 2.94686 3.58679 0.11727 3.49136 20 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 21 2.94686 3.58679 0.11727 3.49136 21 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 22 0.14202 3.37931 2.80130 3.28088 22 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 23 2.40431 0.92015 2.47659 0.85054 23 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 24 2.94686 3.58679 0.11727 3.49136 24 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 25 0.14202 3.37931 2.80130 3.28088 25 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 26 3.43201 0.13034 3.48151 2.82820 26 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 27 3.43201 0.13034 3.48151 2.82820 27 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 28 3.43201 0.13034 3.48151 2.82820 28 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 29 2.94686 3.58679 0.11727 3.49136 29 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 30 3.43201 0.13034 3.48151 2.82820 30 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 31 3.08765 2.59453 3.13584 0.17883 31 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 32 0.14202 3.37931 2.80130 3.28088 32 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 33 2.94686 3.58679 0.11727 3.49136 33 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 34 0.14202 3.37931 2.80130 3.28088 34 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 35 3.43201 0.13034 3.48151 2.82820 35 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 36 3.08765 2.59453 3.13584 0.17883 36 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 37 3.08765 2.59453 3.13584 0.17883 37 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 38 0.14202 3.37931 2.80130 3.28088 38 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 39 0.14202 3.37931 2.80130 3.28088 39 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 40 2.94686 3.58679 0.11727 3.49136 40 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 41 3.43201 0.13034 3.48151 2.82820 41 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 42 0.14202 3.37931 2.80130 3.28088 42 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 43 3.08765 2.59453 3.13584 0.17883 43 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 44 0.14202 3.37931 2.80130 3.28088 44 - - 1.38629 1.38629 1.38629 1.38629 0.03691 4.01091 4.01091 1.46634 0.26236 1.09861 0.40547 45 3.08765 2.59453 3.13584 0.17883 45 - - 1.38629 1.38629 1.38629 1.38629 0.01862 3.99263 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:31 2012 NSEQ 5 EFFN 3.217773 CKSUM 699182277 STATS LOCAL MSV -8.1467 0.71933 STATS LOCAL VITERBI -7.5859 0.71933 STATS LOCAL FORWARD -3.9876 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27721 1.39464 1.37671 1.51024 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 0.00000 * 1 2.92353 3.55295 0.12104 3.45404 1 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 2 3.39368 0.13501 3.44479 2.80020 2 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 3 0.14649 3.34608 2.77966 3.24453 3 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 4 3.05424 2.57325 3.10370 0.18432 4 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 5 2.92353 3.55295 0.12104 3.45404 5 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 6 0.14649 3.34608 2.77966 3.24453 6 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 7 3.39368 0.13501 3.44479 2.80020 7 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 8 3.39368 0.13501 3.44479 2.80020 8 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 9 3.05424 2.57325 3.10370 0.18432 9 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 10 3.39368 0.13501 3.44479 2.80020 10 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 11 0.14649 3.34608 2.77966 3.24453 11 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 12 3.05424 2.57325 3.10370 0.18432 12 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 13 3.05424 2.57325 3.10370 0.18432 13 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 14 2.92353 3.55295 0.12104 3.45404 14 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 15 2.92353 3.55295 0.12104 3.45404 15 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 16 2.92353 3.55295 0.12104 3.45404 16 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 17 2.92353 3.55295 0.12104 3.45404 17 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 18 3.05424 2.57325 3.10370 0.18432 18 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 19 0.14649 3.34608 2.77966 3.24453 19 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 20 2.92353 3.55295 0.12104 3.45404 20 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 21 2.92353 3.55295 0.12104 3.45404 21 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 22 0.14649 3.34608 2.77966 3.24453 22 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 23 3.39368 0.13501 3.44479 2.80020 23 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 24 0.14649 3.34608 2.77966 3.24453 24 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 25 0.14649 3.34608 2.77966 3.24453 25 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 26 3.39368 0.13501 3.44479 2.80020 26 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 27 3.39368 0.13501 3.44479 2.80020 27 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 28 3.39368 0.13501 3.44479 2.80020 28 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 29 2.92353 3.55295 0.12104 3.45404 29 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 30 3.39368 0.13501 3.44479 2.80020 30 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 31 3.05424 2.57325 3.10370 0.18432 31 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 32 0.14649 3.34608 2.77966 3.24453 32 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 33 2.92353 3.55295 0.12104 3.45404 33 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 34 0.14649 3.34608 2.77966 3.24453 34 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 35 3.39368 0.13501 3.44479 2.80020 35 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 36 3.05424 2.57325 3.10370 0.18432 36 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 37 3.05424 2.57325 3.10370 0.18432 37 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 38 0.14649 3.34608 2.77966 3.24453 38 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 39 0.14649 3.34608 2.77966 3.24453 39 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 40 2.92353 3.55295 0.12104 3.45404 40 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 41 3.39368 0.13501 3.44479 2.80020 41 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 42 0.14649 3.34608 2.77966 3.24453 42 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 43 3.05424 2.57325 3.10370 0.18432 43 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 44 0.14649 3.34608 2.77966 3.24453 44 - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99227 3.99227 1.46634 0.26236 1.09861 0.40547 45 3.05424 2.57325 3.10370 0.18432 45 - - 1.38629 1.38629 1.38629 1.38629 0.01898 3.97364 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:10:34 2012 NSEQ 11 EFFN 3.236084 CKSUM 2884466154 STATS LOCAL MSV -8.0495 0.71933 STATS LOCAL VITERBI -7.7239 0.71933 STATS LOCAL FORWARD -3.9426 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16088 1.46591 1.44654 1.51167 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 0.00000 * 1 0.14567 3.35213 2.78361 3.25115 1 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 2 3.40067 0.13415 3.45149 2.80532 2 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 3 0.14567 3.35213 2.78361 3.25115 3 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 4 3.06030 2.57712 3.10954 0.18331 4 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 5 0.14567 3.35213 2.78361 3.25115 5 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 6 0.14567 3.35213 2.78361 3.25115 6 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 7 3.40067 0.13415 3.45149 2.80532 7 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 8 3.40067 0.13415 3.45149 2.80532 8 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 9 3.06030 2.57712 3.10954 0.18331 9 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 10 3.40067 0.13415 3.45149 2.80532 10 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 11 0.14567 3.35213 2.78361 3.25115 11 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 12 2.92780 3.55913 0.12034 3.46085 12 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 13 3.06030 2.57712 3.10954 0.18331 13 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 14 2.92780 3.55913 0.12034 3.46085 14 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 15 2.92780 3.55913 0.12034 3.46085 15 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 16 2.92780 3.55913 0.12034 3.46085 16 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 17 2.92780 3.55913 0.12034 3.46085 17 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 18 3.06030 2.57712 3.10954 0.18331 18 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 19 0.14567 3.35213 2.78361 3.25115 19 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 20 2.92780 3.55913 0.12034 3.46085 20 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 21 2.92780 3.55913 0.12034 3.46085 21 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 22 0.14567 3.35213 2.78361 3.25115 22 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 23 0.14567 3.35213 2.78361 3.25115 23 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 24 3.06030 2.57712 3.10954 0.18331 24 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 25 0.14567 3.35213 2.78361 3.25115 25 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 26 3.40067 0.13415 3.45149 2.80532 26 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 27 3.40067 0.13415 3.45149 2.80532 27 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 28 3.40067 0.13415 3.45149 2.80532 28 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 29 2.92780 3.55913 0.12034 3.46085 29 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 30 3.40067 0.13415 3.45149 2.80532 30 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 31 3.06030 2.57712 3.10954 0.18331 31 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 32 0.14567 3.35213 2.78361 3.25115 32 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 33 2.92780 3.55913 0.12034 3.46085 33 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 34 0.14567 3.35213 2.78361 3.25115 34 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 35 3.40067 0.13415 3.45149 2.80532 35 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 36 3.06030 2.57712 3.10954 0.18331 36 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 37 3.06030 2.57712 3.10954 0.18331 37 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 38 0.14567 3.35213 2.78361 3.25115 38 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 39 0.14567 3.35213 2.78361 3.25115 39 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 40 2.92780 3.55913 0.12034 3.46085 40 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 41 3.40067 0.13415 3.45149 2.80532 41 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 42 0.14567 3.35213 2.78361 3.25115 42 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 43 3.06030 2.57712 3.10954 0.18331 43 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 44 0.14567 3.35213 2.78361 3.25115 44 - - 1.38629 1.38629 1.38629 1.38629 0.03749 3.99564 3.99564 1.46634 0.26236 1.09861 0.40547 45 3.06030 2.57712 3.10954 0.18331 45 - - 1.38629 1.38629 1.38629 1.38629 0.01892 3.97708 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:12:21 2012 NSEQ 63 EFFN 3.264587 CKSUM 384028687 STATS LOCAL MSV -8.1554 0.71933 STATS LOCAL VITERBI -7.5944 0.71933 STATS LOCAL FORWARD -3.9770 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34567 1.32431 1.44876 1.43219 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 0.00000 * 1 3.06969 2.58310 3.11857 0.18176 1 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 2 3.06969 2.58310 3.11857 0.18176 2 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 3 2.93438 3.56866 0.11927 3.47136 3 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 4 2.93438 3.56866 0.11927 3.47136 4 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 5 3.06969 2.58310 3.11857 0.18176 5 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 6 2.93438 3.56866 0.11927 3.47136 6 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 7 3.41145 0.13282 3.46183 2.81321 7 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 8 3.41145 0.13282 3.46183 2.81321 8 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 9 3.06969 2.58310 3.11857 0.18176 9 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 10 3.41145 0.13282 3.46183 2.81321 10 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 11 0.14440 3.36148 2.78971 3.26137 11 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 12 3.41145 0.13282 3.46183 2.81321 12 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 13 3.06969 2.58310 3.11857 0.18176 13 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 14 2.93438 3.56866 0.11927 3.47136 14 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 15 3.06969 2.58310 3.11857 0.18176 15 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 16 2.93438 3.56866 0.11927 3.47136 16 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 17 2.93438 3.56866 0.11927 3.47136 17 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 18 3.41145 0.13282 3.46183 2.81321 18 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 19 0.14440 3.36148 2.78971 3.26137 19 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 20 0.14440 3.36148 2.78971 3.26137 20 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 21 2.93438 3.56866 0.11927 3.47136 21 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 22 0.14440 3.36148 2.78971 3.26137 22 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 23 3.41145 0.13282 3.46183 2.81321 23 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 24 0.20303 3.15942 2.36577 3.04868 24 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 25 0.14440 3.36148 2.78971 3.26137 25 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 26 3.41145 0.13282 3.46183 2.81321 26 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 27 3.41145 0.13282 3.46183 2.81321 27 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 28 3.41145 0.13282 3.46183 2.81321 28 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 29 2.93438 3.56866 0.11927 3.47136 29 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 30 3.41145 0.13282 3.46183 2.81321 30 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 31 3.06969 2.58310 3.11857 0.18176 31 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 32 0.14440 3.36148 2.78971 3.26137 32 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 33 2.93438 3.56866 0.11927 3.47136 33 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 34 0.14440 3.36148 2.78971 3.26137 34 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 35 3.41145 0.13282 3.46183 2.81321 35 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 36 3.06969 2.58310 3.11857 0.18176 36 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 37 3.06969 2.58310 3.11857 0.18176 37 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 38 0.14440 3.36148 2.78971 3.26137 38 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 39 0.14440 3.36148 2.78971 3.26137 39 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 40 2.93438 3.56866 0.11927 3.47136 40 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 41 3.41145 0.13282 3.46183 2.81321 41 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 42 0.14440 3.36148 2.78971 3.26137 42 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 43 3.06969 2.58310 3.11857 0.18176 43 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 44 0.14440 3.36148 2.78971 3.26137 44 - - 1.38629 1.38629 1.38629 1.38629 0.03729 4.00087 4.00087 1.46634 0.26236 1.09861 0.40547 45 3.06969 2.58310 3.11857 0.18176 45 - - 1.38629 1.38629 1.38629 1.38629 0.01882 3.98240 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:11:13 2012 NSEQ 20 EFFN 3.168945 CKSUM 1545031769 STATS LOCAL MSV -8.1609 0.71932 STATS LOCAL VITERBI -7.5217 0.71932 STATS LOCAL FORWARD -3.6571 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27594 1.33490 1.31386 1.66672 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 * 1 0.14875 3.32976 2.76899 3.22669 1 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 2 3.37482 0.13738 3.42671 2.78637 2 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 3 0.14875 3.32976 2.76899 3.22669 3 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 4 3.03791 2.56284 3.08799 0.18707 4 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 5 2.91196 3.53626 0.12295 3.43565 5 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 6 0.14875 3.32976 2.76899 3.22669 6 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 7 3.37482 0.13738 3.42671 2.78637 7 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 8 3.37482 0.13738 3.42671 2.78637 8 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 9 3.03791 2.56284 3.08799 0.18707 9 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 10 3.37482 0.13738 3.42671 2.78637 10 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 11 0.14875 3.32976 2.76899 3.22669 11 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 12 3.37482 0.13738 3.42671 2.78637 12 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 13 2.91196 3.53626 0.12295 3.43565 13 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 14 2.91196 3.53626 0.12295 3.43565 14 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 15 2.91196 3.53626 0.12295 3.43565 15 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 16 2.91196 3.53626 0.12295 3.43565 16 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 17 2.91196 3.53626 0.12295 3.43565 17 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 18 3.37482 0.13738 3.42671 2.78637 18 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 19 0.14875 3.32976 2.76899 3.22669 19 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 20 2.91196 3.53626 0.12295 3.43565 20 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 21 2.91196 3.53626 0.12295 3.43565 21 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 22 0.14875 3.32976 2.76899 3.22669 22 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 23 3.03791 2.56284 3.08799 0.18707 23 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 24 2.91196 3.53626 0.12295 3.43565 24 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 25 0.14875 3.32976 2.76899 3.22669 25 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 26 3.37482 0.13738 3.42671 2.78637 26 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 27 3.37482 0.13738 3.42671 2.78637 27 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 28 3.37482 0.13738 3.42671 2.78637 28 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 29 2.91196 3.53626 0.12295 3.43565 29 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 30 3.37482 0.13738 3.42671 2.78637 30 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 31 3.03791 2.56284 3.08799 0.18707 31 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 32 0.14875 3.32976 2.76899 3.22669 32 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 33 2.91196 3.53626 0.12295 3.43565 33 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 34 0.14875 3.32976 2.76899 3.22669 34 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 35 3.37482 0.13738 3.42671 2.78637 35 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 36 3.03791 2.56284 3.08799 0.18707 36 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 37 3.03791 2.56284 3.08799 0.18707 37 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 38 0.14875 3.32976 2.76899 3.22669 38 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 39 0.14875 3.32976 2.76899 3.22669 39 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 40 2.91196 3.53626 0.12295 3.43565 40 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 41 3.37482 0.13738 3.42671 2.78637 41 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 42 0.14875 3.32976 2.76899 3.22669 42 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 43 3.03791 2.56284 3.08799 0.18707 43 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 44 0.14875 3.32976 2.76899 3.22669 44 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 45 3.03791 2.56284 3.08799 0.18707 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96442 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:11:48 2012 NSEQ 6 EFFN 3.184570 CKSUM 2290620195 STATS LOCAL MSV -8.0710 0.71933 STATS LOCAL VITERBI -7.6213 0.71933 STATS LOCAL FORWARD -3.6362 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22012 1.27066 1.45090 1.66179 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 0.00000 * 1 0.14802 3.33501 2.77243 3.23243 1 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 2 3.38089 0.13661 3.43253 2.79082 2 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 3 3.04316 2.56619 3.09304 0.18618 3 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 4 3.04316 2.56619 3.09304 0.18618 4 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 5 0.14802 3.33501 2.77243 3.23243 5 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 6 0.14802 3.33501 2.77243 3.23243 6 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 7 3.38089 0.13661 3.43253 2.79082 7 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 8 3.38089 0.13661 3.43253 2.79082 8 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 9 3.04316 2.56619 3.09304 0.18618 9 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 10 3.38089 0.13661 3.43253 2.79082 10 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 11 0.14802 3.33501 2.77243 3.23243 11 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 12 3.38089 0.13661 3.43253 2.79082 12 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 13 2.91569 3.54163 0.12233 3.44157 13 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 14 2.91569 3.54163 0.12233 3.44157 14 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 15 2.91569 3.54163 0.12233 3.44157 15 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 16 2.91569 3.54163 0.12233 3.44157 16 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 17 2.91569 3.54163 0.12233 3.44157 17 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 18 3.38089 0.13661 3.43253 2.79082 18 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 19 0.14802 3.33501 2.77243 3.23243 19 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 20 0.14802 3.33501 2.77243 3.23243 20 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 21 2.91569 3.54163 0.12233 3.44157 21 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 22 0.14802 3.33501 2.77243 3.23243 22 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 23 3.38089 0.13661 3.43253 2.79082 23 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 24 2.91569 3.54163 0.12233 3.44157 24 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 25 0.14802 3.33501 2.77243 3.23243 25 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 26 3.38089 0.13661 3.43253 2.79082 26 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 27 3.38089 0.13661 3.43253 2.79082 27 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 28 3.38089 0.13661 3.43253 2.79082 28 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 29 2.91569 3.54163 0.12233 3.44157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 30 3.38089 0.13661 3.43253 2.79082 30 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 31 3.04316 2.56619 3.09304 0.18618 31 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 32 0.14802 3.33501 2.77243 3.23243 32 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 33 2.91569 3.54163 0.12233 3.44157 33 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 34 0.14802 3.33501 2.77243 3.23243 34 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 35 3.38089 0.13661 3.43253 2.79082 35 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 36 3.04316 2.56619 3.09304 0.18618 36 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 37 3.04316 2.56619 3.09304 0.18618 37 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 38 0.14802 3.33501 2.77243 3.23243 38 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 39 0.14802 3.33501 2.77243 3.23243 39 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 40 2.91569 3.54163 0.12233 3.44157 40 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 41 3.38089 0.13661 3.43253 2.79082 41 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 42 0.14802 3.33501 2.77243 3.23243 42 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 43 3.04316 2.56619 3.09304 0.18618 43 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 44 0.14802 3.33501 2.77243 3.23243 44 - - 1.38629 1.38629 1.38629 1.38629 0.03785 3.98612 3.98612 1.46634 0.26236 1.09861 0.40547 45 3.04316 2.56619 3.09304 0.18618 45 - - 1.38629 1.38629 1.38629 1.38629 0.01910 3.96738 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:16:53 2012 NSEQ 12 EFFN 3.178711 CKSUM 1818463421 STATS LOCAL MSV -8.1382 0.71931 STATS LOCAL VITERBI -7.4802 0.71931 STATS LOCAL FORWARD -4.0034 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33851 1.39624 1.25226 1.58778 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 * 1 3.37862 0.13690 3.43035 2.78916 1 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 2 3.37862 0.13690 3.43035 2.78916 2 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 3 0.14829 3.33304 2.77114 3.23028 3 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 4 3.37862 0.13690 3.43035 2.78916 4 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 5 3.04119 2.56493 3.09115 0.18651 5 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 6 2.91430 3.53962 0.12257 3.43936 6 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 7 3.37862 0.13690 3.43035 2.78916 7 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 8 2.91430 3.53962 0.12257 3.43936 8 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 9 3.04119 2.56493 3.09115 0.18651 9 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 10 2.91430 3.53962 0.12257 3.43936 10 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 11 0.14829 3.33304 2.77114 3.23028 11 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 12 3.04119 2.56493 3.09115 0.18651 12 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 13 3.37862 0.13690 3.43035 2.78916 13 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 14 2.91430 3.53962 0.12257 3.43936 14 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 15 0.14829 3.33304 2.77114 3.23028 15 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 16 3.37862 0.13690 3.43035 2.78916 16 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 17 2.91430 3.53962 0.12257 3.43936 17 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 18 3.04119 2.56493 3.09115 0.18651 18 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 19 2.91430 3.53962 0.12257 3.43936 19 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 20 2.91430 3.53962 0.12257 3.43936 20 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 21 2.91430 3.53962 0.12257 3.43936 21 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 22 0.14829 3.33304 2.77114 3.23028 22 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 23 3.37862 0.13690 3.43035 2.78916 23 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 24 2.91430 3.53962 0.12257 3.43936 24 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 25 0.14829 3.33304 2.77114 3.23028 25 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 26 3.37862 0.13690 3.43035 2.78916 26 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 27 2.91430 3.53962 0.12257 3.43936 27 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 28 2.91430 3.53962 0.12257 3.43936 28 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 29 2.91430 3.53962 0.12257 3.43936 29 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 30 3.37862 0.13690 3.43035 2.78916 30 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 31 3.04119 2.56493 3.09115 0.18651 31 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 32 0.14829 3.33304 2.77114 3.23028 32 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 33 0.14829 3.33304 2.77114 3.23028 33 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 34 0.14829 3.33304 2.77114 3.23028 34 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 35 3.37862 0.13690 3.43035 2.78916 35 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 36 3.04119 2.56493 3.09115 0.18651 36 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 37 3.04119 2.56493 3.09115 0.18651 37 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 38 0.14829 3.33304 2.77114 3.23028 38 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 39 0.14829 3.33304 2.77114 3.23028 39 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 40 2.91430 3.53962 0.12257 3.43936 40 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 41 3.37862 0.13690 3.43035 2.78916 41 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 42 0.14829 3.33304 2.77114 3.23028 42 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 43 3.04119 2.56493 3.09115 0.18651 43 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 44 0.14829 3.33304 2.77114 3.23028 44 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 45 3.04119 2.56493 3.09115 0.18651 45 - - 1.38629 1.38629 1.38629 1.38629 0.01913 3.96627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:09:59 2012 NSEQ 25 EFFN 3.225708 CKSUM 2442280785 STATS LOCAL MSV -8.0875 0.71932 STATS LOCAL VITERBI -7.6924 0.71932 STATS LOCAL FORWARD -4.2101 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27866 1.32691 1.45131 1.50495 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 0.00000 * 1 3.05687 2.57493 3.10623 0.18388 1 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 2 3.39671 0.13463 3.44770 2.80242 2 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 3 0.14613 3.34871 2.78138 3.24740 3 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 4 3.05687 2.57493 3.10623 0.18388 4 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 5 2.92539 3.55564 0.12073 3.45700 5 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 6 0.14613 3.34871 2.78138 3.24740 6 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 7 3.39671 0.13463 3.44770 2.80242 7 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 8 3.39671 0.13463 3.44770 2.80242 8 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 9 3.05687 2.57493 3.10623 0.18388 9 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 10 3.39671 0.13463 3.44770 2.80242 10 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 11 0.14613 3.34871 2.78138 3.24740 11 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 12 3.05687 2.57493 3.10623 0.18388 12 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 13 3.39671 0.13463 3.44770 2.80242 13 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 14 2.92539 3.55564 0.12073 3.45700 14 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 15 2.92539 3.55564 0.12073 3.45700 15 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 16 2.92539 3.55564 0.12073 3.45700 16 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 17 2.92539 3.55564 0.12073 3.45700 17 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 18 3.05687 2.57493 3.10623 0.18388 18 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 19 0.14613 3.34871 2.78138 3.24740 19 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 20 2.92539 3.55564 0.12073 3.45700 20 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 21 2.92539 3.55564 0.12073 3.45700 21 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 22 0.14613 3.34871 2.78138 3.24740 22 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 23 3.39671 0.13463 3.44770 2.80242 23 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 24 0.14613 3.34871 2.78138 3.24740 24 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 25 0.14613 3.34871 2.78138 3.24740 25 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 26 3.39671 0.13463 3.44770 2.80242 26 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 27 3.39671 0.13463 3.44770 2.80242 27 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 28 3.39671 0.13463 3.44770 2.80242 28 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 29 2.92539 3.55564 0.12073 3.45700 29 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 30 3.39671 0.13463 3.44770 2.80242 30 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 31 3.05687 2.57493 3.10623 0.18388 31 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 32 0.14613 3.34871 2.78138 3.24740 32 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 33 2.92539 3.55564 0.12073 3.45700 33 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 34 0.14613 3.34871 2.78138 3.24740 34 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 35 3.39671 0.13463 3.44770 2.80242 35 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 36 3.05687 2.57493 3.10623 0.18388 36 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 37 3.05687 2.57493 3.10623 0.18388 37 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 38 0.14613 3.34871 2.78138 3.24740 38 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 39 0.14613 3.34871 2.78138 3.24740 39 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 40 2.92539 3.55564 0.12073 3.45700 40 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 41 3.39671 0.13463 3.44770 2.80242 41 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 42 0.14613 3.34871 2.78138 3.24740 42 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 43 3.05687 2.57493 3.10623 0.18388 43 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 44 0.14613 3.34871 2.78138 3.24740 44 - - 1.38629 1.38629 1.38629 1.38629 0.03756 3.99373 3.99373 1.46634 0.26236 1.09861 0.40547 45 3.05687 2.57493 3.10623 0.18388 45 - - 1.38629 1.38629 1.38629 1.38629 0.01896 3.97513 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:11:37 2012 NSEQ 8 EFFN 3.199219 CKSUM 978999727 STATS LOCAL MSV -8.0581 0.71932 STATS LOCAL VITERBI -7.6483 0.71932 STATS LOCAL FORWARD -4.0748 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11056 1.40113 1.44532 1.66794 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 0.00000 * 1 0.14734 3.33991 2.77563 3.23778 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 2 3.38655 0.13590 3.43796 2.79498 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 3 0.14734 3.33991 2.77563 3.23778 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 4 3.04806 2.56931 3.09775 0.18535 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 5 2.91917 3.54665 0.12176 3.44709 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 6 0.14734 3.33991 2.77563 3.23778 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 7 3.04806 2.56931 3.09775 0.18535 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 8 3.38655 0.13590 3.43796 2.79498 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 9 3.04806 2.56931 3.09775 0.18535 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 10 3.38655 0.13590 3.43796 2.79498 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 11 0.14734 3.33991 2.77563 3.23778 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 12 0.14734 3.33991 2.77563 3.23778 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 13 2.91917 3.54665 0.12176 3.44709 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 14 2.91917 3.54665 0.12176 3.44709 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 15 2.91917 3.54665 0.12176 3.44709 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 16 2.91917 3.54665 0.12176 3.44709 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 17 2.91917 3.54665 0.12176 3.44709 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 18 3.38655 0.13590 3.43796 2.79498 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 19 0.14734 3.33991 2.77563 3.23778 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 20 0.14734 3.33991 2.77563 3.23778 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 21 2.91917 3.54665 0.12176 3.44709 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 22 0.14734 3.33991 2.77563 3.23778 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 23 3.38655 0.13590 3.43796 2.79498 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 24 0.14734 3.33991 2.77563 3.23778 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 25 0.14734 3.33991 2.77563 3.23778 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 26 3.38655 0.13590 3.43796 2.79498 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 27 3.38655 0.13590 3.43796 2.79498 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 28 3.38655 0.13590 3.43796 2.79498 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 29 2.91917 3.54665 0.12176 3.44709 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 30 3.38655 0.13590 3.43796 2.79498 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 31 3.04806 2.56931 3.09775 0.18535 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 32 0.14734 3.33991 2.77563 3.23778 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 33 2.91917 3.54665 0.12176 3.44709 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 34 0.14734 3.33991 2.77563 3.23778 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 35 3.38655 0.13590 3.43796 2.79498 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 36 3.04806 2.56931 3.09775 0.18535 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 37 3.04806 2.56931 3.09775 0.18535 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 38 0.14734 3.33991 2.77563 3.23778 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 39 0.14734 3.33991 2.77563 3.23778 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 40 2.91917 3.54665 0.12176 3.44709 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 41 3.38655 0.13590 3.43796 2.79498 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 42 0.14734 3.33991 2.77563 3.23778 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 43 3.04806 2.56931 3.09775 0.18535 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 44 0.14734 3.33991 2.77563 3.23778 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98884 3.98884 1.46634 0.26236 1.09861 0.40547 45 3.04806 2.56931 3.09775 0.18535 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97014 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:13:13 2012 NSEQ 69 EFFN 3.423889 CKSUM 3251613800 STATS LOCAL MSV -7.1348 0.71932 STATS LOCAL VITERBI -7.5611 0.71932 STATS LOCAL FORWARD -3.9801 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.53531 1.56822 1.24279 1.24613 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 0.00000 * 1 1.67803 0.68418 1.77706 1.96882 1 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 2 0.13776 3.41212 2.82258 3.31682 2 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 3 3.12089 2.61565 3.16780 0.17356 3 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 4 3.12089 2.61565 3.16780 0.17356 4 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 5 2.96962 3.61999 0.11369 3.52803 5 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 6 2.96962 3.61999 0.11369 3.52803 6 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 7 3.46979 0.12592 3.51768 2.85562 7 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 8 3.46979 0.12592 3.51768 2.85562 8 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 9 3.12089 2.61565 3.16780 0.17356 9 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 10 3.46979 0.12592 3.51768 2.85562 10 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 11 0.13776 3.41212 2.82258 3.31682 11 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 12 2.96962 3.61999 0.11369 3.52803 12 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 13 3.12089 2.61565 3.16780 0.17356 13 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 14 3.12089 2.61565 3.16780 0.17356 14 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 15 2.96962 3.61999 0.11369 3.52803 15 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 16 2.96962 3.61999 0.11369 3.52803 16 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 17 2.96962 3.61999 0.11369 3.52803 17 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 18 3.12089 2.61565 3.16780 0.17356 18 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 19 2.96962 3.61999 0.11369 3.52803 19 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 20 2.96962 3.61999 0.11369 3.52803 20 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 21 2.96962 3.61999 0.11369 3.52803 21 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 22 0.13776 3.41212 2.82258 3.31682 22 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 23 3.12089 2.61565 3.16780 0.17356 23 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 24 2.96962 3.61999 0.11369 3.52803 24 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 25 0.13776 3.41212 2.82258 3.31682 25 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 26 3.46979 0.12592 3.51768 2.85562 26 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 27 3.46979 0.12592 3.51768 2.85562 27 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 28 3.46979 0.12592 3.51768 2.85562 28 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 29 2.96962 3.61999 0.11369 3.52803 29 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 30 3.46979 0.12592 3.51768 2.85562 30 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 31 3.12089 2.61565 3.16780 0.17356 31 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 32 3.12089 2.61565 3.16780 0.17356 32 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 33 2.96962 3.61999 0.11369 3.52803 33 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 34 0.13776 3.41212 2.82258 3.31682 34 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 35 3.12089 2.61565 3.16780 0.17356 35 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 36 3.12089 2.61565 3.16780 0.17356 36 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 37 3.12089 2.61565 3.16780 0.17356 37 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 38 0.13776 3.41212 2.82258 3.31682 38 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 39 0.13776 3.41212 2.82258 3.31682 39 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 40 2.96962 3.61999 0.11369 3.52803 40 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 41 3.46979 0.12592 3.51768 2.85562 41 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 42 0.13776 3.41212 2.82258 3.31682 42 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 43 3.12089 2.61565 3.16780 0.17356 43 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 44 0.13776 3.41212 2.82258 3.31682 44 - - 1.38629 1.38629 1.38629 1.38629 0.03621 4.02961 4.02961 1.46634 0.26236 1.09861 0.40547 45 3.12089 2.61565 3.16780 0.17356 45 - - 1.38629 1.38629 1.38629 1.38629 0.01827 4.01167 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:16:25 2012 NSEQ 2 EFFN 2.000000 CKSUM 560215678 STATS LOCAL MSV -7.3978 0.72836 STATS LOCAL VITERBI -8.2232 0.72836 STATS LOCAL FORWARD -3.2345 0.72836 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34337 1.39360 1.49698 1.32032 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.53331 3.02441 0.20344 2.88069 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:15:58 2012 NSEQ 71 EFFN 3.384460 CKSUM 2479778242 STATS LOCAL MSV -7.4352 0.71933 STATS LOCAL VITERBI -7.7391 0.71933 STATS LOCAL FORWARD -3.8809 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27754 1.33244 1.60292 1.36205 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 0.00000 * 1 2.56339 0.36286 2.05390 2.31226 1 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 2 3.10841 2.60773 3.15581 0.17552 2 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 3 3.10841 2.60773 3.15581 0.17552 3 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 4 3.10841 2.60773 3.15581 0.17552 4 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 5 0.13934 3.39984 2.81462 3.30336 5 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 6 0.13934 3.39984 2.81462 3.30336 6 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 7 3.10841 2.60773 3.15581 0.17552 7 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 8 3.45565 0.12755 3.50415 2.84538 8 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 9 3.10841 2.60773 3.15581 0.17552 9 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 10 3.45565 0.12755 3.50415 2.84538 10 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 11 0.13934 3.39984 2.81462 3.30336 11 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 12 0.13934 3.39984 2.81462 3.30336 12 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 13 3.45565 0.12755 3.50415 2.84538 13 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 14 3.10841 2.60773 3.15581 0.17552 14 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 15 3.45565 0.12755 3.50415 2.84538 15 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 16 2.96113 3.60758 0.11501 3.51432 16 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 17 2.96113 3.60758 0.11501 3.51432 17 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 18 2.96113 3.60758 0.11501 3.51432 18 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 19 3.10841 2.60773 3.15581 0.17552 19 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 20 0.16860 3.29082 2.56771 3.18887 20 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 21 2.96113 3.60758 0.11501 3.51432 21 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 22 2.96113 3.60758 0.11501 3.51432 22 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 23 0.13934 3.39984 2.81462 3.30336 23 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 24 3.45565 0.12755 3.50415 2.84538 24 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 25 3.10841 2.60773 3.15581 0.17552 25 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 26 0.13934 3.39984 2.81462 3.30336 26 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 27 3.45565 0.12755 3.50415 2.84538 27 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 28 3.45565 0.12755 3.50415 2.84538 28 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 29 3.45565 0.12755 3.50415 2.84538 29 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 30 2.96113 3.60758 0.11501 3.51432 30 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 31 3.45565 0.12755 3.50415 2.84538 31 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 32 3.10841 2.60773 3.15581 0.17552 32 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 33 2.96113 3.60758 0.11501 3.51432 33 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 34 0.13934 3.39984 2.81462 3.30336 34 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 35 0.13934 3.39984 2.81462 3.30336 35 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 36 3.45565 0.12755 3.50415 2.84538 36 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 37 3.10841 2.60773 3.15581 0.17552 37 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 38 3.10841 2.60773 3.15581 0.17552 38 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 39 0.13934 3.39984 2.81462 3.30336 39 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 40 0.13934 3.39984 2.81462 3.30336 40 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 41 2.96113 3.60758 0.11501 3.51432 41 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 42 3.45565 0.12755 3.50415 2.84538 42 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 43 0.13934 3.39984 2.81462 3.30336 43 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 44 3.10841 2.60773 3.15581 0.17552 44 - - 1.38629 1.38629 1.38629 1.38629 0.03647 4.02257 4.02257 1.46634 0.26236 1.09861 0.40547 45 0.13934 3.39984 2.81462 3.30336 45 - - 1.38629 1.38629 1.38629 1.38629 0.01840 4.00450 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:15:51 2012 NSEQ 65 EFFN 3.265076 CKSUM 3550671071 STATS LOCAL MSV -7.9381 0.71931 STATS LOCAL VITERBI -7.5951 0.71931 STATS LOCAL FORWARD -3.9440 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28066 1.26069 1.61345 1.42926 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 0.00000 * 1 3.06985 2.58320 3.11872 0.18173 1 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 2 3.06985 2.58320 3.11872 0.18173 2 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 3 3.06985 2.58320 3.11872 0.18173 3 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 4 0.14438 3.36164 2.78981 3.26155 4 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 5 3.41164 0.13280 3.46200 2.81334 5 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 6 0.14438 3.36164 2.78981 3.26155 6 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 7 3.41164 0.13280 3.46200 2.81334 7 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 8 3.41164 0.13280 3.46200 2.81334 8 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 9 3.06985 2.58320 3.11872 0.18173 9 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 10 3.41164 0.13280 3.46200 2.81334 10 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 11 0.14438 3.36164 2.78981 3.26155 11 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 12 0.14438 3.36164 2.78981 3.26155 12 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 13 3.41164 0.13280 3.46200 2.81334 13 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 14 3.06985 2.58320 3.11872 0.18173 14 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 15 3.41164 0.13280 3.46200 2.81334 15 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 16 2.93449 3.56883 0.11925 3.47154 16 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 17 2.93449 3.56883 0.11925 3.47154 17 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 18 2.93449 3.56883 0.11925 3.47154 18 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 19 3.06985 2.58320 3.11872 0.18173 19 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 20 0.14438 3.36164 2.78981 3.26155 20 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 21 2.93449 3.56883 0.11925 3.47154 21 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 22 2.93449 3.56883 0.11925 3.47154 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 23 0.14438 3.36164 2.78981 3.26155 23 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 24 3.41164 0.13280 3.46200 2.81334 24 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 25 3.06985 2.58320 3.11872 0.18173 25 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 26 0.14438 3.36164 2.78981 3.26155 26 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 27 3.41164 0.13280 3.46200 2.81334 27 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 28 3.41164 0.13280 3.46200 2.81334 28 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 29 3.41164 0.13280 3.46200 2.81334 29 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 30 2.93449 3.56883 0.11925 3.47154 30 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 31 3.41164 0.13280 3.46200 2.81334 31 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 32 3.06985 2.58320 3.11872 0.18173 32 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 33 2.93449 3.56883 0.11925 3.47154 33 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 34 0.14438 3.36164 2.78981 3.26155 34 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 35 0.14438 3.36164 2.78981 3.26155 35 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 36 3.41164 0.13280 3.46200 2.81334 36 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 37 3.06985 2.58320 3.11872 0.18173 37 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 38 3.06985 2.58320 3.11872 0.18173 38 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 39 0.14438 3.36164 2.78981 3.26155 39 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 40 0.14438 3.36164 2.78981 3.26155 40 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 41 2.93449 3.56883 0.11925 3.47154 41 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 42 3.41164 0.13280 3.46200 2.81334 42 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 43 0.14438 3.36164 2.78981 3.26155 43 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 44 3.06985 2.58320 3.11872 0.18173 44 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00096 4.00096 1.46634 0.26236 1.09861 0.40547 45 0.14438 3.36164 2.78981 3.26155 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98250 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:16:43 2012 NSEQ 2 EFFN 2.000000 CKSUM 1938843588 STATS LOCAL MSV -7.3387 0.72901 STATS LOCAL VITERBI -8.2174 0.72901 STATS LOCAL FORWARD -3.3436 0.72901 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.32189 1.27998 1.61487 1.36098 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.92825 2.28391 0.95698 2.13014 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:13:22 2012 NSEQ 13 EFFN 3.399170 CKSUM 3201700513 STATS LOCAL MSV -7.2471 0.71931 STATS LOCAL VITERBI -7.5423 0.71931 STATS LOCAL FORWARD -4.0161 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54760 1.54661 1.31368 1.18599 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 0.00000 * 1 3.46095 0.12694 3.50922 2.84922 1 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 2 0.13874 3.40444 2.81761 3.30841 2 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 3 3.11308 2.61070 3.16030 0.17478 3 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 4 3.11308 2.61070 3.16030 0.17478 4 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 5 2.96432 3.61223 0.11452 3.51946 5 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 6 2.96432 3.61223 0.11452 3.51946 6 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 7 3.46095 0.12694 3.50922 2.84922 7 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 8 3.46095 0.12694 3.50922 2.84922 8 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 9 3.11308 2.61070 3.16030 0.17478 9 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 10 3.46095 0.12694 3.50922 2.84922 10 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 11 0.13874 3.40444 2.81761 3.30841 11 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 12 2.96432 3.61223 0.11452 3.51946 12 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 13 3.11308 2.61070 3.16030 0.17478 13 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 14 3.11308 2.61070 3.16030 0.17478 14 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 15 2.96432 3.61223 0.11452 3.51946 15 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 16 2.96432 3.61223 0.11452 3.51946 16 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 17 2.96432 3.61223 0.11452 3.51946 17 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 18 3.11308 2.61070 3.16030 0.17478 18 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 19 2.96432 3.61223 0.11452 3.51946 19 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 20 2.96432 3.61223 0.11452 3.51946 20 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 21 2.96432 3.61223 0.11452 3.51946 21 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 22 0.13874 3.40444 2.81761 3.30841 22 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 23 3.11308 2.61070 3.16030 0.17478 23 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 24 3.11308 2.61070 3.16030 0.17478 24 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 25 0.13874 3.40444 2.81761 3.30841 25 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 26 3.46095 0.12694 3.50922 2.84922 26 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 27 2.69229 0.41115 2.76121 1.57903 27 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 28 3.46095 0.12694 3.50922 2.84922 28 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 29 2.96432 3.61223 0.11452 3.51946 29 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 30 3.46095 0.12694 3.50922 2.84922 30 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 31 3.11308 2.61070 3.16030 0.17478 31 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 32 3.11308 2.61070 3.16030 0.17478 32 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 33 2.96432 3.61223 0.11452 3.51946 33 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 34 0.13874 3.40444 2.81761 3.30841 34 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 35 3.11308 2.61070 3.16030 0.17478 35 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 36 3.11308 2.61070 3.16030 0.17478 36 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 37 3.11308 2.61070 3.16030 0.17478 37 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 38 0.13874 3.40444 2.81761 3.30841 38 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 39 0.13874 3.40444 2.81761 3.30841 39 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 40 2.96432 3.61223 0.11452 3.51946 40 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 41 3.46095 0.12694 3.50922 2.84922 41 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 42 0.13874 3.40444 2.81761 3.30841 42 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 43 3.11308 2.61070 3.16030 0.17478 43 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 44 0.13874 3.40444 2.81761 3.30841 44 - - 1.38629 1.38629 1.38629 1.38629 0.03637 4.02520 4.02520 1.46634 0.26236 1.09861 0.40547 45 3.11308 2.61070 3.16030 0.17478 45 - - 1.38629 1.38629 1.38629 1.38629 0.01835 4.00718 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:16:15 2012 NSEQ 2 EFFN 2.000000 CKSUM 2602341775 STATS LOCAL MSV -7.2230 0.72782 STATS LOCAL VITERBI -8.3128 0.72782 STATS LOCAL FORWARD -3.4222 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29269 1.29446 1.43313 1.54712 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:16:09 2012 NSEQ 9 EFFN 3.247559 CKSUM 4074190765 STATS LOCAL MSV -7.9969 0.71931 STATS LOCAL VITERBI -7.5751 0.71931 STATS LOCAL FORWARD -4.0466 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22011 1.26395 1.61119 1.50230 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 0.00000 * 1 0.14515 3.35591 2.78608 3.25528 1 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 2 3.06409 2.57953 3.11318 0.18268 2 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 3 3.06409 2.57953 3.11318 0.18268 3 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 4 0.14515 3.35591 2.78608 3.25528 4 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 5 3.40502 0.13361 3.45566 2.80851 5 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 6 0.14515 3.35591 2.78608 3.25528 6 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 7 3.40502 0.13361 3.45566 2.80851 7 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 8 3.40502 0.13361 3.45566 2.80851 8 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 9 3.06409 2.57953 3.11318 0.18268 9 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 10 3.40502 0.13361 3.45566 2.80851 10 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 11 0.14515 3.35591 2.78608 3.25528 11 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 12 0.14515 3.35591 2.78608 3.25528 12 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 13 3.40502 0.13361 3.45566 2.80851 13 