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view ITSx_db/HMMs/L.hmm @ 0:f82c70f54bd7 draft
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| author | okorol |
|---|---|
| date | Tue, 24 Mar 2015 12:02:48 -0400 |
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HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_foura_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:48:18 2012 NSEQ 4 EFFN 3.089844 CKSUM 3677159024 STATS LOCAL MSV -8.1113 0.71933 STATS LOCAL VITERBI -7.8119 0.71933 STATS LOCAL FORWARD -3.9220 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72586 1.10743 1.14821 1.74657 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 0.00000 * 1 3.34359 0.14142 3.39674 2.76335 1 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 2 2.89265 3.50850 0.12621 3.40512 2 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 3 3.34359 0.14142 3.39674 2.76335 3 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 4 3.34359 0.14142 3.39674 2.76335 4 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 5 3.34359 0.14142 3.39674 2.76335 5 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 6 2.89265 3.50850 0.12621 3.40512 6 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 7 0.15258 3.30274 2.75126 3.19718 7 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 8 2.89265 3.50850 0.12621 3.40512 8 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 9 2.89265 3.50850 0.12621 3.40512 9 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 10 3.01102 2.54565 3.06211 0.19171 10 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 11 3.34359 0.14142 3.39674 2.76335 11 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 12 3.01102 2.54565 3.06211 0.19171 12 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 13 3.34359 0.14142 3.39674 2.76335 13 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 14 2.89265 3.50850 0.12621 3.40512 14 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 15 3.01102 2.54565 3.06211 0.19171 15 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 16 0.15258 3.30274 2.75126 3.19718 16 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 17 3.34359 0.14142 3.39674 2.76335 17 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 18 3.34359 0.14142 3.39674 2.76335 18 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 19 2.89265 3.50850 0.12621 3.40512 19 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 20 0.15258 3.30274 2.75126 3.19718 20 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 21 2.89265 3.50850 0.12621 3.40512 21 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 22 2.89265 3.50850 0.12621 3.40512 22 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 23 2.89265 3.50850 0.12621 3.40512 23 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 24 3.34359 0.14142 3.39674 2.76335 24 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 25 0.15258 3.30274 2.75126 3.19718 25 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 26 3.34359 0.14142 3.39674 2.76335 26 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 27 2.89265 3.50850 0.12621 3.40512 27 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 28 3.01102 2.54565 3.06211 0.19171 28 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 29 3.34359 0.14142 3.39674 2.76335 29 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 30 3.01102 2.54565 3.06211 0.19171 30 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 31 2.89265 3.50850 0.12621 3.40512 31 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 32 3.34359 0.14142 3.39674 2.76335 32 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 33 3.34359 0.14142 3.39674 2.76335 33 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 34 3.01102 2.54565 3.06211 0.19171 34 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 35 2.89265 3.50850 0.12621 3.40512 35 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 36 0.15258 3.30274 2.75126 3.19718 36 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 37 2.89265 3.50850 0.12621 3.40512 37 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 38 3.34359 0.14142 3.39674 2.76335 38 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 39 2.89265 3.50850 0.12621 3.40512 39 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 40 3.01102 2.54565 3.06211 0.19171 40 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 41 3.34359 0.14142 3.39674 2.76335 41 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 42 0.15258 3.30274 2.75126 3.19718 42 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 43 3.34359 0.14142 3.39674 2.76335 43 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 44 0.15258 3.30274 2.75126 3.19718 44 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 45 2.89265 3.50850 0.12621 3.40512 45 - - 1.38629 1.38629 1.38629 1.38629 0.01946 3.94929 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_fourb_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:48:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 131491290 STATS LOCAL MSV -7.4968 0.72757 STATS LOCAL VITERBI -8.3707 0.72757 STATS LOCAL FORWARD -3.7471 0.72757 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.66684 1.23957 1.21839 1.48748 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.57915 2.25909 2.64442 0.28946 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.53331 3.02441 0.20344 2.88069 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.23862 2.84929 2.43386 2.70756 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.57915 2.25909 2.64442 0.28946 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.81865 0.23582 2.88868 2.35662 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.81865 0.23582 2.88868 2.35662 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.57915 2.25909 2.64442 0.28946 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_fourc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:48:31 2012 NSEQ 3 EFFN 3.000000 CKSUM 1848225497 STATS LOCAL MSV -8.1659 0.71999 STATS LOCAL VITERBI -7.8126 0.71999 STATS LOCAL FORWARD -4.1112 0.71999 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72006 1.20903 1.20251 1.50499 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.86982 3.47591 0.13017 3.36931 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.97980 2.52563 3.03204 0.19727 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.86982 3.47591 0.13017 3.36931 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 0.15719 3.27118 2.73043 3.16274 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 2.86982 3.47591 0.13017 3.36931 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.97980 2.52563 3.03204 0.19727 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 3.30705 0.14631 3.36166 2.73626 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 3.30705 0.14631 3.36166 2.73626 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:33:59 2012 NSEQ 2 EFFN 2.000000 CKSUM 2649339398 STATS LOCAL MSV -7.6624 0.72818 STATS LOCAL VITERBI -8.3675 0.72818 STATS LOCAL FORWARD -3.1512 0.72818 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82330 1.26894 1.16757 1.40139 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.53331 3.02441 0.20344 2.88069 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.81865 0.23582 2.88868 2.35662 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.53331 3.02441 0.20344 2.88069 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.23862 2.84929 2.43386 2.70756 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.57915 2.25909 2.64442 0.28946 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.57915 2.25909 2.64442 0.28946 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.15554 1.00938 2.23102 0.88601 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.23862 2.84929 2.43386 2.70756 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.81865 0.23582 2.88868 2.35662 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:46:07 2012 NSEQ 9 EFFN 3.062988 CKSUM 1860575478 STATS LOCAL MSV -8.2074 0.71931 STATS LOCAL VITERBI -7.8383 0.71931 STATS LOCAL FORWARD -3.6122 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82320 1.06212 1.09674 1.84004 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 0.00000 * 1 2.88593 3.49888 0.12737 3.39454 1 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 2 3.33278 0.14284 3.38637 2.75536 2 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 3 2.88593 3.49888 0.12737 3.39454 3 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 4 3.33278 0.14284 3.38637 2.75536 4 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 5 3.33278 0.14284 3.38637 2.75536 5 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 6 3.33278 0.14284 3.38637 2.75536 6 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 7 2.88593 3.49888 0.12737 3.39454 7 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 8 0.15393 3.29341 2.74511 3.18699 8 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 9 2.88593 3.49888 0.12737 3.39454 9 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 10 2.88593 3.49888 0.12737 3.39454 10 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 11 3.00176 2.53972 3.05320 0.19334 11 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 12 3.00176 2.53972 3.05320 0.19334 12 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 13 3.33278 0.14284 3.38637 2.75536 13 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 14 0.15393 3.29341 2.74511 3.18699 14 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 15 3.33278 0.14284 3.38637 2.75536 15 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 16 2.88593 3.49888 0.12737 3.39454 16 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 17 3.33278 0.14284 3.38637 2.75536 17 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 18 3.33278 0.14284 3.38637 2.75536 18 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 19 2.88593 3.49888 0.12737 3.39454 19 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 20 0.15393 3.29341 2.74511 3.18699 20 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 21 2.88593 3.49888 0.12737 3.39454 21 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 22 2.88593 3.49888 0.12737 3.39454 22 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 23 2.88593 3.49888 0.12737 3.39454 23 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 24 3.33278 0.14284 3.38637 2.75536 24 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 25 0.15393 3.29341 2.74511 3.18699 25 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 26 3.33278 0.14284 3.38637 2.75536 26 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 27 2.88593 3.49888 0.12737 3.39454 27 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 28 3.00176 2.53972 3.05320 0.19334 28 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 29 3.33278 0.14284 3.38637 2.75536 29 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 30 3.00176 2.53972 3.05320 0.19334 30 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 31 2.88593 3.49888 0.12737 3.39454 31 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 32 3.33278 0.14284 3.38637 2.75536 32 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 33 3.33278 0.14284 3.38637 2.75536 33 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 34 3.00176 2.53972 3.05320 0.19334 34 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 35 2.88593 3.49888 0.12737 3.39454 35 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 36 0.15393 3.29341 2.74511 3.18699 36 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 37 2.88593 3.49888 0.12737 3.39454 37 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 38 3.33278 0.14284 3.38637 2.75536 38 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 39 2.88593 3.49888 0.12737 3.39454 39 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 40 3.00176 2.53972 3.05320 0.19334 40 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 41 3.33278 0.14284 3.38637 2.75536 41 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 