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 14 3.06409 2.57953 3.11318 0.18268 14 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 15 3.40502 0.13361 3.45566 2.80851 15 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 16 2.93046 3.56298 0.11991 3.46510 16 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 17 2.93046 3.56298 0.11991 3.46510 17 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 18 2.93046 3.56298 0.11991 3.46510 18 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 19 3.06409 2.57953 3.11318 0.18268 19 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 20 0.14515 3.35591 2.78608 3.25528 20 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 21 2.93046 3.56298 0.11991 3.46510 21 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 22 2.93046 3.56298 0.11991 3.46510 22 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 23 0.14515 3.35591 2.78608 3.25528 23 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 24 3.40502 0.13361 3.45566 2.80851 24 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 25 3.06409 2.57953 3.11318 0.18268 25 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 26 0.14515 3.35591 2.78608 3.25528 26 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 27 3.40502 0.13361 3.45566 2.80851 27 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 28 2.93046 3.56298 0.11991 3.46510 28 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 29 3.40502 0.13361 3.45566 2.80851 29 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 30 3.40502 0.13361 3.45566 2.80851 30 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 31 3.40502 0.13361 3.45566 2.80851 31 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 32 3.06409 2.57953 3.11318 0.18268 32 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 33 2.93046 3.56298 0.11991 3.46510 33 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 34 0.14515 3.35591 2.78608 3.25528 34 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 35 0.14515 3.35591 2.78608 3.25528 35 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 36 3.40502 0.13361 3.45566 2.80851 36 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 37 3.06409 2.57953 3.11318 0.18268 37 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 38 3.06409 2.57953 3.11318 0.18268 38 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 39 0.14515 3.35591 2.78608 3.25528 39 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 40 0.14515 3.35591 2.78608 3.25528 40 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 41 2.93046 3.56298 0.11991 3.46510 41 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 42 3.40502 0.13361 3.45566 2.80851 42 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 43 0.14515 3.35591 2.78608 3.25528 43 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 44 3.06409 2.57953 3.11318 0.18268 44 - - 1.38629 1.38629 1.38629 1.38629 0.03740 3.99775 3.99775 1.46634 0.26236 1.09861 0.40547 45 0.14515 3.35591 2.78608 3.25528 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97923 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:15:37 2012 NSEQ 9 EFFN 3.221191 CKSUM 479055599 STATS LOCAL MSV -7.9488 0.71932 STATS LOCAL VITERBI -7.6115 0.71932 STATS LOCAL FORWARD -3.8539 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34268 1.26560 1.45107 1.50299 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 0.00000 * 1 3.05537 2.57398 3.10479 0.18413 1 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 2 2.92433 3.55411 0.12091 3.45532 2 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 3 2.92433 3.55411 0.12091 3.45532 3 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 4 3.05537 2.57398 3.10479 0.18413 4 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 5 2.92433 3.55411 0.12091 3.45532 5 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 6 0.14634 3.34721 2.78040 3.24577 6 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 7 3.39499 0.13485 3.44604 2.80116 7 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 8 3.39499 0.13485 3.44604 2.80116 8 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 9 3.05537 2.57398 3.10479 0.18413 9 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 10 3.39499 0.13485 3.44604 2.80116 10 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 11 0.14634 3.34721 2.78040 3.24577 11 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 12 2.92433 3.55411 0.12091 3.45532 12 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 13 3.05537 2.57398 3.10479 0.18413 13 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 14 3.39499 0.13485 3.44604 2.80116 14 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 15 3.39499 0.13485 3.44604 2.80116 15 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 16 3.05537 2.57398 3.10479 0.18413 16 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 17 2.92433 3.55411 0.12091 3.45532 17 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 18 3.39499 0.13485 3.44604 2.80116 18 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 19 0.14634 3.34721 2.78040 3.24577 19 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 20 0.14634 3.34721 2.78040 3.24577 20 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 21 2.92433 3.55411 0.12091 3.45532 21 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 22 0.14634 3.34721 2.78040 3.24577 22 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 23 3.39499 0.13485 3.44604 2.80116 23 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 24 2.92433 3.55411 0.12091 3.45532 24 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 25 0.14634 3.34721 2.78040 3.24577 25 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 26 3.39499 0.13485 3.44604 2.80116 26 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 27 3.39499 0.13485 3.44604 2.80116 27 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 28 3.39499 0.13485 3.44604 2.80116 28 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 29 2.92433 3.55411 0.12091 3.45532 29 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 30 3.39499 0.13485 3.44604 2.80116 30 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 31 3.05537 2.57398 3.10479 0.18413 31 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 32 0.14634 3.34721 2.78040 3.24577 32 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 33 2.92433 3.55411 0.12091 3.45532 33 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 34 0.14634 3.34721 2.78040 3.24577 34 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 35 3.39499 0.13485 3.44604 2.80116 35 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 36 3.05537 2.57398 3.10479 0.18413 36 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 37 3.05537 2.57398 3.10479 0.18413 37 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 38 0.14634 3.34721 2.78040 3.24577 38 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 39 0.14634 3.34721 2.78040 3.24577 39 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 40 2.92433 3.55411 0.12091 3.45532 40 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 41 3.39499 0.13485 3.44604 2.80116 41 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 42 0.14634 3.34721 2.78040 3.24577 42 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 43 3.05537 2.57398 3.10479 0.18413 43 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 44 0.14634 3.34721 2.78040 3.24577 44 - - 1.38629 1.38629 1.38629 1.38629 0.03759 3.99290 3.99290 1.46634 0.26236 1.09861 0.40547 45 3.05537 2.57398 3.10479 0.18413 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97428 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:15:29 2012 NSEQ 31 EFFN 3.371704 CKSUM 635857156 STATS LOCAL MSV -7.4338 0.71933 STATS LOCAL VITERBI -7.4746 0.71933 STATS LOCAL FORWARD -4.1935 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.47276 1.43783 1.38054 1.26648 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 0.00000 * 1 3.45104 0.12809 3.49973 2.84203 1 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 2 0.13986 3.39583 2.81203 3.29897 2 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 3 3.10435 2.60515 3.15190 0.17616 3 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 4 3.10435 2.60515 3.15190 0.17616 4 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 5 2.95836 3.60353 0.11545 3.50984 5 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 6 2.95836 3.60353 0.11545 3.50984 6 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 7 3.45104 0.12809 3.49973 2.84203 7 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 8 3.45104 0.12809 3.49973 2.84203 8 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 9 3.10435 2.60515 3.15190 0.17616 9 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 10 3.45104 0.12809 3.49973 2.84203 10 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 11 0.13986 3.39583 2.81203 3.29897 11 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 12 2.95836 3.60353 0.11545 3.50984 12 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 13 3.10435 2.60515 3.15190 0.17616 13 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 14 3.45104 0.12809 3.49973 2.84203 14 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 15 2.95836 3.60353 0.11545 3.50984 15 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 16 2.95836 3.60353 0.11545 3.50984 16 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 17 0.13986 3.39583 2.81203 3.29897 17 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 18 2.55845 1.45978 2.62539 0.48147 18 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 19 2.95836 3.60353 0.11545 3.50984 19 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 20 2.95836 3.60353 0.11545 3.50984 20 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 21 2.95836 3.60353 0.11545 3.50984 21 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 22 0.13986 3.39583 2.81203 3.29897 22 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 23 3.10435 2.60515 3.15190 0.17616 23 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 24 3.10435 2.60515 3.15190 0.17616 24 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 25 0.13986 3.39583 2.81203 3.29897 25 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 26 3.45104 0.12809 3.49973 2.84203 26 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 27 3.45104 0.12809 3.49973 2.84203 27 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 28 3.45104 0.12809 3.49973 2.84203 28 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 29 2.95836 3.60353 0.11545 3.50984 29 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 30 3.45104 0.12809 3.49973 2.84203 30 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 31 3.10435 2.60515 3.15190 0.17616 31 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 32 3.10435 2.60515 3.15190 0.17616 32 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 33 2.95836 3.60353 0.11545 3.50984 33 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 34 0.13986 3.39583 2.81203 3.29897 34 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 35 3.10435 2.60515 3.15190 0.17616 35 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 36 3.10435 2.60515 3.15190 0.17616 36 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 37 3.10435 2.60515 3.15190 0.17616 37 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 38 0.13986 3.39583 2.81203 3.29897 38 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 39 0.13986 3.39583 2.81203 3.29897 39 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 40 2.95836 3.60353 0.11545 3.50984 40 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 41 3.45104 0.12809 3.49973 2.84203 41 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 42 0.13986 3.39583 2.81203 3.29897 42 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 43 3.10435 2.60515 3.15190 0.17616 43 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 44 0.13986 3.39583 2.81203 3.29897 44 - - 1.38629 1.38629 1.38629 1.38629 0.03656 4.02029 4.02029 1.46634 0.26236 1.09861 0.40547 45 3.10435 2.60515 3.15190 0.17616 45 - - 1.38629 1.38629 1.38629 1.38629 0.01844 4.00218 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Tu_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Sat Feb 11 22:09:31 2012 NSEQ 34 EFFN 3.299561 CKSUM 31388989 STATS LOCAL MSV -8.1379 0.71933 STATS LOCAL VITERBI -7.6142 0.71933 STATS LOCAL FORWARD -4.0326 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27555 1.38242 1.44924 1.44815 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 0.00000 * 1 2.69990 1.77986 2.76204 0.35530 1 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 2 3.42454 0.13123 3.47436 2.82276 2 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 3 0.14288 3.37283 2.79710 3.27379 3 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 4 3.08112 2.59037 3.12956 0.17989 4 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 5 2.94234 3.58021 0.11799 3.48410 5 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 6 0.14288 3.37283 2.79710 3.27379 6 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 7 3.42454 0.13123 3.47436 2.82276 7 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 8 3.42454 0.13123 3.47436 2.82276 8 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 9 3.08112 2.59037 3.12956 0.17989 9 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 10 3.42454 0.13123 3.47436 2.82276 10 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 11 0.14288 3.37283 2.79710 3.27379 11 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 12 3.08112 2.59037 3.12956 0.17989 12 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 13 3.08112 2.59037 3.12956 0.17989 13 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 14 2.94234 3.58021 0.11799 3.48410 14 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 15 2.94234 3.58021 0.11799 3.48410 15 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 16 2.94234 3.58021 0.11799 3.48410 16 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 17 2.94234 3.58021 0.11799 3.48410 17 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 18 3.08112 2.59037 3.12956 0.17989 18 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 19 0.14288 3.37283 2.79710 3.27379 19 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 20 2.94234 3.58021 0.11799 3.48410 20 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 21 2.94234 3.58021 0.11799 3.48410 21 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 22 0.14288 3.37283 2.79710 3.27379 22 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 23 3.42454 0.13123 3.47436 2.82276 23 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 24 0.14288 3.37283 2.79710 3.27379 24 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 25 0.14288 3.37283 2.79710 3.27379 25 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 26 3.42454 0.13123 3.47436 2.82276 26 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 27 3.42454 0.13123 3.47436 2.82276 27 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 28 3.42454 0.13123 3.47436 2.82276 28 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 29 2.94234 3.58021 0.11799 3.48410 29 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 30 3.42454 0.13123 3.47436 2.82276 30 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 31 3.08112 2.59037 3.12956 0.17989 31 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 32 0.14288 3.37283 2.79710 3.27379 32 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 33 2.94234 3.58021 0.11799 3.48410 33 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 34 0.14288 3.37283 2.79710 3.27379 34 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 35 3.42454 0.13123 3.47436 2.82276 35 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 36 3.08112 2.59037 3.12956 0.17989 36 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 37 3.08112 2.59037 3.12956 0.17989 37 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 38 0.14288 3.37283 2.79710 3.27379 38 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 39 0.14288 3.37283 2.79710 3.27379 39 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 40 2.94234 3.58021 0.11799 3.48410 40 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 41 3.42454 0.13123 3.47436 2.82276 41 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 42 0.14288 3.37283 2.79710 3.27379 42 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 43 3.08112 2.59037 3.12956 0.17989 43 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 44 0.14288 3.37283 2.79710 3.27379 44 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00725 4.00725 1.46634 0.26236 1.09861 0.40547 45 3.08112 2.59037 3.12956 0.17989 45 - - 1.38629 1.38629 1.38629 1.38629 0.01869 3.98890 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:49 2012 NSEQ 61 EFFN 3.391785 CKSUM 2249119243 STATS LOCAL MSV -7.5017 0.71933 STATS LOCAL VITERBI -7.5245 0.71933 STATS LOCAL FORWARD -4.1611 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21410 1.45577 1.51403 1.38717 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 0.00000 * 1 2.96272 3.60990 0.11477 3.51688 1 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 2 3.03732 2.42941 3.08721 0.20050 2 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 3 3.11074 2.60921 3.15805 0.17515 3 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 4 3.11074 2.60921 3.15805 0.17515 4 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 5 2.96272 3.60990 0.11477 3.51688 5 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 6 0.13904 3.40213 2.81611 3.30588 6 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 7 3.45829 0.12724 3.50668 2.84730 7 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 8 3.45829 0.12724 3.50668 2.84730 8 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 9 3.11074 2.60921 3.15805 0.17515 9 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 10 3.45829 0.12724 3.50668 2.84730 10 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 11 0.13904 3.40213 2.81611 3.30588 11 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 12 0.13904 3.40213 2.81611 3.30588 12 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 13 0.13904 3.40213 2.81611 3.30588 13 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 14 3.11074 2.60921 3.15805 0.17515 14 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 15 3.45829 0.12724 3.50668 2.84730 15 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 16 0.13904 3.40213 2.81611 3.30588 16 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 17 2.96272 3.60990 0.11477 3.51688 17 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 18 2.96272 3.60990 0.11477 3.51688 18 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 19 3.11074 2.60921 3.15805 0.17515 19 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 20 0.13904 3.40213 2.81611 3.30588 20 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 21 2.96272 3.60990 0.11477 3.51688 21 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 22 2.96272 3.60990 0.11477 3.51688 22 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 23 0.17144 3.28209 2.54592 3.17964 23 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 24 2.08701 2.25160 2.07788 0.43770 24 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 25 3.11074 2.60921 3.15805 0.17515 25 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 26 0.13904 3.40213 2.81611 3.30588 26 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 27 3.45829 0.12724 3.50668 2.84730 27 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 28 3.45829 0.12724 3.50668 2.84730 28 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 29 3.45829 0.12724 3.50668 2.84730 29 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 30 2.96272 3.60990 0.11477 3.51688 30 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 31 3.45829 0.12724 3.50668 2.84730 31 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 32 3.11074 2.60921 3.15805 0.17515 32 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 33 2.96272 3.60990 0.11477 3.51688 33 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 34 0.13904 3.40213 2.81611 3.30588 34 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 35 0.13904 3.40213 2.81611 3.30588 35 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 36 3.45829 0.12724 3.50668 2.84730 36 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 37 3.11074 2.60921 3.15805 0.17515 37 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 38 3.11074 2.60921 3.15805 0.17515 38 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 39 0.13904 3.40213 2.81611 3.30588 39 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 40 0.13904 3.40213 2.81611 3.30588 40 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 41 2.96272 3.60990 0.11477 3.51688 41 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 42 3.45829 0.12724 3.50668 2.84730 42 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 43 0.13904 3.40213 2.81611 3.30588 43 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 44 3.11074 2.60921 3.15805 0.17515 44 - - 1.38629 1.38629 1.38629 1.38629 0.03642 4.02388 4.02388 1.46634 0.26236 1.09861 0.40547 45 0.13904 3.40213 2.81611 3.30588 45 - - 1.38629 1.38629 1.38629 1.38629 0.01838 4.00584 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_eighteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:41:40 2012 NSEQ 4 EFFN 3.222656 CKSUM 1886630756 STATS LOCAL MSV -7.8488 0.71933 STATS LOCAL VITERBI -7.6559 0.71933 STATS LOCAL FORWARD -4.1786 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27742 1.32751 1.45122 1.50588 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 0.00000 * 1 0.14627 3.34770 2.78072 3.24630 1 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 2 3.05586 2.57429 3.10526 0.18405 2 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 3 3.39555 0.13478 3.44658 2.80157 3 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 4 3.05586 2.57429 3.10526 0.18405 4 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 5 2.92468 3.55461 0.12085 3.45586 5 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 6 0.14627 3.34770 2.78072 3.24630 6 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 7 3.39555 0.13478 3.44658 2.80157 7 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 8 3.39555 0.13478 3.44658 2.80157 8 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 9 3.05586 2.57429 3.10526 0.18405 9 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 10 3.39555 0.13478 3.44658 2.80157 10 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 11 2.92468 3.55461 0.12085 3.45586 11 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 12 0.14627 3.34770 2.78072 3.24630 12 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 13 0.14627 3.34770 2.78072 3.24630 13 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 14 3.05586 2.57429 3.10526 0.18405 14 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 15 3.39555 0.13478 3.44658 2.80157 15 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 16 0.14627 3.34770 2.78072 3.24630 16 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 17 2.92468 3.55461 0.12085 3.45586 17 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 18 2.92468 3.55461 0.12085 3.45586 18 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 19 3.05586 2.57429 3.10526 0.18405 19 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 20 2.92468 3.55461 0.12085 3.45586 20 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 21 2.92468 3.55461 0.12085 3.45586 21 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 22 2.92468 3.55461 0.12085 3.45586 22 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 23 0.14627 3.34770 2.78072 3.24630 23 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 24 3.39555 0.13478 3.44658 2.80157 24 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 25 3.05586 2.57429 3.10526 0.18405 25 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 26 0.14627 3.34770 2.78072 3.24630 26 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 27 3.39555 0.13478 3.44658 2.80157 27 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 28 3.39555 0.13478 3.44658 2.80157 28 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 29 3.39555 0.13478 3.44658 2.80157 29 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 30 2.92468 3.55461 0.12085 3.45586 30 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 31 3.39555 0.13478 3.44658 2.80157 31 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 32 3.05586 2.57429 3.10526 0.18405 32 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 33 2.92468 3.55461 0.12085 3.45586 33 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 34 0.14627 3.34770 2.78072 3.24630 34 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 35 0.14627 3.34770 2.78072 3.24630 35 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 36 3.39555 0.13478 3.44658 2.80157 36 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 37 3.05586 2.57429 3.10526 0.18405 37 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 38 3.05586 2.57429 3.10526 0.18405 38 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 39 0.14627 3.34770 2.78072 3.24630 39 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 40 0.14627 3.34770 2.78072 3.24630 40 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 41 2.92468 3.55461 0.12085 3.45586 41 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 42 3.39555 0.13478 3.44658 2.80157 42 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 43 0.14627 3.34770 2.78072 3.24630 43 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 44 3.05586 2.57429 3.10526 0.18405 44 - - 1.38629 1.38629 1.38629 1.38629 0.03758 3.99317 3.99317 1.46634 0.26236 1.09861 0.40547 45 0.14627 3.34770 2.78072 3.24630 45 - - 1.38629 1.38629 1.38629 1.38629 0.01897 3.97456 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_elevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:41 2012 NSEQ 4 EFFN 3.527344 CKSUM 3771865796 STATS LOCAL MSV -7.6839 0.71933 STATS LOCAL VITERBI -7.5131 0.71933 STATS LOCAL FORWARD -4.3120 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11132 1.38574 1.62586 1.49613 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 0.00000 * 1 0.13381 3.44360 2.84291 3.35134 1 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 2 3.15301 2.63604 3.19868 0.16864 2 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 3 3.15301 2.63604 3.19868 0.16864 3 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 4 3.15301 2.63604 3.19868 0.16864 4 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 5 2.99121 3.65163 0.11040 3.56302 5 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 6 0.13381 3.44360 2.84291 3.35134 6 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 7 3.50594 0.12185 3.55225 2.88172 7 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 8 3.50594 0.12185 3.55225 2.88172 8 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 9 3.15301 2.63604 3.19868 0.16864 9 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 10 3.50594 0.12185 3.55225 2.88172 10 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 11 0.13381 3.44360 2.84291 3.35134 11 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 12 0.13381 3.44360 2.84291 3.35134 12 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 13 0.13381 3.44360 2.84291 3.35134 13 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 14 3.15301 2.63604 3.19868 0.16864 14 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 15 3.50594 0.12185 3.55225 2.88172 15 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 16 0.13381 3.44360 2.84291 3.35134 16 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 17 2.99121 3.65163 0.11040 3.56302 17 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 18 2.99121 3.65163 0.11040 3.56302 18 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 19 3.15301 2.63604 3.19868 0.16864 19 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 20 0.13381 3.44360 2.84291 3.35134 20 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 21 0.85336 2.54892 0.90251 2.40461 21 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 22 2.99121 3.65163 0.11040 3.56302 22 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 23 0.85336 2.54892 0.90251 2.40461 23 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 24 0.13381 3.44360 2.84291 3.35134 24 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 25 3.50594 0.12185 3.55225 2.88172 25 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 26 0.13381 3.44360 2.84291 3.35134 26 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 27 3.50594 0.12185 3.55225 2.88172 27 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 28 3.50594 0.12185 3.55225 2.88172 28 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 29 3.50594 0.12185 3.55225 2.88172 29 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 30 2.99121 3.65163 0.11040 3.56302 30 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 31 3.50594 0.12185 3.55225 2.88172 31 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 32 3.15301 2.63604 3.19868 0.16864 32 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 33 2.99121 3.65163 0.11040 3.56302 33 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 34 0.13381 3.44360 2.84291 3.35134 34 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 35 0.13381 3.44360 2.84291 3.35134 35 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 36 3.50594 0.12185 3.55225 2.88172 36 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 37 3.15301 2.63604 3.19868 0.16864 37 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 38 3.15301 2.63604 3.19868 0.16864 38 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 39 0.13381 3.44360 2.84291 3.35134 39 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 40 0.13381 3.44360 2.84291 3.35134 40 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 41 2.99121 3.65163 0.11040 3.56302 41 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 42 3.50594 0.12185 3.55225 2.88172 42 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 43 0.13381 3.44360 2.84291 3.35134 43 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 44 3.15301 2.63604 3.19868 0.16864 44 - - 1.38629 1.38629 1.38629 1.38629 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547 45 0.13381 3.44360 2.84291 3.35134 45 - - 1.38629 1.38629 1.38629 1.38629 0.01793 4.03022 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_elevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:48 2012 NSEQ 2 EFFN 2.000000 CKSUM 4034610785 STATS LOCAL MSV -7.5666 0.72804 STATS LOCAL VITERBI -8.1813 0.72804 STATS LOCAL FORWARD -3.5779 0.72804 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14288 1.46639 1.49214 1.48965 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_elevenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:55 2012 NSEQ 4 EFFN 3.441406 CKSUM 3714056672 STATS LOCAL MSV -7.6157 0.71931 STATS LOCAL VITERBI -7.5372 0.71931 STATS LOCAL FORWARD -4.2543 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13779 1.45510 1.66122 1.36184 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 0.00000 * 1 3.12639 2.61915 3.17309 0.17271 1 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 2 3.12639 2.61915 3.17309 0.17271 2 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 3 3.12639 2.61915 3.17309 0.17271 3 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 4 3.12639 2.61915 3.17309 0.17271 4 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 5 2.97335 3.62543 0.11312 3.53405 5 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 6 0.13707 3.41753 2.82608 3.32275 6 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 7 3.47600 0.12521 3.52362 2.86012 7 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 8 3.47600 0.12521 3.52362 2.86012 8 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 9 3.12639 2.61915 3.17309 0.17271 9 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 10 3.47600 0.12521 3.52362 2.86012 10 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 11 0.13707 3.41753 2.82608 3.32275 11 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 12 0.13707 3.41753 2.82608 3.32275 12 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 13 0.13707 3.41753 2.82608 3.32275 13 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 14 3.12639 2.61915 3.17309 0.17271 14 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 15 3.47600 0.12521 3.52362 2.86012 15 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 16 0.13707 3.41753 2.82608 3.32275 16 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 17 2.97335 3.62543 0.11312 3.53405 17 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 18 2.97335 3.62543 0.11312 3.53405 18 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 19 3.12639 2.61915 3.17309 0.17271 19 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 20 0.13707 3.41753 2.82608 3.32275 20 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 21 0.13707 3.41753 2.82608 3.32275 21 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 22 2.97335 3.62543 0.11312 3.53405 22 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 23 0.85674 2.53484 0.90495 2.39011 23 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 24 0.13707 3.41753 2.82608 3.32275 24 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 25 3.12639 2.61915 3.17309 0.17271 25 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 26 0.13707 3.41753 2.82608 3.32275 26 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 27 3.47600 0.12521 3.52362 2.86012 27 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 28 3.47600 0.12521 3.52362 2.86012 28 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 29 3.47600 0.12521 3.52362 2.86012 29 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 30 2.97335 3.62543 0.11312 3.53405 30 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 31 3.47600 0.12521 3.52362 2.86012 31 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 32 3.12639 2.61915 3.17309 0.17271 32 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 33 2.97335 3.62543 0.11312 3.53405 33 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 34 0.13707 3.41753 2.82608 3.32275 34 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 35 0.13707 3.41753 2.82608 3.32275 35 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 36 3.47600 0.12521 3.52362 2.86012 36 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 37 3.12639 2.61915 3.17309 0.17271 37 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 38 3.12639 2.61915 3.17309 0.17271 38 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 39 0.13707 3.41753 2.82608 3.32275 39 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 40 0.13707 3.41753 2.82608 3.32275 40 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 41 2.97335 3.62543 0.11312 3.53405 41 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 42 3.47600 0.12521 3.52362 2.86012 42 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 43 0.13707 3.41753 2.82608 3.32275 43 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 44 3.12639 2.61915 3.17309 0.17271 44 - - 1.38629 1.38629 1.38629 1.38629 0.03610 4.03272 4.03272 1.46634 0.26236 1.09861 0.40547 45 0.13707 3.41753 2.82608 3.32275 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01483 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fifteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:41:01 2012 NSEQ 25 EFFN 3.231812 CKSUM 1558218022 STATS LOCAL MSV -8.0339 0.71931 STATS LOCAL VITERBI -7.7977 0.71931 STATS LOCAL FORWARD -4.3280 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33845 1.46503 1.31095 1.43921 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 0.00000 * 1 2.92681 3.55770 0.12050 3.45927 1 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 2 3.05889 2.57622 3.10818 0.18354 2 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 3 3.05889 2.57622 3.10818 0.18354 3 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 4 3.05889 2.57622 3.10818 0.18354 4 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 5 2.92681 3.55770 0.12050 3.45927 5 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 6 0.14586 3.35072 2.78270 3.24961 6 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 7 3.39904 0.13435 3.44993 2.80413 7 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 8 3.39904 0.13435 3.44993 2.80413 8 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 9 3.05889 2.57622 3.10818 0.18354 9 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 10 3.39904 0.13435 3.44993 2.80413 10 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 11 2.92681 3.55770 0.12050 3.45927 11 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 12 2.92681 3.55770 0.12050 3.45927 12 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 13 0.14586 3.35072 2.78270 3.24961 13 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 14 3.05889 2.57622 3.10818 0.18354 14 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 15 3.39904 0.13435 3.44993 2.80413 15 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 16 0.14586 3.35072 2.78270 3.24961 16 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 17 2.92681 3.55770 0.12050 3.45927 17 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 18 2.92681 3.55770 0.12050 3.45927 18 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 19 3.05889 2.57622 3.10818 0.18354 19 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 20 0.14586 3.35072 2.78270 3.24961 20 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 21 2.92681 3.55770 0.12050 3.45927 21 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 22 2.92681 3.55770 0.12050 3.45927 22 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 23 0.14586 3.35072 2.78270 3.24961 23 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 24 2.92681 3.55770 0.12050 3.45927 24 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 25 3.05889 2.57622 3.10818 0.18354 25 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 26 0.14586 3.35072 2.78270 3.24961 26 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 27 3.39904 0.13435 3.44993 2.80413 27 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 28 3.39904 0.13435 3.44993 2.80413 28 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 29 3.39904 0.13435 3.44993 2.80413 29 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 30 2.92681 3.55770 0.12050 3.45927 30 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 31 3.39904 0.13435 3.44993 2.80413 31 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 32 3.05889 2.57622 3.10818 0.18354 32 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 33 2.92681 3.55770 0.12050 3.45927 33 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 34 0.14586 3.35072 2.78270 3.24961 34 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 35 0.14586 3.35072 2.78270 3.24961 35 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 36 3.39904 0.13435 3.44993 2.80413 36 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 37 3.05889 2.57622 3.10818 0.18354 37 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 38 3.05889 2.57622 3.10818 0.18354 38 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 39 0.14586 3.35072 2.78270 3.24961 39 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 40 0.14586 3.35072 2.78270 3.24961 40 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 41 2.92681 3.55770 0.12050 3.45927 41 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 42 3.39904 0.13435 3.44993 2.80413 42 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 43 0.14586 3.35072 2.78270 3.24961 43 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 44 3.05889 2.57622 3.10818 0.18354 44 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99486 3.99486 1.46634 0.26236 1.09861 0.40547 45 0.14586 3.35072 2.78270 3.24961 45 - - 1.38629 1.38629 1.38629 1.38629 0.01893 3.97628 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fifty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:54:36 2012 NSEQ 2 EFFN 2.000000 CKSUM 2369742896 STATS LOCAL MSV -7.4718 0.72784 STATS LOCAL VITERBI -8.1085 0.72784 STATS LOCAL FORWARD -3.5683 0.72784 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19105 1.40517 1.43038 1.55327 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fiftyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:54:44 2012 NSEQ 6 EFFN 3.231445 CKSUM 431402623 STATS LOCAL MSV -8.0392 0.71932 STATS LOCAL VITERBI -7.8292 0.71932 STATS LOCAL FORWARD -4.1346 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21877 1.39336 1.44798 1.50904 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 0.00000 * 1 3.39890 0.13436 3.44980 2.80403 1 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 2 0.14587 3.35060 2.78262 3.24948 2 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 3 3.05877 2.57614 3.10806 0.18356 3 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 4 2.92673 3.55757 0.12052 3.45913 4 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 5 2.92673 3.55757 0.12052 3.45913 5 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 6 0.14587 3.35060 2.78262 3.24948 6 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 7 3.05877 2.57614 3.10806 0.18356 7 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 8 3.39890 0.13436 3.44980 2.80403 8 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 9 3.05877 2.57614 3.10806 0.18356 9 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 10 2.92673 3.55757 0.12052 3.45913 10 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 11 0.14587 3.35060 2.78262 3.24948 11 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 12 0.14587 3.35060 2.78262 3.24948 12 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 13 3.39890 0.13436 3.44980 2.80403 13 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 14 3.05877 2.57614 3.10806 0.18356 14 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 15 3.05877 2.57614 3.10806 0.18356 15 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 16 0.14587 3.35060 2.78262 3.24948 16 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 17 2.92673 3.55757 0.12052 3.45913 17 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 18 0.14587 3.35060 2.78262 3.24948 18 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 19 3.39890 0.13436 3.44980 2.80403 19 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 20 2.92673 3.55757 0.12052 3.45913 20 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 21 2.92673 3.55757 0.12052 3.45913 21 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 22 2.92673 3.55757 0.12052 3.45913 22 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 23 0.14587 3.35060 2.78262 3.24948 23 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 24 3.39890 0.13436 3.44980 2.80403 24 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 25 3.05877 2.57614 3.10806 0.18356 25 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 26 0.14587 3.35060 2.78262 3.24948 26 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 27 3.39890 0.13436 3.44980 2.80403 27 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 28 3.39890 0.13436 3.44980 2.80403 28 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 29 3.39890 0.13436 3.44980 2.80403 29 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 30 2.92673 3.55757 0.12052 3.45913 30 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 31 3.39890 0.13436 3.44980 2.80403 31 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 32 3.05877 2.57614 3.10806 0.18356 32 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 33 2.92673 3.55757 0.12052 3.45913 33 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 34 0.14587 3.35060 2.78262 3.24948 34 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 35 0.14587 3.35060 2.78262 3.24948 35 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 36 3.39890 0.13436 3.44980 2.80403 36 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 37 3.05877 2.57614 3.10806 0.18356 37 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 38 3.05877 2.57614 3.10806 0.18356 38 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 39 0.14587 3.35060 2.78262 3.24948 39 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 40 0.14587 3.35060 2.78262 3.24948 40 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 41 2.92673 3.55757 0.12052 3.45913 41 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 42 3.39890 0.13436 3.44980 2.80403 42 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 43 0.14587 3.35060 2.78262 3.24948 43 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 44 3.05877 2.57614 3.10806 0.18356 44 - - 1.38629 1.38629 1.38629 1.38629 0.03752 3.99479 3.99479 1.46634 0.26236 1.09861 0.40547 45 0.14587 3.35060 2.78262 3.24948 45 - - 1.38629 1.38629 1.38629 1.38629 0.01893 3.97621 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fiftythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:55:10 2012 NSEQ 2 EFFN 2.000000 CKSUM 2408033659 STATS LOCAL MSV -7.4844 0.72829 STATS LOCAL VITERBI -8.3468 0.72829 STATS LOCAL FORWARD -3.3326 0.72829 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28799 1.51827 1.43079 1.32440 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.53331 3.02441 0.20344 2.88069 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.81865 0.23582 2.88868 2.35662 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.57915 2.25909 2.64442 0.28946 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.53331 3.02441 0.20344 2.88069 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.81865 0.23582 2.88868 2.35662 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 0.23862 2.84929 2.43386 2.70756 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.53331 3.02441 0.20344 2.88069 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fiftytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:55:00 2012 NSEQ 4 EFFN 3.214844 CKSUM 1972606151 STATS LOCAL MSV -8.0003 0.71933 STATS LOCAL VITERBI -7.7534 0.71933 STATS LOCAL FORWARD -4.3837 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40386 1.46567 1.24879 1.44148 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 2.92285 3.55196 0.12115 3.45295 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 2.92285 3.55196 0.12115 3.45295 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 3.05326 2.57263 3.10276 0.18448 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 3.05326 2.57263 3.10276 0.18448 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 2.92285 3.55196 0.12115 3.45295 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 0.14663 3.34511 2.77903 3.24347 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 3.39256 0.13515 3.44371 2.79938 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 3.39256 0.13515 3.44371 2.79938 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.05326 2.57263 3.10276 0.18448 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 3.39256 0.13515 3.44371 2.79938 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 2.92285 3.55196 0.12115 3.45295 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 2.92285 3.55196 0.12115 3.45295 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 0.14663 3.34511 2.77903 3.24347 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.05326 2.57263 3.10276 0.18448 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.39256 0.13515 3.44371 2.79938 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 0.14663 3.34511 2.77903 3.24347 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 2.92285 3.55196 0.12115 3.45295 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 2.92285 3.55196 0.12115 3.45295 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 3.05326 2.57263 3.10276 0.18448 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 0.14663 3.34511 2.77903 3.24347 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 2.92285 3.55196 0.12115 3.45295 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 2.92285 3.55196 0.12115 3.45295 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 0.14663 3.34511 2.77903 3.24347 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 2.92285 3.55196 0.12115 3.45295 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 3.05326 2.57263 3.10276 0.18448 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 3.05326 2.57263 3.10276 0.18448 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 0.14663 3.34511 2.77903 3.24347 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 3.39256 0.13515 3.44371 2.79938 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 2.92285 3.55196 0.12115 3.45295 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 3.39256 0.13515 3.44371 2.79938 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 3.05326 2.57263 3.10276 0.18448 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 2.92285 3.55196 0.12115 3.45295 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 0.14663 3.34511 2.77903 3.24347 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 0.14663 3.34511 2.77903 3.24347 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 3.39256 0.13515 3.44371 2.79938 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.05326 2.57263 3.10276 0.18448 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 3.05326 2.57263 3.10276 0.18448 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 0.14663 3.34511 2.77903 3.24347 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 0.14663 3.34511 2.77903 3.24347 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 2.92285 3.55196 0.12115 3.45295 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 3.39256 0.13515 3.44371 2.79938 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 0.14663 3.34511 2.77903 3.24347 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 3.05326 2.57263 3.10276 0.18448 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:17 2012 NSEQ 60 EFFN 3.262939 CKSUM 553447981 STATS LOCAL MSV -8.1012 0.71933 STATS LOCAL VITERBI -7.7705 0.71933 STATS LOCAL FORWARD -4.2454 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27681 1.46386 1.37800 1.43696 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 0.00000 * 1 3.06915 2.58276 3.11805 0.18185 1 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 2 2.93400 3.56812 0.11933 3.47076 2 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 3 3.06915 2.58276 3.11805 0.18185 3 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 4 3.06915 2.58276 3.11805 0.18185 4 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 5 2.93400 3.56812 0.11933 3.47076 5 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 6 0.14447 3.36094 2.78936 3.26078 6 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 7 3.41083 0.13290 3.46123 2.81275 7 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 8 3.41083 0.13290 3.46123 2.81275 8 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 9 3.06915 2.58276 3.11805 0.18185 9 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 10 3.41083 0.13290 3.46123 2.81275 10 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 11 2.93400 3.56812 0.11933 3.47076 11 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 12 2.64571 3.42595 0.15033 3.32150 12 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 13 0.14447 3.36094 2.78936 3.26078 13 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 14 3.06915 2.58276 3.11805 0.18185 14 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 15 3.41083 0.13290 3.46123 2.81275 15 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 16 0.14447 3.36094 2.78936 3.26078 16 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 17 2.93400 3.56812 0.11933 3.47076 17 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 18 2.93400 3.56812 0.11933 3.47076 18 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 19 3.06915 2.58276 3.11805 0.18185 19 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 20 0.14447 3.36094 2.78936 3.26078 20 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 21 2.93400 3.56812 0.11933 3.47076 21 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 22 2.93400 3.56812 0.11933 3.47076 22 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 23 0.14447 3.36094 2.78936 3.26078 23 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 24 0.16521 3.28362 2.61433 3.18026 24 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 25 3.06915 2.58276 3.11805 0.18185 25 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 26 0.14447 3.36094 2.78936 3.26078 26 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 27 3.41083 0.13290 3.46123 2.81275 27 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 28 3.41083 0.13290 3.46123 2.81275 28 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 29 3.41083 0.13290 3.46123 2.81275 29 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 30 2.93400 3.56812 0.11933 3.47076 30 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 31 3.41083 0.13290 3.46123 2.81275 31 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 32 3.06915 2.58276 3.11805 0.18185 32 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 33 2.93400 3.56812 0.11933 3.47076 33 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 34 0.14447 3.36094 2.78936 3.26078 34 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 35 0.14447 3.36094 2.78936 3.26078 35 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 36 3.41083 0.13290 3.46123 2.81275 36 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 37 3.06915 2.58276 3.11805 0.18185 37 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 38 3.06915 2.58276 3.11805 0.18185 38 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 39 0.14447 3.36094 2.78936 3.26078 39 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 40 0.14447 3.36094 2.78936 3.26078 40 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 41 2.93400 3.56812 0.11933 3.47076 41 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 42 3.41083 0.13290 3.46123 2.81275 42 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 43 0.14447 3.36094 2.78936 3.26078 43 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 44 3.06915 2.58276 3.11805 0.18185 44 - - 1.38629 1.38629 1.38629 1.38629 0.03730 4.00057 4.00057 1.46634 0.26236 1.09861 0.40547 45 0.14447 3.36094 2.78936 3.26078 45 - - 1.38629 1.38629 1.38629 1.38629 0.01882 3.98210 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortya_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:52:31 2012 NSEQ 9 EFFN 3.256348 CKSUM 670822545 STATS LOCAL MSV -8.0760 0.71933 STATS LOCAL VITERBI -7.7063 0.71933 STATS LOCAL FORWARD -4.4217 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33894 1.46075 1.37970 1.36979 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 0.00000 * 1 3.06699 2.58138 3.11596 0.18220 1 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 2 3.06699 2.58138 3.11596 0.18220 2 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 3 3.06699 2.58138 3.11596 0.18220 3 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 4 3.06699 2.58138 3.11596 0.18220 4 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 5 2.93249 3.56592 0.11958 3.46834 5 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 6 0.14476 3.35879 2.78795 3.25843 6 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 7 3.40835 0.13320 3.45885 2.81094 7 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 8 3.40835 0.13320 3.45885 2.81094 8 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 9 3.06699 2.58138 3.11596 0.18220 9 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 10 3.40835 0.13320 3.45885 2.81094 10 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 11 2.93249 3.56592 0.11958 3.46834 11 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 12 2.93249 3.56592 0.11958 3.46834 12 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 13 0.14476 3.35879 2.78795 3.25843 13 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 14 3.06699 2.58138 3.11596 0.18220 14 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 15 3.40835 0.13320 3.45885 2.81094 15 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 16 0.14476 3.35879 2.78795 3.25843 16 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 17 2.93249 3.56592 0.11958 3.46834 17 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 18 2.93249 3.56592 0.11958 3.46834 18 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 19 3.06699 2.58138 3.11596 0.18220 19 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 20 0.14476 3.35879 2.78795 3.25843 20 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 21 2.93249 3.56592 0.11958 3.46834 21 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 22 2.93249 3.56592 0.11958 3.46834 22 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 23 2.93249 3.56592 0.11958 3.46834 23 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 24 0.14476 3.35879 2.78795 3.25843 24 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 25 3.06699 2.58138 3.11596 0.18220 25 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 26 0.14476 3.35879 2.78795 3.25843 26 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 27 3.40835 0.13320 3.45885 2.81094 27 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 28 3.40835 0.13320 3.45885 2.81094 28 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 29 3.40835 0.13320 3.45885 2.81094 29 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 30 2.93249 3.56592 0.11958 3.46834 30 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 31 3.40835 0.13320 3.45885 2.81094 31 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 32 3.06699 2.58138 3.11596 0.18220 32 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 33 2.93249 3.56592 0.11958 3.46834 33 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 34 0.14476 3.35879 2.78795 3.25843 34 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 35 0.14476 3.35879 2.78795 3.25843 35 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 36 3.40835 0.13320 3.45885 2.81094 36 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 37 3.06699 2.58138 3.11596 0.18220 37 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 38 3.06699 2.58138 3.11596 0.18220 38 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 39 0.14476 3.35879 2.78795 3.25843 39 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 40 0.14476 3.35879 2.78795 3.25843 40 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 41 2.93249 3.56592 0.11958 3.46834 41 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 42 3.40835 0.13320 3.45885 2.81094 42 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 43 0.14476 3.35879 2.78795 3.25843 43 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 44 3.06699 2.58138 3.11596 0.18220 44 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99936 3.99936 1.46634 0.26236 1.09861 0.40547 45 0.14476 3.35879 2.78795 3.25843 45 - - 1.38629 1.38629 1.38629 1.38629 0.01885 3.98087 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:52:40 2012 NSEQ 2 EFFN 2.000000 CKSUM 1646720026 STATS LOCAL MSV -7.3847 0.72777 STATS LOCAL VITERBI -8.1234 0.72777 STATS LOCAL FORWARD -3.7468 0.72777 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34083 1.40538 1.31636 1.49171 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:54:15 2012 NSEQ 33 EFFN 3.323364 CKSUM 1254720418 STATS LOCAL MSV -8.0184 0.71932 STATS LOCAL VITERBI -7.7627 0.71932 STATS LOCAL FORWARD -4.3197 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33931 1.46585 1.25230 1.50849 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 0.00000 * 1 2.94768 3.58798 0.11714 3.49267 1 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 2 2.94768 3.58798 0.11714 3.49267 2 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 3 3.08883 2.59528 3.13698 0.17864 3 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 4 3.08883 2.59528 3.13698 0.17864 4 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 5 2.94768 3.58798 0.11714 3.49267 5 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 6 0.14187 3.38048 2.80207 3.28217 6 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 7 3.43336 0.13018 3.48281 2.82918 7 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 8 3.43336 0.13018 3.48281 2.82918 8 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 9 3.08883 2.59528 3.13698 0.17864 9 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 10 3.43336 0.13018 3.48281 2.82918 10 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 11 2.94768 3.58798 0.11714 3.49267 11 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 12 2.94768 3.58798 0.11714 3.49267 12 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 13 0.14187 3.38048 2.80207 3.28217 13 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 14 3.08883 2.59528 3.13698 0.17864 14 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 15 3.43336 0.13018 3.48281 2.82918 15 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 16 0.14187 3.38048 2.80207 3.28217 16 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 17 2.94768 3.58798 0.11714 3.49267 17 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 18 2.94768 3.58798 0.11714 3.49267 18 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 19 3.08883 2.59528 3.13698 0.17864 19 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 20 0.14187 3.38048 2.80207 3.28217 20 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 21 2.94768 3.58798 0.11714 3.49267 21 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 22 2.94768 3.58798 0.11714 3.49267 22 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 23 1.89688 2.97415 0.30013 2.84464 23 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 24 0.28830 2.95065 1.97340 2.82731 24 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 25 3.08883 2.59528 3.13698 0.17864 25 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 26 0.14187 3.38048 2.80207 3.28217 26 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 27 3.43336 0.13018 3.48281 2.82918 27 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 28 3.43336 0.13018 3.48281 2.82918 28 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 29 3.43336 0.13018 3.48281 2.82918 29 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 30 2.94768 3.58798 0.11714 3.49267 30 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 31 3.43336 0.13018 3.48281 2.82918 31 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 32 3.08883 2.59528 3.13698 0.17864 32 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 33 2.94768 3.58798 0.11714 3.49267 33 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 34 0.14187 3.38048 2.80207 3.28217 34 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 35 0.14187 3.38048 2.80207 3.28217 35 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 36 3.43336 0.13018 3.48281 2.82918 36 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 37 3.08883 2.59528 3.13698 0.17864 37 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 38 3.08883 2.59528 3.13698 0.17864 38 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 39 0.14187 3.38048 2.80207 3.28217 39 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 40 0.14187 3.38048 2.80207 3.28217 40 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 41 2.94768 3.58798 0.11714 3.49267 41 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 42 3.43336 0.13018 3.48281 2.82918 42 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 43 0.14187 3.38048 2.80207 3.28217 43 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 44 3.08883 2.59528 3.13698 0.17864 44 - - 1.38629 1.38629 1.38629 1.38629 0.03688 4.01157 4.01157 1.46634 0.26236 1.09861 0.40547 45 0.14187 3.38048 2.80207 3.28217 45 - - 1.38629 1.38629 1.38629 1.38629 0.01861 3.99330 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:53:41 2012 NSEQ 123 EFFN 3.667328 CKSUM 357422695 STATS LOCAL MSV -7.5443 0.71933 STATS LOCAL VITERBI -7.5665 0.71933 STATS LOCAL FORWARD -4.2066 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21164 1.45999 1.49119 1.40670 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 0.00000 * 1 2.57888 2.88814 0.28150 2.17322 1 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 2 3.19512 2.66273 3.23915 0.16242 2 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 3 3.19512 2.66273 3.23915 0.16242 3 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 4 3.19512 2.66273 3.23915 0.16242 4 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 5 3.01893 3.69244 0.10632 3.60823 5 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 6 0.12887 3.48452 2.86925 3.39623 6 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 7 3.55279 0.11680 3.59702 2.91534 7 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 8 3.55279 0.11680 3.59702 2.91534 8 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 9 3.19512 2.66273 3.23915 0.16242 9 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 10 3.55279 0.11680 3.59702 2.91534 10 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 11 0.12887 3.48452 2.86925 3.39623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 12 0.23596 3.13078 2.14027 3.01831 12 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 13 0.12887 3.48452 2.86925 3.39623 13 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 14 3.19512 2.66273 3.23915 0.16242 14 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 15 3.55279 0.11680 3.59702 2.91534 15 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 16 0.12887 3.48452 2.86925 3.39623 16 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 17 3.01893 3.69244 0.10632 3.60823 17 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 18 3.01893 3.69244 0.10632 3.60823 18 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 19 3.19512 2.66273 3.23915 0.16242 19 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 20 0.12887 3.48452 2.86925 3.39623 20 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 21 3.01893 3.69244 0.10632 3.60823 21 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 22 3.01893 3.69244 0.10632 3.60823 22 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 23 0.16047 3.36379 2.58263 3.26806 23 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 24 1.91698 1.65881 0.85986 1.42977 24 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 25 3.19512 2.66273 3.23915 0.16242 25 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 26 0.12887 3.48452 2.86925 3.39623 26 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 27 3.55279 0.11680 3.59702 2.91534 27 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 28 2.71946 0.30708 2.20153 2.43195 28 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 29 3.55279 0.11680 3.59702 2.91534 29 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 30 3.01893 3.69244 0.10632 3.60823 30 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 31 3.55279 0.11680 3.59702 2.91534 31 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 32 3.19512 2.66273 3.23915 0.16242 32 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 33 3.01893 3.69244 0.10632 3.60823 33 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 34 0.12887 3.48452 2.86925 3.39623 34 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 35 0.12887 3.48452 2.86925 3.39623 35 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 36 3.55279 0.11680 3.59702 2.91534 36 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 37 3.19512 2.66273 3.23915 0.16242 37 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 38 3.19512 2.66273 3.23915 0.16242 38 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 39 0.12887 3.48452 2.86925 3.39623 39 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 40 0.12887 3.48452 2.86925 3.39623 40 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 41 3.01893 3.69244 0.10632 3.60823 41 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 42 3.55279 0.11680 3.59702 2.91534 42 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 43 0.12887 3.48452 2.86925 3.39623 43 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 44 3.19512 2.66273 3.23915 0.16242 44 - - 1.38629 1.38629 1.38629 1.38629 0.03468 4.07198 4.07198 1.46634 0.26236 1.09861 0.40547 45 0.12887 3.48452 2.86925 3.39623 45 - - 1.38629 1.38629 1.38629 1.38629 0.01749 4.05479 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:53:24 2012 NSEQ 9 EFFN 3.511230 CKSUM 3066240300 STATS LOCAL MSV -7.4695 0.71931 STATS LOCAL VITERBI -7.5436 0.71931 STATS LOCAL FORWARD -4.0531 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19958 1.33621 1.60412 1.44914 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 0.00000 * 1 1.31037 0.70272 2.24865 2.04408 1 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 2 3.14806 2.63290 3.19393 0.16938 2 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 3 3.14806 2.63290 3.19393 0.16938 3 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 4 3.50040 0.12246 3.54695 2.87773 4 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 5 2.98791 3.64678 0.11090 3.55766 5 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 6 0.13441 3.43877 2.83979 3.34604 6 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 7 3.50040 0.12246 3.54695 2.87773 7 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 8 3.50040 0.12246 3.54695 2.87773 8 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 9 3.14806 2.63290 3.19393 0.16938 9 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 10 3.50040 0.12246 3.54695 2.87773 10 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 11 0.13441 3.43877 2.83979 3.34604 11 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 12 0.13441 3.43877 2.83979 3.34604 12 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 13 0.13441 3.43877 2.83979 3.34604 13 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 14 3.14806 2.63290 3.19393 0.16938 14 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 15 3.50040 0.12246 3.54695 2.87773 15 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 16 0.13441 3.43877 2.83979 3.34604 16 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 17 2.98791 3.64678 0.11090 3.55766 17 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 18 2.98791 3.64678 0.11090 3.55766 18 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 19 3.14806 2.63290 3.19393 0.16938 19 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 20 0.13441 3.43877 2.83979 3.34604 20 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 21 2.98791 3.64678 0.11090 3.55766 21 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 22 2.98791 3.64678 0.11090 3.55766 22 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 23 0.13441 3.43877 2.83979 3.34604 23 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 24 2.53695 1.34098 2.60499 0.53546 24 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 25 3.14806 2.63290 3.19393 0.16938 25 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 26 0.13441 3.43877 2.83979 3.34604 26 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 27 3.50040 0.12246 3.54695 2.87773 27 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 28 3.50040 0.12246 3.54695 2.87773 28 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 29 3.50040 0.12246 3.54695 2.87773 29 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 30 2.98791 3.64678 0.11090 3.55766 30 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 31 3.50040 0.12246 3.54695 2.87773 31 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 32 3.14806 2.63290 3.19393 0.16938 32 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 33 2.98791 3.64678 0.11090 3.55766 33 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 34 0.13441 3.43877 2.83979 3.34604 34 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 35 0.13441 3.43877 2.83979 3.34604 35 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 36 3.50040 0.12246 3.54695 2.87773 36 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 37 3.14806 2.63290 3.19393 0.16938 37 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 38 3.14806 2.63290 3.19393 0.16938 38 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 39 0.13441 3.43877 2.83979 3.34604 39 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 40 0.13441 3.43877 2.83979 3.34604 40 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 41 2.98791 3.64678 0.11090 3.55766 41 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 42 3.50040 0.12246 3.54695 2.87773 42 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 43 0.13441 3.43877 2.83979 3.34604 43 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 44 3.14806 2.63290 3.19393 0.16938 44 - - 1.38629 1.38629 1.38629 1.38629 0.03565 4.04502 4.04502 1.46634 0.26236 1.09861 0.40547 45 0.13441 3.43877 2.83979 3.34604 45 - - 1.38629 1.38629 1.38629 1.38629 0.01798 4.02736 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:54:25 2012 NSEQ 3 EFFN 3.000000 CKSUM 857734258 STATS LOCAL MSV -8.0619 0.72029 STATS LOCAL VITERBI -7.8402 0.72029 STATS LOCAL FORWARD -4.1611 0.72029 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27868 1.46381 1.37517 1.43781 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:52:53 2012 NSEQ 2 EFFN 2.000000 CKSUM 1646720026 STATS LOCAL MSV -7.3847 0.72777 STATS LOCAL VITERBI -8.1234 0.72777 STATS LOCAL FORWARD -3.7468 0.72777 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34083 1.40538 1.31636 1.49171 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:54:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 3385694820 STATS LOCAL MSV -7.4277 0.72750 STATS LOCAL VITERBI -8.2460 0.72750 STATS LOCAL FORWARD -3.5982 0.72750 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39862 1.41261 1.20778 1.55735 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:53:54 2012 NSEQ 3 EFFN 3.000000 CKSUM 671474392 STATS LOCAL MSV -7.8722 0.72025 STATS LOCAL VITERBI -7.7348 0.72025 STATS LOCAL FORWARD -3.8214 0.72025 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.17115 1.26836 1.60171 1.57433 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:53:13 2012 NSEQ 19 EFFN 3.288818 CKSUM 2364531488 STATS LOCAL MSV -7.9491 0.71933 STATS LOCAL VITERBI -7.6186 0.71933 STATS LOCAL FORWARD -4.1713 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22037 1.38745 1.60911 1.36609 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 0.00000 * 1 3.07762 2.58815 3.12619 0.18046 1 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 2 3.07762 2.58815 3.12619 0.18046 2 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 3 3.07762 2.58815 3.12619 0.18046 3 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 4 3.07762 2.58815 3.12619 0.18046 4 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 5 2.93991 3.57668 0.11838 3.48020 5 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 6 0.14334 3.36936 2.79484 3.26999 6 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 7 3.42054 0.13172 3.47053 2.81984 7 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 8 3.42054 0.13172 3.47053 2.81984 8 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 9 3.07762 2.58815 3.12619 0.18046 9 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 10 3.42054 0.13172 3.47053 2.81984 10 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 11 0.14334 3.36936 2.79484 3.26999 11 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 12 0.14334 3.36936 2.79484 3.26999 12 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 13 0.14334 3.36936 2.79484 3.26999 13 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 14 3.07762 2.58815 3.12619 0.18046 14 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 15 3.42054 0.13172 3.47053 2.81984 15 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 16 0.14334 3.36936 2.79484 3.26999 16 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 17 2.93991 3.57668 0.11838 3.48020 17 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 18 2.93991 3.57668 0.11838 3.48020 18 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 19 3.07762 2.58815 3.12619 0.18046 19 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 20 0.14334 3.36936 2.79484 3.26999 20 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 21 2.93991 3.57668 0.11838 3.48020 21 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 22 2.93991 3.57668 0.11838 3.48020 22 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 23 0.14334 3.36936 2.79484 3.26999 23 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 24 3.42054 0.13172 3.47053 2.81984 24 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 25 3.07762 2.58815 3.12619 0.18046 25 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 26 0.14334 3.36936 2.79484 3.26999 26 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 27 3.42054 0.13172 3.47053 2.81984 27 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 28 3.42054 0.13172 3.47053 2.81984 28 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 29 3.42054 0.13172 3.47053 2.81984 29 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 30 2.93991 3.57668 0.11838 3.48020 30 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 31 3.42054 0.13172 3.47053 2.81984 31 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 32 3.07762 2.58815 3.12619 0.18046 32 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 33 2.93991 3.57668 0.11838 3.48020 33 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 34 0.14334 3.36936 2.79484 3.26999 34 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 35 0.14334 3.36936 2.79484 3.26999 35 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 36 3.42054 0.13172 3.47053 2.81984 36 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 37 3.07762 2.58815 3.12619 0.18046 37 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 38 3.07762 2.58815 3.12619 0.18046 38 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 39 0.14334 3.36936 2.79484 3.26999 39 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 40 0.14334 3.36936 2.79484 3.26999 40 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 41 2.93991 3.57668 0.11838 3.48020 41 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 42 3.42054 0.13172 3.47053 2.81984 42 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 43 0.14334 3.36936 2.79484 3.26999 43 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 44 3.07762 2.58815 3.12619 0.18046 44 - - 1.38629 1.38629 1.38629 1.38629 0.03712 4.00530 4.00530 1.46634 0.26236 1.09861 0.40547 45 0.14334 3.36936 2.79484 3.26999 45 - - 1.38629 1.38629 1.38629 1.38629 0.01873 3.98691 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fortytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:53:01 2012 NSEQ 455 EFFN 3.294334 CKSUM 4097386875 STATS LOCAL MSV -8.0512 0.71932 STATS LOCAL VITERBI -7.7540 0.71932 STATS LOCAL FORWARD -4.3509 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33774 1.46668 1.24999 1.51247 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 0.00000 * 1 2.94116 3.57850 0.11818 3.48221 1 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 2 2.94116 3.57850 0.11818 3.48221 2 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 3 3.07942 2.58929 3.12792 0.18017 3 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 4 3.07942 2.58929 3.12792 0.18017 4 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 5 2.94116 3.57850 0.11818 3.48221 5 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 6 0.14310 3.37115 2.79600 3.27195 6 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 7 3.42260 0.13147 3.47250 2.82134 7 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 8 3.42260 0.13147 3.47250 2.82134 8 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 9 3.07942 2.58929 3.12792 0.18017 9 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 10 3.42260 0.13147 3.47250 2.82134 10 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 11 2.94116 3.57850 0.11818 3.48221 11 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 12 2.62230 3.42066 0.15271 3.31614 12 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 13 0.14310 3.37115 2.79600 3.27195 13 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 14 3.07942 2.58929 3.12792 0.18017 14 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 15 3.42260 0.13147 3.47250 2.82134 15 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 16 0.17962 3.23881 2.50564 3.13311 16 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 17 2.81885 3.35704 0.13881 3.34966 17 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 18 2.94116 3.57850 0.11818 3.48221 18 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 19 2.95362 2.54048 2.85904 0.20863 19 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 20 0.15748 3.31657 2.66958 3.21526 20 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 21 2.94116 3.57850 0.11818 3.48221 21 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 22 2.94116 3.57850 0.11818 3.48221 22 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 23 2.51884 3.36233 0.16702 3.25420 23 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 24 0.16280 3.29721 2.62721 3.19489 24 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 25 3.07942 2.58929 3.12792 0.18017 25 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 26 0.14310 3.37115 2.79600 3.27195 26 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 27 3.42260 0.13147 3.47250 2.82134 27 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 28 3.42260 0.13147 3.47250 2.82134 28 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 29 3.42260 0.13147 3.47250 2.82134 29 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 30 2.94116 3.57850 0.11818 3.48221 30 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 31 3.42260 0.13147 3.47250 2.82134 31 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 32 3.07942 2.58929 3.12792 0.18017 32 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 33 2.94116 3.57850 0.11818 3.48221 33 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 34 0.14310 3.37115 2.79600 3.27195 34 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 35 0.14310 3.37115 2.79600 3.27195 35 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 36 3.42260 0.13147 3.47250 2.82134 36 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 37 3.07942 2.58929 3.12792 0.18017 37 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 38 3.07942 2.58929 3.12792 0.18017 38 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 39 0.14310 3.37115 2.79600 3.27195 39 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 40 0.14310 3.37115 2.79600 3.27195 40 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 41 2.94116 3.57850 0.11818 3.48221 41 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 42 3.42260 0.13147 3.47250 2.82134 42 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 43 0.14310 3.37115 2.79600 3.27195 43 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 44 3.07942 2.58929 3.12792 0.18017 44 - - 1.38629 1.38629 1.38629 1.38629 0.03708 4.00630 4.00630 1.46634 0.26236 1.09861 0.40547 45 0.14310 3.37115 2.79600 3.27195 45 - - 1.38629 1.38629 1.38629 1.38629 0.01871 3.98794 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:03 2012 NSEQ 2 EFFN 2.000000 CKSUM 3456085325 STATS LOCAL MSV -7.4895 0.72778 STATS LOCAL VITERBI -8.1886 0.72778 STATS LOCAL FORWARD -3.7960 0.72778 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28710 1.46897 1.31168 1.49432 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_fourteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:40:51 2012 NSEQ 5 EFFN 3.198242 CKSUM 4201851627 STATS LOCAL MSV -8.0638 0.71931 STATS LOCAL VITERBI -7.7568 0.71931 STATS LOCAL FORWARD -4.2112 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27931 1.32915 1.37854 1.58416 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 0.00000 * 1 3.38618 0.13595 3.43760 2.79470 1 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 2 2.91894 3.54631 0.12180 3.44673 2 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 3 3.38618 0.13595 3.43760 2.79470 3 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 4 3.04773 2.56910 3.09744 0.18541 4 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 5 2.91894 3.54631 0.12180 3.44673 5 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 6 0.14739 3.33958 2.77542 3.23743 6 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 7 3.38618 0.13595 3.43760 2.79470 7 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 8 3.38618 0.13595 3.43760 2.79470 8 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 9 3.04773 2.56910 3.09744 0.18541 9 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 10 3.38618 0.13595 3.43760 2.79470 10 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 11 2.91894 3.54631 0.12180 3.44673 11 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 12 2.91894 3.54631 0.12180 3.44673 12 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 13 0.14739 3.33958 2.77542 3.23743 13 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 14 3.04773 2.56910 3.09744 0.18541 14 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 15 3.38618 0.13595 3.43760 2.79470 15 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 16 0.14739 3.33958 2.77542 3.23743 16 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 17 2.91894 3.54631 0.12180 3.44673 17 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 18 2.91894 3.54631 0.12180 3.44673 18 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 19 3.04773 2.56910 3.09744 0.18541 19 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 20 0.14739 3.33958 2.77542 3.23743 20 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 21 2.91894 3.54631 0.12180 3.44673 21 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 22 2.91894 3.54631 0.12180 3.44673 22 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 23 0.14739 3.33958 2.77542 3.23743 23 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 24 0.14739 3.33958 2.77542 3.23743 24 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 25 3.04773 2.56910 3.09744 0.18541 25 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 26 0.14739 3.33958 2.77542 3.23743 26 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 27 3.38618 0.13595 3.43760 2.79470 27 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 28 3.38618 0.13595 3.43760 2.79470 28 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 29 3.38618 0.13595 3.43760 2.79470 29 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 30 2.91894 3.54631 0.12180 3.44673 30 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 31 3.38618 0.13595 3.43760 2.79470 31 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 32 3.04773 2.56910 3.09744 0.18541 32 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 33 2.91894 3.54631 0.12180 3.44673 33 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 34 0.14739 3.33958 2.77542 3.23743 34 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 35 0.14739 3.33958 2.77542 3.23743 35 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 36 3.38618 0.13595 3.43760 2.79470 36 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 37 3.04773 2.56910 3.09744 0.18541 37 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 38 3.04773 2.56910 3.09744 0.18541 38 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 39 0.14739 3.33958 2.77542 3.23743 39 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 40 0.14739 3.33958 2.77542 3.23743 40 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 41 2.91894 3.54631 0.12180 3.44673 41 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 42 3.38618 0.13595 3.43760 2.79470 42 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 43 0.14739 3.33958 2.77542 3.23743 43 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 44 3.04773 2.56910 3.09744 0.18541 44 - - 1.38629 1.38629 1.38629 1.38629 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547 45 0.14739 3.33958 2.77542 3.23743 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.96996 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:59 2012 NSEQ 66 EFFN 3.250854 CKSUM 1822021581 STATS LOCAL MSV -8.0686 0.71931 STATS LOCAL VITERBI -7.5453 0.71931 STATS LOCAL FORWARD -4.2192 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27832 1.39210 1.44784 1.43605 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 0.00000 * 1 2.93122 3.56409 0.11978 3.46631 1 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 2 3.06518 2.58023 3.11423 0.18250 2 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 3 3.06518 2.58023 3.11423 0.18250 3 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 4 3.06518 2.58023 3.11423 0.18250 4 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 5 2.93122 3.56409 0.11978 3.46631 5 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 6 0.14501 3.35699 2.78678 3.25646 6 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 7 3.40627 0.13346 3.45686 2.80942 7 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 8 3.40627 0.13346 3.45686 2.80942 8 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 9 3.06518 2.58023 3.11423 0.18250 9 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 10 3.40627 0.13346 3.45686 2.80942 10 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 11 0.14501 3.35699 2.78678 3.25646 11 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 12 0.14501 3.35699 2.78678 3.25646 12 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 13 0.14501 3.35699 2.78678 3.25646 13 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 14 3.06518 2.58023 3.11423 0.18250 14 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 15 3.40627 0.13346 3.45686 2.80942 15 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 16 0.14501 3.35699 2.78678 3.25646 16 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 17 2.93122 3.56409 0.11978 3.46631 17 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 18 2.93122 3.56409 0.11978 3.46631 18 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 19 3.06518 2.58023 3.11423 0.18250 19 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 20 0.14501 3.35699 2.78678 3.25646 20 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 21 2.93122 3.56409 0.11978 3.46631 21 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 22 2.93122 3.56409 0.11978 3.46631 22 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 23 2.93122 3.56409 0.11978 3.46631 23 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 24 3.40627 0.13346 3.45686 2.80942 24 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 25 3.06518 2.58023 3.11423 0.18250 25 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 26 0.14501 3.35699 2.78678 3.25646 26 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 27 3.40627 0.13346 3.45686 2.80942 27 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 28 3.40627 0.13346 3.45686 2.80942 28 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 29 3.40627 0.13346 3.45686 2.80942 29 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 30 2.93122 3.56409 0.11978 3.46631 30 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 31 3.40627 0.13346 3.45686 2.80942 31 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 32 3.06518 2.58023 3.11423 0.18250 32 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 33 2.93122 3.56409 0.11978 3.46631 33 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 34 0.14501 3.35699 2.78678 3.25646 34 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 35 0.14501 3.35699 2.78678 3.25646 35 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 36 3.40627 0.13346 3.45686 2.80942 36 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 37 3.06518 2.58023 3.11423 0.18250 37 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 38 3.06518 2.58023 3.11423 0.18250 38 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 39 0.14501 3.35699 2.78678 3.25646 39 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 40 0.14501 3.35699 2.78678 3.25646 40 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 41 2.93122 3.56409 0.11978 3.46631 41 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 42 3.40627 0.13346 3.45686 2.80942 42 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 43 0.14501 3.35699 2.78678 3.25646 43 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 44 3.06518 2.58023 3.11423 0.18250 44 - - 1.38629 1.38629 1.38629 1.38629 0.03738 3.99836 3.99836 1.46634 0.26236 1.09861 0.40547 45 0.14501 3.35699 2.78678 3.25646 45 - - 1.38629 1.38629 1.38629 1.38629 0.01887 3.97984 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_nineteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:41:50 2012 NSEQ 4 EFFN 3.261719 CKSUM 3498045266 STATS LOCAL MSV -7.9456 0.71932 STATS LOCAL VITERBI -7.6255 0.71932 STATS LOCAL FORWARD -4.0520 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28150 1.26028 1.61286 1.42925 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 0.00000 * 1 3.06875 2.58250 3.11766 0.18191 1 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 2 3.06875 2.58250 3.11766 0.18191 2 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 3 3.06875 2.58250 3.11766 0.18191 3 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 4 3.41037 0.13295 3.46079 2.81242 4 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 5 2.93372 3.56771 0.11938 3.47031 5 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 6 3.41037 0.13295 3.46079 2.81242 6 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 7 3.41037 0.13295 3.46079 2.81242 7 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 8 3.41037 0.13295 3.46079 2.81242 8 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 9 3.06875 2.58250 3.11766 0.18191 9 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 10 3.41037 0.13295 3.46079 2.81242 10 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 11 0.14453 3.36055 2.78910 3.26035 11 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 12 0.14453 3.36055 2.78910 3.26035 12 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 13 0.14453 3.36055 2.78910 3.26035 13 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 14 3.06875 2.58250 3.11766 0.18191 14 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 15 3.41037 0.13295 3.46079 2.81242 15 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 16 0.14453 3.36055 2.78910 3.26035 16 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 17 2.93372 3.56771 0.11938 3.47031 17 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 18 2.93372 3.56771 0.11938 3.47031 18 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 19 3.06875 2.58250 3.11766 0.18191 19 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 20 0.14453 3.36055 2.78910 3.26035 20 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 21 2.93372 3.56771 0.11938 3.47031 21 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 22 2.93372 3.56771 0.11938 3.47031 22 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 23 0.14453 3.36055 2.78910 3.26035 23 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 24 3.41037 0.13295 3.46079 2.81242 24 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 25 3.06875 2.58250 3.11766 0.18191 25 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 26 0.14453 3.36055 2.78910 3.26035 26 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 27 3.41037 0.13295 3.46079 2.81242 27 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 28 3.41037 0.13295 3.46079 2.81242 28 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 29 3.41037 0.13295 3.46079 2.81242 29 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 30 2.93372 3.56771 0.11938 3.47031 30 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 31 3.41037 0.13295 3.46079 2.81242 31 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 32 3.06875 2.58250 3.11766 0.18191 32 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 33 2.93372 3.56771 0.11938 3.47031 33 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 34 0.14453 3.36055 2.78910 3.26035 34 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 35 0.14453 3.36055 2.78910 3.26035 35 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 36 3.41037 0.13295 3.46079 2.81242 36 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 37 3.06875 2.58250 3.11766 0.18191 37 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 38 3.06875 2.58250 3.11766 0.18191 38 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 39 0.14453 3.36055 2.78910 3.26035 39 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 40 0.14453 3.36055 2.78910 3.26035 40 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 41 2.93372 3.56771 0.11938 3.47031 41 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 42 3.41037 0.13295 3.46079 2.81242 42 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 43 0.14453 3.36055 2.78910 3.26035 43 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 44 3.06875 2.58250 3.11766 0.18191 44 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 45 0.14453 3.36055 2.78910 3.26035 45 - - 1.38629 1.38629 1.38629 1.38629 0.01883 3.98187 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:37:32 2012 NSEQ 30 EFFN 3.197021 CKSUM 1055639096 STATS LOCAL MSV -8.0574 0.71933 STATS LOCAL VITERBI -7.7449 0.71933 STATS LOCAL FORWARD -4.3675 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33801 1.46929 1.24762 1.51252 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 0.00000 * 1 2.91865 3.54590 0.12184 3.44627 1 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 2 2.91865 3.54590 0.12184 3.44627 2 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 3 3.04732 2.56884 3.09705 0.18548 3 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 4 3.04732 2.56884 3.09705 0.18548 4 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 5 2.91865 3.54590 0.12184 3.44627 5 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 6 0.14744 3.33918 2.77515 3.23698 6 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 7 3.38570 0.13601 3.43715 2.79436 7 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 8 3.38570 0.13601 3.43715 2.79436 8 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 9 3.04732 2.56884 3.09705 0.18548 9 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 10 3.38570 0.13601 3.43715 2.79436 10 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 11 2.91865 3.54590 0.12184 3.44627 11 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 12 2.91865 3.54590 0.12184 3.44627 12 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 13 0.14744 3.33918 2.77515 3.23698 13 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 14 3.04732 2.56884 3.09705 0.18548 14 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 15 3.38570 0.13601 3.43715 2.79436 15 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 16 0.14744 3.33918 2.77515 3.23698 16 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 17 2.91865 3.54590 0.12184 3.44627 17 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 18 2.91865 3.54590 0.12184 3.44627 18 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 19 3.04732 2.56884 3.09705 0.18548 19 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 20 0.14744 3.33918 2.77515 3.23698 20 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 21 2.91865 3.54590 0.12184 3.44627 21 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 22 2.91865 3.54590 0.12184 3.44627 22 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 23 2.91865 3.54590 0.12184 3.44627 23 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 24 0.14744 3.33918 2.77515 3.23698 24 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 25 3.04732 2.56884 3.09705 0.18548 25 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 26 0.14744 3.33918 2.77515 3.23698 26 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 27 3.38570 0.13601 3.43715 2.79436 27 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 28 3.38570 0.13601 3.43715 2.79436 28 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 29 3.38570 0.13601 3.43715 2.79436 29 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 30 2.91865 3.54590 0.12184 3.44627 30 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 31 3.38570 0.13601 3.43715 2.79436 31 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 32 3.04732 2.56884 3.09705 0.18548 32 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 33 2.91865 3.54590 0.12184 3.44627 33 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 34 0.14744 3.33918 2.77515 3.23698 34 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 35 0.14744 3.33918 2.77515 3.23698 35 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 36 3.38570 0.13601 3.43715 2.79436 36 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 37 3.04732 2.56884 3.09705 0.18548 37 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 38 3.04732 2.56884 3.09705 0.18548 38 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 39 0.14744 3.33918 2.77515 3.23698 39 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 40 0.14744 3.33918 2.77515 3.23698 40 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 41 2.91865 3.54590 0.12184 3.44627 41 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 42 3.38570 0.13601 3.43715 2.79436 42 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 43 0.14744 3.33918 2.77515 3.23698 43 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 44 3.04732 2.56884 3.09705 0.18548 44 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 45 0.14744 3.33918 2.77515 3.23698 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96973 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:37 2012 NSEQ 92 EFFN 3.265259 CKSUM 3787431590 STATS LOCAL MSV -8.0243 0.71933 STATS LOCAL VITERBI -7.7987 0.71933 STATS LOCAL FORWARD -4.3130 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33962 1.46395 1.31250 1.43721 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 0.00000 * 1 2.93454 3.56889 0.11924 3.47161 1 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 2 3.06991 2.58324 3.11878 0.18172 2 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 3 3.06991 2.58324 3.11878 0.18172 3 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 4 3.06991 2.58324 3.11878 0.18172 4 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 5 2.93454 3.56889 0.11924 3.47161 5 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 6 0.14437 3.36170 2.78985 3.26161 6 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 7 3.41171 0.13279 3.46207 2.81339 7 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 8 3.41171 0.13279 3.46207 2.81339 8 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 9 3.06991 2.58324 3.11878 0.18172 9 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 10 3.41171 0.13279 3.46207 2.81339 10 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 11 2.93454 3.56889 0.11924 3.47161 11 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 12 2.93454 3.56889 0.11924 3.47161 12 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 13 0.14437 3.36170 2.78985 3.26161 13 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 14 3.06991 2.58324 3.11878 0.18172 14 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 15 3.41171 0.13279 3.46207 2.81339 15 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 16 0.14437 3.36170 2.78985 3.26161 16 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 17 2.93454 3.56889 0.11924 3.47161 17 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 18 2.93454 3.56889 0.11924 3.47161 18 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 19 3.06991 2.58324 3.11878 0.18172 19 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 20 0.14437 3.36170 2.78985 3.26161 20 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 21 2.93454 3.56889 0.11924 3.47161 21 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 22 2.93454 3.56889 0.11924 3.47161 22 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 23 0.18070 3.23058 2.50338 3.12421 23 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 24 2.68685 3.31072 0.16559 3.03618 24 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 25 3.06991 2.58324 3.11878 0.18172 25 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 26 0.14437 3.36170 2.78985 3.26161 26 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 27 3.41171 0.13279 3.46207 2.81339 27 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 28 3.41171 0.13279 3.46207 2.81339 28 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 29 3.41171 0.13279 3.46207 2.81339 29 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 30 2.93454 3.56889 0.11924 3.47161 30 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 31 3.41171 0.13279 3.46207 2.81339 31 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 32 3.06991 2.58324 3.11878 0.18172 32 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 33 2.93454 3.56889 0.11924 3.47161 33 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 34 0.14437 3.36170 2.78985 3.26161 34 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 35 0.14437 3.36170 2.78985 3.26161 35 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 36 3.41171 0.13279 3.46207 2.81339 36 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 37 3.06991 2.58324 3.11878 0.18172 37 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 38 3.06991 2.58324 3.11878 0.18172 38 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 39 0.14437 3.36170 2.78985 3.26161 39 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 40 0.14437 3.36170 2.78985 3.26161 40 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 41 2.93454 3.56889 0.11924 3.47161 41 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 42 3.41171 0.13279 3.46207 2.81339 42 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 43 0.14437 3.36170 2.78985 3.26161 43 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 44 3.06991 2.58324 3.11878 0.18172 44 - - 1.38629 1.38629 1.38629 1.38629 0.03728 4.00100 4.00100 1.46634 0.26236 1.09861 0.40547 45 0.14437 3.36170 2.78985 3.26161 45 - - 1.38629 1.38629 1.38629 1.38629 0.01881 3.98253 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_seventeen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:41:26 2012 NSEQ 10 EFFN 3.461914 CKSUM 2775193365 STATS LOCAL MSV -7.4327 0.71933 STATS LOCAL VITERBI -7.5773 0.71933 STATS LOCAL FORWARD -4.1592 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15406 1.42255 1.58298 1.43471 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 0.00000 * 1 0.13628 3.42382 2.83014 3.32964 1 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 2 3.13280 2.62321 3.17925 0.17172 2 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 3 3.13280 2.62321 3.17925 0.17172 3 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 4 2.88135 2.05857 2.93744 0.27010 4 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 5 2.97767 3.63176 0.11246 3.54105 5 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 6 0.13628 3.42382 2.83014 3.32964 6 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 7 3.48323 0.12439 3.53054 2.86534 7 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 8 3.48323 0.12439 3.53054 2.86534 8 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 9 3.13280 2.62321 3.17925 0.17172 9 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 10 3.48323 0.12439 3.53054 2.86534 10 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 11 0.13628 3.42382 2.83014 3.32964 11 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 12 0.13628 3.42382 2.83014 3.32964 12 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 13 0.13628 3.42382 2.83014 3.32964 13 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 14 3.13280 2.62321 3.17925 0.17172 14 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 15 3.48323 0.12439 3.53054 2.86534 15 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 16 0.13628 3.42382 2.83014 3.32964 16 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 17 2.97767 3.63176 0.11246 3.54105 17 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 18 2.97767 3.63176 0.11246 3.54105 18 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 19 3.13280 2.62321 3.17925 0.17172 19 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 20 0.13628 3.42382 2.83014 3.32964 20 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 21 2.97767 3.63176 0.11246 3.54105 21 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 22 2.97767 3.63176 0.11246 3.54105 22 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 23 0.13628 3.42382 2.83014 3.32964 23 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 24 3.48323 0.12439 3.53054 2.86534 24 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 25 3.13280 2.62321 3.17925 0.17172 25 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 26 0.13628 3.42382 2.83014 3.32964 26 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 27 3.48323 0.12439 3.53054 2.86534 27 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 28 2.11727 0.80411 1.21270 2.00423 28 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 29 3.48323 0.12439 3.53054 2.86534 29 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 30 2.97767 3.63176 0.11246 3.54105 30 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 31 3.48323 0.12439 3.53054 2.86534 31 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 32 3.13280 2.62321 3.17925 0.17172 32 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 33 2.97767 3.63176 0.11246 3.54105 33 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 34 0.13628 3.42382 2.83014 3.32964 34 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 35 0.13628 3.42382 2.83014 3.32964 35 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 36 3.48323 0.12439 3.53054 2.86534 36 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 37 3.13280 2.62321 3.17925 0.17172 37 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 38 3.13280 2.62321 3.17925 0.17172 38 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 39 0.13628 3.42382 2.83014 3.32964 39 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 40 0.13628 3.42382 2.83014 3.32964 40 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 41 2.97767 3.63176 0.11246 3.54105 41 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 42 3.48323 0.12439 3.53054 2.86534 42 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 43 0.13628 3.42382 2.83014 3.32964 43 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 44 3.13280 2.62321 3.17925 0.17172 44 - - 1.38629 1.38629 1.38629 1.38629 0.03596 4.03635 4.03635 1.46634 0.26236 1.09861 0.40547 45 0.13628 3.42382 2.83014 3.32964 45 - - 1.38629 1.38629 1.38629 1.38629 0.01814 4.01853 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:38:27 2012 NSEQ 11 EFFN 3.359619 CKSUM 2519316989 STATS LOCAL MSV -8.0240 0.71932 STATS LOCAL VITERBI -7.6633 0.71932 STATS LOCAL FORWARD -4.2374 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15520 1.46404 1.42040 1.55075 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 0.00000 * 1 0.14035 3.39202 2.80955 3.29480 1 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 2 2.95571 3.59967 0.11586 3.50558 2 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 3 2.10635 2.14324 1.09833 0.84953 3 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 4 3.10049 2.60269 3.14819 0.17677 4 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 5 2.95571 3.59967 0.11586 3.50558 5 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 6 0.14035 3.39202 2.80955 3.29480 6 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 7 3.44665 0.12860 3.49553 2.83884 7 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 8 3.44665 0.12860 3.49553 2.83884 8 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 9 3.10049 2.60269 3.14819 0.17677 9 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 10 3.44665 0.12860 3.49553 2.83884 10 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 11 2.95571 3.59967 0.11586 3.50558 11 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 12 0.14035 3.39202 2.80955 3.29480 12 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 13 0.14035 3.39202 2.80955 3.29480 13 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 14 3.10049 2.60269 3.14819 0.17677 14 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 15 3.44665 0.12860 3.49553 2.83884 15 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 16 0.14035 3.39202 2.80955 3.29480 16 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 17 2.95571 3.59967 0.11586 3.50558 17 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 18 2.95571 3.59967 0.11586 3.50558 18 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 19 3.10049 2.60269 3.14819 0.17677 19 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 20 0.14035 3.39202 2.80955 3.29480 20 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 21 2.95571 3.59967 0.11586 3.50558 21 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 22 2.95571 3.59967 0.11586 3.50558 22 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 23 0.14035 3.39202 2.80955 3.29480 23 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 24 0.14035 3.39202 2.80955 3.29480 24 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 25 3.10049 2.60269 3.14819 0.17677 25 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 26 0.14035 3.39202 2.80955 3.29480 26 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 27 3.44665 0.12860 3.49553 2.83884 27 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 28 3.44665 0.12860 3.49553 2.83884 28 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 29 3.44665 0.12860 3.49553 2.83884 29 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 30 2.95571 3.59967 0.11586 3.50558 30 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 31 3.44665 0.12860 3.49553 2.83884 31 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 32 3.10049 2.60269 3.14819 0.17677 32 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 33 2.95571 3.59967 0.11586 3.50558 33 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 34 0.14035 3.39202 2.80955 3.29480 34 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 35 0.14035 3.39202 2.80955 3.29480 35 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 36 3.44665 0.12860 3.49553 2.83884 36 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 37 3.10049 2.60269 3.14819 0.17677 37 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 38 3.10049 2.60269 3.14819 0.17677 38 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 39 0.14035 3.39202 2.80955 3.29480 39 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 40 0.14035 3.39202 2.80955 3.29480 40 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 41 2.95571 3.59967 0.11586 3.50558 41 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 42 3.44665 0.12860 3.49553 2.83884 42 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 43 0.14035 3.39202 2.80955 3.29480 43 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 44 3.10049 2.60269 3.14819 0.17677 44 - - 1.38629 1.38629 1.38629 1.38629 0.03664 4.01811 4.01811 1.46634 0.26236 1.09861 0.40547 45 0.14035 3.39202 2.80955 3.29480 45 - - 1.38629 1.38629 1.38629 1.38629 0.01849 3.99996 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_sixteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:41:12 2012 NSEQ 17 EFFN 3.482178 CKSUM 2034153312 STATS LOCAL MSV -7.4469 0.71933 STATS LOCAL VITERBI -7.5313 0.71933 STATS LOCAL FORWARD -4.1349 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21327 1.34010 1.60666 1.42546 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 0.00000 * 1 3.49032 0.12359 3.53732 2.87046 1 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 2 3.13909 2.62721 3.18530 0.17075 2 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 3 3.13909 2.62721 3.18530 0.17075 3 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 4 2.57697 1.44715 2.64365 0.48182 4 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 5 2.98191 3.63797 0.11181 3.54791 5 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 6 0.13550 3.42999 2.83413 3.33641 6 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 7 3.49032 0.12359 3.53732 2.87046 7 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 8 3.49032 0.12359 3.53732 2.87046 8 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 9 3.13909 2.62721 3.18530 0.17075 9 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 10 3.49032 0.12359 3.53732 2.87046 10 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 11 0.13550 3.42999 2.83413 3.33641 11 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 12 0.13550 3.42999 2.83413 3.33641 12 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 13 0.13550 3.42999 2.83413 3.33641 13 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 14 3.13909 2.62721 3.18530 0.17075 14 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 15 3.49032 0.12359 3.53732 2.87046 15 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 16 0.13550 3.42999 2.83413 3.33641 16 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 17 2.98191 3.63797 0.11181 3.54791 17 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 18 2.98191 3.63797 0.11181 3.54791 18 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 19 3.13909 2.62721 3.18530 0.17075 19 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 20 0.13550 3.42999 2.83413 3.33641 20 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 21 2.98191 3.63797 0.11181 3.54791 21 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 22 2.98191 3.63797 0.11181 3.54791 22 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 23 0.13550 3.42999 2.83413 3.33641 23 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 24 2.45185 0.76346 2.52404 1.00054 24 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 25 3.13909 2.62721 3.18530 0.17075 25 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 26 0.13550 3.42999 2.83413 3.33641 26 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 27 3.49032 0.12359 3.53732 2.87046 27 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 28 3.49032 0.12359 3.53732 2.87046 28 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 