42 0.15393 3.29341 2.74511 3.18699 42 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 43 3.33278 0.14284 3.38637 2.75536 43 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 44 3.33278 0.14284 3.38637 2.75536 44 - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96328 3.96328 1.46634 0.26236 1.09861 0.40547 45 2.88593 3.49888 0.12737 3.39454 45 - - 1.38629 1.38629 1.38629 1.38629 0.01956 3.94410 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoa_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:34:25 2012 NSEQ 63 EFFN 3.541443 CKSUM 483320876 STATS LOCAL MSV -7.4302 0.71932 STATS LOCAL VITERBI -7.8320 0.71932 STATS LOCAL FORWARD -3.9705 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.03893 1.09040 1.11844 1.57522 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 0.00000 * 1 3.15732 2.63877 3.20283 0.16799 1 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 2 2.99408 3.65584 0.10998 3.56768 2 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 3 3.31573 0.16407 3.36836 2.51866 3 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 4 2.99408 3.65584 0.10998 3.56768 4 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 5 3.51077 0.12132 3.55687 2.88519 5 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 6 3.51077 0.12132 3.55687 2.88519 6 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 7 3.51077 0.12132 3.55687 2.88519 7 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 8 2.64517 3.49052 0.14516 3.39211 8 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 9 0.13329 3.44781 2.84562 3.35595 9 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 10 2.99408 3.65584 0.10998 3.56768 10 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 11 2.99408 3.65584 0.10998 3.56768 11 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 12 3.51077 0.12132 3.55687 2.88519 12 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 13 3.15732 2.63877 3.20283 0.16799 13 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 14 3.36077 0.15337 3.41187 2.59697 14 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 15 2.99408 3.65584 0.10998 3.56768 15 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 16 3.15732 2.63877 3.20283 0.16799 16 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 17 3.51077 0.12132 3.55687 2.88519 17 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 18 2.59074 1.44894 2.65716 0.47793 18 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 19 2.57352 3.23287 0.18842 2.88198 19 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 20 0.13329 3.44781 2.84562 3.35595 20 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 21 2.99408 3.65584 0.10998 3.56768 21 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 22 2.99408 3.65584 0.10998 3.56768 22 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 23 2.99408 3.65584 0.10998 3.56768 23 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 24 3.51077 0.12132 3.55687 2.88519 24 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 25 0.13329 3.44781 2.84562 3.35595 25 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 26 3.15732 2.63877 3.20283 0.16799 26 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 27 2.90064 3.22314 0.13898 3.35416 27 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 28 3.34425 0.15723 3.39591 2.56791 28 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 29 3.51077 0.12132 3.55687 2.88519 29 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 30 3.15732 2.63877 3.20283 0.16799 30 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 31 2.99408 3.65584 0.10998 3.56768 31 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 32 3.51077 0.12132 3.55687 2.88519 32 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 33 3.51077 0.12132 3.55687 2.88519 33 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 34 3.15732 2.63877 3.20283 0.16799 34 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 35 2.99408 3.65584 0.10998 3.56768 35 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 36 0.13329 3.44781 2.84562 3.35595 36 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 37 2.99408 3.65584 0.10998 3.56768 37 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 38 3.51077 0.12132 3.55687 2.88519 38 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 39 2.99408 3.65584 0.10998 3.56768 39 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 40 3.15732 2.63877 3.20283 0.16799 40 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 41 3.51077 0.12132 3.55687 2.88519 41 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 42 3.09972 0.15335 3.35512 2.77733 42 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 43 1.60728 2.31659 0.62412 1.80045 43 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 44 3.10946 0.22201 3.16858 2.18564 44 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05030 4.05030 1.46634 0.26236 1.09861 0.40547 45 3.08572 2.45946 3.13390 0.19204 45 - - 1.38629 1.38629 1.38629 1.38629 0.01788 4.03272 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twob_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:34:51 2012 NSEQ 69 EFFN 3.407043 CKSUM 3150839531 STATS LOCAL MSV -7.5085 0.71932 STATS LOCAL VITERBI -7.8461 0.71932 STATS LOCAL FORWARD -3.6364 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.04551 1.00425 1.10045 1.76232 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 0.00000 * 1 2.96602 3.61471 0.11425 3.52219 1 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 2 3.46377 0.12661 3.51192 2.85127 2 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 3 2.96602 3.61471 0.11425 3.52219 3 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 4 3.46377 0.12661 3.51192 2.85127 4 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 5 3.46377 0.12661 3.51192 2.85127 5 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 6 3.46377 0.12661 3.51192 2.85127 6 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 7 2.96602 3.61471 0.11425 3.52219 7 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 8 0.13843 3.40690 2.81919 3.31109 8 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 9 2.96602 3.61471 0.11425 3.52219 9 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 10 2.96602 3.61471 0.11425 3.52219 10 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 11 3.46377 0.12661 3.51192 2.85127 11 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 12 3.11557 2.61228 3.16269 0.17439 12 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 13 3.46377 0.12661 3.51192 2.85127 13 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 14 2.18816 3.18460 0.22329 3.06608 14 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 15 3.11557 2.61228 3.16269 0.17439 15 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 16 2.71675 0.39482 2.78521 1.61749 16 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 17 3.46377 0.12661 3.51192 2.85127 17 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 18 3.46377 0.12661 3.51192 2.85127 18 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 19 2.59926 3.43451 0.15351 3.33160 19 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 20 0.13843 3.40690 2.81919 3.31109 20 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 21 2.96602 3.61471 0.11425 3.52219 21 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 22 2.96602 3.61471 0.11425 3.52219 22 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 23 2.96602 3.61471 0.11425 3.52219 23 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 24 3.46377 0.12661 3.51192 2.85127 24 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 25 0.13843 3.40690 2.81919 3.31109 25 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 26 3.11557 2.61228 3.16269 0.17439 26 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 27 2.96602 3.61471 0.11425 3.52219 27 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 28 3.46377 0.12661 3.51192 2.85127 28 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 29 3.46377 0.12661 3.51192 2.85127 29 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 30 2.59381 1.51853 2.65973 0.45214 30 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 31 2.96602 3.61471 0.11425 3.52219 31 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 32 3.20944 0.18626 3.26557 2.39265 32 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 33 3.46377 0.12661 3.51192 2.85127 33 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 34 3.11557 2.61228 3.16269 0.17439 34 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 35 2.96602 3.61471 0.11425 3.52219 35 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 36 0.13843 3.40690 2.81919 3.31109 36 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 37 2.96602 3.61471 0.11425 3.52219 37 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 38 3.46377 0.12661 3.51192 2.85127 38 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 39 2.96602 3.61471 0.11425 3.52219 39 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 40 3.11557 2.61228 3.16269 0.17439 40 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 41 3.46377 0.12661 3.51192 2.85127 41 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 42 3.46377 0.12661 3.51192 2.85127 42 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 43 2.43900 3.34200 0.17680 3.23306 43 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 44 3.31928 0.15831 3.37192 2.57812 44 - - 1.38629 1.38629 1.38629 1.38629 0.03632 4.02661 4.02661 1.46634 0.26236 1.09861 0.40547 45 2.80292 1.92973 2.86176 0.30515 45 - - 1.38629 1.38629 1.38629 1.38629 0.01833 4.00861 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoc_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:34:58 2012 NSEQ 11 EFFN 3.558350 CKSUM 944707035 STATS LOCAL MSV -7.4441 0.71932 STATS LOCAL VITERBI -7.7493 0.71932 STATS LOCAL FORWARD -3.8456 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93151 1.08511 1.17869 1.56292 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 0.00000 * 1 2.99749 3.66086 0.10947 3.57324 1 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 2 3.51652 0.12069 3.56237 2.88933 2 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 3 2.99749 3.66086 0.10947 3.57324 3 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 4 3.51652 0.12069 3.56237 2.88933 4 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 5 3.51652 0.12069 3.56237 2.88933 5 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 6 3.51652 0.12069 3.56237 2.88933 6 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 7 2.99749 3.66086 0.10947 3.57324 7 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 8 0.13268 3.45283 2.84886 3.36146 8 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 9 2.99749 3.66086 0.10947 3.57324 9 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 10 2.99749 3.66086 0.10947 3.57324 10 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 11 3.51652 0.12069 3.56237 2.88933 11 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 12 3.16247 2.64204 3.20777 0.16722 12 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 13 3.16247 2.64204 3.20777 0.16722 13 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 14 2.99749 3.66086 0.10947 3.57324 14 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 15 3.16247 2.64204 3.20777 0.16722 15 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 16 2.85970 0.32413 2.92525 1.79634 16 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 17 3.51652 0.12069 3.56237 2.88933 17 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 18 3.51652 0.12069 3.56237 2.88933 18 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 19 0.13268 3.45283 2.84886 3.36146 19 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 20 0.13268 3.45283 2.84886 3.36146 20 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 21 2.99749 3.66086 0.10947 3.57324 21 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 22 2.99749 3.66086 0.10947 3.57324 