29 3.49032 0.12359 3.53732 2.87046 29 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 30 2.98191 3.63797 0.11181 3.54791 30 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 31 3.49032 0.12359 3.53732 2.87046 31 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 32 3.13909 2.62721 3.18530 0.17075 32 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 33 2.98191 3.63797 0.11181 3.54791 33 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 34 0.13550 3.42999 2.83413 3.33641 34 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 35 0.13550 3.42999 2.83413 3.33641 35 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 36 3.49032 0.12359 3.53732 2.87046 36 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 37 3.13909 2.62721 3.18530 0.17075 37 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 38 3.13909 2.62721 3.18530 0.17075 38 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 39 0.13550 3.42999 2.83413 3.33641 39 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 40 0.13550 3.42999 2.83413 3.33641 40 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 41 2.98191 3.63797 0.11181 3.54791 41 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 42 3.49032 0.12359 3.53732 2.87046 42 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 43 0.13550 3.42999 2.83413 3.33641 43 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 44 3.13909 2.62721 3.18530 0.17075 44 - - 1.38629 1.38629 1.38629 1.38629 0.03583 4.03992 4.03992 1.46634 0.26236 1.09861 0.40547 45 0.13550 3.42999 2.83413 3.33641 45 - - 1.38629 1.38629 1.38629 1.38629 0.01808 4.02216 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_tena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:10 2012 NSEQ 2 EFFN 2.000000 CKSUM 3889312004 STATS LOCAL MSV -7.2525 0.72777 STATS LOCAL VITERBI -8.2783 0.72777 STATS LOCAL FORWARD -3.5765 0.72777 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34300 1.40720 1.31247 1.49185 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_tenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:17 2012 NSEQ 2 EFFN 2.000000 CKSUM 2137028689 STATS LOCAL MSV -7.5021 0.72759 STATS LOCAL VITERBI -8.2393 0.72759 STATS LOCAL FORWARD -3.7046 0.72759 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28836 1.47387 1.25623 1.55820 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_tenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:39:25 2012 NSEQ 3 EFFN 3.000000 CKSUM 2593204555 STATS LOCAL MSV -7.9484 0.72006 STATS LOCAL VITERBI -7.7286 0.72006 STATS LOCAL FORWARD -4.3667 0.72006 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27778 1.47267 1.24715 1.58615 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirteen_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:40:40 2012 NSEQ 45 EFFN 3.309631 CKSUM 2237963263 STATS LOCAL MSV -8.0951 0.71932 STATS LOCAL VITERBI -7.7143 0.71932 STATS LOCAL FORWARD -4.4333 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33739 1.45410 1.37864 1.37857 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 0.00000 * 1 2.90598 2.18502 2.96074 0.24712 1 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 2 2.90598 2.18502 2.96074 0.24712 2 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 3 3.08438 2.59245 3.13270 0.17936 3 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 4 3.08438 2.59245 3.13270 0.17936 4 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 5 2.94461 3.58351 0.11763 3.48773 5 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 6 0.14245 3.37608 2.79920 3.27734 6 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 7 3.42828 0.13078 3.47795 2.82548 7 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 8 3.42828 0.13078 3.47795 2.82548 8 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 9 3.08438 2.59245 3.13270 0.17936 9 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 10 3.42828 0.13078 3.47795 2.82548 10 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 11 2.94461 3.58351 0.11763 3.48773 11 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 12 2.94461 3.58351 0.11763 3.48773 12 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 13 0.14245 3.37608 2.79920 3.27734 13 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 14 3.08438 2.59245 3.13270 0.17936 14 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 15 3.42828 0.13078 3.47795 2.82548 15 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 16 0.14245 3.37608 2.79920 3.27734 16 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 17 2.94461 3.58351 0.11763 3.48773 17 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 18 2.94461 3.58351 0.11763 3.48773 18 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 19 3.08438 2.59245 3.13270 0.17936 19 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 20 0.14245 3.37608 2.79920 3.27734 20 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 21 2.94461 3.58351 0.11763 3.48773 21 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 22 2.94461 3.58351 0.11763 3.48773 22 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 23 2.94461 3.58351 0.11763 3.48773 23 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 24 0.14245 3.37608 2.79920 3.27734 24 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 25 3.08438 2.59245 3.13270 0.17936 25 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 26 0.14245 3.37608 2.79920 3.27734 26 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 27 3.42828 0.13078 3.47795 2.82548 27 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 28 3.42828 0.13078 3.47795 2.82548 28 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 29 3.42828 0.13078 3.47795 2.82548 29 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 30 2.94461 3.58351 0.11763 3.48773 30 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 31 3.42828 0.13078 3.47795 2.82548 31 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 32 3.08438 2.59245 3.13270 0.17936 32 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 33 2.94461 3.58351 0.11763 3.48773 33 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 34 0.14245 3.37608 2.79920 3.27734 34 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 35 0.14245 3.37608 2.79920 3.27734 35 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 36 3.42828 0.13078 3.47795 2.82548 36 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 37 3.08438 2.59245 3.13270 0.17936 37 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 38 3.08438 2.59245 3.13270 0.17936 38 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 39 0.14245 3.37608 2.79920 3.27734 39 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 40 0.14245 3.37608 2.79920 3.27734 40 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 41 2.94461 3.58351 0.11763 3.48773 41 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 42 3.42828 0.13078 3.47795 2.82548 42 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 43 0.14245 3.37608 2.79920 3.27734 43 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 44 3.08438 2.59245 3.13270 0.17936 44 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00908 4.00908 1.46634 0.26236 1.09861 0.40547 45 0.14245 3.37608 2.79920 3.27734 45 - - 1.38629 1.38629 1.38629 1.38629 0.01866 3.99077 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:50:32 2012 NSEQ 14 EFFN 3.824707 CKSUM 3896112458 STATS LOCAL MSV -7.1810 0.71932 STATS LOCAL VITERBI -7.6205 0.71932 STATS LOCAL FORWARD -3.9067 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.09067 1.45025 1.51531 1.56181 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 0.00000 * 1 0.31037 2.13809 2.54190 2.65605 1 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 2 3.02946 0.26565 3.09100 1.96973 2 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 3 3.24066 2.69161 3.28291 0.15599 3 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 4 3.24066 2.69161 3.28291 0.15599 4 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 5 3.04823 3.73576 0.10217 3.65627 5 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 6 3.04823 3.73576 0.10217 3.65627 6 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 7 3.24066 2.69161 3.28291 0.15599 7 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 8 3.60274 0.11168 3.64471 2.95097 8 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 9 3.24066 2.69161 3.28291 0.15599 9 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 10 2.26277 1.53314 0.55111 2.26556 10 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 11 0.12380 3.52833 2.89740 3.44436 11 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 12 0.12380 3.52833 2.89740 3.44436 12 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 13 0.12380 3.52833 2.89740 3.44436 13 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 14 3.24066 2.69161 3.28291 0.15599 14 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 15 3.60274 0.11168 3.64471 2.95097 15 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 16 1.47689 2.81563 0.44133 2.67934 16 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 17 1.52546 2.84390 0.41907 2.70873 17 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 18 3.04823 3.73576 0.10217 3.65627 18 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 19 3.60274 0.11168 3.64471 2.95097 19 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 20 0.12380 3.52833 2.89740 3.44436 20 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 21 0.12380 3.52833 2.89740 3.44436 21 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 22 3.04823 3.73576 0.10217 3.65627 22 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 23 0.12380 3.52833 2.89740 3.44436 23 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 24 0.12380 3.52833 2.89740 3.44436 24 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 25 0.25071 3.11793 2.05627 3.00427 25 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 26 0.12380 3.52833 2.89740 3.44436 26 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 27 3.60274 0.11168 3.64471 2.95097 27 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 28 3.60274 0.11168 3.64471 2.95097 28 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 29 3.60274 0.11168 3.64471 2.95097 29 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 30 3.04823 3.73576 0.10217 3.65627 30 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 31 3.60274 0.11168 3.64471 2.95097 31 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 32 3.24066 2.69161 3.28291 0.15599 32 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 33 3.04823 3.73576 0.10217 3.65627 33 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 34 0.12380 3.52833 2.89740 3.44436 34 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 35 0.12380 3.52833 2.89740 3.44436 35 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 36 3.60274 0.11168 3.64471 2.95097 36 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 37 3.24066 2.69161 3.28291 0.15599 37 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 38 3.24066 2.69161 3.28291 0.15599 38 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 39 0.12380 3.52833 2.89740 3.44436 39 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 40 0.12380 3.52833 2.89740 3.44436 40 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 41 3.04823 3.73576 0.10217 3.65627 41 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 42 3.60274 0.11168 3.64471 2.95097 42 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 43 0.12380 3.52833 2.89740 3.44436 43 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 44 3.24066 2.69161 3.28291 0.15599 44 - - 1.38629 1.38629 1.38629 1.38629 0.03376 4.09845 4.09845 1.46634 0.26236 1.09861 0.40547 45 0.12380 3.52833 2.89740 3.44436 45 - - 1.38629 1.38629 1.38629 1.38629 0.01702 4.08172 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:52:07 2012 NSEQ 2 EFFN 2.000000 CKSUM 821444567 STATS LOCAL MSV -7.5104 0.72807 STATS LOCAL VITERBI -8.1263 0.72807 STATS LOCAL FORWARD -3.3114 0.72807 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18728 1.52600 1.42796 1.43654 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:51:30 2012 NSEQ 2 EFFN 2.000000 CKSUM 903928538 STATS LOCAL MSV -7.4717 0.72804 STATS LOCAL VITERBI -8.1980 0.72804 STATS LOCAL FORWARD -3.3187 0.72804 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14072 1.46658 1.49206 1.49259 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:51:12 2012 NSEQ 2 EFFN 2.000000 CKSUM 1408254241 STATS LOCAL MSV -7.5052 0.72856 STATS LOCAL VITERBI -8.1127 0.72856 STATS LOCAL FORWARD -3.1802 0.72856 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14389 1.51633 1.63368 1.32165 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:52:18 2012 NSEQ 4 EFFN 3.261719 CKSUM 2899848815 STATS LOCAL MSV -7.9231 0.71933 STATS LOCAL VITERBI -7.6755 0.71933 STATS LOCAL FORWARD -4.1669 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27494 1.53557 1.37728 1.37453 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 0.00000 * 1 3.41037 0.13295 3.46079 2.81242 1 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 2 3.06875 2.58250 3.11766 0.18191 2 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 3 0.14453 3.36055 2.78910 3.26035 3 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 4 3.06875 2.58250 3.11766 0.18191 4 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 5 2.93372 3.56771 0.11938 3.47031 5 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 6 0.14453 3.36055 2.78910 3.26035 6 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 7 3.06875 2.58250 3.11766 0.18191 7 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 8 3.41037 0.13295 3.46079 2.81242 8 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 9 3.06875 2.58250 3.11766 0.18191 9 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 10 2.93372 3.56771 0.11938 3.47031 10 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 11 0.14453 3.36055 2.78910 3.26035 11 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 12 0.14453 3.36055 2.78910 3.26035 12 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 13 2.93372 3.56771 0.11938 3.47031 13 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 14 3.06875 2.58250 3.11766 0.18191 14 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 15 3.41037 0.13295 3.46079 2.81242 15 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 16 0.14453 3.36055 2.78910 3.26035 16 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 17 2.93372 3.56771 0.11938 3.47031 17 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 18 2.93372 3.56771 0.11938 3.47031 18 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 19 3.06875 2.58250 3.11766 0.18191 19 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 20 2.93372 3.56771 0.11938 3.47031 20 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 21 2.93372 3.56771 0.11938 3.47031 21 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 22 2.93372 3.56771 0.11938 3.47031 22 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 23 0.14453 3.36055 2.78910 3.26035 23 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 24 3.06875 2.58250 3.11766 0.18191 24 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 25 3.06875 2.58250 3.11766 0.18191 25 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 26 0.14453 3.36055 2.78910 3.26035 26 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 27 3.41037 0.13295 3.46079 2.81242 27 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 28 3.41037 0.13295 3.46079 2.81242 28 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 29 3.41037 0.13295 3.46079 2.81242 29 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 30 2.93372 3.56771 0.11938 3.47031 30 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 31 3.41037 0.13295 3.46079 2.81242 31 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 32 3.06875 2.58250 3.11766 0.18191 32 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 33 2.93372 3.56771 0.11938 3.47031 33 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 34 0.14453 3.36055 2.78910 3.26035 34 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 35 0.14453 3.36055 2.78910 3.26035 35 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 36 3.41037 0.13295 3.46079 2.81242 36 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 37 3.06875 2.58250 3.11766 0.18191 37 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 38 3.06875 2.58250 3.11766 0.18191 38 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 39 0.14453 3.36055 2.78910 3.26035 39 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 40 0.14453 3.36055 2.78910 3.26035 40 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 41 2.93372 3.56771 0.11938 3.47031 41 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 42 3.41037 0.13295 3.46079 2.81242 42 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 43 0.14453 3.36055 2.78910 3.26035 43 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 44 3.06875 2.58250 3.11766 0.18191 44 - - 1.38629 1.38629 1.38629 1.38629 0.03731 4.00035 4.00035 1.46634 0.26236 1.09861 0.40547 45 0.14453 3.36055 2.78910 3.26035 45 - - 1.38629 1.38629 1.38629 1.38629 0.01883 3.98187 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:50:41 2012 NSEQ 4 EFFN 3.246094 CKSUM 3720395925 STATS LOCAL MSV -7.9190 0.71932 STATS LOCAL VITERBI -7.5891 0.71932 STATS LOCAL FORWARD -4.0230 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16374 1.39489 1.52365 1.50547 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 0.00000 * 1 3.06361 2.57923 3.11272 0.18276 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 2 3.06361 2.57923 3.11272 0.18276 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 3 0.14522 3.35543 2.78576 3.25475 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 4 0.14522 3.35543 2.78576 3.25475 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 5 2.93012 3.56249 0.11996 3.46456 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 6 0.14522 3.35543 2.78576 3.25475 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 7 3.40447 0.13368 3.45513 2.80810 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 8 3.40447 0.13368 3.45513 2.80810 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 9 3.06361 2.57923 3.11272 0.18276 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 10 3.40447 0.13368 3.45513 2.80810 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 11 0.14522 3.35543 2.78576 3.25475 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 12 0.14522 3.35543 2.78576 3.25475 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 13 0.14522 3.35543 2.78576 3.25475 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 14 3.06361 2.57923 3.11272 0.18276 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 15 3.40447 0.13368 3.45513 2.80810 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 16 0.14522 3.35543 2.78576 3.25475 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 17 2.93012 3.56249 0.11996 3.46456 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 18 2.93012 3.56249 0.11996 3.46456 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 19 3.06361 2.57923 3.11272 0.18276 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 20 2.93012 3.56249 0.11996 3.46456 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 21 2.93012 3.56249 0.11996 3.46456 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 22 2.93012 3.56249 0.11996 3.46456 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 23 0.14522 3.35543 2.78576 3.25475 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 24 3.40447 0.13368 3.45513 2.80810 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 25 3.06361 2.57923 3.11272 0.18276 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 26 0.14522 3.35543 2.78576 3.25475 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 27 3.40447 0.13368 3.45513 2.80810 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 28 3.40447 0.13368 3.45513 2.80810 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 29 3.40447 0.13368 3.45513 2.80810 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 30 2.93012 3.56249 0.11996 3.46456 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 31 3.40447 0.13368 3.45513 2.80810 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 32 3.06361 2.57923 3.11272 0.18276 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 33 2.93012 3.56249 0.11996 3.46456 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 34 0.14522 3.35543 2.78576 3.25475 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 35 0.14522 3.35543 2.78576 3.25475 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 36 3.40447 0.13368 3.45513 2.80810 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 37 3.06361 2.57923 3.11272 0.18276 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 38 3.06361 2.57923 3.11272 0.18276 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 39 0.14522 3.35543 2.78576 3.25475 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 40 0.14522 3.35543 2.78576 3.25475 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 41 2.93012 3.56249 0.11996 3.46456 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 42 3.40447 0.13368 3.45513 2.80810 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 43 0.14522 3.35543 2.78576 3.25475 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 44 3.06361 2.57923 3.11272 0.18276 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99748 3.99748 1.46634 0.26236 1.09861 0.40547 45 0.14522 3.35543 2.78576 3.25475 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97895 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:51:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 2736182793 STATS LOCAL MSV -7.4107 0.72852 STATS LOCAL VITERBI -8.1798 0.72852 STATS LOCAL FORWARD -3.3656 0.72852 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14460 1.39311 1.71663 1.37170 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:51:43 2012 NSEQ 4 EFFN 3.238281 CKSUM 4133877247 STATS LOCAL MSV -8.0819 0.71932 STATS LOCAL VITERBI -7.7210 0.71932 STATS LOCAL FORWARD -3.9403 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.01602 1.26778 1.79130 1.66195 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 * 1 0.14557 3.35286 2.78409 3.25194 1 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 2 3.40150 0.13404 3.45229 2.80593 2 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 3 0.14557 3.35286 2.78409 3.25194 3 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 4 2.92831 3.55987 0.12026 3.46167 4 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 5 3.40150 0.13404 3.45229 2.80593 5 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 6 0.14557 3.35286 2.78409 3.25194 6 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 7 3.40150 0.13404 3.45229 2.80593 7 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 8 3.40150 0.13404 3.45229 2.80593 8 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 9 3.06103 2.57758 3.11024 0.18319 9 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 10 3.40150 0.13404 3.45229 2.80593 10 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 11 0.14557 3.35286 2.78409 3.25194 11 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 12 0.14557 3.35286 2.78409 3.25194 12 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 13 0.14557 3.35286 2.78409 3.25194 13 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 14 3.06103 2.57758 3.11024 0.18319 14 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 15 3.40150 0.13404 3.45229 2.80593 15 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 16 0.14557 3.35286 2.78409 3.25194 16 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 17 3.06103 2.57758 3.11024 0.18319 17 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 18 0.14557 3.35286 2.78409 3.25194 18 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 19 3.40150 0.13404 3.45229 2.80593 19 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 20 0.14557 3.35286 2.78409 3.25194 20 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 21 2.92831 3.55987 0.12026 3.46167 21 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 22 2.92831 3.55987 0.12026 3.46167 22 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 23 0.14557 3.35286 2.78409 3.25194 23 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 24 0.14557 3.35286 2.78409 3.25194 24 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 25 3.06103 2.57758 3.11024 0.18319 25 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 26 0.14557 3.35286 2.78409 3.25194 26 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 27 3.40150 0.13404 3.45229 2.80593 27 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 28 3.40150 0.13404 3.45229 2.80593 28 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 29 3.40150 0.13404 3.45229 2.80593 29 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 30 2.92831 3.55987 0.12026 3.46167 30 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 31 3.40150 0.13404 3.45229 2.80593 31 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 32 3.06103 2.57758 3.11024 0.18319 32 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 33 2.92831 3.55987 0.12026 3.46167 33 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 34 0.14557 3.35286 2.78409 3.25194 34 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 35 0.14557 3.35286 2.78409 3.25194 35 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 36 3.40150 0.13404 3.45229 2.80593 36 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 37 3.06103 2.57758 3.11024 0.18319 37 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 38 3.06103 2.57758 3.11024 0.18319 38 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 39 0.14557 3.35286 2.78409 3.25194 39 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 40 0.14557 3.35286 2.78409 3.25194 40 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 41 2.92831 3.55987 0.12026 3.46167 41 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 42 3.40150 0.13404 3.45229 2.80593 42 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 43 0.14557 3.35286 2.78409 3.25194 43 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 44 3.06103 2.57758 3.11024 0.18319 44 - - 1.38629 1.38629 1.38629 1.38629 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547 45 0.14557 3.35286 2.78409 3.25194 45 - - 1.38629 1.38629 1.38629 1.38629 0.01891 3.97749 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:51:00 2012 NSEQ 13 EFFN 3.665771 CKSUM 1687158218 STATS LOCAL MSV -7.7994 0.71931 STATS LOCAL VITERBI -7.5483 0.71931 STATS LOCAL FORWARD -4.1612 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14636 1.60969 1.61574 1.26049 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 0.00000 * 1 3.19466 2.66244 3.23871 0.16249 1 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 2 3.55228 0.11685 3.59653 2.91498 2 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 3 3.19466 2.66244 3.23871 0.16249 3 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 4 3.19466 2.66244 3.23871 0.16249 4 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 5 0.12892 3.48407 2.86897 3.39575 5 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 6 0.12892 3.48407 2.86897 3.39575 6 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 7 3.55228 0.11685 3.59653 2.91498 7 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 8 3.55228 0.11685 3.59653 2.91498 8 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 9 3.19466 2.66244 3.23871 0.16249 9 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 10 3.19466 2.66244 3.23871 0.16249 10 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 11 0.12892 3.48407 2.86897 3.39575 11 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 12 3.01863 3.69200 0.10636 3.60774 12 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 13 0.12892 3.48407 2.86897 3.39575 13 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 14 3.19466 2.66244 3.23871 0.16249 14 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 15 3.19466 2.66244 3.23871 0.16249 15 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 16 0.12892 3.48407 2.86897 3.39575 16 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 17 3.01863 3.69200 0.10636 3.60774 17 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 18 3.01863 3.69200 0.10636 3.60774 18 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 19 3.19466 2.66244 3.23871 0.16249 19 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 20 0.12892 3.48407 2.86897 3.39575 20 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 21 3.01863 3.69200 0.10636 3.60774 21 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 22 3.01863 3.69200 0.10636 3.60774 22 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 23 3.01863 3.69200 0.10636 3.60774 23 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 24 0.12892 3.48407 2.86897 3.39575 24 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 25 3.19466 2.66244 3.23871 0.16249 25 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 26 0.12892 3.48407 2.86897 3.39575 26 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 27 3.55228 0.11685 3.59653 2.91498 27 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 28 3.55228 0.11685 3.59653 2.91498 28 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 29 2.50281 0.69631 2.57448 1.06848 29 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 30 2.07539 3.16927 0.24195 3.05001 30 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 31 3.55228 0.11685 3.59653 2.91498 31 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 32 3.19466 2.66244 3.23871 0.16249 32 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 33 0.12892 3.48407 2.86897 3.39575 33 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 34 0.12892 3.48407 2.86897 3.39575 34 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 35 0.12892 3.48407 2.86897 3.39575 35 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 36 3.55228 0.11685 3.59653 2.91498 36 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 37 3.19466 2.66244 3.23871 0.16249 37 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 38 3.19466 2.66244 3.23871 0.16249 38 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 39 0.12892 3.48407 2.86897 3.39575 39 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 40 0.12892 3.48407 2.86897 3.39575 40 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 41 3.01863 3.69200 0.10636 3.60774 41 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 42 2.51087 0.67639 2.58247 1.09432 42 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 43 0.12892 3.48407 2.86897 3.39575 43 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 44 3.19466 2.66244 3.23871 0.16249 44 - - 1.38629 1.38629 1.38629 1.38629 0.03469 4.07172 4.07172 1.46634 0.26236 1.09861 0.40547 45 0.12892 3.48407 2.86897 3.39575 45 - - 1.38629 1.38629 1.38629 1.38629 0.01750 4.05452 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_thirtytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:50:50 2012 NSEQ 11 EFFN 3.563721 CKSUM 3433264437 STATS LOCAL MSV -7.6236 0.71933 STATS LOCAL VITERBI -7.7838 0.71933 STATS LOCAL FORWARD -4.0505 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11520 1.33630 1.60008 1.57284 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 0.00000 * 1 0.41521 2.55555 2.39198 1.76783 1 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 2 2.49900 0.66671 2.57079 1.11486 2 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 3 3.16410 2.64307 3.20934 0.16697 3 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 4 2.99857 3.66245 0.10931 3.57500 4 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 5 2.99857 3.66245 0.10931 3.57500 5 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 6 0.13248 3.45442 2.84988 3.36320 6 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 7 3.51834 0.12049 3.56411 2.89064 7 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 8 3.51834 0.12049 3.56411 2.89064 8 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 9 3.16410 2.64307 3.20934 0.16697 9 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 10 3.51834 0.12049 3.56411 2.89064 10 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 11 0.13248 3.45442 2.84988 3.36320 11 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 12 0.13248 3.45442 2.84988 3.36320 12 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 13 0.13248 3.45442 2.84988 3.36320 13 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 14 3.16410 2.64307 3.20934 0.16697 14 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 15 3.51834 0.12049 3.56411 2.89064 15 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 16 0.13248 3.45442 2.84988 3.36320 16 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 17 0.13248 3.45442 2.84988 3.36320 17 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 18 2.99857 3.66245 0.10931 3.57500 18 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 19 3.51834 0.12049 3.56411 2.89064 19 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 20 0.13248 3.45442 2.84988 3.36320 20 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 21 0.13248 3.45442 2.84988 3.36320 21 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 22 2.99857 3.66245 0.10931 3.57500 22 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 23 2.99857 3.66245 0.10931 3.57500 23 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 24 2.51413 1.25337 2.58307 0.58343 24 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 25 3.16410 2.64307 3.20934 0.16697 25 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 26 0.13248 3.45442 2.84988 3.36320 26 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 27 3.51834 0.12049 3.56411 2.89064 27 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 28 3.51834 0.12049 3.56411 2.89064 28 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 29 3.51834 0.12049 3.56411 2.89064 29 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 30 2.99857 3.66245 0.10931 3.57500 30 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 31 3.51834 0.12049 3.56411 2.89064 31 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 32 3.16410 2.64307 3.20934 0.16697 32 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 33 2.99857 3.66245 0.10931 3.57500 33 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 34 0.13248 3.45442 2.84988 3.36320 34 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 35 0.13248 3.45442 2.84988 3.36320 35 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 36 3.51834 0.12049 3.56411 2.89064 36 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 37 3.16410 2.64307 3.20934 0.16697 37 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 38 3.16410 2.64307 3.20934 0.16697 38 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 39 0.13248 3.45442 2.84988 3.36320 39 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 40 0.13248 3.45442 2.84988 3.36320 40 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 41 2.99857 3.66245 0.10931 3.57500 41 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 42 3.51834 0.12049 3.56411 2.89064 42 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 43 0.13248 3.45442 2.84988 3.36320 43 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 44 3.16410 2.64307 3.20934 0.16697 44 - - 1.38629 1.38629 1.38629 1.38629 0.03532 4.05417 4.05417 1.46634 0.26236 1.09861 0.40547 45 0.13248 3.45442 2.84988 3.36320 45 - - 1.38629 1.38629 1.38629 1.38629 0.01781 4.03667 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:37:52 2012 NSEQ 10 EFFN 3.208008 CKSUM 2628807988 STATS LOCAL MSV -8.0042 0.71934 STATS LOCAL VITERBI -7.5753 0.71934 STATS LOCAL FORWARD -4.3292 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27666 1.46872 1.30815 1.51188 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 0.00000 * 1 2.92124 3.54964 0.12142 3.45039 1 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 2 2.92124 3.54964 0.12142 3.45039 2 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 3 3.05099 2.57118 3.10057 0.18486 3 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 4 3.05099 2.57118 3.10057 0.18486 4 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 5 2.92124 3.54964 0.12142 3.45039 5 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 6 0.14694 3.34284 2.77755 3.24098 6 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 7 3.38993 0.13548 3.44120 2.79746 7 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 8 3.38993 0.13548 3.44120 2.79746 8 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 9 3.05099 2.57118 3.10057 0.18486 9 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 10 3.38993 0.13548 3.44120 2.79746 10 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 11 2.92124 3.54964 0.12142 3.45039 11 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 12 0.14694 3.34284 2.77755 3.24098 12 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 13 0.14694 3.34284 2.77755 3.24098 13 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 14 3.05099 2.57118 3.10057 0.18486 14 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 15 3.38993 0.13548 3.44120 2.79746 15 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 16 0.14694 3.34284 2.77755 3.24098 16 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 17 2.92124 3.54964 0.12142 3.45039 17 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 18 2.92124 3.54964 0.12142 3.45039 18 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 19 3.05099 2.57118 3.10057 0.18486 19 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 20 0.14694 3.34284 2.77755 3.24098 20 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 21 2.92124 3.54964 0.12142 3.45039 21 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 22 2.92124 3.54964 0.12142 3.45039 22 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 23 2.92124 3.54964 0.12142 3.45039 23 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 24 0.14694 3.34284 2.77755 3.24098 24 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 25 3.05099 2.57118 3.10057 0.18486 25 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 26 0.14694 3.34284 2.77755 3.24098 26 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 27 3.38993 0.13548 3.44120 2.79746 27 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 28 3.38993 0.13548 3.44120 2.79746 28 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 29 3.38993 0.13548 3.44120 2.79746 29 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 30 2.92124 3.54964 0.12142 3.45039 30 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 31 3.38993 0.13548 3.44120 2.79746 31 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 32 3.05099 2.57118 3.10057 0.18486 32 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 33 2.92124 3.54964 0.12142 3.45039 33 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 34 0.14694 3.34284 2.77755 3.24098 34 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 35 0.14694 3.34284 2.77755 3.24098 35 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 36 3.38993 0.13548 3.44120 2.79746 36 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 37 3.05099 2.57118 3.10057 0.18486 37 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 38 3.05099 2.57118 3.10057 0.18486 38 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 39 0.14694 3.34284 2.77755 3.24098 39 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 40 0.14694 3.34284 2.77755 3.24098 40 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 41 2.92124 3.54964 0.12142 3.45039 41 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 42 3.38993 0.13548 3.44120 2.79746 42 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 43 0.14694 3.34284 2.77755 3.24098 43 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 44 3.05099 2.57118 3.10057 0.18486 44 - - 1.38629 1.38629 1.38629 1.38629 0.03768 3.99047 3.99047 1.46634 0.26236 1.09861 0.40547 45 0.14694 3.34284 2.77755 3.24098 45 - - 1.38629 1.38629 1.38629 1.38629 0.01902 3.97180 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twelve_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:40:28 2012 NSEQ 3 EFFN 3.000000 CKSUM 2950196185 STATS LOCAL MSV -8.0668 0.72027 STATS LOCAL VITERBI -7.7412 0.72027 STATS LOCAL FORWARD -4.2882 0.72027 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34060 1.39231 1.37928 1.43526 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twenty_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:05 2012 NSEQ 7 EFFN 3.407715 CKSUM 1320832072 STATS LOCAL MSV -7.1647 0.71932 STATS LOCAL VITERBI -7.6126 0.71932 STATS LOCAL FORWARD -4.1960 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20916 1.61576 1.43114 1.33266 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 0.00000 * 1 0.13840 3.40710 2.81933 3.31132 1 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 2 3.11579 2.61241 3.16290 0.17436 2 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 3 3.11579 2.61241 3.16290 0.17436 3 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 4 2.23817 2.20087 1.48347 0.58737 4 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 5 2.96616 3.61492 0.11423 3.52243 5 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 6 0.13840 3.40710 2.81933 3.31132 6 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 7 3.11579 2.61241 3.16290 0.17436 7 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 8 3.46401 0.12658 3.51215 2.85144 8 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 9 3.11579 2.61241 3.16290 0.17436 9 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 10 2.96616 3.61492 0.11423 3.52243 10 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 11 0.13840 3.40710 2.81933 3.31132 11 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 12 0.13840 3.40710 2.81933 3.31132 12 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 13 0.13840 3.40710 2.81933 3.31132 13 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 14 3.11579 2.61241 3.16290 0.17436 14 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 15 3.46401 0.12658 3.51215 2.85144 15 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 16 0.13840 3.40710 2.81933 3.31132 16 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 17 2.96616 3.61492 0.11423 3.52243 17 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 18 2.96616 3.61492 0.11423 3.52243 18 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 19 3.11579 2.61241 3.16290 0.17436 19 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 20 2.96616 3.61492 0.11423 3.52243 20 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 21 2.96616 3.61492 0.11423 3.52243 21 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 22 2.96616 3.61492 0.11423 3.52243 22 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 23 0.13840 3.40710 2.81933 3.31132 23 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 24 3.11579 2.61241 3.16290 0.17436 24 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 25 3.11579 2.61241 3.16290 0.17436 25 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 26 0.13840 3.40710 2.81933 3.31132 26 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 27 3.46401 0.12658 3.51215 2.85144 27 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 28 3.46401 0.12658 3.51215 2.85144 28 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 29 3.46401 0.12658 3.51215 2.85144 29 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 30 2.96616 3.61492 0.11423 3.52243 30 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 31 3.46401 0.12658 3.51215 2.85144 31 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 32 3.11579 2.61241 3.16290 0.17436 32 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 33 2.96616 3.61492 0.11423 3.52243 33 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 34 0.13840 3.40710 2.81933 3.31132 34 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 35 0.13840 3.40710 2.81933 3.31132 35 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 36 3.46401 0.12658 3.51215 2.85144 36 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 37 3.11579 2.61241 3.16290 0.17436 37 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 38 3.11579 2.61241 3.16290 0.17436 38 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 39 0.13840 3.40710 2.81933 3.31132 39 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 40 0.13840 3.40710 2.81933 3.31132 40 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 41 2.96616 3.61492 0.11423 3.52243 41 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 42 3.46401 0.12658 3.51215 2.85144 42 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 43 0.13840 3.40710 2.81933 3.31132 43 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 44 3.11579 2.61241 3.16290 0.17436 44 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02673 4.02673 1.46634 0.26236 1.09861 0.40547 45 0.13840 3.40710 2.81933 3.31132 45 - - 1.38629 1.38629 1.38629 1.38629 0.01832 4.00873 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:50:03 2012 NSEQ 4 EFFN 3.386719 CKSUM 1317092738 STATS LOCAL MSV -7.5849 0.71933 STATS LOCAL VITERBI -7.6421 0.71933 STATS LOCAL FORWARD -4.1909 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14008 1.45832 1.51760 1.47691 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 0.00000 * 1 0.97254 2.15089 2.16655 0.93923 1 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 2 3.45647 0.12746 3.50493 2.84597 2 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 3 3.10913 2.60819 3.15650 0.17540 3 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 4 3.10913 2.60819 3.15650 0.17540 4 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 5 2.96162 3.60830 0.11494 3.51511 5 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 6 2.96162 3.60830 0.11494 3.51511 6 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 7 3.10913 2.60819 3.15650 0.17540 7 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 8 3.45647 0.12746 3.50493 2.84597 8 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 9 3.10913 2.60819 3.15650 0.17540 9 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 10 3.45647 0.12746 3.50493 2.84597 10 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 11 0.13925 3.40055 2.81508 3.30414 11 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 12 0.13925 3.40055 2.81508 3.30414 12 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 13 0.13925 3.40055 2.81508 3.30414 13 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 14 3.10913 2.60819 3.15650 0.17540 14 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 15 3.45647 0.12746 3.50493 2.84597 15 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 16 0.13925 3.40055 2.81508 3.30414 16 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 17 2.96162 3.60830 0.11494 3.51511 17 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 18 2.96162 3.60830 0.11494 3.51511 18 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 19 3.10913 2.60819 3.15650 0.17540 19 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 20 0.13925 3.40055 2.81508 3.30414 20 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 21 2.96162 3.60830 0.11494 3.51511 21 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 22 2.96162 3.60830 0.11494 3.51511 22 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 23 0.13925 3.40055 2.81508 3.30414 23 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 24 0.13925 3.40055 2.81508 3.30414 24 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 25 0.13925 3.40055 2.81508 3.30414 25 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 26 0.13925 3.40055 2.81508 3.30414 26 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 27 3.45647 0.12746 3.50493 2.84597 27 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 28 3.45647 0.12746 3.50493 2.84597 28 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 29 3.45647 0.12746 3.50493 2.84597 29 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 30 2.96162 3.60830 0.11494 3.51511 30 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 31 3.45647 0.12746 3.50493 2.84597 31 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 32 3.10913 2.60819 3.15650 0.17540 32 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 33 2.96162 3.60830 0.11494 3.51511 33 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 34 0.13925 3.40055 2.81508 3.30414 34 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 35 0.13925 3.40055 2.81508 3.30414 35 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 36 3.45647 0.12746 3.50493 2.84597 36 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 37 3.10913 2.60819 3.15650 0.17540 37 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 38 3.10913 2.60819 3.15650 0.17540 38 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 39 0.13925 3.40055 2.81508 3.30414 39 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 40 0.13925 3.40055 2.81508 3.30414 40 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 41 2.96162 3.60830 0.11494 3.51511 41 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 42 3.45647 0.12746 3.50493 2.84597 42 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 43 0.13925 3.40055 2.81508 3.30414 43 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 44 3.10913 2.60819 3.15650 0.17540 44 - - 1.38629 1.38629 1.38629 1.38629 0.03646 4.02298 4.02298 1.46634 0.26236 1.09861 0.40547 45 0.13925 3.40055 2.81508 3.30414 45 - - 1.38629 1.38629 1.38629 1.38629 0.01839 4.00492 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:43:23 2012 NSEQ 2 EFFN 2.000000 CKSUM 3566021374 STATS LOCAL MSV -7.5111 0.72847 STATS LOCAL VITERBI -8.0506 0.72847 STATS LOCAL FORWARD -3.4783 0.72847 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18781 1.51856 1.56094 1.32371 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:43:12 2012 NSEQ 6 EFFN 3.249023 CKSUM 3895891952 STATS LOCAL MSV -7.9043 0.71932 STATS LOCAL VITERBI -7.7253 0.71932 STATS LOCAL FORWARD -3.9552 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.06243 1.32866 1.69363 1.58134 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 0.00000 * 1 0.14509 3.35639 2.78639 3.25580 1 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 2 3.40558 0.13354 3.45619 2.80891 2 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 3 3.06457 2.57984 3.11364 0.18260 3 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 4 2.93080 3.56347 0.11985 3.46564 4 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 5 0.14509 3.35639 2.78639 3.25580 5 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 6 0.14509 3.35639 2.78639 3.25580 6 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 7 3.06457 2.57984 3.11364 0.18260 7 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 8 3.40558 0.13354 3.45619 2.80891 8 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 9 3.06457 2.57984 3.11364 0.18260 9 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 10 3.40558 0.13354 3.45619 2.80891 10 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 11 0.14509 3.35639 2.78639 3.25580 11 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 12 0.14509 3.35639 2.78639 3.25580 12 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 13 0.14509 3.35639 2.78639 3.25580 13 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 14 3.06457 2.57984 3.11364 0.18260 14 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 15 3.40558 0.13354 3.45619 2.80891 15 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 16 0.14509 3.35639 2.78639 3.25580 16 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 17 2.93080 3.56347 0.11985 3.46564 17 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 18 2.93080 3.56347 0.11985 3.46564 18 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 19 3.40558 0.13354 3.45619 2.80891 19 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 20 0.14509 3.35639 2.78639 3.25580 20 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 21 0.14509 3.35639 2.78639 3.25580 21 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 22 2.93080 3.56347 0.11985 3.46564 22 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 23 0.14509 3.35639 2.78639 3.25580 23 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 24 3.40558 0.13354 3.45619 2.80891 24 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 25 3.06457 2.57984 3.11364 0.18260 25 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 26 0.14509 3.35639 2.78639 3.25580 26 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 27 3.40558 0.13354 3.45619 2.80891 27 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 28 3.40558 0.13354 3.45619 2.80891 28 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 29 3.40558 0.13354 3.45619 2.80891 29 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 30 2.93080 3.56347 0.11985 3.46564 30 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 31 3.40558 0.13354 3.45619 2.80891 31 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 32 3.06457 2.57984 3.11364 0.18260 32 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 33 2.93080 3.56347 0.11985 3.46564 33 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 34 0.14509 3.35639 2.78639 3.25580 34 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 35 0.14509 3.35639 2.78639 3.25580 35 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 36 3.40558 0.13354 3.45619 2.80891 36 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 37 3.06457 2.57984 3.11364 0.18260 37 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 38 3.06457 2.57984 3.11364 0.18260 38 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 39 0.14509 3.35639 2.78639 3.25580 39 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 40 0.14509 3.35639 2.78639 3.25580 40 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 41 2.93080 3.56347 0.11985 3.46564 41 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 42 3.40558 0.13354 3.45619 2.80891 42 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 43 0.14509 3.35639 2.78639 3.25580 43 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 44 3.06457 2.57984 3.11364 0.18260 44 - - 1.38629 1.38629 1.38629 1.38629 0.03739 3.99802 3.99802 1.46634 0.26236 1.09861 0.40547 45 0.14509 3.35639 2.78639 3.25580 45 - - 1.38629 1.38629 1.38629 1.38629 0.01887 3.97950 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:50:15 2012 NSEQ 2 EFFN 2.000000 CKSUM 959618205 STATS LOCAL MSV -7.5275 0.72803 STATS LOCAL VITERBI -8.1791 0.72803 STATS LOCAL FORWARD -3.5182 0.72803 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19191 1.40243 1.49512 1.48662 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:14 2012 NSEQ 4 EFFN 3.628906 CKSUM 1397389222 STATS LOCAL MSV -7.5313 0.71931 STATS LOCAL VITERBI -7.5260 0.71931 STATS LOCAL FORWARD -4.0511 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20588 1.55182 1.57438 1.26736 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 0.00000 * 1 3.18371 2.65550 3.22819 0.16408 1 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 2 2.45954 0.94809 2.53092 0.80417 2 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 3 3.18371 2.65550 3.22819 0.16408 3 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 4 3.18371 2.65550 3.22819 0.16408 4 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 5 3.01149 3.68146 0.10740 3.59606 5 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 6 0.13018 3.47348 2.86215 3.38411 6 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 7 3.18371 2.65550 3.22819 0.16408 7 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 8 3.54016 0.11814 3.58496 2.90630 8 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 9 3.18371 2.65550 3.22819 0.16408 9 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 10 2.10036 1.01279 0.96329 2.01931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 11 0.13018 3.47348 2.86215 3.38411 11 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 12 0.13018 3.47348 2.86215 3.38411 12 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 13 0.13018 3.47348 2.86215 3.38411 13 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 14 3.18371 2.65550 3.22819 0.16408 14 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 15 3.54016 0.11814 3.58496 2.90630 15 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 16 0.13018 3.47348 2.86215 3.38411 16 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 17 3.01149 3.68146 0.10740 3.59606 17 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 18 3.01149 3.68146 0.10740 3.59606 18 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 19 3.18371 2.65550 3.22819 0.16408 19 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 20 0.13018 3.47348 2.86215 3.38411 20 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 21 3.01149 3.68146 0.10740 3.59606 21 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 22 3.01149 3.68146 0.10740 3.59606 22 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 23 0.13018 3.47348 2.86215 3.38411 23 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 24 3.18371 2.65550 3.22819 0.16408 24 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 25 3.18371 2.65550 3.22819 0.16408 25 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 26 0.13018 3.47348 2.86215 3.38411 26 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 27 3.54016 0.11814 3.58496 2.90630 27 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 28 3.54016 0.11814 3.58496 2.90630 28 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 29 3.54016 0.11814 3.58496 2.90630 29 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 30 3.01149 3.68146 0.10740 3.59606 30 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 31 3.54016 0.11814 3.58496 2.90630 31 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 32 3.18371 2.65550 3.22819 0.16408 32 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 33 3.01149 3.68146 0.10740 3.59606 33 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 34 0.13018 3.47348 2.86215 3.38411 34 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 35 0.13018 3.47348 2.86215 3.38411 35 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 36 3.54016 0.11814 3.58496 2.90630 36 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 37 3.18371 2.65550 3.22819 0.16408 37 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 38 3.18371 2.65550 3.22819 0.16408 38 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 39 0.13018 3.47348 2.86215 3.38411 39 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 40 0.13018 3.47348 2.86215 3.38411 40 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 41 3.01149 3.68146 0.10740 3.59606 41 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 42 3.54016 0.11814 3.58496 2.90630 42 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 43 0.13018 3.47348 2.86215 3.38411 43 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 44 3.18371 2.65550 3.22819 0.16408 44 - - 1.38629 1.38629 1.38629 1.38629 0.03491 4.06541 4.06541 1.46634 0.26236 1.09861 0.40547 45 0.13018 3.47348 2.86215 3.38411 45 - - 1.38629 1.38629 1.38629 1.38629 0.01761 4.04811 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:49:49 2012 NSEQ 2 EFFN 2.000000 CKSUM 3747538114 STATS LOCAL MSV -7.3914 0.72783 STATS LOCAL VITERBI -8.1969 0.72783 STATS LOCAL FORWARD -3.5689 0.72783 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.24119 1.34702 1.43309 1.54940 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentysixa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:43:36 2012 NSEQ 2 EFFN 2.000000 CKSUM 2411904908 STATS LOCAL MSV -7.4041 0.72805 STATS LOCAL VITERBI -8.2219 0.72805 STATS LOCAL FORWARD -3.5707 0.72805 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29063 1.39752 1.43320 1.43067 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentysixb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:43:48 2012 NSEQ 8 EFFN 3.332031 CKSUM 2867775014 STATS LOCAL MSV -8.0283 0.71933 STATS LOCAL VITERBI -7.4674 0.71933 STATS LOCAL FORWARD -4.1993 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.19256 1.39099 1.41860 1.58146 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 0.00000 * 1 3.43655 0.12980 3.48587 2.83150 1 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 2 3.43655 0.12980 3.48587 2.83150 2 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 3 0.14150 3.38325 2.80387 3.28520 3 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 4 3.09163 2.59706 3.13967 0.17819 4 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 5 2.94961 3.59079 0.11683 3.49577 5 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 6 2.94961 3.59079 0.11683 3.49577 6 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 7 3.09163 2.59706 3.13967 0.17819 7 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 8 3.43655 0.12980 3.48587 2.83150 8 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 9 3.09163 2.59706 3.13967 0.17819 9 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 10 3.43655 0.12980 3.48587 2.83150 10 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 11 0.14150 3.38325 2.80387 3.28520 11 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 12 0.14150 3.38325 2.80387 3.28520 12 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 13 0.14150 3.38325 2.80387 3.28520 13 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 14 3.09163 2.59706 3.13967 0.17819 14 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 15 3.43655 0.12980 3.48587 2.83150 15 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 16 0.14150 3.38325 2.80387 3.28520 16 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 17 2.94961 3.59079 0.11683 3.49577 17 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 18 2.94961 3.59079 0.11683 3.49577 18 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 19 3.09163 2.59706 3.13967 0.17819 19 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 20 0.14150 3.38325 2.80387 3.28520 20 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 21 2.94961 3.59079 0.11683 3.49577 21 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 22 2.94961 3.59079 0.11683 3.49577 22 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 23 0.14150 3.38325 2.80387 3.28520 23 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 24 0.86115 2.51680 0.90816 2.37150 24 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 25 2.94961 3.59079 0.11683 3.49577 25 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 26 0.14150 3.38325 2.80387 3.28520 26 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 27 3.43655 0.12980 3.48587 2.83150 27 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 28 3.43655 0.12980 3.48587 2.83150 28 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 29 3.43655 0.12980 3.48587 2.83150 29 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 30 2.94961 3.59079 0.11683 3.49577 30 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 31 3.43655 0.12980 3.48587 2.83150 31 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 32 3.09163 2.59706 3.13967 0.17819 32 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 33 2.94961 3.59079 0.11683 3.49577 33 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 34 0.14150 3.38325 2.80387 3.28520 34 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 35 0.14150 3.38325 2.80387 3.28520 35 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 36 3.43655 0.12980 3.48587 2.83150 36 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 37 3.09163 2.59706 3.13967 0.17819 37 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 38 3.09163 2.59706 3.13967 0.17819 38 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 39 0.14150 3.38325 2.80387 3.28520 39 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 40 0.14150 3.38325 2.80387 3.28520 40 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 41 2.94961 3.59079 0.11683 3.49577 41 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 42 3.43655 0.12980 3.48587 2.83150 42 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 43 0.14150 3.38325 2.80387 3.28520 43 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 44 3.09163 2.59706 3.13967 0.17819 44 - - 1.38629 1.38629 1.38629 1.38629 0.03682 4.01314 4.01314 1.46634 0.26236 1.09861 0.40547 45 0.14150 3.38325 2.80387 3.28520 45 - - 1.38629 1.38629 1.38629 1.38629 0.01858 3.99490 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentysixc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:43:56 2012 NSEQ 2 EFFN 2.000000 CKSUM 3021357813 STATS LOCAL MSV -7.5196 0.72804 STATS LOCAL VITERBI -8.2284 0.72804 STATS LOCAL FORWARD -3.6517 0.72804 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14433 1.46472 1.49189 1.48955 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentysixd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:44:04 2012 NSEQ 2 EFFN 2.000000 CKSUM 2296427277 STATS LOCAL MSV -7.3838 0.72812 STATS LOCAL VITERBI -8.0939 0.72812 STATS LOCAL FORWARD -3.4603 0.72812 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14562 1.39986 1.56210 1.48878 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.23862 2.84929 2.43386 2.70756 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentythreea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:42 2012 NSEQ 8 EFFN 3.417969 CKSUM 2052812395 STATS LOCAL MSV -7.6651 0.71932 STATS LOCAL VITERBI -7.6410 0.71932 STATS LOCAL FORWARD -4.1247 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.05490 1.44788 1.72778 1.43118 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 0.00000 * 1 0.13799 3.41029 2.82139 3.31481 1 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 2 3.46768 0.12616 3.51566 2.85409 2 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 3 3.11902 2.61447 3.16601 0.17385 3 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 4 3.11902 2.61447 3.16601 0.17385 4 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 5 2.96836 3.61813 0.11389 3.52598 5 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 6 0.13799 3.41029 2.82139 3.31481 6 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 7 3.11902 2.61447 3.16601 0.17385 7 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 8 3.46768 0.12616 3.51566 2.85409 8 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 9 3.11902 2.61447 3.16601 0.17385 9 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 10 3.46768 0.12616 3.51566 2.85409 10 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 11 0.13799 3.41029 2.82139 3.31481 11 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 12 0.13799 3.41029 2.82139 3.31481 12 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 13 0.13799 3.41029 2.82139 3.31481 13 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 14 3.11902 2.61447 3.16601 0.17385 14 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 15 3.46768 0.12616 3.51566 2.85409 15 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 16 0.13799 3.41029 2.82139 3.31481 16 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 17 2.96836 3.61813 0.11389 3.52598 17 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 18 0.13799 3.41029 2.82139 3.31481 18 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 19 3.11902 2.61447 3.16601 0.17385 19 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 20 0.13799 3.41029 2.82139 3.31481 20 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 21 0.13799 3.41029 2.82139 3.31481 21 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 22 2.96836 3.61813 0.11389 3.52598 22 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 23 0.13799 3.41029 2.82139 3.31481 23 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 24 2.28022 1.71480 0.48040 2.31058 24 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 25 3.11902 2.61447 3.16601 0.17385 25 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 26 0.13799 3.41029 2.82139 3.31481 26 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 27 3.46768 0.12616 3.51566 2.85409 27 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 28 3.46768 0.12616 3.51566 2.85409 28 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 29 3.46768 0.12616 3.51566 2.85409 29 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 30 2.96836 3.61813 0.11389 3.52598 30 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 31 3.46768 0.12616 3.51566 2.85409 31 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 32 3.11902 2.61447 3.16601 0.17385 32 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 33 2.96836 3.61813 0.11389 3.52598 33 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 34 0.13799 3.41029 2.82139 3.31481 34 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 35 0.13799 3.41029 2.82139 3.31481 35 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 36 3.46768 0.12616 3.51566 2.85409 36 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 37 3.11902 2.61447 3.16601 0.17385 37 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 38 3.11902 2.61447 3.16601 0.17385 38 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 39 0.13799 3.41029 2.82139 3.31481 39 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 40 0.13799 3.41029 2.82139 3.31481 40 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 41 2.96836 3.61813 0.11389 3.52598 41 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 42 3.46768 0.12616 3.51566 2.85409 42 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 43 0.13799 3.41029 2.82139 3.31481 43 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 44 3.11902 2.61447 3.16601 0.17385 44 - - 1.38629 1.38629 1.38629 1.38629 0.03625 4.02856 4.02856 1.46634 0.26236 1.09861 0.40547 45 0.13799 3.41029 2.82139 3.31481 45 - - 1.38629 1.38629 1.38629 1.38629 0.01829 4.01059 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentythreeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:49 2012 NSEQ 2 EFFN 2.000000 CKSUM 3714360911 STATS LOCAL MSV -7.3220 0.72828 STATS LOCAL VITERBI -8.2000 0.72828 STATS LOCAL FORWARD -3.3881 0.72828 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.10174 1.34252 1.71585 1.48409 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentythreec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:58 2012 NSEQ 2 EFFN 2.000000 CKSUM 548036852 STATS LOCAL MSV -7.4166 0.72832 STATS LOCAL VITERBI -8.1528 0.72832 STATS LOCAL FORWARD -3.3308 0.72832 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14403 1.39730 1.63681 1.42877 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_twentytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:42:30 2012 NSEQ 3 EFFN 3.000000 CKSUM 2216831043 STATS LOCAL MSV -8.0377 0.72044 STATS LOCAL VITERBI -7.8223 0.72044 STATS LOCAL FORWARD -4.0104 0.72044 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28082 1.38789 1.52204 1.36915 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:37:40 2012 NSEQ 16 EFFN 3.214844 CKSUM 1763961939 STATS LOCAL MSV -8.1256 0.71931 STATS LOCAL VITERBI -7.7756 0.71931 STATS LOCAL FORWARD -4.2638 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27663 1.46874 1.30814 1.51192 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 0.00000 * 1 2.92285 3.55196 0.12115 3.45295 1 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 2 2.92285 3.55196 0.12115 3.45295 2 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 3 3.05326 2.57263 3.10276 0.18448 3 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 4 3.05326 2.57263 3.10276 0.18448 4 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 5 2.92285 3.55196 0.12115 3.45295 5 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 6 0.14663 3.34511 2.77903 3.24347 6 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 7 3.39256 0.13515 3.44371 2.79938 7 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 8 3.39256 0.13515 3.44371 2.79938 8 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 9 3.05326 2.57263 3.10276 0.18448 9 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 10 3.39256 0.13515 3.44371 2.79938 10 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 11 2.92285 3.55196 0.12115 3.45295 11 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 12 2.92285 3.55196 0.12115 3.45295 12 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 13 0.14663 3.34511 2.77903 3.24347 13 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 14 3.05326 2.57263 3.10276 0.18448 14 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 15 3.39256 0.13515 3.44371 2.79938 15 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 16 0.14663 3.34511 2.77903 3.24347 16 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 17 2.92285 3.55196 0.12115 3.45295 17 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 18 2.92285 3.55196 0.12115 3.45295 18 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 19 3.05326 2.57263 3.10276 0.18448 19 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 20 0.14663 3.34511 2.77903 3.24347 20 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 21 2.92285 3.55196 0.12115 3.45295 21 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 22 2.92285 3.55196 0.12115 3.45295 22 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 23 0.14663 3.34511 2.77903 3.24347 23 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 24 0.14663 3.34511 2.77903 3.24347 24 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 25 3.05326 2.57263 3.10276 0.18448 25 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 26 0.14663 3.34511 2.77903 3.24347 26 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 27 3.39256 0.13515 3.44371 2.79938 27 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 28 3.39256 0.13515 3.44371 2.79938 28 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 29 3.39256 0.13515 3.44371 2.79938 29 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 30 2.92285 3.55196 0.12115 3.45295 30 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 31 3.39256 0.13515 3.44371 2.79938 31 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 32 3.05326 2.57263 3.10276 0.18448 32 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 33 2.92285 3.55196 0.12115 3.45295 33 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 34 0.14663 3.34511 2.77903 3.24347 34 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 35 0.14663 3.34511 2.77903 3.24347 35 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 36 3.39256 0.13515 3.44371 2.79938 36 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 37 3.05326 2.57263 3.10276 0.18448 37 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 38 3.05326 2.57263 3.10276 0.18448 38 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 39 0.14663 3.34511 2.77903 3.24347 39 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 40 0.14663 3.34511 2.77903 3.24347 40 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 41 2.92285 3.55196 0.12115 3.45295 41 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 42 3.39256 0.13515 3.44371 2.79938 42 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 43 0.14663 3.34511 2.77903 3.24347 43 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 44 3.05326 2.57263 3.10276 0.18448 44 - - 1.38629 1.38629 1.38629 1.38629 0.03763 3.99173 3.99173 1.46634 0.26236 1.09861 0.40547 45 0.14663 3.34511 2.77903 3.24347 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97309 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:55:27 2012 NSEQ 3 EFFN 3.000000 CKSUM 986683763 STATS LOCAL MSV -7.8857 0.72021 STATS LOCAL VITERBI -7.8118 0.72021 STATS LOCAL FORWARD -4.2409 0.72021 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34327 1.26704 1.45137 1.50015 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerob_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:56:50 2012 NSEQ 8 EFFN 3.355469 CKSUM 269870853 STATS LOCAL MSV -7.9646 0.71932 STATS LOCAL VITERBI -7.7466 0.71932 STATS LOCAL FORWARD -4.2283 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.31364 1.25878 1.49917 1.49681 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 0.00000 * 1 3.09916 2.60185 3.14691 0.17699 1 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 2 3.44514 0.12878 3.49408 2.83774 2 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 3 3.09916 2.60185 3.14691 0.17699 3 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 4 3.09916 2.60185 3.14691 0.17699 4 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 5 2.95480 3.59834 0.11601 3.50411 5 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 6 0.14052 3.39070 2.80870 3.29336 6 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 7 3.44514 0.12878 3.49408 2.83774 7 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 8 3.44514 0.12878 3.49408 2.83774 8 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 9 3.09916 2.60185 3.14691 0.17699 9 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 10 3.44514 0.12878 3.49408 2.83774 10 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 11 0.14052 3.39070 2.80870 3.29336 11 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 12 0.86019 2.52068 0.90746 2.37550 12 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 13 0.14052 3.39070 2.80870 3.29336 13 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 14 3.09916 2.60185 3.14691 0.17699 14 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 15 3.44514 0.12878 3.49408 2.83774 15 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 16 0.14052 3.39070 2.80870 3.29336 16 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 17 2.95480 3.59834 0.11601 3.50411 17 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 18 2.95480 3.59834 0.11601 3.50411 18 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 19 3.44514 0.12878 3.49408 2.83774 19 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 20 2.95480 3.59834 0.11601 3.50411 20 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 21 2.95480 3.59834 0.11601 3.50411 21 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 22 2.95480 3.59834 0.11601 3.50411 22 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 23 0.14052 3.39070 2.80870 3.29336 23 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 24 3.44514 0.12878 3.49408 2.83774 24 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 25 3.09916 2.60185 3.14691 0.17699 25 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 26 0.14052 3.39070 2.80870 3.29336 26 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 27 3.44514 0.12878 3.49408 2.83774 27 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 28 3.44514 0.12878 3.49408 2.83774 28 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 29 3.44514 0.12878 3.49408 2.83774 29 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 30 2.95480 3.59834 0.11601 3.50411 30 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 31 3.44514 0.12878 3.49408 2.83774 31 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 32 3.09916 2.60185 3.14691 0.17699 32 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 33 2.95480 3.59834 0.11601 3.50411 33 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 34 0.14052 3.39070 2.80870 3.29336 34 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 35 0.14052 3.39070 2.80870 3.29336 35 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 36 3.44514 0.12878 3.49408 2.83774 36 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 37 3.09916 2.60185 3.14691 0.17699 37 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 38 3.09916 2.60185 3.14691 0.17699 38 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 39 0.14052 3.39070 2.80870 3.29336 39 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 40 0.14052 3.39070 2.80870 3.29336 40 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 41 2.95480 3.59834 0.11601 3.50411 41 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 42 3.44514 0.12878 3.49408 2.83774 42 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 43 0.14052 3.39070 2.80870 3.29336 43 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 44 3.09916 2.60185 3.14691 0.17699 44 - - 1.38629 1.38629 1.38629 1.38629 0.03666 4.01737 4.01737 1.46634 0.26236 1.09861 0.40547 45 0.14052 3.39070 2.80870 3.29336 45 - - 1.38629 1.38629 1.38629 1.38629 0.01850 3.99920 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:56:56 2012 NSEQ 6 EFFN 3.500977 CKSUM 3586589863 STATS LOCAL MSV -7.4572 0.71933 STATS LOCAL VITERBI -7.4798 0.71933 STATS LOCAL FORWARD -4.1199 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29655 1.31476 1.52744 1.42338 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 0.00000 * 1 3.14491 2.63090 3.19089 0.16986 1 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 2 3.49685 0.12286 3.54356 2.87517 2 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 3 3.14491 2.63090 3.19089 0.16986 3 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 4 3.14491 2.63090 3.19089 0.16986 4 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 5 2.98580 3.64368 0.11122 3.55423 5 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 6 0.13479 3.43568 2.83780 3.34265 6 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 7 3.49685 0.12286 3.54356 2.87517 7 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 8 3.49685 0.12286 3.54356 2.87517 8 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 9 3.14491 2.63090 3.19089 0.16986 9 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 10 3.49685 0.12286 3.54356 2.87517 10 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 11 0.13479 3.43568 2.83780 3.34265 11 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 12 0.13479 3.43568 2.83780 3.34265 12 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 13 0.13479 3.43568 2.83780 3.34265 13 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 14 3.14491 2.63090 3.19089 0.16986 14 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 15 3.49685 0.12286 3.54356 2.87517 15 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 16 0.86165 2.54472 0.89564 2.40026 16 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 17 2.98580 3.64368 0.11122 3.55423 17 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 18 2.98580 3.64368 0.11122 3.55423 18 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 19 3.14491 2.63090 3.19089 0.16986 19 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 20 2.98580 3.64368 0.11122 3.55423 20 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 21 1.35943 2.69136 0.51522 2.55064 21 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 22 2.98580 3.64368 0.11122 3.55423 22 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 23 0.13479 3.43568 2.83780 3.34265 23 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 24 3.49685 0.12286 3.54356 2.87517 24 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 25 3.14491 2.63090 3.19089 0.16986 25 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 26 0.13479 3.43568 2.83780 3.34265 26 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 27 3.49685 0.12286 3.54356 2.87517 27 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 28 3.49685 0.12286 3.54356 2.87517 28 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 29 3.49685 0.12286 3.54356 2.87517 29 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 30 2.98580 3.64368 0.11122 3.55423 30 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 31 3.49685 0.12286 3.54356 2.87517 31 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 32 3.14491 2.63090 3.19089 0.16986 32 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 33 2.98580 3.64368 0.11122 3.55423 33 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 34 0.13479 3.43568 2.83780 3.34265 34 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 35 0.13479 3.43568 2.83780 3.34265 35 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 36 3.49685 0.12286 3.54356 2.87517 36 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 37 3.14491 2.63090 3.19089 0.16986 37 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 38 3.14491 2.63090 3.19089 0.16986 38 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 39 0.13479 3.43568 2.83780 3.34265 39 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 40 0.13479 3.43568 2.83780 3.34265 40 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 41 2.98580 3.64368 0.11122 3.55423 41 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 42 3.49685 0.12286 3.54356 2.87517 42 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 43 0.13479 3.43568 2.83780 3.34265 43 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 44 3.14491 2.63090 3.19089 0.16986 44 - - 1.38629 1.38629 1.38629 1.38629 0.03571 4.04322 4.04322 1.46634 0.26236 1.09861 0.40547 45 0.13479 3.43568 2.83780 3.34265 45 - - 1.38629 1.38629 1.38629 1.38629 0.01802 4.02553 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerod_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:04 2012 NSEQ 6 EFFN 3.547852 CKSUM 1641302506 STATS LOCAL MSV -7.4901 0.71932 STATS LOCAL VITERBI -7.5740 0.71932 STATS LOCAL FORWARD -4.1513 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21054 1.48458 1.60511 1.29282 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 0.00000 * 1 3.15928 2.64001 3.20470 0.16769 1 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 2 2.54860 1.35050 2.61638 0.52826 2 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 3 3.15928 2.64001 3.20470 0.16769 3 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 4 3.15928 2.64001 3.20470 0.16769 4 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 5 2.99538 3.65775 0.10978 3.56980 5 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 6 0.13306 3.44972 2.84685 3.35804 6 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 7 2.44565 0.95706 2.51719 0.80157 7 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 8 3.51295 0.12108 3.55896 2.88677 8 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 9 3.15928 2.64001 3.20470 0.16769 9 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 10 3.51295 0.12108 3.55896 2.88677 10 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 11 0.13306 3.44972 2.84685 3.35804 11 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 12 0.13306 3.44972 2.84685 3.35804 12 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 13 0.13306 3.44972 2.84685 3.35804 13 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 14 3.15928 2.64001 3.20470 0.16769 14 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 15 3.51295 0.12108 3.55896 2.88677 15 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 16 0.13306 3.44972 2.84685 3.35804 16 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 17 2.99538 3.65775 0.10978 3.56980 17 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 18 2.99538 3.65775 0.10978 3.56980 18 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 19 3.15928 2.64001 3.20470 0.16769 19 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 20 0.13306 3.44972 2.84685 3.35804 20 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 21 2.99538 3.65775 0.10978 3.56980 21 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 22 2.99538 3.65775 0.10978 3.56980 22 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 23 0.13306 3.44972 2.84685 3.35804 23 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 24 3.15928 2.64001 3.20470 0.16769 24 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 25 3.15928 2.64001 3.20470 0.16769 25 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 26 0.13306 3.44972 2.84685 3.35804 26 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 27 3.51295 0.12108 3.55896 2.88677 27 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 28 3.51295 0.12108 3.55896 2.88677 28 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 29 3.51295 0.12108 3.55896 2.88677 29 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 30 2.99538 3.65775 0.10978 3.56980 30 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 31 3.51295 0.12108 3.55896 2.88677 31 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 32 3.15928 2.64001 3.20470 0.16769 32 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 33 2.99538 3.65775 0.10978 3.56980 33 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 34 0.13306 3.44972 2.84685 3.35804 34 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 35 0.13306 3.44972 2.84685 3.35804 35 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 36 3.51295 0.12108 3.55896 2.88677 36 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 37 3.15928 2.64001 3.20470 0.16769 37 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 38 3.15928 2.64001 3.20470 0.16769 38 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 39 0.13306 3.44972 2.84685 3.35804 39 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 40 0.13306 3.44972 2.84685 3.35804 40 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 41 2.99538 3.65775 0.10978 3.56980 41 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 42 3.51295 0.12108 3.55896 2.88677 42 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 43 0.13306 3.44972 2.84685 3.35804 43 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 44 3.15928 2.64001 3.20470 0.16769 44 - - 1.38629 1.38629 1.38629 1.38629 0.03542 4.05141 4.05141 1.46634 0.26236 1.09861 0.40547 45 0.13306 3.44972 2.84685 3.35804 45 - - 1.38629 1.38629 1.38629 1.38629 0.01786 4.03386 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroe_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:11 2012 NSEQ 11 EFFN 3.327393 CKSUM 1937023544 STATS LOCAL MSV -7.8984 0.71933 STATS LOCAL VITERBI -7.7054 0.71933 STATS LOCAL FORWARD -4.1462 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23054 1.32040 1.60203 1.42982 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 0.00000 * 1 3.09013 2.59611 3.13823 0.17843 1 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 2 3.43485 0.13000 3.48423 2.83026 2 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 3 3.09013 2.59611 3.13823 0.17843 3 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 4 3.09013 2.59611 3.13823 0.17843 4 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 5 2.94858 3.58928 0.11699 3.49411 5 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 6 0.14170 3.38177 2.80290 3.28358 6 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 7 3.43485 0.13000 3.48423 2.83026 7 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 8 3.43485 0.13000 3.48423 2.83026 8 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 9 3.09013 2.59611 3.13823 0.17843 9 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 10 3.43485 0.13000 3.48423 2.83026 10 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 11 0.14170 3.38177 2.80290 3.28358 11 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 12 0.31415 2.89866 1.88400 2.77239 12 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 13 0.14170 3.38177 2.80290 3.28358 13 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 14 3.09013 2.59611 3.13823 0.17843 14 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 15 3.43485 0.13000 3.48423 2.83026 15 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 16 0.14170 3.38177 2.80290 3.28358 16 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 17 2.94858 3.58928 0.11699 3.49411 17 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 18 2.94858 3.58928 0.11699 3.49411 18 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 19 3.09013 2.59611 3.13823 0.17843 19 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 20 0.14170 3.38177 2.80290 3.28358 20 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 21 2.94858 3.58928 0.11699 3.49411 21 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 22 2.94858 3.58928 0.11699 3.49411 22 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 23 0.14170 3.38177 2.80290 3.28358 23 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 24 3.43485 0.13000 3.48423 2.83026 24 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 25 3.09013 2.59611 3.13823 0.17843 25 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 26 0.14170 3.38177 2.80290 3.28358 26 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 27 3.43485 0.13000 3.48423 2.83026 27 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 28 3.43485 0.13000 3.48423 2.83026 28 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 29 3.43485 0.13000 3.48423 2.83026 29 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 30 2.94858 3.58928 0.11699 3.49411 30 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 31 3.43485 0.13000 3.48423 2.83026 31 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 32 3.09013 2.59611 3.13823 0.17843 32 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 33 2.94858 3.58928 0.11699 3.49411 33 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 34 0.14170 3.38177 2.80290 3.28358 34 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 35 0.14170 3.38177 2.80290 3.28358 35 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 36 3.43485 0.13000 3.48423 2.83026 36 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 37 3.09013 2.59611 3.13823 0.17843 37 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 38 3.09013 2.59611 3.13823 0.17843 38 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 39 0.14170 3.38177 2.80290 3.28358 39 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 40 0.14170 3.38177 2.80290 3.28358 40 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 41 2.94858 3.58928 0.11699 3.49411 41 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 42 3.43485 0.13000 3.48423 2.83026 42 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 43 0.14170 3.38177 2.80290 3.28358 43 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 44 3.09013 2.59611 3.13823 0.17843 44 - - 1.38629 1.38629 1.38629 1.38629 0.03685 4.01230 4.01230 1.46634 0.26236 1.09861 0.40547 45 0.14170 3.38177 2.80290 3.28358 45 - - 1.38629 1.38629 1.38629 1.38629 0.01860 3.99404 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerof_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:17 2012 NSEQ 38 EFFN 3.353760 CKSUM 635588712 STATS LOCAL MSV -7.9391 0.71931 STATS LOCAL VITERBI -7.6166 0.71931 STATS LOCAL FORWARD -4.1661 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22464 1.38383 1.60472 1.36817 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 0.00000 * 1 3.09861 2.60150 3.14638 0.17707 1 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 2 3.09861 2.60150 3.14638 0.17707 2 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 3 3.09861 2.60150 3.14638 0.17707 3 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 4 3.09861 2.60150 3.14638 0.17707 4 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 5 2.95442 3.59779 0.11607 3.50350 5 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 6 0.14059 3.39016 2.80835 3.29276 6 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 7 3.44451 0.12886 3.49349 2.83729 7 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 8 3.44451 0.12886 3.49349 2.83729 8 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 9 3.09861 2.60150 3.14638 0.17707 9 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 10 3.44451 0.12886 3.49349 2.83729 10 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 11 0.14059 3.39016 2.80835 3.29276 11 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 12 0.14059 3.39016 2.80835 3.29276 12 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 13 0.14059 3.39016 2.80835 3.29276 13 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 14 3.09861 2.60150 3.14638 0.17707 14 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 15 3.44451 0.12886 3.49349 2.83729 15 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 16 0.14059 3.39016 2.80835 3.29276 16 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 17 2.95442 3.59779 0.11607 3.50350 17 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 18 2.95442 3.59779 0.11607 3.50350 18 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 19 2.94878 2.25268 3.00201 0.23219 19 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 20 0.23441 3.08456 2.19041 2.96927 20 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 21 2.95442 3.59779 0.11607 3.50350 21 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 22 2.95442 3.59779 0.11607 3.50350 22 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 23 0.14059 3.39016 2.80835 3.29276 23 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 24 3.44451 0.12886 3.49349 2.83729 24 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 25 3.09861 2.60150 3.14638 0.17707 25 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 26 0.14059 3.39016 2.80835 3.29276 26 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 27 3.44451 0.12886 3.49349 2.83729 27 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 28 3.44451 0.12886 3.49349 2.83729 28 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 29 3.44451 0.12886 3.49349 2.83729 29 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 30 2.95442 3.59779 0.11607 3.50350 30 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 31 3.44451 0.12886 3.49349 2.83729 31 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 32 3.09861 2.60150 3.14638 0.17707 32 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 33 2.95442 3.59779 0.11607 3.50350 33 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 34 0.14059 3.39016 2.80835 3.29276 34 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 35 0.14059 3.39016 2.80835 3.29276 35 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 36 3.44451 0.12886 3.49349 2.83729 36 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 37 3.09861 2.60150 3.14638 0.17707 37 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 38 3.09861 2.60150 3.14638 0.17707 38 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 39 0.14059 3.39016 2.80835 3.29276 39 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 40 0.14059 3.39016 2.80835 3.29276 40 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 41 2.95442 3.59779 0.11607 3.50350 41 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 42 3.44451 0.12886 3.49349 2.83729 42 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 43 0.14059 3.39016 2.80835 3.29276 43 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 44 3.09861 2.60150 3.14638 0.17707 44 - - 1.38629 1.38629 1.38629 1.38629 0.03668 4.01706 4.01706 1.46634 0.26236 1.09861 0.40547 45 0.14059 3.39016 2.80835 3.29276 45 - - 1.38629 1.38629 1.38629 1.38629 0.01851 3.99889 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerog_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:26 2012 NSEQ 28 EFFN 3.298340 CKSUM 2124900853 STATS LOCAL MSV -7.9321 0.71933 STATS LOCAL VITERBI -7.6572 0.71933 STATS LOCAL FORWARD -4.1445 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22042 1.32762 1.60958 1.42788 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 0.00000 * 1 3.08072 2.59012 3.12917 0.17995 1 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 2 3.08072 2.59012 3.12917 0.17995 2 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 3 3.42409 0.13129 3.47393 2.82243 3 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 4 3.08072 2.59012 3.12917 0.17995 4 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 5 2.94206 3.57981 0.11803 3.48366 5 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 6 0.14293 3.37244 2.79684 3.27336 6 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 7 3.12257 0.20645 3.18132 2.29307 7 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 8 3.42409 0.13129 3.47393 2.82243 8 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 9 3.08072 2.59012 3.12917 0.17995 9 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 10 3.42409 0.13129 3.47393 2.82243 10 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 11 0.14293 3.37244 2.79684 3.27336 11 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 12 0.14293 3.37244 2.79684 3.27336 12 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 13 0.14293 3.37244 2.79684 3.27336 13 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 14 3.08072 2.59012 3.12917 0.17995 14 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 15 3.42409 0.13129 3.47393 2.82243 15 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 16 0.14293 3.37244 2.79684 3.27336 16 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 17 2.94206 3.57981 0.11803 3.48366 17 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 18 2.94206 3.57981 0.11803 3.48366 18 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 19 3.08072 2.59012 3.12917 0.17995 19 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 20 0.14293 3.37244 2.79684 3.27336 20 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 21 2.94206 3.57981 0.11803 3.48366 21 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 22 2.94206 3.57981 0.11803 3.48366 22 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 23 0.14293 3.37244 2.79684 3.27336 23 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 24 3.42409 0.13129 3.47393 2.82243 24 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 25 3.08072 2.59012 3.12917 0.17995 25 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 26 0.14293 3.37244 2.79684 3.27336 26 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 27 3.42409 0.13129 3.47393 2.82243 27 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 28 3.42409 0.13129 3.47393 2.82243 28 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 29 3.42409 0.13129 3.47393 2.82243 29 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 30 2.94206 3.57981 0.11803 3.48366 30 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 31 3.42409 0.13129 3.47393 2.82243 31 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 32 3.08072 2.59012 3.12917 0.17995 32 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 33 2.94206 3.57981 0.11803 3.48366 33 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 34 0.14293 3.37244 2.79684 3.27336 34 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 35 0.14293 3.37244 2.79684 3.27336 35 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 36 3.42409 0.13129 3.47393 2.82243 36 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 37 3.08072 2.59012 3.12917 0.17995 37 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 38 3.08072 2.59012 3.12917 0.17995 38 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 39 0.14293 3.37244 2.79684 3.27336 39 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 40 0.14293 3.37244 2.79684 3.27336 40 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 41 2.94206 3.57981 0.11803 3.48366 41 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 42 3.42409 0.13129 3.47393 2.82243 42 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 43 0.14293 3.37244 2.79684 3.27336 43 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 44 3.08072 2.59012 3.12917 0.17995 44 - - 1.38629 1.38629 1.38629 1.38629 0.03705 4.00703 4.00703 1.46634 0.26236 1.09861 0.40547 45 0.14293 3.37244 2.79684 3.27336 45 - - 1.38629 1.38629 1.38629 1.38629 0.01870 3.98868 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:33 2012 NSEQ 5 EFFN 3.393555 CKSUM 3877494468 STATS LOCAL MSV -7.4633 0.71933 STATS LOCAL VITERBI -7.6926 0.71933 STATS LOCAL FORWARD -4.1375 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21641 1.35390 1.60772 1.40596 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 0.00000 * 1 3.11130 2.60957 3.15859 0.17506 1 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 2 3.11130 2.60957 3.15859 0.17506 2 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 3 3.11130 2.60957 3.15859 0.17506 3 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 4 3.45893 0.12717 3.50729 2.84776 4 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 5 2.96311 3.61046 0.11471 3.51750 5 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 6 0.13897 3.40269 2.81647 3.30648 6 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 7 2.44572 0.73402 2.51808 1.04200 7 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 8 3.45893 0.12717 3.50729 2.84776 8 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 9 3.11130 2.60957 3.15859 0.17506 9 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 10 3.45893 0.12717 3.50729 2.84776 10 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 11 0.13897 3.40269 2.81647 3.30648 11 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 12 0.13897 3.40269 2.81647 3.30648 12 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 13 0.13897 3.40269 2.81647 3.30648 13 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 14 3.11130 2.60957 3.15859 0.17506 14 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 15 3.45893 0.12717 3.50729 2.84776 15 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 16 0.13897 3.40269 2.81647 3.30648 16 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 17 2.96311 3.61046 0.11471 3.51750 17 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 18 2.96311 3.61046 0.11471 3.51750 18 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 19 3.11130 2.60957 3.15859 0.17506 19 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 20 0.13897 3.40269 2.81647 3.30648 20 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 21 2.96311 3.61046 0.11471 3.51750 21 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 22 2.96311 3.61046 0.11471 3.51750 22 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 23 0.13897 3.40269 2.81647 3.30648 23 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 24 3.45893 0.12717 3.50729 2.84776 24 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 25 3.11130 2.60957 3.15859 0.17506 25 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 26 0.13897 3.40269 2.81647 3.30648 26 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 27 3.45893 0.12717 3.50729 2.84776 27 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 28 3.45893 0.12717 3.50729 2.84776 28 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 29 3.45893 0.12717 3.50729 2.84776 29 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 30 2.96311 3.61046 0.11471 3.51750 30 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 31 3.45893 0.12717 3.50729 2.84776 31 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 32 3.11130 2.60957 3.15859 0.17506 32 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 33 2.96311 3.61046 0.11471 3.51750 33 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 34 0.13897 3.40269 2.81647 3.30648 34 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 35 0.13897 3.40269 2.81647 3.30648 35 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 36 3.45893 0.12717 3.50729 2.84776 36 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 37 3.11130 2.60957 3.15859 0.17506 37 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 38 3.11130 2.60957 3.15859 0.17506 38 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 39 0.13897 3.40269 2.81647 3.30648 39 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 40 0.13897 3.40269 2.81647 3.30648 40 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 41 2.96311 3.61046 0.11471 3.51750 41 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 42 3.45893 0.12717 3.50729 2.84776 42 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 43 0.13897 3.40269 2.81647 3.30648 43 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 44 3.11130 2.60957 3.15859 0.17506 44 - - 1.38629 1.38629 1.38629 1.38629 0.03641 4.02420 4.02420 1.46634 0.26236 1.09861 0.40547 45 0.13897 3.40269 2.81647 3.30648 45 - - 1.38629 1.38629 1.38629 1.38629 0.01837 4.00616 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroi_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:40 2012 NSEQ 2 EFFN 2.000000 CKSUM 1358711406 STATS LOCAL MSV -7.2748 0.72894 STATS LOCAL VITERBI -8.1824 0.72894 STATS LOCAL FORWARD -3.3082 0.72894 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26783 1.39124 1.53757 1.36693 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.92825 2.28391 0.95698 2.13014 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:57:49 2012 NSEQ 2 EFFN 2.000000 CKSUM 3176606988 STATS LOCAL MSV -7.2841 0.72813 STATS LOCAL VITERBI -8.2393 0.72813 STATS LOCAL FORWARD -3.5132 0.72813 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.29204 1.34054 1.49917 1.42600 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerok_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:04 2012 NSEQ 9 EFFN 3.467285 CKSUM 4841333 STATS LOCAL MSV -7.5087 0.71933 STATS LOCAL VITERBI -7.5908 0.71933 STATS LOCAL FORWARD -4.1771 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20120 1.40481 1.55244 1.41873 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 0.00000 * 1 1.36818 2.68930 0.51199 2.54850 1 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 2 3.13447 2.62427 3.18086 0.17146 2 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 3 3.13447 2.62427 3.18086 0.17146 3 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 4 3.13447 2.62427 3.18086 0.17146 4 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 5 2.97880 3.63341 0.11228 3.54287 5 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 6 0.13607 3.42546 2.83120 3.33144 6 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 7 3.48511 0.12417 3.53234 2.86670 7 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 8 3.48511 0.12417 3.53234 2.86670 8 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 9 3.13447 2.62427 3.18086 0.17146 9 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 10 3.48511 0.12417 3.53234 2.86670 10 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 11 0.13607 3.42546 2.83120 3.33144 11 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 12 0.13607 3.42546 2.83120 3.33144 12 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 13 0.13607 3.42546 2.83120 3.33144 13 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 14 3.13447 2.62427 3.18086 0.17146 14 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 15 3.48511 0.12417 3.53234 2.86670 15 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 16 0.13607 3.42546 2.83120 3.33144 16 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 17 2.97880 3.63341 0.11228 3.54287 17 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 18 2.97880 3.63341 0.11228 3.54287 18 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 19 3.13447 2.62427 3.18086 0.17146 19 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 20 0.13607 3.42546 2.83120 3.33144 20 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 21 2.97880 3.63341 0.11228 3.54287 21 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 22 2.97880 3.63341 0.11228 3.54287 22 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 23 0.13607 3.42546 2.83120 3.33144 23 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 24 2.73151 0.39094 2.79970 1.62136 24 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 25 3.13447 2.62427 3.18086 0.17146 25 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 26 0.13607 3.42546 2.83120 3.33144 26 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 27 3.48511 0.12417 3.53234 2.86670 27 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 28 3.48511 0.12417 3.53234 2.86670 28 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 29 3.48511 0.12417 3.53234 2.86670 29 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 30 2.97880 3.63341 0.11228 3.54287 30 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 31 3.48511 0.12417 3.53234 2.86670 31 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 32 3.13447 2.62427 3.18086 0.17146 32 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 33 2.97880 3.63341 0.11228 3.54287 33 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 34 0.13607 3.42546 2.83120 3.33144 34 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 35 0.13607 3.42546 2.83120 3.33144 35 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 36 3.48511 0.12417 3.53234 2.86670 36 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 37 3.13447 2.62427 3.18086 0.17146 37 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 38 3.13447 2.62427 3.18086 0.17146 38 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 39 0.13607 3.42546 2.83120 3.33144 39 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 40 0.13607 3.42546 2.83120 3.33144 40 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 41 2.97880 3.63341 0.11228 3.54287 41 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 42 3.48511 0.12417 3.53234 2.86670 42 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 43 0.13607 3.42546 2.83120 3.33144 43 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 44 3.13447 2.62427 3.18086 0.17146 44 - - 1.38629 1.38629 1.38629 1.38629 0.03593 4.03730 4.03730 1.46634 0.26236 1.09861 0.40547 45 0.13607 3.42546 2.83120 3.33144 45 - - 1.38629 1.38629 1.38629 1.38629 0.01813 4.01949 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerol_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:14 2012 NSEQ 3 EFFN 3.000000 CKSUM 1380909000 STATS LOCAL MSV -7.8581 0.72040 STATS LOCAL VITERBI -7.7283 0.72040 STATS LOCAL FORWARD -4.0355 0.72040 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22456 1.32500 1.60288 1.43131 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.97980 2.52563 3.03204 0.19727 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerom_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:27 2012 NSEQ 2 EFFN 2.000000 CKSUM 2586996602 STATS LOCAL MSV -7.2336 0.72874 STATS LOCAL VITERBI -8.1284 0.72874 STATS LOCAL FORWARD -3.3153 0.72874 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23521 1.43456 1.49194 1.40214 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.15554 1.00938 2.23102 0.88601 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeron_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:34 2012 NSEQ 2 EFFN 2.000000 CKSUM 1275853522 STATS LOCAL MSV -7.3133 0.72871 STATS LOCAL VITERBI -8.2509 0.72871 STATS LOCAL FORWARD -3.4740 0.72871 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18757 1.37786 1.56010 1.45755 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.15554 1.00938 2.23102 0.88601 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.81865 0.23582 2.88868 2.35662 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:41 2012 NSEQ 3 EFFN 3.000000 CKSUM 3626745368 STATS LOCAL MSV -7.9548 0.72125 STATS LOCAL VITERBI -7.7562 0.72125 STATS LOCAL FORWARD -3.8171 0.72125 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.05917 1.45675 1.56990 1.55023 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.11048 0.71234 1.38751 1.97595 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.43440 0.61908 2.50724 1.22957 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 0.15719 3.27118 2.73043 3.16274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zerop_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:49 2012 NSEQ 3 EFFN 3.000000 CKSUM 1612814297 STATS LOCAL MSV -7.8690 0.72026 STATS LOCAL VITERBI -7.8240 0.72026 STATS LOCAL FORWARD -4.1287 0.72026 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28267 1.26653 1.52492 1.49943 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 0.15719 3.27118 2.73043 3.16274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.97980 2.52563 3.03204 0.19727 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 3.30705 0.14631 3.36166 2.73626 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Fungi_Ge_4_LSU_start_zeroq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Thu Feb 16 21:58:58 2012 NSEQ 4 EFFN 3.394531 CKSUM 115258169 STATS LOCAL MSV -7.4886 0.71933 STATS LOCAL VITERBI -7.6337 0.71933 STATS LOCAL FORWARD -4.1831 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21618 1.36167 1.60745 1.39833 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 0.00000 * 1 3.11161 2.60976 3.15888 0.17501 1 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 2 3.11161 2.60976 3.15888 0.17501 2 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 3 2.41818 0.95521 2.49012 0.81354 3 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 4 3.11161 2.60976 3.15888 0.17501 4 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 5 2.96332 3.61077 0.11467 3.51784 5 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 6 0.13893 3.40299 2.81667 3.30682 6 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 7 3.45928 0.12713 3.50762 2.84801 7 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 8 3.45928 0.12713 3.50762 2.84801 8 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 9 3.11161 2.60976 3.15888 0.17501 9 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 10 3.45928 0.12713 3.50762 2.84801 10 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 11 0.13893 3.40299 2.81667 3.30682 11 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 12 0.13893 3.40299 2.81667 3.30682 12 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 13 0.13893 3.40299 2.81667 3.30682 13 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 14 3.11161 2.60976 3.15888 0.17501 14 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 15 3.45928 0.12713 3.50762 2.84801 15 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 16 0.13893 3.40299 2.81667 3.30682 16 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 17 2.96332 3.61077 0.11467 3.51784 17 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 18 2.96332 3.61077 0.11467 3.51784 18 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 19 3.11161 2.60976 3.15888 0.17501 19 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 20 0.13893 3.40299 2.81667 3.30682 20 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 21 2.96332 3.61077 0.11467 3.51784 21 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 22 2.96332 3.61077 0.11467 3.51784 22 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 23 0.13893 3.40299 2.81667 3.30682 23 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 24 3.45928 0.12713 3.50762 2.84801 24 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 25 3.11161 2.60976 3.15888 0.17501 25 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 