22 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 23 2.99749 3.66086 0.10947 3.57324 23 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 24 3.51652 0.12069 3.56237 2.88933 24 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 25 0.13268 3.45283 2.84886 3.36146 25 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 26 3.16247 2.64204 3.20777 0.16722 26 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 27 2.99749 3.66086 0.10947 3.57324 27 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 28 2.45623 1.03792 2.52724 0.73361 28 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 29 3.51652 0.12069 3.56237 2.88933 29 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 30 3.16247 2.64204 3.20777 0.16722 30 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 31 2.99749 3.66086 0.10947 3.57324 31 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 32 3.51652 0.12069 3.56237 2.88933 32 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 33 3.51652 0.12069 3.56237 2.88933 33 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 34 3.16247 2.64204 3.20777 0.16722 34 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 35 2.99749 3.66086 0.10947 3.57324 35 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 36 0.13268 3.45283 2.84886 3.36146 36 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 37 2.99749 3.66086 0.10947 3.57324 37 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 38 3.51652 0.12069 3.56237 2.88933 38 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 39 2.99749 3.66086 0.10947 3.57324 39 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 40 3.16247 2.64204 3.20777 0.16722 40 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 41 3.51652 0.12069 3.56237 2.88933 41 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 42 3.51652 0.12069 3.56237 2.88933 42 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 43 2.01505 1.58261 1.26724 0.96853 43 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 44 2.86287 0.32252 2.92835 1.80127 44 - - 1.38629 1.38629 1.38629 1.38629 0.03535 4.05324 4.05324 1.46634 0.26236 1.09861 0.40547 45 3.16247 2.64204 3.20777 0.16722 45 - - 1.38629 1.38629 1.38629 1.38629 0.01783 4.03572 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twod_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:06 2012 NSEQ 14 EFFN 3.072754 CKSUM 2872875780 STATS LOCAL MSV -8.2157 0.71932 STATS LOCAL VITERBI -7.9043 0.71932 STATS LOCAL FORWARD -3.5847 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 2.05213 1.01793 1.04891 1.83335 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 0.00000 * 1 2.88838 3.50239 0.12695 3.39840 1 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 2 3.33672 0.14232 3.39016 2.75827 2 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 3 2.88838 3.50239 0.12695 3.39840 3 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 4 3.33672 0.14232 3.39016 2.75827 4 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 5 3.33672 0.14232 3.39016 2.75827 5 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 6 3.33672 0.14232 3.39016 2.75827 6 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 7 2.88838 3.50239 0.12695 3.39840 7 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 8 0.15343 3.29681 2.74736 3.19071 8 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 9 2.88838 3.50239 0.12695 3.39840 9 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 10 2.88838 3.50239 0.12695 3.39840 10 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 11 3.33672 0.14232 3.39016 2.75827 11 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 12 3.00514 2.54188 3.05644 0.19274 12 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 13 3.33672 0.14232 3.39016 2.75827 13 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 14 2.88838 3.50239 0.12695 3.39840 14 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 15 3.00514 2.54188 3.05644 0.19274 15 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 16 3.33672 0.14232 3.39016 2.75827 16 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 17 3.33672 0.14232 3.39016 2.75827 17 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 18 3.33672 0.14232 3.39016 2.75827 18 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 19 2.88838 3.50239 0.12695 3.39840 19 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 20 0.15343 3.29681 2.74736 3.19071 20 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 21 2.88838 3.50239 0.12695 3.39840 21 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 22 2.88838 3.50239 0.12695 3.39840 22 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 23 2.88838 3.50239 0.12695 3.39840 23 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 24 3.33672 0.14232 3.39016 2.75827 24 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 25 0.15343 3.29681 2.74736 3.19071 25 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 26 3.00514 2.54188 3.05644 0.19274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 27 2.88838 3.50239 0.12695 3.39840 27 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 28 3.33672 0.14232 3.39016 2.75827 28 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 29 3.33672 0.14232 3.39016 2.75827 29 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 30 3.00514 2.54188 3.05644 0.19274 30 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 31 2.88838 3.50239 0.12695 3.39840 31 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 32 3.33672 0.14232 3.39016 2.75827 32 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 33 3.33672 0.14232 3.39016 2.75827 33 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 34 3.00514 2.54188 3.05644 0.19274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 35 2.88838 3.50239 0.12695 3.39840 35 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 36 0.15343 3.29681 2.74736 3.19071 36 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 37 2.88838 3.50239 0.12695 3.39840 37 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 38 3.33672 0.14232 3.39016 2.75827 38 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 39 2.88838 3.50239 0.12695 3.39840 39 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 40 3.00514 2.54188 3.05644 0.19274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 41 3.33672 0.14232 3.39016 2.75827 41 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 42 3.33672 0.14232 3.39016 2.75827 42 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 43 2.88838 3.50239 0.12695 3.39840 43 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 44 2.88838 3.50239 0.12695 3.39840 44 - - 1.38629 1.38629 1.38629 1.38629 0.03867 3.96514 3.96514 1.46634 0.26236 1.09861 0.40547 45 3.04408 0.22016 3.10514 2.25233 45 - - 1.38629 1.38629 1.38629 1.38629 0.01952 3.94599 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoe_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:14 2012 NSEQ 4 EFFN 3.160156 CKSUM 1816074381 STATS LOCAL MSV -8.2845 0.71931 STATS LOCAL VITERBI -7.7890 0.71931 STATS LOCAL FORWARD -4.1716 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.72354 1.26655 1.14343 1.50941 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 0.00000 * 1 2.90985 3.53322 0.12331 3.43230 1 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 2 3.37140 0.13782 3.42342 2.78385 2 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 3 2.90985 3.53322 0.12331 3.43230 3 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 4 3.37140 0.13782 3.42342 2.78385 4 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 5 3.37140 0.13782 3.42342 2.78385 5 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 6 3.37140 0.13782 3.42342 2.78385 6 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 7 2.90985 3.53322 0.12331 3.43230 7 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 8 0.14916 3.32679 2.76705 3.22344 8 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 9 2.90985 3.53322 0.12331 3.43230 9 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 10 2.90985 3.53322 0.12331 3.43230 10 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 11 3.37140 0.13782 3.42342 2.78385 11 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 12 3.03495 2.56095 3.08514 0.18757 12 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 13 3.37140 0.13782 3.42342 2.78385 13 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 14 0.14916 3.32679 2.76705 3.22344 14 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 15 3.03495 2.56095 3.08514 0.18757 15 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 16 0.14916 3.32679 2.76705 3.22344 16 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 17 3.37140 0.13782 3.42342 2.78385 17 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 18 3.37140 0.13782 3.42342 2.78385 18 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 19 2.90985 3.53322 0.12331 3.43230 19 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 20 0.14916 3.32679 2.76705 3.22344 20 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 21 2.90985 3.53322 0.12331 3.43230 21 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 22 2.90985 3.53322 0.12331 3.43230 22 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 23 2.90985 3.53322 0.12331 3.43230 23 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 24 3.37140 0.13782 3.42342 2.78385 24 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 25 0.14916 3.32679 2.76705 3.22344 25 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 26 3.03495 2.56095 3.08514 0.18757 26 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 27 2.90985 3.53322 0.12331 3.43230 27 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 28 3.03495 2.56095 3.08514 0.18757 28 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 29 3.37140 0.13782 3.42342 2.78385 29 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 30 3.03495 2.56095 3.08514 0.18757 30 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 31 2.90985 3.53322 0.12331 3.43230 31 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 32 3.03495 2.56095 3.08514 0.18757 32 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 33 3.37140 0.13782 3.42342 2.78385 33 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 34 3.03495 2.56095 3.08514 0.18757 34 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 35 2.90985 3.53322 0.12331 3.43230 35 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 36 0.14916 3.32679 2.76705 3.22344 36 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 37 2.90985 3.53322 0.12331 3.43230 37 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 38 3.37140 0.13782 3.42342 2.78385 38 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 39 2.90985 3.53322 0.12331 3.43230 39 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 40 3.03495 2.56095 3.08514 0.18757 40 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 41 3.37140 0.13782 3.42342 2.78385 41 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 42 0.14916 3.32679 2.76705 3.22344 42 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 43 3.03495 2.56095 3.08514 0.18757 43 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 44 3.03495 2.56095 3.08514 0.18757 44 - - 1.38629 1.38629 1.38629 1.38629 0.03803 3.98158 3.98158 1.46634 0.26236 1.09861 0.40547 45 2.90985 3.53322 0.12331 3.43230 45 - - 1.38629 1.38629 1.38629 1.38629 0.01919 3.96275 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twof_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:21 2012 NSEQ 12 EFFN 3.524414 CKSUM 4252090704 STATS LOCAL MSV -7.3373 0.71932 STATS LOCAL VITERBI -7.6151 0.71932 STATS LOCAL FORWARD -4.1079 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.90012 1.18904 1.09310 1.55703 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 0.00000 * 1 2.99061 3.65075 0.11049 3.56205 1 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 2 3.50494 0.12196 3.55129 2.88100 2 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 3 2.99061 3.65075 