26 0.13893 3.40299 2.81667 3.30682 26 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 27 3.45928 0.12713 3.50762 2.84801 27 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 28 3.45928 0.12713 3.50762 2.84801 28 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 29 3.45928 0.12713 3.50762 2.84801 29 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 30 2.96332 3.61077 0.11467 3.51784 30 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 31 3.45928 0.12713 3.50762 2.84801 31 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 32 3.11161 2.60976 3.15888 0.17501 32 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 33 2.96332 3.61077 0.11467 3.51784 33 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 34 0.13893 3.40299 2.81667 3.30682 34 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 35 0.13893 3.40299 2.81667 3.30682 35 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 36 3.45928 0.12713 3.50762 2.84801 36 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 37 3.11161 2.60976 3.15888 0.17501 37 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 38 3.11161 2.60976 3.15888 0.17501 38 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 39 0.13893 3.40299 2.81667 3.30682 39 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 40 0.13893 3.40299 2.81667 3.30682 40 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 41 2.96332 3.61077 0.11467 3.51784 41 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 42 3.45928 0.12713 3.50762 2.84801 42 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 43 0.13893 3.40299 2.81667 3.30682 43 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 44 3.11161 2.60976 3.15888 0.17501 44 - - 1.38629 1.38629 1.38629 1.38629 0.03640 4.02437 4.02437 1.46634 0.26236 1.09861 0.40547 45 0.13893 3.40299 2.81667 3.30682 45 - - 1.38629 1.38629 1.38629 1.38629 0.01837 4.00634 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ca_1_SSU_end_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:56:29 2012 NSEQ 12 EFFN 3.178711 CKSUM 1984040130 STATS LOCAL MSV -8.0977 0.71931 STATS LOCAL VITERBI -7.7092 0.71931 STATS LOCAL FORWARD -4.0736 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33888 1.40002 1.24981 1.58616 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 0.00000 * 1 2.91430 3.53962 0.12257 3.43936 1 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 2 3.04119 2.56493 3.09115 0.18651 2 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 3 3.37862 0.13690 3.43035 2.78916 3 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 4 2.91430 3.53962 0.12257 3.43936 4 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 5 3.04119 2.56493 3.09115 0.18651 5 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 6 0.14829 3.33304 2.77114 3.23028 6 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 7 0.14829 3.33304 2.77114 3.23028 7 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 8 3.37862 0.13690 3.43035 2.78916 8 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 9 0.14829 3.33304 2.77114 3.23028 9 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 10 0.14829 3.33304 2.77114 3.23028 10 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 11 2.91430 3.53962 0.12257 3.43936 11 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 12 2.91430 3.53962 0.12257 3.43936 12 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 13 3.04119 2.56493 3.09115 0.18651 13 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 14 3.04119 2.56493 3.09115 0.18651 14 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 15 3.04119 2.56493 3.09115 0.18651 15 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 16 3.37862 0.13690 3.43035 2.78916 16 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 17 3.37862 0.13690 3.43035 2.78916 17 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 18 2.91430 3.53962 0.12257 3.43936 18 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 19 3.04119 2.56493 3.09115 0.18651 19 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 20 0.14829 3.33304 2.77114 3.23028 20 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 21 2.91430 3.53962 0.12257 3.43936 21 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 22 2.91430 3.53962 0.12257 3.43936 22 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 23 3.04119 2.56493 3.09115 0.18651 23 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 24 2.91430 3.53962 0.12257 3.43936 24 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 25 0.14829 3.33304 2.77114 3.23028 25 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 26 0.14829 3.33304 2.77114 3.23028 26 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 27 3.37862 0.13690 3.43035 2.78916 27 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 28 3.37862 0.13690 3.43035 2.78916 28 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 29 3.04119 2.56493 3.09115 0.18651 29 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 30 2.91430 3.53962 0.12257 3.43936 30 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 31 3.37862 0.13690 3.43035 2.78916 31 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 32 2.91430 3.53962 0.12257 3.43936 32 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 33 2.91430 3.53962 0.12257 3.43936 33 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 34 0.14829 3.33304 2.77114 3.23028 34 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 35 0.14829 3.33304 2.77114 3.23028 35 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 36 2.91430 3.53962 0.12257 3.43936 36 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 37 2.91430 3.53962 0.12257 3.43936 37 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 38 0.14829 3.33304 2.77114 3.23028 38 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 39 3.04119 2.56493 3.09115 0.18651 39 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 40 3.37862 0.13690 3.43035 2.78916 40 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 41 0.14829 3.33304 2.77114 3.23028 41 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 42 0.14829 3.33304 2.77114 3.23028 42 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 43 3.37862 0.13690 3.43035 2.78916 43 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 44 3.37862 0.13690 3.43035 2.78916 44 - - 1.38629 1.38629 1.38629 1.38629 0.03789 3.98503 3.98503 1.46634 0.26236 1.09861 0.40547 45 3.37862 0.13690 3.43035 2.78916 45 - - 1.38629 1.38629 1.38629 1.38629 0.01913 3.96627 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Cr_1_SSU_end_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 13:46:04 2012 NSEQ 11 EFFN 3.273682 CKSUM 279787087 STATS LOCAL MSV -7.9936 0.71933 STATS LOCAL VITERBI -7.6847 0.71933 STATS LOCAL FORWARD -4.0684 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33495 1.53740 1.25494 1.44056 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 0.00000 * 1 2.93646 3.57168 0.11893 3.47469 1 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 2 3.07267 2.58500 3.12143 0.18127 2 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 3 3.41487 0.13240 3.46510 2.81570 3 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 4 2.93646 3.57168 0.11893 3.47469 4 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 5 3.07267 2.58500 3.12143 0.18127 5 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 6 0.14400 3.36445 2.79164 3.26462 6 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 7 0.14400 3.36445 2.79164 3.26462 7 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 8 3.41487 0.13240 3.46510 2.81570 8 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 9 0.14400 3.36445 2.79164 3.26462 9 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 10 0.14400 3.36445 2.79164 3.26462 10 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 11 2.93646 3.57168 0.11893 3.47469 11 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 12 2.93646 3.57168 0.11893 3.47469 12 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 13 3.07267 2.58500 3.12143 0.18127 13 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 14 3.07267 2.58500 3.12143 0.18127 14 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 15 3.07267 2.58500 3.12143 0.18127 15 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 16 3.41487 0.13240 3.46510 2.81570 16 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 17 3.41487 0.13240 3.46510 2.81570 17 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 18 2.93646 3.57168 0.11893 3.47469 18 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 19 3.07267 2.58500 3.12143 0.18127 19 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 20 0.14400 3.36445 2.79164 3.26462 20 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 21 2.93646 3.57168 0.11893 3.47469 21 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 22 2.93646 3.57168 0.11893 3.47469 22 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 23 3.07267 2.58500 3.12143 0.18127 23 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 24 2.93646 3.57168 0.11893 3.47469 24 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 25 0.14400 3.36445 2.79164 3.26462 25 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 26 0.14400 3.36445 2.79164 3.26462 26 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 27 3.41487 0.13240 3.46510 2.81570 27 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 28 3.41487 0.13240 3.46510 2.81570 28 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 29 3.07267 2.58500 3.12143 0.18127 29 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 30 2.61388 2.50308 0.24033 2.83787 30 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 31 3.41487 0.13240 3.46510 2.81570 31 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 32 2.93646 3.57168 0.11893 3.47469 32 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 33 2.93646 3.57168 0.11893 3.47469 33 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 34 0.14400 3.36445 2.79164 3.26462 34 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 35 0.14400 3.36445 2.79164 3.26462 35 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 36 2.93646 3.57168 0.11893 3.47469 36 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 37 2.93646 3.57168 0.11893 3.47469 37 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 38 0.14400 3.36445 2.79164 3.26462 38 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 39 3.07267 2.58500 3.12143 0.18127 39 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 40 3.41487 0.13240 3.46510 2.81570 40 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 41 0.14400 3.36445 2.79164 3.26462 41 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 42 3.07267 2.58500 3.12143 0.18127 42 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 43 3.07267 2.58500 3.12143 0.18127 43 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 44 3.41487 0.13240 3.46510 2.81570 44 - - 1.38629 1.38629 1.38629 1.38629 0.03722 4.00254 4.00254 1.46634 0.26236 1.09861 0.40547 45 0.14400 3.36445 2.79164 3.26462 45 - - 1.38629 1.38629 1.38629 1.38629 0.01878 3.98410 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:03:03 2012 NSEQ 24 EFFN 3.196289 CKSUM 260009009 STATS LOCAL MSV -7.9745 0.71933 STATS LOCAL VITERBI -7.7116 0.71933 STATS LOCAL FORWARD -4.1567 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27161 1.63095 1.18853 1.51774 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 0.00000 * 1 0.14748 3.33893 2.77499 3.23671 1 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 2 2.91847 3.54565 0.12187 3.44599 2 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 3 3.04708 2.56869 3.09681 0.18552 3 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 4 3.38542 0.13604 3.43688 2.79415 4 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 5 2.91847 3.54565 0.12187 3.44599 5 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 6 3.04708 2.56869 3.09681 0.18552 6 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 7 0.14748 3.33893 2.77499 3.23671 7 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 8 0.14748 3.33893 2.77499 3.23671 8 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 9 3.38542 0.13604 3.43688 2.79415 9 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 10 0.14748 3.33893 2.77499 3.23671 10 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 11 0.14748 3.33893 2.77499 3.23671 11 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 12 2.91847 3.54565 0.12187 3.44599 12 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 13 2.91847 3.54565 0.12187 3.44599 13 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 14 3.04708 2.56869 3.09681 0.18552 14 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 15 3.04708 2.56869 3.09681 0.18552 15 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 16 3.04708 2.56869 3.09681 0.18552 16 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 17 3.38542 0.13604 3.43688 2.79415 17 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 18 3.38542 0.13604 3.43688 2.79415 18 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 19 2.91847 3.54565 0.12187 3.44599 19 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 20 3.04708 2.56869 3.09681 0.18552 20 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 21 0.14748 3.33893 2.77499 3.23671 21 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 22 2.91847 3.54565 0.12187 3.44599 22 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 23 2.91847 3.54565 0.12187 3.44599 23 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 24 3.04708 2.56869 3.09681 0.18552 24 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 25 2.91847 3.54565 0.12187 3.44599 25 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 26 0.14748 3.33893 2.77499 3.23671 26 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 27 0.14748 3.33893 2.77499 3.23671 27 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 28 3.38542 0.13604 3.43688 2.79415 28 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 29 3.38542 0.13604 3.43688 2.79415 29 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 30 3.04708 2.56869 3.09681 0.18552 30 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 31 2.91847 3.54565 0.12187 3.44599 31 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 32 3.38542 0.13604 3.43688 2.79415 32 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 33 2.91847 3.54565 0.12187 3.44599 33 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 34 2.91847 3.54565 0.12187 3.44599 34 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 35 0.14748 3.33893 2.77499 3.23671 35 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 36 0.14748 3.33893 2.77499 3.23671 36 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 37 2.91847 3.54565 0.12187 3.44599 37 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 38 2.91847 3.54565 0.12187 3.44599 38 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 39 0.14748 3.33893 2.77499 3.23671 39 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 40 3.04708 2.56869 3.09681 0.18552 40 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 41 3.38542 0.13604 3.43688 2.79415 41 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 42 0.14748 3.33893 2.77499 3.23671 42 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 43 3.04708 2.56869 3.09681 0.18552 43 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 44 0.14748 3.33893 2.77499 3.23671 44 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 45 2.91847 3.54565 0.12187 3.44599 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96959 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:02:20 2012 NSEQ 31 EFFN 3.227905 CKSUM 4193963486 STATS LOCAL MSV -8.0048 0.71932 STATS LOCAL VITERBI -7.6840 0.71932 STATS LOCAL FORWARD -4.1097 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27188 1.62648 1.24658 1.44567 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 0.00000 * 1 0.14603 3.34943 2.78185 3.24820 1 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 2 2.92590 3.55638 0.12065 3.45782 2 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 3 3.05760 2.57540 3.10693 0.18376 3 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 4 3.39755 0.13453 3.44850 2.80304 4 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 5 2.92590 3.55638 0.12065 3.45782 5 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 6 3.05760 2.57540 3.10693 0.18376 6 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 7 0.14603 3.34943 2.78185 3.24820 7 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 8 0.14603 3.34943 2.78185 3.24820 8 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 9 3.39755 0.13453 3.44850 2.80304 9 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 10 0.14603 3.34943 2.78185 3.24820 10 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 11 0.14603 3.34943 2.78185 3.24820 11 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 12 2.92590 3.55638 0.12065 3.45782 12 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 13 2.92590 3.55638 0.12065 3.45782 13 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 14 3.05760 2.57540 3.10693 0.18376 14 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 15 3.05760 2.57540 3.10693 0.18376 15 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 16 3.05760 2.57540 3.10693 0.18376 16 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 17 3.39755 0.13453 3.44850 2.80304 17 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 18 3.39755 0.13453 3.44850 2.80304 18 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 19 2.92590 3.55638 0.12065 3.45782 19 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 20 3.05760 2.57540 3.10693 0.18376 20 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 21 0.14603 3.34943 2.78185 3.24820 21 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 22 2.92590 3.55638 0.12065 3.45782 22 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 23 2.92590 3.55638 0.12065 3.45782 23 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 24 3.05760 2.57540 3.10693 0.18376 24 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 25 2.92590 3.55638 0.12065 3.45782 25 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 26 0.14603 3.34943 2.78185 3.24820 26 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 27 0.14603 3.34943 2.78185 3.24820 27 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 28 3.39755 0.13453 3.44850 2.80304 28 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 29 3.39755 0.13453 3.44850 2.80304 29 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 30 3.05760 2.57540 3.10693 0.18376 30 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 31 2.92590 3.55638 0.12065 3.45782 31 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 32 3.39755 0.13453 3.44850 2.80304 32 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 33 2.92590 3.55638 0.12065 3.45782 33 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 34 2.92590 3.55638 0.12065 3.45782 34 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 35 0.14603 3.34943 2.78185 3.24820 35 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 36 0.14603 3.34943 2.78185 3.24820 36 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 37 2.92590 3.55638 0.12065 3.45782 37 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 38 2.92590 3.55638 0.12065 3.45782 38 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 39 0.14603 3.34943 2.78185 3.24820 39 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 40 3.05760 2.57540 3.10693 0.18376 40 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 41 3.39755 0.13453 3.44850 2.80304 41 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 42 0.14603 3.34943 2.78185 3.24820 42 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 43 3.05760 2.57540 3.10693 0.18376 43 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 44 3.05760 2.57540 3.10693 0.18376 44 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99414 3.99414 1.46634 0.26236 1.09861 0.40547 45 0.14603 3.34943 2.78185 3.24820 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97554 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:02:11 2012 NSEQ 5 EFFN 3.188477 CKSUM 1005625387 STATS LOCAL MSV -8.0565 0.71934 STATS LOCAL VITERBI -7.6761 0.71934 STATS LOCAL FORWARD -4.1063 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33412 1.54688 1.19062 1.51566 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 0.00000 * 1 0.14784 3.33632 2.77329 3.23386 1 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 2 2.91662 3.54297 0.12218 3.44305 2 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 3 3.04447 2.56702 3.09430 0.18596 3 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 4 3.38240 0.13642 3.43398 2.79193 4 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 5 2.91662 3.54297 0.12218 3.44305 5 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 6 3.04447 2.56702 3.09430 0.18596 6 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 7 0.14784 3.33632 2.77329 3.23386 7 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 8 0.14784 3.33632 2.77329 3.23386 8 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 9 3.38240 0.13642 3.43398 2.79193 9 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 10 0.14784 3.33632 2.77329 3.23386 10 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 11 0.14784 3.33632 2.77329 3.23386 11 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 12 2.91662 3.54297 0.12218 3.44305 12 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 13 2.91662 3.54297 0.12218 3.44305 13 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 14 3.04447 2.56702 3.09430 0.18596 14 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 15 3.04447 2.56702 3.09430 0.18596 15 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 16 3.04447 2.56702 3.09430 0.18596 16 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 17 3.38240 0.13642 3.43398 2.79193 17 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 18 3.38240 0.13642 3.43398 2.79193 18 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 19 2.91662 3.54297 0.12218 3.44305 19 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 20 3.04447 2.56702 3.09430 0.18596 20 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 21 0.14784 3.33632 2.77329 3.23386 21 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 22 2.91662 3.54297 0.12218 3.44305 22 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 23 2.91662 3.54297 0.12218 3.44305 23 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 24 3.04447 2.56702 3.09430 0.18596 24 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 25 2.91662 3.54297 0.12218 3.44305 25 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 26 0.14784 3.33632 2.77329 3.23386 26 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 27 0.14784 3.33632 2.77329 3.23386 27 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 28 3.38240 0.13642 3.43398 2.79193 28 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 29 3.38240 0.13642 3.43398 2.79193 29 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 30 3.04447 2.56702 3.09430 0.18596 30 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 31 2.91662 3.54297 0.12218 3.44305 31 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 32 3.38240 0.13642 3.43398 2.79193 32 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 33 2.91662 3.54297 0.12218 3.44305 33 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 34 2.91662 3.54297 0.12218 3.44305 34 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 35 0.14784 3.33632 2.77329 3.23386 35 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 36 0.14784 3.33632 2.77329 3.23386 36 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 37 2.91662 3.54297 0.12218 3.44305 37 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 38 2.91662 3.54297 0.12218 3.44305 38 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 39 0.14784 3.33632 2.77329 3.23386 39 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 40 3.04447 2.56702 3.09430 0.18596 40 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 41 3.38240 0.13642 3.43398 2.79193 41 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 42 0.14784 3.33632 2.77329 3.23386 42 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 43 2.91662 3.54297 0.12218 3.44305 43 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 44 3.04447 2.56702 3.09430 0.18596 44 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98685 3.98685 1.46634 0.26236 1.09861 0.40547 45 3.38240 0.13642 3.43398 2.79193 45 - - 1.38629 1.38629 1.38629 1.38629 0.01909 3.96812 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:03:13 2012 NSEQ 3 EFFN 3.000000 CKSUM 1858634800 STATS LOCAL MSV -8.0140 0.72009 STATS LOCAL VITERBI -7.7088 0.72009 STATS LOCAL FORWARD -4.0438 0.72009 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33458 1.54526 1.19211 1.51460 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:01:47 2012 NSEQ 15 EFFN 3.197021 CKSUM 2497484926 STATS LOCAL MSV -7.9745 0.71933 STATS LOCAL VITERBI -7.7116 0.71933 STATS LOCAL FORWARD -4.1570 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27161 1.63096 1.18852 1.51774 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 0.00000 * 1 0.14744 3.33918 2.77515 3.23698 1 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 2 2.91865 3.54590 0.12184 3.44627 2 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 3 3.04732 2.56884 3.09705 0.18548 3 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 4 3.38570 0.13601 3.43715 2.79436 4 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 5 2.91865 3.54590 0.12184 3.44627 5 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 6 3.04732 2.56884 3.09705 0.18548 6 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 7 0.14744 3.33918 2.77515 3.23698 7 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 8 0.14744 3.33918 2.77515 3.23698 8 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 9 3.38570 0.13601 3.43715 2.79436 9 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 10 0.14744 3.33918 2.77515 3.23698 10 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 11 0.14744 3.33918 2.77515 3.23698 11 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 12 2.91865 3.54590 0.12184 3.44627 12 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 13 2.91865 3.54590 0.12184 3.44627 13 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 14 3.04732 2.56884 3.09705 0.18548 14 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 15 3.04732 2.56884 3.09705 0.18548 15 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 16 3.04732 2.56884 3.09705 0.18548 16 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 17 3.38570 0.13601 3.43715 2.79436 17 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 18 3.38570 0.13601 3.43715 2.79436 18 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 19 2.91865 3.54590 0.12184 3.44627 19 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 20 3.04732 2.56884 3.09705 0.18548 20 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 21 0.14744 3.33918 2.77515 3.23698 21 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 22 2.91865 3.54590 0.12184 3.44627 22 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 23 2.91865 3.54590 0.12184 3.44627 23 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 24 3.04732 2.56884 3.09705 0.18548 24 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 25 2.91865 3.54590 0.12184 3.44627 25 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 26 0.14744 3.33918 2.77515 3.23698 26 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 27 0.14744 3.33918 2.77515 3.23698 27 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 28 3.38570 0.13601 3.43715 2.79436 28 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 29 3.38570 0.13601 3.43715 2.79436 29 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 30 3.04732 2.56884 3.09705 0.18548 30 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 31 2.91865 3.54590 0.12184 3.44627 31 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 32 3.38570 0.13601 3.43715 2.79436 32 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 33 2.91865 3.54590 0.12184 3.44627 33 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 34 2.91865 3.54590 0.12184 3.44627 34 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 35 0.14744 3.33918 2.77515 3.23698 35 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 36 0.14744 3.33918 2.77515 3.23698 36 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 37 2.91865 3.54590 0.12184 3.44627 37 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 38 2.91865 3.54590 0.12184 3.44627 38 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 39 0.14744 3.33918 2.77515 3.23698 39 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 40 3.04732 2.56884 3.09705 0.18548 40 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 41 3.38570 0.13601 3.43715 2.79436 41 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 42 0.14744 3.33918 2.77515 3.23698 42 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 43 3.04732 2.56884 3.09705 0.18548 43 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 44 0.14744 3.33918 2.77515 3.23698 44 - - 1.38629 1.38629 1.38629 1.38629 0.03776 3.98843 3.98843 1.46634 0.26236 1.09861 0.40547 45 2.91865 3.54590 0.12184 3.44627 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96973 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:02:53 2012 NSEQ 37 EFFN 3.193237 CKSUM 2387630304 STATS LOCAL MSV -8.0565 0.71932 STATS LOCAL VITERBI -7.6734 0.71932 STATS LOCAL FORWARD -4.1077 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33411 1.54692 1.19058 1.51568 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 0.00000 * 1 0.14762 3.33791 2.77433 3.23560 1 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 2 2.91775 3.54460 0.12199 3.44484 2 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 3 3.04606 2.56804 3.09583 0.18569 3 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 4 3.38424 0.13619 3.43575 2.79329 4 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 5 2.91775 3.54460 0.12199 3.44484 5 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 6 3.04606 2.56804 3.09583 0.18569 6 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 7 0.14762 3.33791 2.77433 3.23560 7 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 8 0.14762 3.33791 2.77433 3.23560 8 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 9 3.38424 0.13619 3.43575 2.79329 9 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 10 0.14762 3.33791 2.77433 3.23560 10 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 11 0.14762 3.33791 2.77433 3.23560 11 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 12 2.91775 3.54460 0.12199 3.44484 12 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 13 2.91775 3.54460 0.12199 3.44484 13 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 14 3.04606 2.56804 3.09583 0.18569 14 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 15 3.04606 2.56804 3.09583 0.18569 15 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 16 3.04606 2.56804 3.09583 0.18569 16 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 17 3.38424 0.13619 3.43575 2.79329 17 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 18 3.38424 0.13619 3.43575 2.79329 18 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 19 2.91775 3.54460 0.12199 3.44484 19 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 20 3.04606 2.56804 3.09583 0.18569 20 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 21 0.14762 3.33791 2.77433 3.23560 21 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 22 2.91775 3.54460 0.12199 3.44484 22 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 23 2.91775 3.54460 0.12199 3.44484 23 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 24 3.04606 2.56804 3.09583 0.18569 24 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 25 2.91775 3.54460 0.12199 3.44484 25 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 26 0.14762 3.33791 2.77433 3.23560 26 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 27 0.14762 3.33791 2.77433 3.23560 27 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 28 3.38424 0.13619 3.43575 2.79329 28 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 29 3.38424 0.13619 3.43575 2.79329 29 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 30 3.04606 2.56804 3.09583 0.18569 30 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 31 2.91775 3.54460 0.12199 3.44484 31 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 32 3.38424 0.13619 3.43575 2.79329 32 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 33 2.91775 3.54460 0.12199 3.44484 33 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 34 2.91775 3.54460 0.12199 3.44484 34 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 35 0.14762 3.33791 2.77433 3.23560 35 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 36 0.14762 3.33791 2.77433 3.23560 36 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 37 2.91775 3.54460 0.12199 3.44484 37 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 38 2.91775 3.54460 0.12199 3.44484 38 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 39 0.14762 3.33791 2.77433 3.23560 39 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 40 3.04606 2.56804 3.09583 0.18569 40 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 41 3.38424 0.13619 3.43575 2.79329 41 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 42 0.14762 3.33791 2.77433 3.23560 42 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 43 2.91775 3.54460 0.12199 3.44484 43 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 44 3.04606 2.56804 3.09583 0.18569 44 - - 1.38629 1.38629 1.38629 1.38629 0.03779 3.98773 3.98773 1.46634 0.26236 1.09861 0.40547 45 3.38424 0.13619 3.43575 2.79329 45 - - 1.38629 1.38629 1.38629 1.38629 0.01907 3.96902 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:02:29 2012 NSEQ 6 EFFN 3.196289 CKSUM 3863508261 STATS LOCAL MSV -7.9745 0.71933 STATS LOCAL VITERBI -7.7116 0.71933 STATS LOCAL FORWARD -4.1567 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27161 1.63095 1.18853 1.51774 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 0.00000 * 1 0.14748 3.33893 2.77499 3.23671 1 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 2 2.91847 3.54565 0.12187 3.44599 2 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 3 3.04708 2.56869 3.09681 0.18552 3 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 4 3.38542 0.13604 3.43688 2.79415 4 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 5 2.91847 3.54565 0.12187 3.44599 5 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 6 3.04708 2.56869 3.09681 0.18552 6 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 7 0.14748 3.33893 2.77499 3.23671 7 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 8 0.14748 3.33893 2.77499 3.23671 8 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 9 3.38542 0.13604 3.43688 2.79415 9 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 10 0.14748 3.33893 2.77499 3.23671 10 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 11 0.14748 3.33893 2.77499 3.23671 11 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 12 2.91847 3.54565 0.12187 3.44599 12 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 13 2.91847 3.54565 0.12187 3.44599 13 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 14 3.04708 2.56869 3.09681 0.18552 14 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 15 3.04708 2.56869 3.09681 0.18552 15 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 16 3.04708 2.56869 3.09681 0.18552 16 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 17 3.38542 0.13604 3.43688 2.79415 17 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 18 3.38542 0.13604 3.43688 2.79415 18 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 19 2.91847 3.54565 0.12187 3.44599 19 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 20 3.04708 2.56869 3.09681 0.18552 20 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 21 0.14748 3.33893 2.77499 3.23671 21 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 22 2.91847 3.54565 0.12187 3.44599 22 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 23 2.91847 3.54565 0.12187 3.44599 23 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 24 3.04708 2.56869 3.09681 0.18552 24 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 25 2.91847 3.54565 0.12187 3.44599 25 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 26 0.14748 3.33893 2.77499 3.23671 26 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 27 0.14748 3.33893 2.77499 3.23671 27 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 28 3.38542 0.13604 3.43688 2.79415 28 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 29 3.38542 0.13604 3.43688 2.79415 29 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 30 3.04708 2.56869 3.09681 0.18552 30 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 31 2.91847 3.54565 0.12187 3.44599 31 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 32 3.38542 0.13604 3.43688 2.79415 32 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 33 2.91847 3.54565 0.12187 3.44599 33 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 34 2.91847 3.54565 0.12187 3.44599 34 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 35 0.14748 3.33893 2.77499 3.23671 35 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 36 0.14748 3.33893 2.77499 3.23671 36 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 37 2.91847 3.54565 0.12187 3.44599 37 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 38 2.91847 3.54565 0.12187 3.44599 38 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 39 0.14748 3.33893 2.77499 3.23671 39 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 40 3.04708 2.56869 3.09681 0.18552 40 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 41 3.38542 0.13604 3.43688 2.79415 41 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 42 0.14748 3.33893 2.77499 3.23671 42 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 43 3.04708 2.56869 3.09681 0.18552 43 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 44 0.14748 3.33893 2.77499 3.23671 44 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 45 2.91847 3.54565 0.12187 3.44599 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96959 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:02:03 2012 NSEQ 21 EFFN 3.227417 CKSUM 1846859552 STATS LOCAL MSV -8.0048 0.71932 STATS LOCAL VITERBI -7.6837 0.71932 STATS LOCAL FORWARD -4.1095 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27188 1.62648 1.24658 1.44567 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 0.00000 * 1 0.14606 3.34927 2.78175 3.24802 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 2 2.92579 3.55621 0.12067 3.45764 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 3 3.05744 2.57529 3.10678 0.18378 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 4 3.39736 0.13455 3.44832 2.80290 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 5 2.92579 3.55621 0.12067 3.45764 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 6 3.05744 2.57529 3.10678 0.18378 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 7 0.14606 3.34927 2.78175 3.24802 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 8 0.14606 3.34927 2.78175 3.24802 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 9 3.39736 0.13455 3.44832 2.80290 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 10 0.14606 3.34927 2.78175 3.24802 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 11 0.14606 3.34927 2.78175 3.24802 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 12 2.92579 3.55621 0.12067 3.45764 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 13 2.92579 3.55621 0.12067 3.45764 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 14 3.05744 2.57529 3.10678 0.18378 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 15 3.05744 2.57529 3.10678 0.18378 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 16 3.05744 2.57529 3.10678 0.18378 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 17 3.39736 0.13455 3.44832 2.80290 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 18 3.39736 0.13455 3.44832 2.80290 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 19 2.92579 3.55621 0.12067 3.45764 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 20 3.05744 2.57529 3.10678 0.18378 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 21 0.14606 3.34927 2.78175 3.24802 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 22 2.92579 3.55621 0.12067 3.45764 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 23 2.92579 3.55621 0.12067 3.45764 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 24 3.05744 2.57529 3.10678 0.18378 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 25 2.92579 3.55621 0.12067 3.45764 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 26 0.14606 3.34927 2.78175 3.24802 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 27 0.14606 3.34927 2.78175 3.24802 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 28 3.39736 0.13455 3.44832 2.80290 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 29 3.39736 0.13455 3.44832 2.80290 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 30 3.05744 2.57529 3.10678 0.18378 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 31 2.92579 3.55621 0.12067 3.45764 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 32 3.39736 0.13455 3.44832 2.80290 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 33 2.92579 3.55621 0.12067 3.45764 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 34 2.92579 3.55621 0.12067 3.45764 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 35 0.14606 3.34927 2.78175 3.24802 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 36 0.14606 3.34927 2.78175 3.24802 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 37 2.92579 3.55621 0.12067 3.45764 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 38 2.92579 3.55621 0.12067 3.45764 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 39 0.14606 3.34927 2.78175 3.24802 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 40 3.05744 2.57529 3.10678 0.18378 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 41 3.39736 0.13455 3.44832 2.80290 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 42 0.14606 3.34927 2.78175 3.24802 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 43 3.05744 2.57529 3.10678 0.18378 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 44 3.05744 2.57529 3.10678 0.18378 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99405 3.99405 1.46634 0.26236 1.09861 0.40547 45 0.14606 3.34927 2.78175 3.24802 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97545 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Tu_1_SSU_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 7 15:01:54 2012 NSEQ 7 EFFN 3.216309 CKSUM 2437150758 STATS LOCAL MSV -7.9739 0.71932 STATS LOCAL VITERBI -7.6739 0.71932 STATS LOCAL FORWARD -4.1316 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33300 1.62698 1.18954 1.44633 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 * 1 0.14656 3.34560 2.77935 3.24400 1 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 2 2.92319 3.55246 0.12110 3.45350 2 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 3 3.05375 2.57294 3.10323 0.18440 3 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 4 3.39312 0.13508 3.44425 2.79979 4 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 5 2.92319 3.55246 0.12110 3.45350 5 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 6 3.05375 2.57294 3.10323 0.18440 6 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 7 0.14656 3.34560 2.77935 3.24400 7 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 8 0.14656 3.34560 2.77935 3.24400 8 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 9 3.39312 0.13508 3.44425 2.79979 9 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 10 0.14656 3.34560 2.77935 3.24400 10 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 11 0.14656 3.34560 2.77935 3.24400 11 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 12 2.92319 3.55246 0.12110 3.45350 12 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 13 2.92319 3.55246 0.12110 3.45350 13 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 14 3.05375 2.57294 3.10323 0.18440 14 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 15 3.05375 2.57294 3.10323 0.18440 15 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 16 3.05375 2.57294 3.10323 0.18440 16 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 17 3.39312 0.13508 3.44425 2.79979 17 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 18 3.39312 0.13508 3.44425 2.79979 18 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 19 2.92319 3.55246 0.12110 3.45350 19 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 20 3.05375 2.57294 3.10323 0.18440 20 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 21 0.14656 3.34560 2.77935 3.24400 21 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 22 2.92319 3.55246 0.12110 3.45350 22 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 23 2.92319 3.55246 0.12110 3.45350 23 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 24 3.05375 2.57294 3.10323 0.18440 24 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 25 2.92319 3.55246 0.12110 3.45350 25 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 26 0.14656 3.34560 2.77935 3.24400 26 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 27 0.14656 3.34560 2.77935 3.24400 27 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 28 3.39312 0.13508 3.44425 2.79979 28 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 29 3.39312 0.13508 3.44425 2.79979 29 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 30 3.05375 2.57294 3.10323 0.18440 30 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 31 2.92319 3.55246 0.12110 3.45350 31 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 32 3.39312 0.13508 3.44425 2.79979 32 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 33 2.92319 3.55246 0.12110 3.45350 33 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 34 2.92319 3.55246 0.12110 3.45350 34 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 35 0.14656 3.34560 2.77935 3.24400 35 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 36 0.14656 3.34560 2.77935 3.24400 36 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 37 2.92319 3.55246 0.12110 3.45350 37 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 38 2.92319 3.55246 0.12110 3.45350 38 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 39 0.14656 3.34560 2.77935 3.24400 39 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 40 3.05375 2.57294 3.10323 0.18440 40 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 41 3.39312 0.13508 3.44425 2.79979 41 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 42 0.14656 3.34560 2.77935 3.24400 42 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 43 3.05375 2.57294 3.10323 0.18440 43 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 44 2.92319 3.55246 0.12110 3.45350 44 - - 1.38629 1.38629 1.38629 1.38629 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547 45 3.05375 2.57294 3.10323 0.18440 45 - - 1.38629 1.38629 1.38629 1.38629 0.01899 3.97336 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:09:18 2012 NSEQ 2 EFFN 2.000000 CKSUM 3051067304 STATS LOCAL MSV -7.5529 0.72909 STATS LOCAL VITERBI -8.5278 0.72909 STATS LOCAL FORWARD -2.9668 0.72909 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.00986 2.11878 1.61526 1.14976 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.23862 2.84929 2.43386 2.70756 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.23862 2.84929 2.43386 2.70756 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:08:14 2012 NSEQ 54 EFFN 3.200317 CKSUM 3049350485 STATS LOCAL MSV -8.0020 0.71933 STATS LOCAL VITERBI -7.6828 0.71933 STATS LOCAL FORWARD -4.3608 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33558 1.54668 1.18968 1.51539 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 0.00000 * 1 0.14729 3.34028 2.77587 3.23818 1 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 2 2.91943 3.54702 0.12172 3.44751 2 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 3 3.04842 2.56955 3.09811 0.18529 3 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 4 3.38697 0.13585 3.43836 2.79529 4 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 5 2.91943 3.54702 0.12172 3.44751 5 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 6 3.04842 2.56955 3.09811 0.18529 6 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 7 0.14729 3.34028 2.77587 3.23818 7 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 8 0.14729 3.34028 2.77587 3.23818 8 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 9 3.38697 0.13585 3.43836 2.79529 9 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 10 0.14729 3.34028 2.77587 3.23818 10 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 11 0.14729 3.34028 2.77587 3.23818 11 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 12 2.91943 3.54702 0.12172 3.44751 12 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 13 2.91943 3.54702 0.12172 3.44751 13 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 14 3.04842 2.56955 3.09811 0.18529 14 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 15 3.38697 0.13585 3.43836 2.79529 15 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 16 3.04842 2.56955 3.09811 0.18529 16 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 17 3.38697 0.13585 3.43836 2.79529 17 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 18 3.38697 0.13585 3.43836 2.79529 18 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 19 2.91943 3.54702 0.12172 3.44751 19 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 20 3.04842 2.56955 3.09811 0.18529 20 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 21 3.04842 2.56955 3.09811 0.18529 21 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 22 2.91943 3.54702 0.12172 3.44751 22 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 23 2.91943 3.54702 0.12172 3.44751 23 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 24 3.04842 2.56955 3.09811 0.18529 24 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 25 2.91943 3.54702 0.12172 3.44751 25 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 26 0.14729 3.34028 2.77587 3.23818 26 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 27 0.14729 3.34028 2.77587 3.23818 27 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 28 3.38697 0.13585 3.43836 2.79529 28 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 29 3.38697 0.13585 3.43836 2.79529 29 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 30 0.14729 3.34028 2.77587 3.23818 30 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 31 2.91943 3.54702 0.12172 3.44751 31 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 32 3.38697 0.13585 3.43836 2.79529 32 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 33 2.91943 3.54702 0.12172 3.44751 33 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 34 2.91943 3.54702 0.12172 3.44751 34 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 35 0.14729 3.34028 2.77587 3.23818 35 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 36 2.91943 3.54702 0.12172 3.44751 36 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 37 2.91943 3.54702 0.12172 3.44751 37 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 38 2.91943 3.54702 0.12172 3.44751 38 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 39 0.14729 3.34028 2.77587 3.23818 39 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 40 3.04842 2.56955 3.09811 0.18529 40 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 41 3.38697 0.13585 3.43836 2.79529 41 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 42 0.14729 3.34028 2.77587 3.23818 42 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 43 3.04842 2.56955 3.09811 0.18529 43 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 44 3.04842 2.56955 3.09811 0.18529 44 - - 1.38629 1.38629 1.38629 1.38629 0.03774 3.98904 3.98904 1.46634 0.26236 1.09861 0.40547 45 0.16973 3.25773 2.59185 3.15236 45 - - 1.38629 1.38629 1.38629 1.38629 0.01905 3.97035 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:06:32 2012 NSEQ 43 EFFN 3.246521 CKSUM 2560080350 STATS LOCAL MSV -8.0183 0.71933 STATS LOCAL VITERBI -7.8483 0.71933 STATS LOCAL FORWARD -4.2170 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27441 1.62473 1.24608 1.44474 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 0.00000 * 1 0.14520 3.35557 2.78585 3.25490 1 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 2 2.93022 3.56264 0.11995 3.46472 2 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 3 3.06375 2.57932 3.11285 0.18274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 4 3.40463 0.13366 3.45529 2.80822 4 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 5 2.93022 3.56264 0.11995 3.46472 5 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 6 3.06375 2.57932 3.11285 0.18274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 7 0.14520 3.35557 2.78585 3.25490 7 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 8 0.14520 3.35557 2.78585 3.25490 8 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 9 3.40463 0.13366 3.45529 2.80822 9 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 10 0.14520 3.35557 2.78585 3.25490 10 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 11 0.14520 3.35557 2.78585 3.25490 11 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 12 2.93022 3.56264 0.11995 3.46472 12 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 13 2.93022 3.56264 0.11995 3.46472 13 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 14 3.06375 2.57932 3.11285 0.18274 14 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 15 0.14520 3.35557 2.78585 3.25490 15 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 16 0.14520 3.35557 2.78585 3.25490 16 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 17 3.40463 0.13366 3.45529 2.80822 17 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 18 3.40463 0.13366 3.45529 2.80822 18 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 19 2.93022 3.56264 0.11995 3.46472 19 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 20 3.06375 2.57932 3.11285 0.18274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 21 0.14520 3.35557 2.78585 3.25490 21 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 22 2.93022 3.56264 0.11995 3.46472 22 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 23 2.93022 3.56264 0.11995 3.46472 23 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 24 3.06375 2.57932 3.11285 0.18274 24 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 25 2.93022 3.56264 0.11995 3.46472 25 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 26 0.14520 3.35557 2.78585 3.25490 26 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 27 0.14520 3.35557 2.78585 3.25490 27 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 28 3.40463 0.13366 3.45529 2.80822 28 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 29 3.40463 0.13366 3.45529 2.80822 29 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 30 3.06375 2.57932 3.11285 0.18274 30 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 31 2.93022 3.56264 0.11995 3.46472 31 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 32 3.40463 0.13366 3.45529 2.80822 32 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 33 2.93022 3.56264 0.11995 3.46472 33 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 34 2.93022 3.56264 0.11995 3.46472 34 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 35 3.06375 2.57932 3.11285 0.18274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 36 3.06375 2.57932 3.11285 0.18274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 37 2.93022 3.56264 0.11995 3.46472 37 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 38 2.93022 3.56264 0.11995 3.46472 38 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 39 0.14520 3.35557 2.78585 3.25490 39 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 40 3.06375 2.57932 3.11285 0.18274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 41 3.40463 0.13366 3.45529 2.80822 41 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 42 0.14520 3.35557 2.78585 3.25490 42 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 43 3.06375 2.57932 3.11285 0.18274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 44 3.06375 2.57932 3.11285 0.18274 44 - - 1.38629 1.38629 1.38629 1.38629 0.03741 3.99756 3.99756 1.46634 0.26236 1.09861 0.40547 45 0.18820 2.90547 2.68890 3.01856 45 - - 1.38629 1.38629 1.38629 1.38629 0.01888 3.97903 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:07:36 2012 NSEQ 2 EFFN 2.000000 CKSUM 4122535879 STATS LOCAL MSV -7.3837 0.72782 STATS LOCAL VITERBI -8.2233 0.72782 STATS LOCAL FORWARD -3.6249 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28359 1.60112 1.25644 1.44128 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_fourc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:07:43 2012 NSEQ 2 EFFN 2.000000 CKSUM 2504494684 STATS LOCAL MSV -7.4175 0.72862 STATS LOCAL VITERBI -8.2203 0.72862 STATS LOCAL FORWARD -3.6723 0.72862 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27979 1.63855 1.30647 1.35919 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.15554 1.00938 2.23102 0.88601 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_fourd_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:07:49 2012 NSEQ 2 EFFN 2.000000 CKSUM 2556732940 STATS LOCAL MSV -7.5647 0.72840 STATS LOCAL VITERBI -8.3666 0.72840 STATS LOCAL FORWARD -3.6454 0.72840 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.36979 1.59381 1.20294 1.41725 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.57915 2.25909 2.64442 0.28946 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 1.03732 1.95876 1.96551 1.00928 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_foure_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:07:57 2012 NSEQ 3 EFFN 3.000000 CKSUM 3676828728 STATS LOCAL MSV -8.0917 0.72037 STATS LOCAL VITERBI -7.8615 0.72037 STATS LOCAL FORWARD -3.9930 0.72037 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.21590 1.70640 1.30590 1.38186 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.97980 2.52563 3.03204 0.19727 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_fourf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:08:02 2012 NSEQ 2 EFFN 2.000000 CKSUM 730859438 STATS LOCAL MSV -7.3530 0.72812 STATS LOCAL VITERBI -8.3961 0.72812 STATS LOCAL FORWARD -3.4972 0.72812 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18461 1.66969 1.36387 1.38566 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:09:29 2012 NSEQ 2 EFFN 2.000000 CKSUM 568477423 STATS LOCAL MSV -7.3282 0.72906 STATS LOCAL VITERBI -8.4171 0.72906 STATS LOCAL FORWARD -3.4465 0.72906 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13241 1.88183 1.41756 1.26186 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.15554 1.00938 2.23102 0.88601 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.23862 2.84929 2.43386 2.70756 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53331 3.02441 0.20344 2.88069 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_onea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:04:23 2012 NSEQ 308 EFFN 3.379089 CKSUM 1720090319 STATS LOCAL MSV -7.3882 0.71934 STATS LOCAL VITERBI -7.6658 0.71934 STATS LOCAL FORWARD -4.1327 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27417 1.62331 1.24449 1.44815 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 0.00000 * 1 0.13956 3.39815 2.81353 3.30152 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 2 2.95997 3.60588 0.11520 3.51244 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 3 3.10671 2.60665 3.15417 0.17579 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 4 3.45371 0.12778 3.50229 2.84397 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 5 2.79926 3.53221 0.13046 3.43525 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 6 3.10671 2.60665 3.15417 0.17579 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 7 0.13956 3.39815 2.81353 3.30152 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 8 0.13956 3.39815 2.81353 3.30152 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 9 3.45371 0.12778 3.50229 2.84397 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 10 0.13956 3.39815 2.81353 3.30152 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 11 0.13956 3.39815 2.81353 3.30152 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 12 2.95997 3.60588 0.11520 3.51244 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 13 2.95997 3.60588 0.11520 3.51244 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 14 3.10671 2.60665 3.15417 0.17579 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 15 2.87915 2.09473 2.93510 0.26450 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 16 3.10671 2.60665 3.15417 0.17579 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 17 3.30322 0.16113 3.35642 2.56139 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 18 3.34642 0.15099 3.39824 2.63801 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 19 2.95997 3.60588 0.11520 3.51244 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 20 3.10671 2.60665 3.15417 0.17579 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 21 0.13956 3.39815 2.81353 3.30152 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 22 2.95997 3.60588 0.11520 3.51244 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 23 2.95997 3.60588 0.11520 3.51244 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 24 3.10671 2.60665 3.15417 0.17579 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 25 2.95997 3.60588 0.11520 3.51244 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 26 0.13956 3.39815 2.81353 3.30152 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 27 0.13956 3.39815 2.81353 3.30152 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 28 3.45371 0.12778 3.50229 2.84397 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 29 3.45371 0.12778 3.50229 2.84397 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 30 3.10671 2.60665 3.15417 0.17579 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 31 2.95997 3.60588 0.11520 3.51244 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 32 3.45371 0.12778 3.50229 2.84397 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 33 2.72689 3.49604 0.13836 3.39690 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 34 2.81325 3.53900 0.12901 3.44242 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 35 0.13956 3.39815 2.81353 3.30152 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 36 0.21072 3.15491 2.30541 3.04413 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 37 2.95997 3.60588 0.11520 3.51244 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 38 2.95997 3.60588 0.11520 3.51244 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 39 0.13956 3.39815 2.81353 3.30152 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 40 3.10671 2.60665 3.15417 0.17579 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 41 3.45371 0.12778 3.50229 2.84397 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 42 0.13956 3.39815 2.81353 3.30152 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 43 3.04954 2.46530 3.09897 0.19536 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 44 3.05662 2.48215 3.10578 0.19286 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02161 4.02161 1.46634 0.26236 1.09861 0.40547 45 0.18742 3.00518 2.70132 2.91404 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00352 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_oneb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:04:30 2012 NSEQ 3 EFFN 3.000000 CKSUM 2202534948 STATS LOCAL MSV -7.9132 0.72042 STATS LOCAL VITERBI -7.9380 0.72042 STATS LOCAL FORWARD -3.9845 0.72042 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16204 1.70561 1.36957 1.38121 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:09:09 2012 NSEQ 40 EFFN 3.305664 CKSUM 785789016 STATS LOCAL MSV -8.0264 0.71934 STATS LOCAL VITERBI -7.7303 0.71934 STATS LOCAL FORWARD -4.0831 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26454 1.62666 1.26380 1.43352 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 0.00000 * 1 0.14262 3.37480 2.79837 3.27595 1 - - 1.38629 1.38629 1.38629 1.38629 0.10155 4.00836 2.54589 1.46634 0.26236 1.09861 0.40547 2 2.86303 3.46626 0.13137 3.35872 2 - - 1.38629 1.38629 1.38629 1.38629 0.03942 3.94623 3.94623 1.46634 0.26236 0.38071 1.15004 3 3.08310 2.59163 3.13146 0.17957 3 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 4 3.42681 0.13096 3.47654 2.82441 4 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 5 2.94371 3.58221 0.11777 3.48630 5 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 6 3.08310 2.59163 3.13146 0.17957 6 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 7 0.14262 3.37480 2.79837 3.27595 7 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 8 0.14262 3.37480 2.79837 3.27595 8 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 9 3.42681 0.13096 3.47654 2.82441 9 - - 1.38629 1.38629 1.38629 1.38629 0.10189 4.00836 2.54206 1.46634 0.26236 1.09861 0.40547 10 0.15868 3.26127 2.72386 3.15194 10 - - 1.38629 1.38629 1.38629 1.38629 0.03943 3.94591 3.94591 1.46634 0.26236 0.37950 1.15265 11 0.14262 3.37480 2.79837 3.27595 11 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 12 2.94371 3.58221 0.11777 3.48630 12 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 13 2.94371 3.58221 0.11777 3.48630 13 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 14 3.08310 2.59163 3.13146 0.17957 14 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 15 3.08310 2.59163 3.13146 0.17957 15 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 16 3.08310 2.59163 3.13146 0.17957 16 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 17 3.42681 0.13096 3.47654 2.82441 17 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 18 3.42681 0.13096 3.47654 2.82441 18 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 19 2.94371 3.58221 0.11777 3.48630 19 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 20 3.08310 2.59163 3.13146 0.17957 20 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 21 0.14262 3.37480 2.79837 3.27595 21 - - 1.38629 1.38629 1.38629 1.38629 0.38391 4.00836 1.20182 1.46634 0.26236 1.09861 0.40547 22 2.41934 2.88343 0.23580 2.73124 22 - - 1.38629 1.38629 1.38629 1.38629 0.05195 3.67640 3.67640 1.46634 0.26236 0.11407 2.22746 23 2.94371 3.58221 0.11777 3.48630 23 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 24 3.08310 2.59163 3.13146 0.17957 24 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 25 2.94371 3.58221 0.11777 3.48630 25 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 26 0.14262 3.37480 2.79837 3.27595 26 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 27 0.14262 3.37480 2.79837 3.27595 27 - - 1.38629 1.38629 1.38629 1.38629 0.13583 4.00836 2.21785 1.46634 0.26236 1.09861 0.40547 28 3.22438 0.15815 3.28213 2.67433 28 - - 1.38629 1.38629 1.38629 1.38629 0.04077 3.91330 3.91330 1.46634 0.26236 0.28799 1.38536 29 3.42681 0.13096 3.47654 2.82441 29 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 30 3.08310 2.59163 3.13146 0.17957 30 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 31 2.94371 3.58221 0.11777 3.48630 31 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 32 3.42681 0.13096 3.47654 2.82441 32 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 33 2.94371 3.58221 0.11777 3.48630 33 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 34 2.94371 3.58221 0.11777 3.48630 34 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 35 0.14262 3.37480 2.79837 3.27595 35 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 36 0.14262 3.37480 2.79837 3.27595 36 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 37 2.94371 3.58221 0.11777 3.48630 37 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 38 2.94371 3.58221 0.11777 3.48630 38 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 39 0.14262 3.37480 2.79837 3.27595 39 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 40 3.08310 2.59163 3.13146 0.17957 40 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 41 3.42681 0.13096 3.47654 2.82441 41 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 42 0.14262 3.37480 2.79837 3.27595 42 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 43 3.08310 2.59163 3.13146 0.17957 43 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 44 3.08310 2.59163 3.13146 0.17957 44 - - 1.38629 1.38629 1.38629 1.38629 0.03700 4.00836 4.00836 1.46634 0.26236 1.09861 0.40547 45 0.14262 3.37480 2.79837 3.27595 45 - - 1.38629 1.38629 1.38629 1.38629 0.01867 3.99003 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:08:22 2012 NSEQ 2 EFFN 2.000000 CKSUM 879004445 STATS LOCAL MSV -7.4348 0.72760 STATS LOCAL VITERBI -8.1769 0.72760 STATS LOCAL FORWARD -3.4529 0.72760 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23449 1.53956 1.25635 1.56135 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.53331 3.02441 0.20344 2.88069 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:09:36 2012 NSEQ 4 EFFN 3.433594 CKSUM 336901453 STATS LOCAL MSV -7.3635 0.71933 STATS LOCAL VITERBI -7.6826 0.71933 STATS LOCAL FORWARD -4.1239 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28125 1.62039 1.25772 1.42633 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 0.00000 * 1 0.13738 3.41512 2.82452 3.32011 1 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 2 2.97169 3.62301 0.11337 3.53137 2 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 3 3.12394 2.61759 3.17074 0.17309 3 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 4 3.47324 0.12552 3.52097 2.85812 4 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 5 2.97169 3.62301 0.11337 3.53137 5 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 6 3.12394 2.61759 3.17074 0.17309 6 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 7 0.13738 3.41512 2.82452 3.32011 7 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 8 0.13738 3.41512 2.82452 3.32011 8 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 9 3.47324 0.12552 3.52097 2.85812 9 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 10 0.13738 3.41512 2.82452 3.32011 10 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 11 0.13738 3.41512 2.82452 3.32011 11 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 12 2.97169 3.62301 0.11337 3.53137 12 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 13 2.97169 3.62301 0.11337 3.53137 13 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 14 3.12394 2.61759 3.17074 0.17309 14 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 15 3.12394 2.61759 3.17074 0.17309 15 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 16 3.12394 2.61759 3.17074 0.17309 16 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 17 3.47324 0.12552 3.52097 2.85812 17 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 18 3.47324 0.12552 3.52097 2.85812 18 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 19 2.97169 3.62301 0.11337 3.53137 19 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 20 3.12394 2.61759 3.17074 0.17309 20 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 21 0.13738 3.41512 2.82452 3.32011 21 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 22 2.97169 3.62301 0.11337 3.53137 22 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 23 2.97169 3.62301 0.11337 3.53137 23 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 24 3.12394 2.61759 3.17074 0.17309 24 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 25 2.97169 3.62301 0.11337 3.53137 25 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 26 0.13738 3.41512 2.82452 3.32011 26 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 27 0.13738 3.41512 2.82452 3.32011 27 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 28 3.47324 0.12552 3.52097 2.85812 28 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 29 3.47324 0.12552 3.52097 2.85812 29 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 30 3.12394 2.61759 3.17074 0.17309 30 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 31 2.97169 3.62301 0.11337 3.53137 31 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 32 3.47324 0.12552 3.52097 2.85812 32 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 33 1.66994 2.85289 0.37387 2.71814 33 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 34 2.97169 3.62301 0.11337 3.53137 34 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 35 0.13738 3.41512 2.82452 3.32011 35 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 36 0.13738 3.41512 2.82452 3.32011 36 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 37 2.97169 3.62301 0.11337 3.53137 37 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 38 2.97169 3.62301 0.11337 3.53137 38 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 39 0.13738 3.41512 2.82452 3.32011 39 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 40 3.12394 2.61759 3.17074 0.17309 40 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 41 3.47324 0.12552 3.52097 2.85812 41 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 42 0.13738 3.41512 2.82452 3.32011 42 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 43 3.12394 2.61759 3.17074 0.17309 43 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 44 3.12394 2.61759 3.17074 0.17309 44 - - 1.38629 1.38629 1.38629 1.38629 0.03615 4.03133 4.03133 1.46634 0.26236 1.09861 0.40547 45 0.52815 2.38917 2.28516 1.52859 45 - - 1.38629 1.38629 1.38629 1.38629 0.01824 4.01342 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threea_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:02 2012 NSEQ 2 EFFN 2.000000 CKSUM 3796533510 STATS LOCAL MSV -7.3854 0.72836 STATS LOCAL VITERBI -8.1792 0.72836 STATS LOCAL FORWARD -3.5609 0.72836 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18248 1.82844 1.36144 1.28544 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threeb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:11 2012 NSEQ 3 EFFN 3.000000 CKSUM 3183345847 STATS LOCAL MSV -7.8994 0.72084 STATS LOCAL VITERBI -7.8571 0.72084 STATS LOCAL FORWARD -3.9083 0.72084 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.10773 2.14067 1.43245 1.16029 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 0.15719 3.27118 2.73043 3.16274 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.97980 2.52563 3.03204 0.19727 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threec_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:17 2012 NSEQ 9 EFFN 3.563965 CKSUM 867010079 STATS LOCAL MSV -7.5589 0.71932 STATS LOCAL VITERBI -7.7275 0.71932 STATS LOCAL FORWARD -4.2285 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.14705 1.93754 1.36394 1.26330 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 0.00000 * 1 0.13247 3.45449 2.84993 3.36328 1 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 2 2.99862 3.66252 0.10930 3.57508 2 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 3 3.16417 2.64312 3.20941 0.16696 3 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 4 2.46606 1.08588 2.53668 0.69646 4 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 5 2.99862 3.66252 0.10930 3.57508 5 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 6 3.16417 2.64312 3.20941 0.16696 6 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 7 0.13247 3.45449 2.84993 3.36328 7 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 8 0.13247 3.45449 2.84993 3.36328 8 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 9 2.54466 0.58530 2.61593 1.23285 9 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 10 0.13247 3.45449 2.84993 3.36328 10 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 11 0.13247 3.45449 2.84993 3.36328 11 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 12 2.99862 3.66252 0.10930 3.57508 12 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 13 2.99862 3.66252 0.10930 3.57508 13 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 14 3.16417 2.64312 3.20941 0.16696 14 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 15 3.16417 2.64312 3.20941 0.16696 15 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 16 3.16417 2.64312 3.20941 0.16696 16 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 17 3.51842 0.12048 3.56419 2.89070 17 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 18 3.16417 2.64312 3.20941 0.16696 18 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 19 2.99862 3.66252 0.10930 3.57508 19 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 20 3.16417 2.64312 3.20941 0.16696 20 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 21 0.13247 3.45449 2.84993 3.36328 21 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 22 2.99862 3.66252 0.10930 3.57508 22 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 23 2.99862 3.66252 0.10930 3.57508 23 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 24 3.16417 2.64312 3.20941 0.16696 24 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 25 0.13247 3.45449 2.84993 3.36328 25 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 26 0.13247 3.45449 2.84993 3.36328 26 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 27 0.13247 3.45449 2.84993 3.36328 27 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 28 3.51842 0.12048 3.56419 2.89070 28 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 29 3.51842 0.12048 3.56419 2.89070 29 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 30 3.16417 2.64312 3.20941 0.16696 30 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 31 2.99862 3.66252 0.10930 3.57508 31 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 32 3.51842 0.12048 3.56419 2.89070 32 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 33 0.13247 3.45449 2.84993 3.36328 33 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 34 2.99862 3.66252 0.10930 3.57508 34 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 35 0.13247 3.45449 2.84993 3.36328 35 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 36 0.13247 3.45449 2.84993 3.36328 36 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 37 2.99862 3.66252 0.10930 3.57508 37 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 38 2.99862 3.66252 0.10930 3.57508 38 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 39 0.13247 3.45449 2.84993 3.36328 39 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 40 3.16417 2.64312 3.20941 0.16696 40 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 41 3.16417 2.64312 3.20941 0.16696 41 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 42 0.13247 3.45449 2.84993 3.36328 42 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 43 3.16417 2.64312 3.20941 0.16696 43 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 44 3.16417 2.64312 3.20941 0.16696 44 - - 1.38629 1.38629 1.38629 1.38629 0.03531 4.05421 4.05421 1.46634 0.26236 1.09861 0.40547 45 0.13247 3.45449 2.84993 3.36328 45 - - 1.38629 1.38629 1.38629 1.38629 0.01781 4.03671 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threed_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:22 2012 NSEQ 5 EFFN 3.471680 CKSUM 2613461629 STATS LOCAL MSV -7.4492 0.71933 STATS LOCAL VITERBI -7.8222 0.71933 STATS LOCAL FORWARD -4.1448 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.07250 1.91694 1.49255 1.25179 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 0.00000 * 1 0.13590 3.42680 2.83207 3.33291 1 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 2 2.97972 3.63476 0.11214 3.54436 2 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 3 3.13583 2.62514 3.18217 0.17125 3 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 4 3.13583 2.62514 3.18217 0.17125 4 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 5 2.97972 3.63476 0.11214 3.54436 5 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 6 3.13583 2.62514 3.18217 0.17125 6 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 7 0.13590 3.42680 2.83207 3.33291 7 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 8 0.13590 3.42680 2.83207 3.33291 8 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 9 3.48665 0.12400 3.53381 2.86782 9 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 10 0.13590 3.42680 2.83207 3.33291 10 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 11 0.13590 3.42680 2.83207 3.33291 11 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 12 2.97972 3.63476 0.11214 3.54436 12 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 13 2.97972 3.63476 0.11214 3.54436 13 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 14 3.13583 2.62514 3.18217 0.17125 14 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 15 3.13583 2.62514 3.18217 0.17125 15 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 16 3.13583 2.62514 3.18217 0.17125 16 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 17 3.48665 0.12400 3.53381 2.86782 17 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 18 3.13583 2.62514 3.18217 0.17125 18 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 19 0.13590 3.42680 2.83207 3.33291 19 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 20 3.13583 2.62514 3.18217 0.17125 20 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 21 0.13590 3.42680 2.83207 3.33291 21 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 22 2.97972 3.63476 0.11214 3.54436 22 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 23 2.97972 3.63476 0.11214 3.54436 23 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 24 3.13583 2.62514 3.18217 0.17125 24 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 25 0.13590 3.42680 2.83207 3.33291 25 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 26 0.13590 3.42680 2.83207 3.33291 26 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 27 0.13590 3.42680 2.83207 3.33291 27 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 28 3.48665 0.12400 3.53381 2.86782 28 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 29 3.48665 0.12400 3.53381 2.86782 29 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 30 3.13583 2.62514 3.18217 0.17125 30 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 31 0.63044 2.58447 1.18660 2.44243 31 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 32 3.48665 0.12400 3.53381 2.86782 32 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 33 0.13590 3.42680 2.83207 3.33291 33 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 34 2.97972 3.63476 0.11214 3.54436 34 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 35 0.13590 3.42680 2.83207 3.33291 35 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 36 0.13590 3.42680 2.83207 3.33291 36 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 37 2.97972 3.63476 0.11214 3.54436 37 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 38 2.97972 3.63476 0.11214 3.54436 38 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 39 0.13590 3.42680 2.83207 3.33291 39 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 40 3.13583 2.62514 3.18217 0.17125 40 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 41 3.13583 2.62514 3.18217 0.17125 41 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 42 0.13590 3.42680 2.83207 3.33291 42 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 43 3.13583 2.62514 3.18217 0.17125 43 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 44 3.13583 2.62514 3.18217 0.17125 44 - - 1.38629 1.38629 1.38629 1.38629 0.03590 4.03807 4.03807 1.46634 0.26236 1.09861 0.40547 45 0.13590 3.42680 2.83207 3.33291 45 - - 1.38629 1.38629 1.38629 1.38629 0.01811 4.02028 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threee_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:28 2012 NSEQ 2 EFFN 2.000000 CKSUM 1955491560 STATS LOCAL MSV -7.3656 0.72836 STATS LOCAL VITERBI -8.3251 0.72836 STATS LOCAL FORWARD -3.5373 0.72836 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18285 1.82845 1.36100 1.28545 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threef_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:34 2012 NSEQ 7 EFFN 3.441895 CKSUM 3547224972 STATS LOCAL MSV -7.5895 0.71931 STATS LOCAL VITERBI -7.7812 0.71931 STATS LOCAL FORWARD -4.2241 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13605 1.80814 1.40455 1.31126 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 0.00000 * 1 0.13705 3.41768 2.82617 3.32291 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 2 2.97345 3.62558 0.11310 3.53422 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 3 3.12654 2.61924 3.17324 0.17268 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 4 3.47618 0.12519 3.52379 2.86024 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 5 2.97345 3.62558 0.11310 3.53422 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 6 3.12654 2.61924 3.17324 0.17268 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 7 0.13705 3.41768 2.82617 3.32291 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 8 0.13705 3.41768 2.82617 3.32291 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 9 3.47618 0.12519 3.52379 2.86024 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 10 0.13705 3.41768 2.82617 3.32291 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 11 0.13705 3.41768 2.82617 3.32291 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 12 2.97345 3.62558 0.11310 3.53422 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 13 2.97345 3.62558 0.11310 3.53422 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 14 3.12654 2.61924 3.17324 0.17268 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 15 3.12654 2.61924 3.17324 0.17268 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 16 3.12654 2.61924 3.17324 0.17268 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 17 3.47618 0.12519 3.52379 2.86024 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 18 3.12654 2.61924 3.17324 0.17268 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 19 0.13705 3.41768 2.82617 3.32291 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 20 3.12654 2.61924 3.17324 0.17268 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 21 0.13705 3.41768 2.82617 3.32291 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 22 2.97345 3.62558 0.11310 3.53422 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 23 2.97345 3.62558 0.11310 3.53422 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 24 3.12654 2.61924 3.17324 0.17268 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 25 1.05262 2.56256 0.72406 2.41809 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 26 0.13705 3.41768 2.82617 3.32291 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 27 0.13705 3.41768 2.82617 3.32291 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 28 3.47618 0.12519 3.52379 2.86024 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 29 3.47618 0.12519 3.52379 2.86024 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 30 3.12654 2.61924 3.17324 0.17268 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 31 2.97345 3.62558 0.11310 3.53422 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 32 3.47618 0.12519 3.52379 2.86024 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 33 0.13705 3.41768 2.82617 3.32291 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 34 2.97345 3.62558 0.11310 3.53422 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 35 0.13705 3.41768 2.82617 3.32291 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 36 0.13705 3.41768 2.82617 3.32291 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 37 2.97345 3.62558 0.11310 3.53422 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 38 2.97345 3.62558 0.11310 3.53422 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 39 0.13705 3.41768 2.82617 3.32291 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 40 3.12654 2.61924 3.17324 0.17268 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 41 3.12654 2.61924 3.17324 0.17268 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 42 0.13705 3.41768 2.82617 3.32291 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 43 3.12654 2.61924 3.17324 0.17268 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 44 3.12654 2.61924 3.17324 0.17268 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03280 4.03280 1.46634 0.26236 1.09861 0.40547 45 0.13705 3.41768 2.82617 3.32291 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01492 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threeg_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:40 2012 NSEQ 3 EFFN 3.000000 CKSUM 3041166323 STATS LOCAL MSV -7.9743 0.72060 STATS LOCAL VITERBI -7.7231 0.72060 STATS LOCAL FORWARD -4.1679 0.72060 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.16053 1.89954 1.36697 1.26526 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 0.15719 3.27118 2.73043 3.16274 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.97980 2.52563 3.03204 0.19727 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threeh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:46 2012 NSEQ 5 EFFN 3.442383 CKSUM 2161333903 STATS LOCAL MSV -7.3754 0.71932 STATS LOCAL VITERBI -7.7402 0.71932 STATS LOCAL FORWARD -4.1264 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.20568 1.98234 1.30084 1.23629 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 0.00000 * 1 0.13703 3.41783 2.82627 3.32308 1 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 2 2.97356 3.62574 0.11309 3.53438 2 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 3 3.12669 2.61934 3.17338 0.17266 3 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 4 3.12669 2.61934 3.17338 0.17266 4 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 5 2.97356 3.62574 0.11309 3.53438 5 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 6 3.12669 2.61934 3.17338 0.17266 6 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 7 0.13703 3.41783 2.82627 3.32308 7 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 8 0.13703 3.41783 2.82627 3.32308 8 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 9 3.47635 0.12517 3.52395 2.86037 9 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 10 0.13703 3.41783 2.82627 3.32308 10 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 11 0.13703 3.41783 2.82627 3.32308 11 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 12 2.97356 3.62574 0.11309 3.53438 12 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 13 2.97356 3.62574 0.11309 3.53438 13 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 14 3.12669 2.61934 3.17338 0.17266 14 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 15 3.12669 2.61934 3.17338 0.17266 15 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 16 3.12669 2.61934 3.17338 0.17266 16 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 17 3.47635 0.12517 3.52395 2.86037 17 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 18 3.12669 2.61934 3.17338 0.17266 18 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 19 2.97356 3.62574 0.11309 3.53438 19 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 20 3.12669 2.61934 3.17338 0.17266 20 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 21 0.13703 3.41783 2.82627 3.32308 21 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 22 2.97356 3.62574 0.11309 3.53438 22 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 23 2.97356 3.62574 0.11309 3.53438 23 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 24 3.12669 2.61934 3.17338 0.17266 24 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 25 2.97356 3.62574 0.11309 3.53438 25 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 26 0.13703 3.41783 2.82627 3.32308 26 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 27 0.13703 3.41783 2.82627 3.32308 27 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 28 3.47635 0.12517 3.52395 2.86037 28 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 29 3.47635 0.12517 3.52395 2.86037 29 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 30 3.12669 2.61934 3.17338 0.17266 30 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 31 2.97356 3.62574 0.11309 3.53438 31 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 32 2.45448 0.73156 2.52673 1.04125 32 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 33 0.13703 3.41783 2.82627 3.32308 33 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 34 2.97356 3.62574 0.11309 3.53438 34 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 35 0.13703 3.41783 2.82627 3.32308 35 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 36 0.13703 3.41783 2.82627 3.32308 36 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 37 2.97356 3.62574 0.11309 3.53438 37 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 38 2.97356 3.62574 0.11309 3.53438 38 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 39 0.13703 3.41783 2.82627 3.32308 39 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 40 3.12669 2.61934 3.17338 0.17266 40 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 41 3.12669 2.61934 3.17338 0.17266 41 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 42 0.13703 3.41783 2.82627 3.32308 42 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 43 3.12669 2.61934 3.17338 0.17266 43 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 44 3.12669 2.61934 3.17338 0.17266 44 - - 1.38629 1.38629 1.38629 1.38629 0.03609 4.03289 4.03289 1.46634 0.26236 1.09861 0.40547 45 0.13703 3.41783 2.82627 3.32308 45 - - 1.38629 1.38629 1.38629 1.38629 0.01821 4.01501 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threei_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:52 2012 NSEQ 3 EFFN 3.000000 CKSUM 2535529293 STATS LOCAL MSV -7.9748 0.72090 STATS LOCAL VITERBI -7.7746 0.72090 STATS LOCAL FORWARD -4.2374 0.72090 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.17940 1.79306 1.35318 1.31800 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 0.15719 3.27118 2.73043 3.16274 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.97980 2.52563 3.03204 0.19727 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.97980 2.52563 3.03204 0.19727 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 0.54133 2.56226 1.37841 2.42004 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.15719 3.27118 2.73043 3.16274 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.97980 2.52563 3.03204 0.19727 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threej_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:05:58 2012 NSEQ 4 EFFN 3.691406 CKSUM 4225539494 STATS LOCAL MSV -7.5166 0.71931 STATS LOCAL VITERBI -7.7824 0.71931 STATS LOCAL FORWARD -4.2751 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.11580 2.02418 1.42669 1.20350 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 0.00000 * 1 0.12806 3.49137 2.87366 3.40376 1 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 2 3.02354 3.69924 0.10566 3.61577 2 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 3 3.20221 2.66723 3.24596 0.16140 3 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 4 2.68719 1.57817 2.75090 0.41293 4 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 5 0.84713 2.57557 0.89799 2.43206 5 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 6 3.20221 2.66723 3.24596 0.16140 6 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 7 0.12806 3.49137 2.87366 3.40376 7 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 8 0.12806 3.49137 2.87366 3.40376 8 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 9 3.56062 0.11598 3.60449 2.92094 9 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 10 0.12806 3.49137 2.87366 3.40376 10 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 11 0.12806 3.49137 2.87366 3.40376 11 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 12 3.02354 3.69924 0.10566 3.61577 12 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 13 3.02354 3.69924 0.10566 3.61577 13 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 14 3.20221 2.66723 3.24596 0.16140 14 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 15 3.20221 2.66723 3.24596 0.16140 15 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 16 3.20221 2.66723 3.24596 0.16140 16 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 17 3.56062 0.11598 3.60449 2.92094 17 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 18 3.20221 2.66723 3.24596 0.16140 18 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 19 0.12806 3.49137 2.87366 3.40376 19 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 20 3.20221 2.66723 3.24596 0.16140 20 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 21 0.12806 3.49137 2.87366 3.40376 21 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 22 3.02354 3.69924 0.10566 3.61577 22 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 23 3.02354 3.69924 0.10566 3.61577 23 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 24 3.20221 2.66723 3.24596 0.16140 24 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 25 0.12806 3.49137 2.87366 3.40376 25 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 26 0.12806 3.49137 2.87366 3.40376 26 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 27 0.12806 3.49137 2.87366 3.40376 27 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 28 3.56062 0.11598 3.60449 2.92094 28 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 29 3.56062 0.11598 3.60449 2.92094 29 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 30 3.20221 2.66723 3.24596 0.16140 30 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 31 3.02354 3.69924 0.10566 3.61577 31 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 32 3.20221 2.66723 3.24596 0.16140 32 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 33 1.68271 2.91419 0.35958 2.78204 33 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 34 3.02354 3.69924 0.10566 3.61577 34 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 35 0.12806 3.49137 2.87366 3.40376 35 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 36 0.12806 3.49137 2.87366 3.40376 36 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 37 3.02354 3.69924 0.10566 3.61577 37 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 38 3.02354 3.69924 0.10566 3.61577 38 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 39 0.12806 3.49137 2.87366 3.40376 39 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 40 3.20221 2.66723 3.24596 0.16140 40 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 41 3.20221 2.66723 3.24596 0.16140 41 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 42 0.12806 3.49137 2.87366 3.40376 42 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 43 3.20221 2.66723 3.24596 0.16140 43 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 44 3.20221 2.66723 3.24596 0.16140 44 - - 1.38629 1.38629 1.38629 1.38629 0.03454 4.07608 4.07608 1.46634 0.26236 1.09861 0.40547 45 0.12806 3.49137 2.87366 3.40376 45 - - 1.38629 1.38629 1.38629 1.38629 0.01742 4.05896 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threek_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:06:06 2012 NSEQ 2 EFFN 2.000000 CKSUM 1407147051 STATS LOCAL MSV -7.2036 0.72857 STATS LOCAL VITERBI -8.1048 0.72857 STATS LOCAL FORWARD -3.4860 0.72857 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13655 1.91657 1.41832 1.23841 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threel_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:06:14 2012 NSEQ 4 EFFN 3.613281 CKSUM 3108264336 STATS LOCAL MSV -7.5996 0.71932 STATS LOCAL VITERBI -7.8269 0.71932 STATS LOCAL FORWARD -4.0756 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.05723 2.13065 1.49937 1.16941 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 0.00000 * 1 0.13072 3.46895 2.85924 3.37914 1 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 2 3.00842 3.67695 0.10785 3.59106 2 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 3 3.17904 2.65254 3.22370 0.16476 3 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 4 2.45641 0.93977 2.52788 0.81258 4 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 5 3.00842 3.67695 0.10785 3.59106 5 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 6 3.17904 2.65254 3.22370 0.16476 6 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 7 0.13072 3.46895 2.85924 3.37914 7 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 8 0.13072 3.46895 2.85924 3.37914 8 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 9 3.17904 2.65254 3.22370 0.16476 9 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 10 0.13072 3.46895 2.85924 3.37914 10 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 11 0.13072 3.46895 2.85924 3.37914 11 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 12 3.00842 3.67695 0.10785 3.59106 12 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 13 3.00842 3.67695 0.10785 3.59106 13 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 14 3.17904 2.65254 3.22370 0.16476 14 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 15 3.17904 2.65254 3.22370 0.16476 15 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 16 3.17904 2.65254 3.22370 0.16476 16 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 17 3.53498 0.11869 3.58001 2.90259 17 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 18 3.17904 2.65254 3.22370 0.16476 18 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 19 0.13072 3.46895 2.85924 3.37914 19 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 20 3.17904 2.65254 3.22370 0.16476 20 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 21 0.13072 3.46895 2.85924 3.37914 21 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 22 3.00842 3.67695 0.10785 3.59106 22 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 23 3.00842 3.67695 0.10785 3.59106 23 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 24 3.17904 2.65254 3.22370 0.16476 24 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 25 0.38000 2.83178 1.66010 2.70146 25 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 26 0.13072 3.46895 2.85924 3.37914 26 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 27 0.13072 3.46895 2.85924 3.37914 27 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 28 3.53498 0.11869 3.58001 2.90259 28 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 29 3.53498 0.11869 3.58001 2.90259 29 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 30 3.17904 2.65254 3.22370 0.16476 30 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 31 0.13072 3.46895 2.85924 3.37914 31 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 32 3.17904 2.65254 3.22370 0.16476 32 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 33 0.13072 3.46895 2.85924 3.37914 33 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 34 3.00842 3.67695 0.10785 3.59106 34 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 35 0.13072 3.46895 2.85924 3.37914 35 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 36 0.13072 3.46895 2.85924 3.37914 36 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 37 3.00842 3.67695 0.10785 3.59106 37 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 38 3.00842 3.67695 0.10785 3.59106 38 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 39 0.13072 3.46895 2.85924 3.37914 39 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 40 3.17904 2.65254 3.22370 0.16476 40 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 41 3.17904 2.65254 3.22370 0.16476 41 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 42 0.13072 3.46895 2.85924 3.37914 42 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 43 3.17904 2.65254 3.22370 0.16476 43 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 44 3.17904 2.65254 3.22370 0.16476 44 - - 1.38629 1.38629 1.38629 1.38629 0.03501 4.06273 4.06273 1.46634 0.26236 1.09861 0.40547 45 0.13072 3.46895 2.85924 3.37914 45 - - 1.38629 1.38629 1.38629 1.38629 0.01766 4.04538 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_threem_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:06:19 2012 NSEQ 2 EFFN 2.000000 CKSUM 3864954940 STATS LOCAL MSV -7.4586 0.72853 STATS LOCAL VITERBI -8.4340 0.72853 STATS LOCAL FORWARD -3.5240 0.72853 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.09390 1.82613 1.48235 1.28391 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:04:41 2012 NSEQ 2 EFFN 2.000000 CKSUM 4015792314 STATS LOCAL MSV -7.2796 0.72845 STATS LOCAL VITERBI -8.1289 0.72845 STATS LOCAL FORWARD -3.5183 0.72845 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.13757 1.82637 1.41961 1.28519 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.23862 2.84929 2.43386 2.70756 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.23862 2.84929 2.43386 2.70756 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.23862 2.84929 2.43386 2.70756 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Fungi_Ge_1_SSU_end_zero_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Feb 14 23:10:48 2012 NSEQ 379 EFFN 3.813942 CKSUM 3504503792 STATS LOCAL MSV -7.0792 0.71932 STATS LOCAL VITERBI -7.5496 0.71932 STATS LOCAL FORWARD -4.0463 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.15435 1.80006 1.18618 1.54149 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 0.00000 * 1 0.14425 3.29860 2.79157 3.32230 1 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 2 2.65011 2.36329 0.25126 2.85732 2 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 3 0.16976 3.17643 2.78392 2.94499 3 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 4 0.14813 3.18012 2.83686 3.28375 4 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 5 0.12413 3.52540 2.89552 3.44114 5 - - 1.38629 1.38629 1.38629 1.38629 0.04793 4.09667 3.50082 1.46634 0.26236 1.09861 0.40547 6 3.03129 3.71070 0.10455 3.62847 6 - - 1.38629 1.38629 1.38629 1.38629 0.03429 4.08303 4.08303 1.46634 0.26236 0.74298 0.64568 7 3.20211 2.59408 3.24588 0.16762 7 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 8 2.83020 3.64242 0.12073 3.55658 8 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 9 3.23761 2.68967 3.27997 0.15641 9 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 10 0.14008 3.28236 2.85600 3.33335 10 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 11 0.16511 2.99542 2.79810 3.18785 11 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 12 3.18479 0.14047 3.45034 2.84850 12 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 13 0.15234 3.13071 2.82703 3.25889 13 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 14 0.14288 3.45121 2.70633 3.36237 14 - - 1.38629 1.38629 1.38629 1.38629 0.03888 4.09667 3.83965 1.46634 0.26236 1.09861 0.40547 15 3.04095 3.72498 0.10319 3.64431 15 - - 1.38629 1.38629 1.38629 1.38629 0.03399 4.09178 4.09178 1.46634 0.26236 0.93480 0.49867 16 3.04628 3.73288 0.10244 3.65308 16 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 17 2.90839 1.94742 2.96451 0.28607 17 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 18 3.23761 2.68967 3.27997 0.15641 18 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 19 3.59941 0.11201 3.64153 2.94860 19 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 20 3.59941 0.11201 3.64153 2.94860 20 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 21 3.04628 3.73288 0.10244 3.65308 21 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 22 3.14021 2.65394 3.04919 0.17560 22 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 23 0.18261 3.21237 2.75977 2.75926 23 - - 1.38629 1.38629 1.38629 1.38629 0.12306 4.09667 2.31102 1.46634 0.26236 1.09861 0.40547 24 2.82376 3.52989 0.12899 3.43199 24 - - 1.38629 1.38629 1.38629 1.38629 0.03692 4.01053 4.01053 1.46634 0.26236 0.28921 1.38171 25 3.04628 3.73288 0.10244 3.65308 25 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 26 3.23761 2.68967 3.27997 0.15641 26 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 27 3.04628 3.73288 0.10244 3.65308 27 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 28 0.12413 3.52540 2.89552 3.44114 28 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 29 0.12413 3.52540 2.89552 3.44114 29 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 30 3.59941 0.11201 3.64153 2.94860 30 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 31 2.64158 2.58212 3.01644 0.21795 31 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 32 3.04628 3.73288 0.10244 3.65308 32 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 33 3.59941 0.11201 3.64153 2.94860 33 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 34 2.46518 3.45088 0.16463 3.35020 34 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 35 3.04628 3.73288 0.10244 3.65308 35 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 36 0.19153 3.28257 2.35158 3.18081 36 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 37 3.00440 3.49743 0.11490 3.55084 37 - - 1.38629 1.38629 1.38629 1.38629 0.04146 4.09667 3.73045 1.46634 0.26236 1.09861 0.40547 38 3.03820 3.72092 0.10357 3.63981 38 - - 1.38629 1.38629 1.38629 1.38629 0.03408 4.08928 4.08928 1.46634 0.26236 0.86991 0.54298 39 0.12413 3.52540 2.89552 3.44114 39 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 40 3.23761 2.68967 3.27997 0.15641 40 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 41 3.59941 0.11201 3.64153 2.94860 41 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 42 0.12413 3.52540 2.89552 3.44114 42 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 43 2.31158 2.38209 2.68058 0.30108 43 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 44 2.84371 2.53111 2.45551 0.25309 44 - - 1.38629 1.38629 1.38629 1.38629 0.03382 4.09667 4.09667 1.46634 0.26236 1.09861 0.40547 45 0.21716 2.66765 2.60423 2.95989 45 - - 1.38629 1.38629 1.38629 1.38629 0.01705 4.07990 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Fungi_Ge_58S_end_missinged_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Nov 14 23:18:15 2012 NSEQ 22 EFFN 3.413330 CKSUM 3038122402 STATS LOCAL MSV -7.3491 0.71932 STATS LOCAL VITERBI -7.8495 0.71932 STATS LOCAL FORWARD -4.1426 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.48189 1.44028 1.44954 1.19981 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 0.00000 * 1 3.46602 0.12635 3.51407 2.85290 1 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 2 0.13818 3.40885 2.82046 3.31324 2 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 3 3.11756 2.61354 3.16460 0.17408 3 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 4 0.13818 3.40885 2.82046 3.31324 4 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 5 3.46602 0.12635 3.51407 2.85290 5 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 6 2.96737 3.61668 0.11404 3.52437 6 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 7 2.96737 3.61668 0.11404 3.52437 7 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 8 3.46602 0.12635 3.51407 2.85290 8 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 9 0.13818 3.40885 2.82046 3.31324 9 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 10 3.46602 0.12635 3.51407 2.85290 10 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 11 2.94834 2.22083 3.00172 0.23654 11 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 12 2.96737 3.61668 0.11404 3.52437 12 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 13 3.11756 2.61354 3.16460 0.17408 13 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 14 0.13818 3.40885 2.82046 3.31324 14 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 15 3.46602 0.12635 3.51407 2.85290 15 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 16 3.11756 2.61354 3.16460 0.17408 16 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 17 3.11756 2.61354 3.16460 0.17408 17 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 18 2.96737 3.61668 0.11404 3.52437 18 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 19 3.11756 2.61354 3.16460 0.17408 19 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 20 0.13818 3.40885 2.82046 3.31324 20 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 21 3.46602 0.12635 3.51407 2.85290 21 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 22 0.23741 3.08623 2.16801 2.97104 22 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 23 2.96737 3.61668 0.11404 3.52437 23 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 24 3.11756 2.61354 3.16460 0.17408 24 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 25 0.13818 3.40885 2.82046 3.31324 25 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 26 2.96737 3.61668 0.11404 3.52437 26 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 27 2.96737 3.61668 0.11404 3.52437 27 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 28 3.11756 2.61354 3.16460 0.17408 28 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 29 3.46602 0.12635 3.51407 2.85290 29 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 30 3.11756 2.61354 3.16460 0.17408 30 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 31 2.96737 3.61668 0.11404 3.52437 31 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 32 3.11756 2.61354 3.16460 0.17408 32 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 33 2.94834 2.22083 3.00172 0.23654 33 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 34 3.11756 2.61354 3.16460 0.17408 34 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 35 3.46602 0.12635 3.51407 2.85290 35 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 36 0.13818 3.40885 2.82046 3.31324 36 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 37 2.96737 3.61668 0.11404 3.52437 37 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 38 0.13818 3.40885 2.82046 3.31324 38 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 39 2.96737 3.61668 0.11404 3.52437 39 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 40 3.11756 2.61354 3.16460 0.17408 40 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 41 3.46602 0.12635 3.51407 2.85290 41 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 42 0.13818 3.40885 2.82046 3.31324 42 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 43 3.46602 0.12635 3.51407 2.85290 43 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 44 3.11756 2.61354 3.16460 0.17408 44 - - 1.38629 1.38629 1.38629 1.38629 0.03628 4.02773 4.02773 1.46634 0.26236 1.09861 0.40547 45 3.11756 2.61354 3.16460 0.17408 45 - - 1.38629 1.38629 1.38629 1.38629 0.01830 4.00975 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:29:42 2013 NSEQ 4 EFFN 3.292969 CKSUM 3324117154 STATS LOCAL MSV -8.0427 0.71931 STATS LOCAL VITERBI -7.6586 0.71931 STATS LOCAL FORWARD -3.9717 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.63203 1.52553 1.25312 1.19948 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 0.00000 * 1 2.94085 3.57805 0.11823 3.48171 1 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 2 3.42209 0.13153 3.47201 2.82097 2 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 3 0.14316 3.37070 2.79571 3.27146 3 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 4 3.42209 0.13153 3.47201 2.82097 4 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 5 3.07897 2.58901 3.12749 0.18024 5 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 6 3.42209 0.13153 3.47201 2.82097 6 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 7 3.07897 2.58901 3.12749 0.18024 7 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 8 3.42209 0.13153 3.47201 2.82097 8 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 9 3.07897 2.58901 3.12749 0.18024 9 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 10 2.94085 3.57805 0.11823 3.48171 10 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 11 2.94085 3.57805 0.11823 3.48171 11 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 12 3.07897 2.58901 3.12749 0.18024 12 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 13 0.14316 3.37070 2.79571 3.27146 13 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 14 3.07897 2.58901 3.12749 0.18024 14 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 15 3.07897 2.58901 3.12749 0.18024 15 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 16 3.42209 0.13153 3.47201 2.82097 16 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 17 3.42209 0.13153 3.47201 2.82097 17 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 18 2.94085 3.57805 0.11823 3.48171 18 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 19 2.94085 3.57805 0.11823 3.48171 19 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 20 0.14316 3.37070 2.79571 3.27146 20 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 21 2.94085 3.57805 0.11823 3.48171 21 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 22 0.14316 3.37070 2.79571 3.27146 22 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 23 2.94085 3.57805 0.11823 3.48171 23 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 24 3.07897 2.58901 3.12749 0.18024 24 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 25 0.14316 3.37070 2.79571 3.27146 25 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 26 3.07897 2.58901 3.12749 0.18024 26 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 27 2.94085 3.57805 0.11823 3.48171 27 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 28 3.42209 0.13153 3.47201 2.82097 28 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 29 3.42209 0.13153 3.47201 2.82097 29 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 30 3.07897 2.58901 3.12749 0.18024 30 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 31 2.94085 3.57805 0.11823 3.48171 31 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 32 3.07897 2.58901 3.12749 0.18024 32 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 