0.11049 3.56205 3 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 4 3.50494 0.12196 3.55129 2.88100 4 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 5 3.50494 0.12196 3.55129 2.88100 5 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 6 3.50494 0.12196 3.55129 2.88100 6 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 7 2.99061 3.65075 0.11049 3.56205 7 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 8 0.13392 3.44273 2.84235 3.35037 8 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 9 2.99061 3.65075 0.11049 3.56205 9 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 10 2.99061 3.65075 0.11049 3.56205 10 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 11 3.50494 0.12196 3.55129 2.88100 11 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 12 3.15211 2.63547 3.19782 0.16877 12 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 13 3.50494 0.12196 3.55129 2.88100 13 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 14 2.02590 3.10448 0.25804 2.98161 14 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 15 3.15211 2.63547 3.19782 0.16877 15 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 16 0.13392 3.44273 2.84235 3.35037 16 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 17 3.50494 0.12196 3.55129 2.88100 17 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 18 3.50494 0.12196 3.55129 2.88100 18 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 19 2.99061 3.65075 0.11049 3.56205 19 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 20 0.13392 3.44273 2.84235 3.35037 20 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 21 2.99061 3.65075 0.11049 3.56205 21 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 22 2.99061 3.65075 0.11049 3.56205 22 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 23 2.99061 3.65075 0.11049 3.56205 23 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 24 3.50494 0.12196 3.55129 2.88100 24 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 25 0.13392 3.44273 2.84235 3.35037 25 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 26 3.15211 2.63547 3.19782 0.16877 26 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 27 2.99061 3.65075 0.11049 3.56205 27 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 28 2.45514 0.77885 2.52723 0.97993 28 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 29 3.50494 0.12196 3.55129 2.88100 29 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 30 3.15211 2.63547 3.19782 0.16877 30 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 31 2.99061 3.65075 0.11049 3.56205 31 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 32 3.15211 2.63547 3.19782 0.16877 32 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 33 3.50494 0.12196 3.55129 2.88100 33 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 34 3.15211 2.63547 3.19782 0.16877 34 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 35 2.99061 3.65075 0.11049 3.56205 35 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 36 0.13392 3.44273 2.84235 3.35037 36 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 37 2.99061 3.65075 0.11049 3.56205 37 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 38 3.50494 0.12196 3.55129 2.88100 38 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 39 2.99061 3.65075 0.11049 3.56205 39 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 40 3.15211 2.63547 3.19782 0.16877 40 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 41 3.50494 0.12196 3.55129 2.88100 41 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 42 1.57096 0.54164 2.38169 2.13737 42 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 43 2.78346 1.83757 2.84334 0.32748 43 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 44 3.15211 2.63547 3.19782 0.16877 44 - - 1.38629 1.38629 1.38629 1.38629 0.03556 4.04733 4.04733 1.46634 0.26236 1.09861 0.40547 45 2.39961 3.34563 0.18064 3.23722 45 - - 1.38629 1.38629 1.38629 1.38629 0.01794 4.02970 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twog_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:30 2012 NSEQ 49 EFFN 3.155212 CKSUM 2291896190 STATS LOCAL MSV -8.0235 0.71933 STATS LOCAL VITERBI -7.6669 0.71933 STATS LOCAL FORWARD -4.0260 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82102 1.16638 1.09237 1.65429 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 0.00000 * 1 2.90866 3.53150 0.12351 3.43041 1 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 2 3.36946 0.13806 3.42157 2.78242 2 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 3 2.90866 3.53150 0.12351 3.43041 3 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 4 3.36946 0.13806 3.42157 2.78242 4 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 5 3.36946 0.13806 3.42157 2.78242 5 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 6 3.36946 0.13806 3.42157 2.78242 6 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 7 2.90866 3.53150 0.12351 3.43041 7 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 8 0.14940 3.32512 2.76595 3.22162 8 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 9 2.90866 3.53150 0.12351 3.43041 9 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 10 2.90866 3.53150 0.12351 3.43041 10 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 11 3.36946 0.13806 3.42157 2.78242 11 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 12 3.03328 2.55988 3.08354 0.18786 12 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 13 3.36946 0.13806 3.42157 2.78242 13 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 14 2.90866 3.53150 0.12351 3.43041 14 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 15 3.03328 2.55988 3.08354 0.18786 15 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 16 0.14940 3.32512 2.76595 3.22162 16 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 17 3.36946 0.13806 3.42157 2.78242 17 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 18 3.36946 0.13806 3.42157 2.78242 18 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 19 2.90866 3.53150 0.12351 3.43041 19 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 20 0.14940 3.32512 2.76595 3.22162 20 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 21 2.90866 3.53150 0.12351 3.43041 21 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 22 2.90866 3.53150 0.12351 3.43041 22 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 23 2.90866 3.53150 0.12351 3.43041 23 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 24 3.36946 0.13806 3.42157 2.78242 24 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 25 0.14940 3.32512 2.76595 3.22162 25 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 26 3.03328 2.55988 3.08354 0.18786 26 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 27 2.90866 3.53150 0.12351 3.43041 27 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 28 2.85073 0.29930 2.91641 1.91913 28 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 29 3.36946 0.13806 3.42157 2.78242 29 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 30 3.03328 2.55988 3.08354 0.18786 30 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 31 2.90866 3.53150 0.12351 3.43041 31 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 32 3.03328 2.55988 3.08354 0.18786 32 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 33 3.36946 0.13806 3.42157 2.78242 33 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 34 3.03328 2.55988 3.08354 0.18786 34 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 35 2.90866 3.53150 0.12351 3.43041 35 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 36 0.14940 3.32512 2.76595 3.22162 36 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 37 2.90866 3.53150 0.12351 3.43041 37 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 38 3.36946 0.13806 3.42157 2.78242 38 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 39 2.90866 3.53150 0.12351 3.43041 39 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 40 3.03328 2.55988 3.08354 0.18786 40 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 41 3.36946 0.13806 3.42157 2.78242 41 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 42 3.36946 0.13806 3.42157 2.78242 42 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 43 0.14940 3.32512 2.76595 3.22162 43 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 44 3.03328 2.55988 3.08354 0.18786 44 - - 1.38629 1.38629 1.38629 1.38629 0.03806 3.98066 3.98066 1.46634 0.26236 1.09861 0.40547 45 2.90866 3.53150 0.12351 3.43041 45 - - 1.38629 1.38629 1.38629 1.38629 0.01921 3.96181 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoh_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:40 2012 NSEQ 8 EFFN 3.089844 CKSUM 909806235 STATS LOCAL MSV -8.0300 0.71932 STATS LOCAL VITERBI -7.6424 0.71932 STATS LOCAL FORWARD -3.9465 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92796 1.15977 1.04591 1.66270 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 0.00000 * 1 2.89265 3.50850 0.12621 3.40512 1 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 2 3.34359 0.14142 3.39674 2.76335 2 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 3 2.89265 3.50850 0.12621 3.40512 3 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 4 3.34359 0.14142 3.39674 2.76335 4 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 5 3.34359 0.14142 3.39674 2.76335 5 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 6 3.34359 0.14142 3.39674 2.76335 6 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 7 2.89265 3.50850 0.12621 3.40512 7 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 8 0.15258 3.30274 2.75126 3.19718 8 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 9 2.89265 3.50850 0.12621 3.40512 9 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 10 2.89265 3.50850 0.12621 3.40512 10 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 11 3.34359 0.14142 3.39674 2.76335 11 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 12 3.01102 2.54565 3.06211 0.19171 12 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 13 3.34359 0.14142 3.39674 2.76335 13 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 14 2.89265 3.50850 0.12621 3.40512 14 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 15 3.01102 2.54565 3.06211 0.19171 15 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 16 0.15258 3.30274 2.75126 3.19718 16 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 17 3.34359 0.14142 3.39674 2.76335 17 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 18 3.34359 0.14142 3.39674 2.76335 18 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 19 2.89265 3.50850 0.12621 3.40512 19 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 20 0.15258 3.30274 2.75126 3.19718 20 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 21 2.89265 3.50850 0.12621 3.40512 21 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 22 2.89265 3.50850 0.12621 3.40512 22 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 23 2.89265 3.50850 0.12621 3.40512 23 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 24 3.34359 0.14142 3.39674 2.76335 24 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 25 0.15258 3.30274 2.75126 3.19718 25 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 26 3.01102 2.54565 3.06211 0.19171 26 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 27 2.89265 3.50850 0.12621 3.40512 27 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 28 3.34359 0.14142 3.39674 2.76335 28 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 29 3.34359 0.14142 3.39674 2.76335 29 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 30 3.01102 2.54565 3.06211 0.19171 30 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 31 2.89265 3.50850 0.12621 3.40512 31 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 32 3.01102 2.54565 3.06211 0.19171 32 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 33 3.34359 0.14142 3.39674 2.76335 33 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 34 3.01102 2.54565 3.06211 0.19171 34 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 35 2.89265 3.50850 0.12621 3.40512 35 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 36 0.15258 3.30274 2.75126 3.19718 36 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 37 2.89265 3.50850 0.12621 3.40512 37 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 38 3.34359 0.14142 3.39674 2.76335 38 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 39 2.89265 3.50850 0.12621 3.40512 39 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 40 3.01102 2.54565 3.06211 0.19171 40 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 41 3.34359 0.14142 3.39674 2.76335 41 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 42 3.34359 0.14142 3.39674 2.76335 42 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 43 2.89265 3.50850 0.12621 3.40512 43 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 44 3.01102 2.54565 3.06211 0.19171 44 - - 1.38629 1.38629 1.38629 1.38629 0.03854 3.96837 3.96837 1.46634 0.26236 1.09861 0.40547 45 2.89265 3.50850 0.12621 3.40512 45 - - 1.38629 1.38629 1.38629 1.38629 0.01946 3.94929 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoi_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:46 2012 NSEQ 6 EFFN 3.219727 CKSUM 1018979143 STATS LOCAL MSV -8.1293 0.71931 STATS LOCAL VITERBI -7.7358 0.71931 STATS LOCAL FORWARD -4.1604 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.86045 1.20726 1.08050 1.58009 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 0.00000 * 1 2.92399 3.55362 0.12096 3.45477 1 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 2 3.39443 0.13492 3.44551 2.80075 2 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 3 2.92399 3.55362 0.12096 3.45477 3 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 4 3.39443 0.13492 3.44551 2.80075 4 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 5 3.39443 0.13492 3.44551 2.80075 5 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 6 3.39443 0.13492 3.44551 2.80075 6 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 7 2.92399 3.55362 0.12096 3.45477 7 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 8 0.14640 3.34673 2.78009 3.24524 8 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 9 2.92399 3.55362 0.12096 3.45477 9 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 10 2.92399 3.55362 0.12096 3.45477 10 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 11 3.39443 0.13492 3.44551 2.80075 11 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 12 3.05488 2.57367 3.10432 0.18421 12 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 13 3.39443 0.13492 3.44551 2.80075 13 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 14 2.92399 3.55362 0.12096 3.45477 14 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 15 3.05488 2.57367 3.10432 0.18421 15 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 16 0.14640 3.34673 2.78009 3.24524 16 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 17 3.39443 0.13492 3.44551 2.80075 17 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 18 3.39443 0.13492 3.44551 2.80075 18 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 19 0.52608 2.60866 1.38344 2.46821 19 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 20 0.14640 3.34673 2.78009 3.24524 20 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 21 2.92399 3.55362 0.12096 3.45477 21 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 22 2.92399 3.55362 0.12096 3.45477 22 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 23 2.92399 3.55362 0.12096 3.45477 23 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 24 3.39443 0.13492 3.44551 2.80075 24 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 25 0.14640 3.34673 2.78009 3.24524 25 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 26 3.05488 2.57367 3.10432 0.18421 26 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 27 2.92399 3.55362 0.12096 3.45477 27 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 28 3.05488 2.57367 3.10432 0.18421 28 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 29 3.39443 0.13492 3.44551 2.80075 29 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 30 3.05488 2.57367 3.10432 0.18421 30 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 31 2.92399 3.55362 0.12096 3.45477 31 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 32 3.05488 2.57367 3.10432 0.18421 32 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 33 3.39443 0.13492 3.44551 2.80075 33 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 34 3.05488 2.57367 3.10432 0.18421 34 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 35 2.92399 3.55362 0.12096 3.45477 35 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 36 0.14640 3.34673 2.78009 3.24524 36 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 37 2.92399 3.55362 0.12096 3.45477 37 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 38 3.39443 0.13492 3.44551 2.80075 38 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 39 2.92399 3.55362 0.12096 3.45477 39 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 40 3.05488 2.57367 3.10432 0.18421 40 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 41 3.39443 0.13492 3.44551 2.80075 41 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 42 3.39443 0.13492 3.44551 2.80075 42 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 43 2.92399 3.55362 0.12096 3.45477 43 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 44 3.05488 2.57367 3.10432 0.18421 44 - - 1.38629 1.38629 1.38629 1.38629 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547 45 2.92399 3.55362 0.12096 3.45477 45 - - 1.38629 1.38629 1.38629 1.38629 0.01898 3.97401 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoj_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:35:54 2012 NSEQ 5 EFFN 3.315430 CKSUM 1914285711 STATS LOCAL MSV -8.1077 0.71931 STATS LOCAL VITERBI -7.6269 0.71931 STATS LOCAL FORWARD -4.2009 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81863 1.16585 1.08606 1.66839 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 0.00000 * 1 2.94591 3.58540 0.11742 3.48982 1 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 2 3.43043 0.13053 3.48000 2.82705 2 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 3 2.94591 3.58540 0.11742 3.48982 3 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 4 3.43043 0.13053 3.48000 2.82705 4 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 5 3.43043 0.13053 3.48000 2.82705 5 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 6 2.43265 0.73484 2.50519 1.04710 6 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 7 2.94591 3.58540 0.11742 3.48982 7 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 8 0.14220 3.37794 2.80041 3.27938 8 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 9 2.94591 3.58540 0.11742 3.48982 9 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 10 2.94591 3.58540 0.11742 3.48982 10 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 11 3.43043 0.13053 3.48000 2.82705 11 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 12 3.08626 2.59365 3.13451 0.17906 12 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 13 3.43043 0.13053 3.48000 2.82705 13 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 14 2.94591 3.58540 0.11742 3.48982 14 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 15 3.08626 2.59365 3.13451 0.17906 15 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 16 0.14220 3.37794 2.80041 3.27938 16 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 17 3.43043 0.13053 3.48000 2.82705 17 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 18 3.43043 0.13053 3.48000 2.82705 18 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 19 2.94591 3.58540 0.11742 3.48982 19 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 20 0.14220 3.37794 2.80041 3.27938 20 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 21 2.94591 3.58540 0.11742 3.48982 21 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 22 2.94591 3.58540 0.11742 3.48982 22 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 23 2.94591 3.58540 0.11742 3.48982 23 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 24 3.43043 0.13053 3.48000 2.82705 24 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 25 0.14220 3.37794 2.80041 3.27938 25 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 26 3.08626 2.59365 3.13451 0.17906 26 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 27 2.94591 3.58540 0.11742 3.48982 27 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 28 2.44453 1.19261 2.51493 0.63689 28 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 29 3.43043 0.13053 3.48000 2.82705 29 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 30 3.08626 2.59365 3.13451 0.17906 30 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 31 2.94591 3.58540 0.11742 3.48982 31 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 32 3.08626 2.59365 3.13451 0.17906 32 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 33 3.43043 0.13053 3.48000 2.82705 33 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 34 3.08626 2.59365 3.13451 0.17906 34 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 35 2.94591 3.58540 0.11742 3.48982 35 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 36 0.14220 3.37794 2.80041 3.27938 36 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 37 2.94591 3.58540 0.11742 3.48982 37 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 38 3.43043 0.13053 3.48000 2.82705 38 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 39 2.94591 3.58540 0.11742 3.48982 39 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 40 3.08626 2.59365 3.13451 0.17906 40 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 41 3.43043 0.13053 3.48000 2.82705 41 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 42 3.43043 0.13053 3.48000 2.82705 42 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 43 0.14220 3.37794 2.80041 3.27938 43 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 44 3.43043 0.13053 3.48000 2.82705 44 - - 1.38629 1.38629 1.38629 1.38629 0.03694 4.01013 4.01013 1.46634 0.26236 1.09861 0.40547 45 2.94591 3.58540 0.11742 3.48982 45 - - 1.38629 1.38629 1.38629 1.38629 0.01864 3.99184 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twok_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:02 2012 NSEQ 7 EFFN 3.168457 CKSUM 4015894505 STATS LOCAL MSV -8.1875 0.71932 STATS LOCAL VITERBI -7.6009 0.71932 STATS LOCAL FORWARD -4.1596 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93262 1.20466 1.14638 1.43694 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 0.00000 * 1 2.91185 3.53609 0.12297 3.43546 1 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 2 3.37463 0.13741 3.42653 2.78623 2 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 3 2.91185 3.53609 0.12297 3.43546 3 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 4 3.37463 0.13741 3.42653 2.78623 4 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 5 3.37463 0.13741 3.42653 2.78623 5 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 6 3.37463 0.13741 3.42653 2.78623 6 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 7 2.91185 3.53609 0.12297 3.43546 7 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 8 0.14877 3.32959 2.76888 3.22651 8 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 9 2.91185 3.53609 0.12297 3.43546 9 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 10 2.91185 3.53609 0.12297 3.43546 10 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 11 3.37463 0.13741 3.42653 2.78623 11 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 12 3.03775 2.56273 3.08783 0.18710 12 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 13 3.37463 0.13741 3.42653 2.78623 13 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 14 3.03775 2.56273 3.08783 0.18710 14 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 15 3.03775 2.56273 3.08783 0.18710 15 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 16 0.14877 3.32959 2.76888 3.22651 16 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 17 3.37463 0.13741 3.42653 2.78623 17 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 18 3.37463 0.13741 3.42653 2.78623 18 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 19 2.91185 3.53609 0.12297 3.43546 19 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 20 0.14877 3.32959 2.76888 3.22651 20 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 21 2.91185 3.53609 0.12297 3.43546 21 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 22 2.91185 3.53609 0.12297 3.43546 22 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 23 2.91185 3.53609 0.12297 3.43546 23 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 24 3.37463 0.13741 3.42653 2.78623 24 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 25 0.14877 3.32959 2.76888 3.22651 25 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 26 3.03775 2.56273 3.08783 0.18710 26 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 27 2.91185 3.53609 0.12297 3.43546 27 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 28 3.03775 2.56273 3.08783 0.18710 28 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 29 3.37463 0.13741 3.42653 2.78623 29 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 30 3.03775 2.56273 3.08783 0.18710 30 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 31 2.91185 3.53609 0.12297 3.43546 31 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 32 3.03775 2.56273 3.08783 0.18710 32 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 33 3.37463 0.13741 3.42653 2.78623 33 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 34 3.03775 2.56273 3.08783 0.18710 34 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 35 2.91185 3.53609 0.12297 3.43546 35 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 36 0.14877 3.32959 2.76888 3.22651 36 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 37 2.91185 3.53609 0.12297 3.43546 37 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 38 3.37463 0.13741 3.42653 2.78623 38 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 39 2.91185 3.53609 0.12297 3.43546 39 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 40 3.03775 2.56273 3.08783 0.18710 40 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 41 3.37463 0.13741 3.42653 2.78623 41 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 42 3.37463 0.13741 3.42653 2.78623 42 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 43 3.03775 2.56273 3.08783 0.18710 43 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 44 3.03775 2.56273 3.08783 0.18710 44 - - 1.38629 1.38629 1.38629 1.38629 0.03797 3.98313 3.98313 1.46634 0.26236 1.09861 0.40547 45 2.91185 3.53609 0.12297 3.43546 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96432 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twol_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:10 2012 NSEQ 2 EFFN 2.000000 CKSUM 644527050 STATS LOCAL MSV -7.6467 0.72740 STATS LOCAL VITERBI -8.2973 0.72740 STATS LOCAL FORWARD -3.3814 0.72740 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82981 1.24206 1.12275 1.48995 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53331 3.02441 0.20344 2.88069 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twom_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:19 2012 NSEQ 5 EFFN 3.168945 CKSUM 3208013427 STATS LOCAL MSV -8.2354 0.71934 STATS LOCAL VITERBI -7.7805 0.71934 STATS LOCAL FORWARD -4.1144 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82194 1.26345 1.14443 1.43882 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 0.00000 * 1 2.91196 3.53626 0.12295 3.43565 1 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 2 3.37482 0.13738 3.42671 2.78637 2 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 3 2.91196 3.53626 0.12295 3.43565 3 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 4 3.37482 0.13738 3.42671 2.78637 4 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 5 3.37482 0.13738 3.42671 2.78637 5 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 6 3.37482 0.13738 3.42671 2.78637 6 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 7 2.91196 3.53626 0.12295 3.43565 7 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 8 0.14875 3.32976 2.76899 3.22669 8 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 9 2.91196 3.53626 0.12295 3.43565 9 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 10 2.91196 3.53626 0.12295 3.43565 10 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 11 3.37482 0.13738 3.42671 2.78637 11 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 12 3.03791 2.56284 3.08799 0.18707 12 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 13 3.03791 2.56284 3.08799 0.18707 13 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 14 3.03791 2.56284 3.08799 0.18707 14 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 15 3.03791 2.56284 3.08799 0.18707 15 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 16 0.14875 3.32976 2.76899 3.22669 16 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 17 3.37482 0.13738 3.42671 2.78637 17 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 18 3.37482 0.13738 3.42671 2.78637 18 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 19 2.91196 3.53626 0.12295 3.43565 19 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 20 0.14875 3.32976 2.76899 3.22669 20 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 21 2.91196 3.53626 0.12295 3.43565 21 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 22 2.91196 3.53626 0.12295 3.43565 22 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 23 2.91196 3.53626 0.12295 3.43565 23 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 24 3.37482 0.13738 3.42671 2.78637 24 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 25 0.14875 3.32976 2.76899 3.22669 25 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 26 3.03791 2.56284 3.08799 0.18707 26 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 27 2.91196 3.53626 0.12295 3.43565 27 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 28 3.03791 2.56284 3.08799 0.18707 28 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 29 3.37482 0.13738 3.42671 2.78637 29 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 30 3.03791 2.56284 3.08799 0.18707 30 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 31 2.91196 3.53626 0.12295 3.43565 31 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 32 3.03791 2.56284 3.08799 0.18707 32 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 33 3.37482 0.13738 3.42671 2.78637 33 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 34 3.03791 2.56284 3.08799 0.18707 34 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 35 2.91196 3.53626 0.12295 3.43565 35 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 36 0.14875 3.32976 2.76899 3.22669 36 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 37 2.91196 3.53626 0.12295 3.43565 37 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 38 3.37482 0.13738 3.42671 2.78637 38 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 39 2.91196 3.53626 0.12295 3.43565 39 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 40 3.03791 2.56284 3.08799 0.18707 40 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 41 3.37482 0.13738 3.42671 2.78637 41 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 42 3.37482 0.13738 3.42671 2.78637 42 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 43 0.14875 3.32976 2.76899 3.22669 43 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 44 3.03791 2.56284 3.08799 0.18707 44 - - 1.38629 1.38629 1.38629 1.38629 0.03796 3.98322 3.98322 1.46634 0.26236 1.09861 0.40547 45 2.91196 3.53626 0.12295 3.43565 45 - - 1.38629 1.38629 1.38629 1.38629 0.01916 3.96442 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twon_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:26 2012 NSEQ 3 EFFN 3.000000 CKSUM 1433831041 STATS LOCAL MSV -8.1598 0.71994 STATS LOCAL VITERBI -7.7732 0.71994 STATS LOCAL FORWARD -4.1128 0.71994 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81554 1.21056 1.14731 1.50629 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoo_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:34 2012 NSEQ 2 EFFN 2.000000 CKSUM 163887748 STATS LOCAL MSV -7.5850 0.72714 STATS LOCAL VITERBI -8.2317 0.72714 STATS LOCAL FORWARD -3.5245 0.72714 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.82690 1.29897 1.03409 1.55719 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.53331 3.02441 0.20344 2.88069 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twop_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:42 2012 NSEQ 3 EFFN 3.000000 CKSUM 1237938417 STATS LOCAL MSV -7.9602 0.71991 STATS LOCAL VITERBI -7.6581 0.71991 STATS LOCAL FORWARD -4.0925 0.71991 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.81297 1.27097 1.09445 1.50712 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 2.97980 2.52563 3.03204 0.19727 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 3.30705 0.14631 3.36166 2.73626 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twoq_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:51 2012 NSEQ 2 EFFN 2.000000 CKSUM 1217683786 STATS LOCAL MSV -7.4909 0.72753 STATS LOCAL VITERBI -8.2720 0.72753 STATS LOCAL FORWARD -3.6887 0.72753 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.74092 1.34564 1.11983 1.43577 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.57915 2.25909 2.64442 0.28946 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.57915 2.25909 2.64442 0.28946 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.57915 2.25909 2.64442 0.28946 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.81865 0.23582 2.88868 2.35662 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.53331 3.02441 0.20344 2.88069 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twor_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:36:57 2012 NSEQ 381 EFFN 3.118996 CKSUM 3010216746 STATS LOCAL MSV -8.2812 0.71931 STATS LOCAL VITERBI -7.9258 0.71931 STATS LOCAL FORWARD -3.5872 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.93097 1.06146 1.09757 1.74090 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 0.00000 * 1 2.89985 3.51884 0.12499 3.41648 1 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 2 3.35520 0.13990 3.40789 2.77192 2 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 3 2.89985 3.51884 0.12499 3.41648 3 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 4 3.35520 0.13990 3.40789 2.77192 4 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 5 3.35520 0.13990 3.40789 2.77192 5 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 6 3.35520 0.13990 3.40789 2.77192 6 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 7 2.89985 3.51884 0.12499 3.41648 7 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 8 0.15114 3.31278 2.75786 3.20814 8 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 9 2.89985 3.51884 0.12499 3.41648 9 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 10 2.89985 3.51884 0.12499 3.41648 10 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 11 3.28568 0.15570 3.34009 2.64040 11 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 12 3.02100 2.55203 3.07171 0.18997 12 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 13 3.02100 2.55203 3.07171 0.18997 13 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 14 2.89985 3.51884 0.12499 3.41648 14 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 15 3.02100 2.55203 3.07171 0.18997 15 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 16 3.35520 0.13990 3.40789 2.77192 16 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 17 3.35520 0.13990 3.40789 2.77192 17 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 18 3.35520 0.13990 3.40789 2.77192 18 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 19 2.67361 3.40631 0.14975 3.29928 19 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 20 0.15114 3.31278 2.75786 3.20814 20 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 21 2.89985 3.51884 0.12499 3.41648 21 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 22 2.89985 3.51884 0.12499 3.41648 22 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 23 2.89985 3.51884 0.12499 3.41648 23 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 24 3.35520 0.13990 3.40789 2.77192 24 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 25 0.15114 3.31278 2.75786 3.20814 25 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 26 3.02100 2.55203 3.07171 0.18997 26 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 27 2.89985 3.51884 0.12499 3.41648 27 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 28 3.27238 0.15886 3.32714 2.61634 28 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 29 3.35520 0.13990 3.40789 2.77192 29 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 30 3.02100 2.55203 3.07171 0.18997 30 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 31 2.89985 3.51884 0.12499 3.41648 31 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 32 3.29487 0.15354 3.34904 2.65722 32 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 33 3.35520 0.13990 3.40789 2.77192 33 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 34 3.02100 2.55203 3.07171 0.18997 34 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 35 2.89985 3.51884 0.12499 3.41648 35 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 36 0.15114 3.31278 2.75786 3.20814 36 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 37 2.89985 3.51884 0.12499 3.41648 37 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 38 3.35520 0.13990 3.40789 2.77192 38 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 39 2.89985 3.51884 0.12499 3.41648 39 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 40 3.02100 2.55203 3.07171 0.18997 40 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 41 3.35520 0.13990 3.40789 2.77192 41 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 42 0.15114 3.31278 2.75786 3.20814 42 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 43 3.35520 0.13990 3.40789 2.77192 43 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 44 3.25363 0.16339 3.30892 2.58292 44 - - 1.38629 1.38629 1.38629 1.38629 0.03833 3.97387 3.97387 1.46634 0.26236 1.09861 0.40547 45 2.89985 3.51884 0.12499 3.41648 45 - - 1.38629 1.38629 1.38629 1.38629 0.01935 3.95489 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twos_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:37:03 2012 NSEQ 3 EFFN 3.000000 CKSUM 2079554623 STATS LOCAL MSV -8.0923 0.71963 STATS LOCAL VITERBI -7.8815 0.71963 STATS LOCAL FORWARD -3.7154 0.71963 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92700 1.06154 1.09883 1.74164 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 0.15719 3.27118 2.73043 3.16274 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 3.30705 0.14631 3.36166 2.73626 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.86982 3.47591 0.13017 3.36931 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 3.30705 0.14631 3.36166 2.73626 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twot_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:37:10 2012 NSEQ 3 EFFN 3.000000 CKSUM 1228495162 STATS LOCAL MSV -8.0485 0.71986 STATS LOCAL VITERBI -7.8652 0.71986 STATS LOCAL FORWARD -3.8213 0.71986 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.91826 1.26987 1.04606 1.50981 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 3.30705 0.14631 3.36166 2.73626 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.86982 3.47591 0.13017 3.36931 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.97980 2.52563 3.03204 0.19727 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 2.97980 2.52563 3.03204 0.19727 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.97980 2.52563 3.03204 0.19727 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.86982 3.47591 0.13017 3.36931 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twou_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:37:17 2012 NSEQ 3 EFFN 3.000000 CKSUM 373476516 STATS LOCAL MSV -8.0655 0.71980 STATS LOCAL VITERBI -7.9691 0.71980 STATS LOCAL FORWARD -3.6833 0.71980 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.92304 1.15872 1.09717 1.57922 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 3.30705 0.14631 3.36166 2.73626 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.86982 3.47591 0.13017 3.36931 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 3.30705 0.14631 3.36166 2.73626 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 3.30705 0.14631 3.36166 2.73626 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 3.30705 0.14631 3.36166 2.73626 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.86982 3.47591 0.13017 3.36931 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 0.15719 3.27118 2.73043 3.16274 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.86982 3.47591 0.13017 3.36931 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 2.86982 3.47591 0.13017 3.36931 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.97980 2.52563 3.03204 0.19727 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.97980 2.52563 3.03204 0.19727 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.97980 2.52563 3.03204 0.19727 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.97980 2.52563 3.03204 0.19727 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 3.30705 0.14631 3.36166 2.73626 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 3.30705 0.14631 3.36166 2.73626 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.86982 3.47591 0.13017 3.36931 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 2.86982 3.47591 0.13017 3.36931 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.86982 3.47591 0.13017 3.36931 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 0.15719 3.27118 2.73043 3.16274 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.97980 2.52563 3.03204 0.19727 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.86982 3.47591 0.13017 3.36931 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.97980 2.52563 3.03204 0.19727 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.86982 3.47591 0.13017 3.36931 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 3.30705 0.14631 3.36166 2.73626 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 3.30705 0.14631 3.36166 2.73626 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.97980 2.52563 3.03204 0.19727 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 0.15719 3.27118 2.73043 3.16274 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.86982 3.47591 0.13017 3.36931 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 3.30705 0.14631 3.36166 2.73626 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 2.86982 3.47591 0.13017 3.36931 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 2.97980 2.52563 3.03204 0.19727 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 3.30705 0.14631 3.36166 2.73626 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 0.15719 3.27118 2.73043 3.16274 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 3.30705 0.14631 3.36166 2.73626 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 3.30705 0.14631 3.36166 2.73626 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.86982 3.47591 0.13017 3.36931 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 3_End_Marchantiophyta_58S_end_twox_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 17:37:24 2012 NSEQ 2 EFFN 2.000000 CKSUM 2845665714 STATS LOCAL MSV -7.6619 0.72718 STATS LOCAL VITERBI -8.4364 0.72718 STATS LOCAL FORWARD -3.1326 0.72718 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.83385 1.15118 1.12465 1.61359 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.53331 3.02441 0.20344 2.88069 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.53331 3.02441 0.20344 2.88069 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.81865 0.23582 2.88868 2.35662 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.81865 0.23582 2.88868 2.35662 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.81865 0.23582 2.88868 2.35662 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.53331 3.02441 0.20344 2.88069 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.23862 2.84929 2.43386 2.70756 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.53331 3.02441 0.20344 2.88069 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.53331 3.02441 0.20344 2.88069 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.81865 0.23582 2.88868 2.35662 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.57915 2.25909 2.64442 0.28946 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.81865 0.23582 2.88868 2.35662 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.53331 3.02441 0.20344 2.88069 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.57915 2.25909 2.64442 0.28946 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.81865 0.23582 2.88868 2.35662 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.81865 0.23582 2.88868 2.35662 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.81865 0.23582 2.88868 2.35662 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.53331 3.02441 0.20344 2.88069 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.53331 3.02441 0.20344 2.88069 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.23862 2.84929 2.43386 2.70756 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.57915 2.25909 2.64442 0.28946 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.53331 3.02441 0.20344 2.88069 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.57915 2.25909 2.64442 0.28946 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.53331 3.02441 0.20344 2.88069 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.81865 0.23582 2.88868 2.35662 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.57915 2.25909 2.64442 0.28946 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.23862 2.84929 2.43386 2.70756 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.53331 3.02441 0.20344 2.88069 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.81865 0.23582 2.88868 2.35662 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.53331 3.02441 0.20344 2.88069 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.57915 2.25909 2.64442 0.28946 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.23862 2.84929 2.43386 2.70756 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.57915 2.25909 2.64442 0.28946 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53331 3.02441 0.20344 2.88069 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.81865 0.23582 2.88868 2.35662 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.57915 2.25909 2.64442 0.28946 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 2_5.8_Marchantiophyta_58S_start_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 24 11:17:40 2012 NSEQ 727 EFFN 3.469379 CKSUM 3115831225 STATS LOCAL MSV -7.5086 0.71932 STATS LOCAL VITERBI -7.5251 0.71932 STATS LOCAL FORWARD -4.0424 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.26902 1.34994 1.43847 1.50352 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 0.00000 * 1 2.11695 0.76692 1.75306 1.41917 1 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 2 2.87784 3.58971 0.12120 3.49715 2 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 3 0.13599 3.42610 2.83161 3.33214 3 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 4 3.48585 0.12409 3.53304 2.86723 4 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 5 3.13512 2.62469 3.18149 0.17136 5 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 6 3.48585 0.12409 3.53304 2.86723 6 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 7 3.13512 2.62469 3.18149 0.17136 7 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 8 3.48585 0.12409 3.53304 2.86723 8 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 9 0.14976 3.37255 2.70286 3.27615 9 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 10 2.97924 3.63406 0.11222 3.54358 10 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 11 3.48585 0.12409 3.53304 2.86723 11 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 12 0.13599 3.42610 2.83161 3.33214 12 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 13 0.13599 3.42610 2.83161 3.33214 13 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 14 3.48585 0.12409 3.53304 2.86723 14 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 15 2.97924 3.63406 0.11222 3.54358 15 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 16 2.97924 3.63406 0.11222 3.54358 16 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 17 0.13599 3.42610 2.83161 3.33214 17 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 18 3.13512 2.62469 3.18149 0.17136 18 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 19 0.13599 3.42610 2.83161 3.33214 19 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 20 3.13512 2.62469 3.18149 0.17136 20 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 21 3.48585 0.12409 3.53304 2.86723 21 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 22 3.13512 2.62469 3.18149 0.17136 22 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 23 2.99355 2.40996 2.97280 0.21207 23 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 24 2.97924 3.63406 0.11222 3.54358 24 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 25 2.97924 3.63406 0.11222 3.54358 25 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 26 3.48585 0.12409 3.53304 2.86723 26 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 27 3.13512 2.62469 3.18149 0.17136 27 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 28 3.48585 0.12409 3.53304 2.86723 28 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 29 2.90255 2.09775 2.95785 0.26077 29 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 30 3.01545 2.33722 3.06631 0.21346 30 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 31 2.93739 3.42661 0.12487 3.44547 31 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 32 3.48585 0.12409 3.53304 2.86723 32 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 33 0.13599 3.42610 2.83161 3.33214 33 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 34 0.13599 3.42610 2.83161 3.33214 34 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 35 3.48585 0.12409 3.53304 2.86723 35 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 36 2.97924 3.63406 0.11222 3.54358 36 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 37 0.13599 3.42610 2.83161 3.33214 37 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 38 3.13512 2.62469 3.18149 0.17136 38 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 39 2.97924 3.63406 0.11222 3.54358 39 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 40 0.13599 3.42610 2.83161 3.33214 40 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 41 0.13599 3.42610 2.83161 3.33214 41 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 42 2.97924 3.63406 0.11222 3.54358 42 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 43 0.13599 3.42610 2.83161 3.33214 43 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 44 0.13599 3.42610 2.83161 3.33214 44 - - 1.38629 1.38629 1.38629 1.38629 0.03591 4.03766 4.03766 1.46634 0.26236 1.09861 0.40547 45 3.48585 0.12409 3.53304 2.86723 45 - - 1.38629 1.38629 1.38629 1.38629 0.01812 4.01987 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_eight_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:42 2012 NSEQ 3 EFFN 3.000000 CKSUM 105693907 STATS LOCAL MSV -8.1416 0.72054 STATS LOCAL VITERBI -7.6064 0.72054 STATS LOCAL FORWARD -3.9951 0.72054 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27697 1.35997 1.37204 1.55656 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.86982 3.47591 0.13017 3.36931 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.97980 2.52563 3.03204 0.19727 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.43223 0.62271 2.50508 1.22417 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_five_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:11 2012 NSEQ 15 EFFN 3.204346 CKSUM 1688665315 STATS LOCAL MSV -8.1859 0.71932 STATS LOCAL VITERBI -7.5786 0.71932 STATS LOCAL FORWARD -4.0935 0.71932 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28069 1.26783 1.45149 1.57749 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 0.00000 * 1 3.04977 2.57040 3.09940 0.18507 1 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 2 3.04977 2.57040 3.09940 0.18507 2 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 3 3.38853 0.13565 3.43985 2.79643 3 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 4 2.92038 3.54839 0.12156 3.44902 4 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 5 2.92038 3.54839 0.12156 3.44902 5 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 6 0.14711 3.34162 2.77675 3.23965 6 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 7 3.38853 0.13565 3.43985 2.79643 7 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 8 3.38853 0.13565 3.43985 2.79643 8 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 9 3.04977 2.57040 3.09940 0.18507 9 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 10 3.38853 0.13565 3.43985 2.79643 10 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 11 0.14711 3.34162 2.77675 3.23965 11 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 12 2.92038 3.54839 0.12156 3.44902 12 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 13 0.14711 3.34162 2.77675 3.23965 13 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 14 3.04977 2.57040 3.09940 0.18507 14 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 15 3.38853 0.13565 3.43985 2.79643 15 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 16 0.14711 3.34162 2.77675 3.23965 16 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 17 2.92038 3.54839 0.12156 3.44902 17 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 18 2.92038 3.54839 0.12156 3.44902 18 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 19 3.38853 0.13565 3.43985 2.79643 19 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 20 0.14711 3.34162 2.77675 3.23965 20 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 21 0.14711 3.34162 2.77675 3.23965 21 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 22 2.92038 3.54839 0.12156 3.44902 22 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 23 0.14711 3.34162 2.77675 3.23965 23 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 24 3.38853 0.13565 3.43985 2.79643 24 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 25 3.38853 0.13565 3.43985 2.79643 25 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 26 0.14711 3.34162 2.77675 3.23965 26 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 27 3.38853 0.13565 3.43985 2.79643 27 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 28 3.38853 0.13565 3.43985 2.79643 28 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 29 3.38853 0.13565 3.43985 2.79643 29 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 30 2.92038 3.54839 0.12156 3.44902 30 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 31 3.38853 0.13565 3.43985 2.79643 31 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 32 3.04977 2.57040 3.09940 0.18507 32 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 33 2.92038 3.54839 0.12156 3.44902 33 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 34 0.14711 3.34162 2.77675 3.23965 34 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 35 2.92038 3.54839 0.12156 3.44902 35 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 36 3.04977 2.57040 3.09940 0.18507 36 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 37 3.04977 2.57040 3.09940 0.18507 37 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 38 3.04977 2.57040 3.09940 0.18507 38 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 39 0.14711 3.34162 2.77675 3.23965 39 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 40 0.14711 3.34162 2.77675 3.23965 40 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 41 2.92038 3.54839 0.12156 3.44902 41 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 42 3.38853 0.13565 3.43985 2.79643 42 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 43 0.14711 3.34162 2.77675 3.23965 43 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 44 3.04977 2.57040 3.09940 0.18507 44 - - 1.38629 1.38629 1.38629 1.38629 0.03771 3.98979 3.98979 1.46634 0.26236 1.09861 0.40547 45 0.14711 3.34162 2.77675 3.23965 45 - - 1.38629 1.38629 1.38629 1.38629 0.01903 3.97111 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_four_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:03 2012 NSEQ 6 EFFN 3.196289 CKSUM 96037354 STATS LOCAL MSV -8.2136 0.71931 STATS LOCAL VITERBI -7.6391 0.71931 STATS LOCAL FORWARD -4.0258 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.22379 1.20916 1.52738 1.65897 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 0.00000 * 1 3.38542 0.13604 3.43688 2.79415 1 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 2 3.04708 2.56869 3.09681 0.18552 2 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 3 3.38542 0.13604 3.43688 2.79415 3 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 4 2.91847 3.54565 0.12187 3.44599 4 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 5 2.91847 3.54565 0.12187 3.44599 5 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 6 0.14748 3.33893 2.77499 3.23671 6 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 7 3.38542 0.13604 3.43688 2.79415 7 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 8 3.38542 0.13604 3.43688 2.79415 8 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 9 3.04708 2.56869 3.09681 0.18552 9 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 10 3.38542 0.13604 3.43688 2.79415 10 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 11 0.14748 3.33893 2.77499 3.23671 11 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 12 2.91847 3.54565 0.12187 3.44599 12 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 13 0.14748 3.33893 2.77499 3.23671 13 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 14 3.04708 2.56869 3.09681 0.18552 14 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 15 3.38542 0.13604 3.43688 2.79415 15 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 16 0.14748 3.33893 2.77499 3.23671 16 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 17 2.91847 3.54565 0.12187 3.44599 17 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 18 0.14748 3.33893 2.77499 3.23671 18 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 19 3.38542 0.13604 3.43688 2.79415 19 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 20 0.14748 3.33893 2.77499 3.23671 20 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 21 0.14748 3.33893 2.77499 3.23671 21 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 22 2.91847 3.54565 0.12187 3.44599 22 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 23 0.14748 3.33893 2.77499 3.23671 23 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 24 3.38542 0.13604 3.43688 2.79415 24 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 25 3.38542 0.13604 3.43688 2.79415 25 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 26 0.14748 3.33893 2.77499 3.23671 26 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 27 3.38542 0.13604 3.43688 2.79415 27 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 28 3.38542 0.13604 3.43688 2.79415 28 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 29 3.38542 0.13604 3.43688 2.79415 29 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 30 2.91847 3.54565 0.12187 3.44599 30