33 3.07897 2.58901 3.12749 0.18024 33 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 34 3.07897 2.58901 3.12749 0.18024 34 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 35 2.94085 3.57805 0.11823 3.48171 35 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 36 0.14316 3.37070 2.79571 3.27146 36 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 37 2.94085 3.57805 0.11823 3.48171 37 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 38 2.94085 3.57805 0.11823 3.48171 38 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 39 2.94085 3.57805 0.11823 3.48171 39 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 40 3.07897 2.58901 3.12749 0.18024 40 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 41 3.42209 0.13153 3.47201 2.82097 41 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 42 0.14316 3.37070 2.79571 3.27146 42 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 43 0.14316 3.37070 2.79571 3.27146 43 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 44 3.07897 2.58901 3.12749 0.18024 44 - - 1.38629 1.38629 1.38629 1.38629 0.03709 4.00605 4.00605 1.46634 0.26236 1.09861 0.40547 45 3.07897 2.58901 3.12749 0.18024 45 - - 1.38629 1.38629 1.38629 1.38629 0.01872 3.98768 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:29:03 2013 NSEQ 4 EFFN 3.605469 CKSUM 201117745 STATS LOCAL MSV -7.2058 0.71933 STATS LOCAL VITERBI -7.7450 0.71933 STATS LOCAL FORWARD -3.8320 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.77521 1.48324 1.16622 1.23063 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 0.00000 * 1 3.00689 3.67468 0.10808 3.58855 1 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 2 3.53238 0.11897 3.57752 2.90072 2 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 3 0.13100 3.46667 2.85777 3.37664 3 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 4 3.53238 0.11897 3.57752 2.90072 4 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 5 3.17670 2.65106 3.22145 0.16511 5 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 6 3.17670 2.65106 3.22145 0.16511 6 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 7 3.53238 0.11897 3.57752 2.90072 7 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 8 3.53238 0.11897 3.57752 2.90072 8 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 9 2.66454 1.57155 2.72875 0.41955 9 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 10 3.00689 3.67468 0.10808 3.58855 10 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 11 3.00689 3.67468 0.10808 3.58855 11 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 12 2.45592 0.95757 2.52731 0.79736 12 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 13 0.13100 3.46667 2.85777 3.37664 13 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 14 3.17670 2.65106 3.22145 0.16511 14 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 15 3.17670 2.65106 3.22145 0.16511 15 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 16 3.53238 0.11897 3.57752 2.90072 16 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 17 3.53238 0.11897 3.57752 2.90072 17 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 18 3.00689 3.67468 0.10808 3.58855 18 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 19 3.00689 3.67468 0.10808 3.58855 19 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 20 3.00689 3.67468 0.10808 3.58855 20 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 21 0.84065 2.56165 0.91063 2.41776 21 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 22 0.13100 3.46667 2.85777 3.37664 22 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 23 3.00689 3.67468 0.10808 3.58855 23 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 24 3.17670 2.65106 3.22145 0.16511 24 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 25 0.13100 3.46667 2.85777 3.37664 25 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 26 3.17670 2.65106 3.22145 0.16511 26 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 27 3.00689 3.67468 0.10808 3.58855 27 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 28 3.53238 0.11897 3.57752 2.90072 28 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 29 3.53238 0.11897 3.57752 2.90072 29 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 30 3.17670 2.65106 3.22145 0.16511 30 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 31 3.00689 3.67468 0.10808 3.58855 31 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 32 3.17670 2.65106 3.22145 0.16511 32 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 33 3.17670 2.65106 3.22145 0.16511 33 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 34 3.17670 2.65106 3.22145 0.16511 34 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 35 3.00689 3.67468 0.10808 3.58855 35 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 36 0.13100 3.46667 2.85777 3.37664 36 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 37 3.00689 3.67468 0.10808 3.58855 37 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 38 3.00689 3.67468 0.10808 3.58855 38 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 39 3.00689 3.67468 0.10808 3.58855 39 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 40 3.17670 2.65106 3.22145 0.16511 40 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 41 3.53238 0.11897 3.57752 2.90072 41 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 42 0.13100 3.46667 2.85777 3.37664 42 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 43 3.00689 3.67468 0.10808 3.58855 43 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 44 3.17670 2.65106 3.22145 0.16511 44 - - 1.38629 1.38629 1.38629 1.38629 0.03506 4.06139 4.06139 1.46634 0.26236 1.09861 0.40547 45 3.17670 2.65106 3.22145 0.16511 45 - - 1.38629 1.38629 1.38629 1.38629 0.01768 4.04401 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:33:21 2013 NSEQ 12 EFFN 3.377930 CKSUM 584611421 STATS LOCAL MSV -7.4883 0.71932 STATS LOCAL VITERBI -7.6298 0.71932 STATS LOCAL FORWARD -4.1379 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74512 1.13129 1.33907 1.42433 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 0.00000 * 1 3.45329 0.12783 3.50189 2.84367 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 2 2.95971 3.60551 0.11524 3.51203 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 3 3.45329 0.12783 3.50189 2.84367 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 4 3.45329 0.12783 3.50189 2.84367 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 5 3.45329 0.12783 3.50189 2.84367 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 6 3.10634 2.60641 3.15381 0.17585 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 7 3.45329 0.12783 3.50189 2.84367 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 8 3.10634 2.60641 3.15381 0.17585 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 9 2.95971 3.60551 0.11524 3.51203 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 10 2.95971 3.60551 0.11524 3.51203 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 11 3.10634 2.60641 3.15381 0.17585 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 12 3.10634 2.60641 3.15381 0.17585 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 13 0.13960 3.39779 2.81330 3.30112 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 14 3.10634 2.60641 3.15381 0.17585 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 15 3.45329 0.12783 3.50189 2.84367 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 16 3.45329 0.12783 3.50189 2.84367 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 17 3.45329 0.12783 3.50189 2.84367 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 18 0.29894 2.93706 1.92867 2.81290 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 19 2.95971 3.60551 0.11524 3.51203 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 20 0.13960 3.39779 2.81330 3.30112 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 21 2.95971 3.60551 0.11524 3.51203 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 22 2.95971 3.60551 0.11524 3.51203 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 23 2.95971 3.60551 0.11524 3.51203 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 24 3.45329 0.12783 3.50189 2.84367 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 25 0.13960 3.39779 2.81330 3.30112 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 26 3.45329 0.12783 3.50189 2.84367 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 27 3.10634 2.60641 3.15381 0.17585 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 28 3.45329 0.12783 3.50189 2.84367 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 29 3.10634 2.60641 3.15381 0.17585 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 30 3.10634 2.60641 3.15381 0.17585 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 31 2.95971 3.60551 0.11524 3.51203 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 32 3.10634 2.60641 3.15381 0.17585 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 33 3.10634 2.60641 3.15381 0.17585 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 34 3.10634 2.60641 3.15381 0.17585 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 35 2.95971 3.60551 0.11524 3.51203 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 36 0.13960 3.39779 2.81330 3.30112 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 37 0.13960 3.39779 2.81330 3.30112 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 38 2.95971 3.60551 0.11524 3.51203 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 39 3.45329 0.12783 3.50189 2.84367 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 40 3.45329 0.12783 3.50189 2.84367 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 41 3.45329 0.12783 3.50189 2.84367 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 42 3.45329 0.12783 3.50189 2.84367 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 43 2.95971 3.60551 0.11524 3.51203 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 44 2.26187 1.68897 0.49515 2.28615 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 45 0.13960 3.39779 2.81330 3.30112 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00331 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:29:52 2013 NSEQ 5 EFFN 3.227539 CKSUM 3028426393 STATS LOCAL MSV -8.0930 0.71931 STATS LOCAL VITERBI -7.8302 0.71931 STATS LOCAL FORWARD -3.9466 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82157 1.31741 1.20163 1.31046 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 0.00000 * 1 3.39741 0.13455 3.44837 2.80294 1 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 2 0.14605 3.34931 2.78177 3.24806 2 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 3 3.39741 0.13455 3.44837 2.80294 3 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 4 3.05748 2.57532 3.10682 0.18378 4 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 5 3.39741 0.13455 3.44837 2.80294 5 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 6 3.05748 2.57532 3.10682 0.18378 6 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 7 3.39741 0.13455 3.44837 2.80294 7 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 8 3.39741 0.13455 3.44837 2.80294 8 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 9 2.92582 3.55626 0.12066 3.45768 9 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 10 2.92582 3.55626 0.12066 3.45768 10 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 11 3.05748 2.57532 3.10682 0.18378 11 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 12 3.05748 2.57532 3.10682 0.18378 12 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 13 3.05748 2.57532 3.10682 0.18378 13 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 14 3.05748 2.57532 3.10682 0.18378 14 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 15 3.39741 0.13455 3.44837 2.80294 15 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 16 3.39741 0.13455 3.44837 2.80294 16 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 17 2.92582 3.55626 0.12066 3.45768 17 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 18 2.92582 3.55626 0.12066 3.45768 18 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 19 2.92582 3.55626 0.12066 3.45768 19 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 20 0.14605 3.34931 2.78177 3.24806 20 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 21 2.92582 3.55626 0.12066 3.45768 21 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 22 0.14605 3.34931 2.78177 3.24806 22 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 23 2.92582 3.55626 0.12066 3.45768 23 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 24 3.05748 2.57532 3.10682 0.18378 24 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 25 0.14605 3.34931 2.78177 3.24806 25 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 26 3.05748 2.57532 3.10682 0.18378 26 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 27 2.92582 3.55626 0.12066 3.45768 27 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 28 3.39741 0.13455 3.44837 2.80294 28 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 29 3.39741 0.13455 3.44837 2.80294 29 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 30 3.05748 2.57532 3.10682 0.18378 30 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 31 2.92582 3.55626 0.12066 3.45768 31 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 32 3.05748 2.57532 3.10682 0.18378 32 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 33 3.05748 2.57532 3.10682 0.18378 33 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 34 3.05748 2.57532 3.10682 0.18378 34 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 35 2.92582 3.55626 0.12066 3.45768 35 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 36 0.14605 3.34931 2.78177 3.24806 36 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 37 2.92582 3.55626 0.12066 3.45768 37 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 38 2.92582 3.55626 0.12066 3.45768 38 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 39 2.92582 3.55626 0.12066 3.45768 39 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 40 3.05748 2.57532 3.10682 0.18378 40 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 41 3.39741 0.13455 3.44837 2.80294 41 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 42 0.14605 3.34931 2.78177 3.24806 42 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 43 2.92582 3.55626 0.12066 3.45768 43 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 44 3.39741 0.13455 3.44837 2.80294 44 - - 1.38629 1.38629 1.38629 1.38629 0.03755 3.99407 3.99407 1.46634 0.26236 1.09861 0.40547 45 3.39741 0.13455 3.44837 2.80294 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97547 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:29:31 2013 NSEQ 3 EFFN 3.000000 CKSUM 3010397561 STATS LOCAL MSV -8.0548 0.72023 STATS LOCAL VITERBI -7.8892 0.72023 STATS LOCAL FORWARD -3.8604 0.72023 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81055 1.31924 1.20347 1.31324 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.15719 3.27118 2.73043 3.16274 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.97980 2.52563 3.03204 0.19727 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 3.30705 0.14631 3.36166 2.73626 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:29:19 2013 NSEQ 3 EFFN 3.000000 CKSUM 1065676441 STATS LOCAL MSV -7.9459 0.72043 STATS LOCAL VITERBI -7.8914 0.72043 STATS LOCAL FORWARD -3.7562 0.72043 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80596 1.31067 1.14440 1.39582 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 3.30705 0.14631 3.36166 2.73626 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.43088 1.34923 2.50068 0.56112 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.86982 3.47591 0.13017 3.36931 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.97980 2.52563 3.03204 0.19727 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:33:07 2013 NSEQ 2 EFFN 2.000000 CKSUM 1917556334 STATS LOCAL MSV -7.3634 0.73055 STATS LOCAL VITERBI -8.4593 0.73055 STATS LOCAL FORWARD -3.4958 0.73055 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.42369 1.60106 1.53288 1.07417 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.23862 2.84929 2.43386 2.70756 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 1.89532 1.96405 1.06955 1.00436 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.23862 2.84929 2.43386 2.70756 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.01448 1.11006 1.95471 1.79419 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_eightytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:32:59 2013 NSEQ 16 EFFN 3.277344 CKSUM 3906241751 STATS LOCAL MSV -8.2518 0.71933 STATS LOCAL VITERBI -7.9149 0.71933 STATS LOCAL FORWARD -3.9751 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.55172 1.45115 1.31524 1.25385 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 0.00000 * 1 3.41625 0.13224 3.46642 2.81671 1 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 2 2.93730 3.57289 0.11880 3.47603 2 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 3 2.93730 3.57289 0.11880 3.47603 3 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 4 3.41625 0.13224 3.46642 2.81671 4 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 5 0.14384 3.36564 2.79241 3.26592 5 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 6 3.41625 0.13224 3.46642 2.81671 6 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 7 3.07387 2.58576 3.12259 0.18107 7 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 8 0.14384 3.36564 2.79241 3.26592 8 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 9 3.41625 0.13224 3.46642 2.81671 9 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 10 3.07387 2.58576 3.12259 0.18107 10 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 11 2.93730 3.57289 0.11880 3.47603 11 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 12 3.41625 0.13224 3.46642 2.81671 12 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 13 2.93730 3.57289 0.11880 3.47603 13 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 14 3.07387 2.58576 3.12259 0.18107 14 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 15 2.93730 3.57289 0.11880 3.47603 15 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 16 0.14384 3.36564 2.79241 3.26592 16 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 17 2.93730 3.57289 0.11880 3.47603 17 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 18 3.41625 0.13224 3.46642 2.81671 18 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 19 0.14384 3.36564 2.79241 3.26592 19 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 20 2.93730 3.57289 0.11880 3.47603 20 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 21 3.07387 2.58576 3.12259 0.18107 21 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 22 0.14384 3.36564 2.79241 3.26592 22 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 23 2.93730 3.57289 0.11880 3.47603 23 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 24 3.07387 2.58576 3.12259 0.18107 24 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 25 0.14384 3.36564 2.79241 3.26592 25 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 26 2.93730 3.57289 0.11880 3.47603 26 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 27 2.93730 3.57289 0.11880 3.47603 27 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 28 3.07387 2.58576 3.12259 0.18107 28 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 29 3.41625 0.13224 3.46642 2.81671 29 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 30 3.07387 2.58576 3.12259 0.18107 30 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 31 2.93730 3.57289 0.11880 3.47603 31 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 32 3.07387 2.58576 3.12259 0.18107 32 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 33 3.07387 2.58576 3.12259 0.18107 33 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 34 3.07387 2.58576 3.12259 0.18107 34 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 35 3.41625 0.13224 3.46642 2.81671 35 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 36 0.14384 3.36564 2.79241 3.26592 36 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 37 2.93730 3.57289 0.11880 3.47603 37 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 38 3.07387 2.58576 3.12259 0.18107 38 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 39 3.41625 0.13224 3.46642 2.81671 39 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 40 3.07387 2.58576 3.12259 0.18107 40 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 41 3.41625 0.13224 3.46642 2.81671 41 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 42 0.14384 3.36564 2.79241 3.26592 42 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 43 0.14384 3.36564 2.79241 3.26592 43 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 44 3.07387 2.58576 3.12259 0.18107 44 - - 1.38629 1.38629 1.38629 1.38629 0.03720 4.00321 4.00321 1.46634 0.26236 1.09861 0.40547 45 3.07387 2.58576 3.12259 0.18107 45 - - 1.38629 1.38629 1.38629 1.38629 0.01877 3.98478 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninety_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:30:08 2013 NSEQ 2 EFFN 2.000000 CKSUM 3491520532 STATS LOCAL MSV -7.1883 0.72975 STATS LOCAL VITERBI -8.2289 0.72975 STATS LOCAL FORWARD -3.5844 0.72975 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.48574 1.54128 1.36625 1.18909 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23862 2.84929 2.43386 2.70756 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.15554 1.00938 2.23102 0.88601 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 1.03732 1.95876 1.96551 1.00928 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetyeight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:31:54 2013 NSEQ 5 EFFN 3.325195 CKSUM 3444520400 STATS LOCAL MSV -8.0897 0.71934 STATS LOCAL VITERBI -7.7396 0.71934 STATS LOCAL FORWARD -3.9429 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54813 1.47281 1.25061 1.30289 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 0.00000 * 1 2.94809 3.58857 0.11707 3.49333 1 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 2 3.43404 0.13010 3.48346 2.82967 2 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 3 0.14179 3.38107 2.80245 3.28281 3 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 4 3.43404 0.13010 3.48346 2.82967 4 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 5 3.08942 2.59566 3.13755 0.17855 5 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 6 3.43404 0.13010 3.48346 2.82967 6 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 7 2.74634 0.36791 2.81422 1.69440 7 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 8 3.08942 2.59566 3.13755 0.17855 8 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 9 3.08942 2.59566 3.13755 0.17855 9 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 10 2.94809 3.58857 0.11707 3.49333 10 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 11 2.94809 3.58857 0.11707 3.49333 11 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 12 3.08942 2.59566 3.13755 0.17855 12 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 13 0.14179 3.38107 2.80245 3.28281 13 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 14 3.08942 2.59566 3.13755 0.17855 14 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 15 3.08942 2.59566 3.13755 0.17855 15 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 16 3.43404 0.13010 3.48346 2.82967 16 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 17 3.43404 0.13010 3.48346 2.82967 17 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 18 2.94809 3.58857 0.11707 3.49333 18 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 19 0.14179 3.38107 2.80245 3.28281 19 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 20 2.94809 3.58857 0.11707 3.49333 20 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 21 2.94809 3.58857 0.11707 3.49333 21 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 22 0.14179 3.38107 2.80245 3.28281 22 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 23 2.94809 3.58857 0.11707 3.49333 23 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 24 3.08942 2.59566 3.13755 0.17855 24 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 25 0.14179 3.38107 2.80245 3.28281 25 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 26 3.43404 0.13010 3.48346 2.82967 26 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 27 0.14179 3.38107 2.80245 3.28281 27 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 28 3.43404 0.13010 3.48346 2.82967 28 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 29 0.14179 3.38107 2.80245 3.28281 29 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 30 3.08942 2.59566 3.13755 0.17855 30 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 31 2.94809 3.58857 0.11707 3.49333 31 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 32 3.43404 0.13010 3.48346 2.82967 32 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 33 3.08942 2.59566 3.13755 0.17855 33 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 34 3.08942 2.59566 3.13755 0.17855 34 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 35 2.94809 3.58857 0.11707 3.49333 35 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 36 0.14179 3.38107 2.80245 3.28281 36 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 37 2.94809 3.58857 0.11707 3.49333 37 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 38 2.94809 3.58857 0.11707 3.49333 38 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 39 2.94809 3.58857 0.11707 3.49333 39 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 40 3.08942 2.59566 3.13755 0.17855 40 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 41 3.43404 0.13010 3.48346 2.82967 41 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 42 0.14179 3.38107 2.80245 3.28281 42 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 43 2.94809 3.58857 0.11707 3.49333 43 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 44 3.08942 2.59566 3.13755 0.17855 44 - - 1.38629 1.38629 1.38629 1.38629 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547 45 3.08942 2.59566 3.13755 0.17855 45 - - 1.38629 1.38629 1.38629 1.38629 0.01860 3.99364 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetyfive_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:31:07 2013 NSEQ 4 EFFN 3.378906 CKSUM 1392573870 STATS LOCAL MSV -7.2841 0.71933 STATS LOCAL VITERBI -7.7292 0.71933 STATS LOCAL FORWARD -3.8558 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.80391 1.60400 1.15260 1.14432 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 0.00000 * 1 2.95993 3.60582 0.11520 3.51237 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 2 3.45365 0.12778 3.50223 2.84393 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 3 0.13956 3.39810 2.81350 3.30145 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 4 3.45365 0.12778 3.50223 2.84393 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 5 3.10665 2.60661 3.15411 0.17580 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 6 3.10665 2.60661 3.15411 0.17580 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 7 3.45365 0.12778 3.50223 2.84393 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 8 3.10665 2.60661 3.15411 0.17580 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 9 3.10665 2.60661 3.15411 0.17580 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 10 2.95993 3.60582 0.11520 3.51237 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 11 2.95993 3.60582 0.11520 3.51237 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 12 3.10665 2.60661 3.15411 0.17580 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 13 0.13956 3.39810 2.81350 3.30145 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 14 3.10665 2.60661 3.15411 0.17580 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 15 3.10665 2.60661 3.15411 0.17580 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 16 3.45365 0.12778 3.50223 2.84393 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 17 3.45365 0.12778 3.50223 2.84393 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 18 2.95993 3.60582 0.11520 3.51237 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 19 0.13956 3.39810 2.81350 3.30145 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 20 2.95993 3.60582 0.11520 3.51237 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 21 2.95993 3.60582 0.11520 3.51237 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 22 0.13956 3.39810 2.81350 3.30145 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 23 2.95993 3.60582 0.11520 3.51237 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 24 3.10665 2.60661 3.15411 0.17580 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 25 0.13956 3.39810 2.81350 3.30145 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 26 3.10665 2.60661 3.15411 0.17580 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 27 1.65972 2.83520 0.37998 2.69972 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 28 3.45365 0.12778 3.50223 2.84393 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 29 3.10665 2.60661 3.15411 0.17580 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 30 3.10665 2.60661 3.15411 0.17580 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 31 2.95993 3.60582 0.11520 3.51237 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 32 3.45365 0.12778 3.50223 2.84393 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 33 3.10665 2.60661 3.15411 0.17580 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 34 3.10665 2.60661 3.15411 0.17580 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 35 2.95993 3.60582 0.11520 3.51237 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 36 0.13956 3.39810 2.81350 3.30145 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 37 2.95993 3.60582 0.11520 3.51237 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 38 2.95993 3.60582 0.11520 3.51237 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 39 2.95993 3.60582 0.11520 3.51237 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 40 3.10665 2.60661 3.15411 0.17580 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 41 3.10665 2.60661 3.15411 0.17580 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 42 2.95993 3.60582 0.11520 3.51237 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 43 2.95993 3.60582 0.11520 3.51237 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 44 3.10665 2.60661 3.15411 0.17580 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02158 4.02158 1.46634 0.26236 1.09861 0.40547 45 3.45365 0.12778 3.50223 2.84393 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00349 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetyfour_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:30:59 2013 NSEQ 2 EFFN 2.000000 CKSUM 2850641770 STATS LOCAL MSV -7.2796 0.72853 STATS LOCAL VITERBI -8.3400 0.72853 STATS LOCAL FORWARD -3.2036 0.72853 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58101 1.49322 1.20911 1.30519 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.15554 1.00938 2.23102 0.88601 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetynine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:32:03 2013 NSEQ 3 EFFN 3.000000 CKSUM 2665187683 STATS LOCAL MSV -7.9238 0.72047 STATS LOCAL VITERBI -7.7225 0.72047 STATS LOCAL FORWARD -3.8204 0.72047 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54102 1.69362 1.19338 1.20801 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 0.15719 3.27118 2.73043 3.16274 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.97980 2.52563 3.03204 0.19727 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.15719 3.27118 2.73043 3.16274 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.15719 3.27118 2.73043 3.16274 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.97980 2.52563 3.03204 0.19727 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.86982 3.47591 0.13017 3.36931 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 2.97980 2.52563 3.03204 0.19727 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.86982 3.47591 0.13017 3.36931 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.97980 2.52563 3.03204 0.19727 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetyone_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:30:16 2013 NSEQ 5 EFFN 3.256836 CKSUM 771752251 STATS LOCAL MSV -8.0885 0.71933 STATS LOCAL VITERBI -7.8092 0.71933 STATS LOCAL FORWARD -3.7578 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92869 1.45006 1.14308 1.19974 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 0.00000 * 1 2.93260 3.56608 0.11956 3.46852 1 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 2 3.40853 0.13318 3.45902 2.81107 2 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 3 0.14474 3.35895 2.78806 3.25860 3 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 4 3.40853 0.13318 3.45902 2.81107 4 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 5 3.06715 2.58148 3.11612 0.18218 5 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 6 3.40853 0.13318 3.45902 2.81107 6 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 7 3.06715 2.58148 3.11612 0.18218 7 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 8 3.40853 0.13318 3.45902 2.81107 8 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 9 3.06715 2.58148 3.11612 0.18218 9 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 10 2.93260 3.56608 0.11956 3.46852 10 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 11 2.93260 3.56608 0.11956 3.46852 11 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 12 3.06715 2.58148 3.11612 0.18218 12 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 13 0.14474 3.35895 2.78806 3.25860 13 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 14 3.06715 2.58148 3.11612 0.18218 14 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 15 3.06715 2.58148 3.11612 0.18218 15 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 16 3.40853 0.13318 3.45902 2.81107 16 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 17 3.40853 0.13318 3.45902 2.81107 17 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 18 2.93260 3.56608 0.11956 3.46852 18 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 19 2.93260 3.56608 0.11956 3.46852 19 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 20 2.93260 3.56608 0.11956 3.46852 20 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 21 2.93260 3.56608 0.11956 3.46852 21 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 22 0.14474 3.35895 2.78806 3.25860 22 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 23 2.93260 3.56608 0.11956 3.46852 23 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 24 3.06715 2.58148 3.11612 0.18218 24 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 25 0.14474 3.35895 2.78806 3.25860 25 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 26 3.06715 2.58148 3.11612 0.18218 26 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 27 2.93260 3.56608 0.11956 3.46852 27 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 28 3.40853 0.13318 3.45902 2.81107 28 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 29 3.40853 0.13318 3.45902 2.81107 29 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 30 3.06715 2.58148 3.11612 0.18218 30 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 31 2.93260 3.56608 0.11956 3.46852 31 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 32 3.06715 2.58148 3.11612 0.18218 32 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 33 3.06715 2.58148 3.11612 0.18218 33 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 34 3.06715 2.58148 3.11612 0.18218 34 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 35 2.93260 3.56608 0.11956 3.46852 35 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 36 0.14474 3.35895 2.78806 3.25860 36 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 37 2.93260 3.56608 0.11956 3.46852 37 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 38 2.93260 3.56608 0.11956 3.46852 38 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 39 2.93260 3.56608 0.11956 3.46852 39 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 40 3.06715 2.58148 3.11612 0.18218 40 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 41 3.40853 0.13318 3.45902 2.81107 41 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 42 2.93260 3.56608 0.11956 3.46852 42 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 43 3.40853 0.13318 3.45902 2.81107 43 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 44 3.06715 2.58148 3.11612 0.18218 44 - - 1.38629 1.38629 1.38629 1.38629 0.03734 3.99945 3.99945 1.46634 0.26236 1.09861 0.40547 45 3.06715 2.58148 3.11612 0.18218 45 - - 1.38629 1.38629 1.38629 1.38629 0.01884 3.98096 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetyseven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:31:35 2013 NSEQ 2 EFFN 2.000000 CKSUM 1000076738 STATS LOCAL MSV -7.4377 0.72839 STATS LOCAL VITERBI -8.3892 0.72839 STATS LOCAL FORWARD -3.4432 0.72839 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.73298 1.57234 1.21276 1.14474 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.57915 2.25909 2.64442 0.28946 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.57915 2.25909 2.64442 0.28946 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.81865 0.23582 2.88868 2.35662 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetysix_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:31:15 2013 NSEQ 6 EFFN 3.377930 CKSUM 2625151402 STATS LOCAL MSV -7.2311 0.71932 STATS LOCAL VITERBI -7.6415 0.71932 STATS LOCAL FORWARD -4.0535 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.62775 1.71421 1.19038 1.14126 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 0.00000 * 1 2.95971 3.60551 0.11524 3.51203 1 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 2 3.45329 0.12783 3.50189 2.84367 2 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 3 0.13960 3.39779 2.81330 3.30112 3 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 4 3.45329 0.12783 3.50189 2.84367 4 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 5 3.10634 2.60641 3.15381 0.17585 5 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 6 3.45329 0.12783 3.50189 2.84367 6 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 7 3.10634 2.60641 3.15381 0.17585 7 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 8 3.10634 2.60641 3.15381 0.17585 8 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 9 3.10634 2.60641 3.15381 0.17585 9 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 10 2.95971 3.60551 0.11524 3.51203 10 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 11 2.95971 3.60551 0.11524 3.51203 11 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 12 3.10634 2.60641 3.15381 0.17585 12 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 13 0.13960 3.39779 2.81330 3.30112 13 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 14 3.10634 2.60641 3.15381 0.17585 14 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 15 3.10634 2.60641 3.15381 0.17585 15 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 16 3.45329 0.12783 3.50189 2.84367 16 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 17 3.45329 0.12783 3.50189 2.84367 17 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 18 2.95971 3.60551 0.11524 3.51203 18 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 19 0.13960 3.39779 2.81330 3.30112 19 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 20 0.13960 3.39779 2.81330 3.30112 20 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 21 2.95971 3.60551 0.11524 3.51203 21 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 22 0.13960 3.39779 2.81330 3.30112 22 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 23 2.95971 3.60551 0.11524 3.51203 23 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 24 3.10634 2.60641 3.15381 0.17585 24 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 25 0.13960 3.39779 2.81330 3.30112 25 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 26 3.10634 2.60641 3.15381 0.17585 26 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 27 2.95971 3.60551 0.11524 3.51203 27 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 28 3.45329 0.12783 3.50189 2.84367 28 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 29 3.10634 2.60641 3.15381 0.17585 29 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 30 3.10634 2.60641 3.15381 0.17585 30 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 31 2.95971 3.60551 0.11524 3.51203 31 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 32 2.84854 0.31627 2.91428 1.83906 32 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 33 3.10634 2.60641 3.15381 0.17585 33 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 34 3.10634 2.60641 3.15381 0.17585 34 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 35 2.95971 3.60551 0.11524 3.51203 35 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 36 0.13960 3.39779 2.81330 3.30112 36 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 37 2.95971 3.60551 0.11524 3.51203 37 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 38 2.95971 3.60551 0.11524 3.51203 38 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 39 2.95971 3.60551 0.11524 3.51203 39 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 40 3.10634 2.60641 3.15381 0.17585 40 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 41 3.10634 2.60641 3.15381 0.17585 41 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 42 2.95971 3.60551 0.11524 3.51203 42 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 43 2.95971 3.60551 0.11524 3.51203 43 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 44 0.13960 3.39779 2.81330 3.30112 44 - - 1.38629 1.38629 1.38629 1.38629 0.03651 4.02140 4.02140 1.46634 0.26236 1.09861 0.40547 45 3.10634 2.60641 3.15381 0.17585 45 - - 1.38629 1.38629 1.38629 1.38629 0.01842 4.00331 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetythree_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:30:38 2013 NSEQ 2 EFFN 2.000000 CKSUM 2477419687 STATS LOCAL MSV -7.4816 0.72797 STATS LOCAL VITERBI -8.2703 0.72797 STATS LOCAL FORWARD -3.1822 0.72797 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.65669 1.51744 1.16370 1.28148 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.23862 2.84929 2.43386 2.70756 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_ninetytwo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:30:25 2013 NSEQ 2 EFFN 2.000000 CKSUM 806446548 STATS LOCAL MSV -7.3080 0.72792 STATS LOCAL VITERBI -8.2802 0.72792 STATS LOCAL FORWARD -3.2888 0.72792 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66046 1.39496 1.21475 1.32682 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.57915 2.25909 2.64442 0.28946 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_Fungi_Ge_58S_end_onehundred_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:32:15 2013 NSEQ 8 EFFN 3.300781 CKSUM 2315744860 STATS LOCAL MSV -8.0030 0.71931 STATS LOCAL VITERBI -7.8239 0.71931 STATS LOCAL FORWARD -4.0467 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.54874 1.37867 1.31735 1.31779 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 0.00000 * 1 3.42500 0.13118 3.47480 2.82309 1 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 2 0.14283 3.37323 2.79735 3.27422 2 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 3 0.14283 3.37323 2.79735 3.27422 3 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 4 0.14283 3.37323 2.79735 3.27422 4 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 5 3.08151 2.59063 3.12994 0.17982 5 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 6 3.08151 2.59063 3.12994 0.17982 6 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 7 2.94261 3.58061 0.11794 3.48454 7 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 8 3.42500 0.13118 3.47480 2.82309 8 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 9 2.94261 3.58061 0.11794 3.48454 9 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 10 3.42500 0.13118 3.47480 2.82309 10 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 11 3.42500 0.13118 3.47480 2.82309 11 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 12 3.08151 2.59063 3.12994 0.17982 12 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 13 3.08151 2.59063 3.12994 0.17982 13 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 14 3.42500 0.13118 3.47480 2.82309 14 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 15 3.08151 2.59063 3.12994 0.17982 15 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 16 3.08151 2.59063 3.12994 0.17982 16 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 17 2.78821 1.95158 2.84729 0.30325 17 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 18 3.42500 0.13118 3.47480 2.82309 18 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 19 2.94261 3.58061 0.11794 3.48454 19 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 20 2.94261 3.58061 0.11794 3.48454 20 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 21 0.14283 3.37323 2.79735 3.27422 21 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 22 0.14283 3.37323 2.79735 3.27422 22 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 23 2.94261 3.58061 0.11794 3.48454 23 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 24 2.94261 3.58061 0.11794 3.48454 24 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 25 3.42500 0.13118 3.47480 2.82309 25 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 26 0.14283 3.37323 2.79735 3.27422 26 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 27 3.08151 2.59063 3.12994 0.17982 27 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 28 2.94261 3.58061 0.11794 3.48454 28 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 29 3.08151 2.59063 3.12994 0.17982 29 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 30 3.42500 0.13118 3.47480 2.82309 30 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 31 3.08151 2.59063 3.12994 0.17982 31 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 32 2.94261 3.58061 0.11794 3.48454 32 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 33 3.08151 2.59063 3.12994 0.17982 33 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 34 3.08151 2.59063 3.12994 0.17982 34 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 35 3.08151 2.59063 3.12994 0.17982 35 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 36 2.94261 3.58061 0.11794 3.48454 36 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 37 0.14283 3.37323 2.79735 3.27422 37 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 38 2.94261 3.58061 0.11794 3.48454 38 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 39 2.94261 3.58061 0.11794 3.48454 39 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 40 2.94261 3.58061 0.11794 3.48454 40 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 41 3.42500 0.13118 3.47480 2.82309 41 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 42 0.14283 3.37323 2.79735 3.27422 42 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 43 3.42500 0.13118 3.47480 2.82309 43 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 44 3.42500 0.13118 3.47480 2.82309 44 - - 1.38629 1.38629 1.38629 1.38629 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547 45 0.14283 3.37323 2.79735 3.27422 45 - - 1.38629 1.38629 1.38629 1.38629 0.01869 3.98913 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevena_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:10:12 2013 NSEQ 2 EFFN 2.000000 CKSUM 31462692 STATS LOCAL MSV -7.5580 0.72731 STATS LOCAL VITERBI -8.1206 0.72731 STATS LOCAL FORWARD -3.3782 0.72731 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.18772 1.54774 1.20275 1.70380 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:10:33 2013 NSEQ 3 EFFN 3.000000 CKSUM 1014321630 STATS LOCAL MSV -7.8858 0.71998 STATS LOCAL VITERBI -7.9612 0.71998 STATS LOCAL FORWARD -3.6592 0.71998 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33401 1.44420 1.03500 1.92814 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 3.30705 0.14631 3.36166 2.73626 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.86982 3.47591 0.13017 3.36931 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.43223 0.62271 2.50508 1.22417 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.86982 3.47591 0.13017 3.36931 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.86982 3.47591 0.13017 3.36931 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.15719 3.27118 2.73043 3.16274 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 0.15719 3.27118 2.73043 3.16274 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 3.30705 0.14631 3.36166 2.73626 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.86982 3.47591 0.13017 3.36931 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.86982 3.47591 0.13017 3.36931 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 0.15719 3.27118 2.73043 3.16274 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.86982 3.47591 0.13017 3.36931 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.15719 3.27118 2.73043 3.16274 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.86982 3.47591 0.13017 3.36931 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:10:42 2013 NSEQ 2 EFFN 2.000000 CKSUM 1686600363 STATS LOCAL MSV -7.6183 0.72714 STATS LOCAL VITERBI -8.3639 0.72714 STATS LOCAL FORWARD -3.2499 0.72714 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28641 1.54950 1.11002 1.70467 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevend_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:10:49 2013 NSEQ 2 EFFN 2.000000 CKSUM 60168800 STATS LOCAL MSV -7.5143 0.72715 STATS LOCAL VITERBI -8.3581 0.72715 STATS LOCAL FORWARD -3.1049 0.72715 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45607 1.47943 1.06949 1.63016 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevene_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:10:56 2013 NSEQ 2 EFFN 2.000000 CKSUM 3015714073 STATS LOCAL MSV -7.7287 0.72707 STATS LOCAL VITERBI -8.3168 0.72707 STATS LOCAL FORWARD -3.2920 0.72707 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28476 1.62231 1.06481 1.70899 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenf_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:03 2013 NSEQ 2 EFFN 2.000000 CKSUM 1098926546 STATS LOCAL MSV -7.5571 0.72714 STATS LOCAL VITERBI -8.2690 0.72714 STATS LOCAL FORWARD -3.2569 0.72714 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28644 1.54944 1.10999 1.70475 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_eleveng_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:09 2013 NSEQ 2 EFFN 2.000000 CKSUM 1408607106 STATS LOCAL MSV -7.6707 0.72693 STATS LOCAL VITERBI -8.2626 0.72693 STATS LOCAL FORWARD -3.1913 0.72693 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23718 1.49217 1.11013 1.86177 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.23862 2.84929 2.43386 2.70756 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:16 2013 NSEQ 2 EFFN 2.000000 CKSUM 1657622204 STATS LOCAL MSV -7.5324 0.72760 STATS LOCAL VITERBI -8.3427 0.72760 STATS LOCAL FORWARD -3.1835 0.72760 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23657 1.53832 1.25535 1.56110 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_eleveni_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:22 2013 NSEQ 2 EFFN 2.000000 CKSUM 3142056612 STATS LOCAL MSV -7.3816 0.72740 STATS LOCAL VITERBI -8.3409 0.72740 STATS LOCAL FORWARD -3.0307 0.72740 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28805 1.47603 1.20591 1.62847 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:30 2013 NSEQ 2 EFFN 2.000000 CKSUM 3827499254 STATS LOCAL MSV -7.6762 0.72829 STATS LOCAL VITERBI -8.2066 0.72829 STATS LOCAL FORWARD -3.2423 0.72829 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28052 1.51428 1.23656 1.55232 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 1.88179 1.10717 1.04597 1.79675 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.81865 0.23582 2.88868 2.35662 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenk_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:40 2013 NSEQ 2 EFFN 2.000000 CKSUM 1084307423 STATS LOCAL MSV -7.6519 0.72712 STATS LOCAL VITERBI -8.2711 0.72712 STATS LOCAL FORWARD -3.2438 0.72712 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39827 1.42033 1.11293 1.69967 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.81865 0.23582 2.88868 2.35662 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenl_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:48 2013 NSEQ 2 EFFN 2.000000 CKSUM 3789997240 STATS LOCAL MSV -7.4936 0.72712 STATS LOCAL VITERBI -8.3381 0.72712 STATS LOCAL FORWARD -3.4595 0.72712 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.39690 1.41715 1.11632 1.69962 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenm_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:11:55 2013 NSEQ 2 EFFN 2.000000 CKSUM 1058382530 STATS LOCAL MSV -7.4899 0.72691 STATS LOCAL VITERBI -8.4598 0.72691 STATS LOCAL FORWARD -3.2071 0.72691 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34292 1.36561 1.11630 1.85660 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.53331 3.02441 0.20344 2.88069 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenn_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:01 2013 NSEQ 2 EFFN 2.000000 CKSUM 1792878469 STATS LOCAL MSV -7.5720 0.72700 STATS LOCAL VITERBI -8.3413 0.72700 STATS LOCAL FORWARD -3.2544 0.72700 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23848 1.42622 1.15763 1.85962 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.23862 2.84929 2.43386 2.70756 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.81865 0.23582 2.88868 2.35662 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.23862 2.84929 2.43386 2.70756 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_eleveno_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:10 2013 NSEQ 2 EFFN 2.000000 CKSUM 2962605744 STATS LOCAL MSV -7.5749 0.72738 STATS LOCAL VITERBI -8.2429 0.72738 STATS LOCAL FORWARD -3.3452 0.72738 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.45286 1.61049 1.06628 1.50498 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenp_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:28 2013 NSEQ 2 EFFN 2.000000 CKSUM 1128946882 STATS LOCAL MSV -7.5047 0.72766 STATS LOCAL VITERBI -8.1942 0.72766 STATS LOCAL FORWARD -3.3423 0.72766 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34425 1.34950 1.31725 1.55106 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.81865 0.23582 2.88868 2.35662 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:36 2013 NSEQ 2 EFFN 2.000000 CKSUM 2840426178 STATS LOCAL MSV -7.6350 0.72784 STATS LOCAL VITERBI -8.3814 0.72784 STATS LOCAL FORWARD -3.1763 0.72784 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40213 1.29039 1.37714 1.48517 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenr_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:43 2013 NSEQ 2 EFFN 2.000000 CKSUM 2656723597 STATS LOCAL MSV -7.3075 0.72802 STATS LOCAL VITERBI -8.3625 0.72802 STATS LOCAL FORWARD -3.5651 0.72802 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.51986 1.45623 1.26505 1.32456 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.57915 2.25909 2.64442 0.28946 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevens_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:49 2013 NSEQ 2 EFFN 2.000000 CKSUM 1392137913 STATS LOCAL MSV -7.4204 0.72747 STATS LOCAL VITERBI -8.3081 0.72747 STATS LOCAL FORWARD -3.4237 0.72747 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28872 1.41280 1.26134 1.62129 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 0.23862 2.84929 2.43386 2.70756 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevent_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:12:56 2013 NSEQ 2 EFFN 2.000000 CKSUM 3547404043 STATS LOCAL MSV -7.5674 0.72762 STATS LOCAL VITERBI -8.3873 0.72762 STATS LOCAL FORWARD -3.4310 0.72762 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33953 1.53476 1.20703 1.49862 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.23862 2.84929 2.43386 2.70756 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.53331 3.02441 0.20344 2.88069 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenu_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:13:03 2013 NSEQ 2 EFFN 2.000000 CKSUM 1867566485 STATS LOCAL MSV -7.5904 0.72727 STATS LOCAL VITERBI -8.2946 0.72727 STATS LOCAL FORWARD -3.2153 0.72727 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.40149 1.30142 1.21373 1.68990 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.57915 2.25909 2.64442 0.28946 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.81865 0.23582 2.88868 2.35662 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.23862 2.84929 2.43386 2.70756 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.23862 2.84929 2.43386 2.70756 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.81865 0.23582 2.88868 2.35662 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.57915 2.25909 2.64442 0.28946 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_Fungi_Ge_SSU_end_elevenv_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 15 11:13:09 2013 NSEQ 2 EFFN 2.000000 CKSUM 3809888057 STATS LOCAL MSV -7.4380 0.72782 STATS LOCAL VITERBI -8.2948 0.72782 STATS LOCAL FORWARD -3.4535 0.72782 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.58945 1.39756 1.21349 1.37990 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.57915 2.25909 2.64442 0.28946 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.57915 2.25909 2.64442 0.28946 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.57915 2.25909 2.64442 0.28946 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.53331 3.02441 0.20344 2.88069 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.23862 2.84929 2.43386 2.70756 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.57915 2.25909 2.64442 0.28946 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.57915 2.25909 2.64442 0.28946 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.57915 2.25909 2.64442 0.28946 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.57915 2.25909 2.64442 0.28946 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.81865 0.23582 2.88868 2.35662 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.53331 3.02441 0.20344 2.88069 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.53331 3.02441 0.20344 2.88069 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23862 2.84929 2.43386 2.70756 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53331 3.02441 0.20344 2.88069 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.53331 3.02441 0.20344 2.88069 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //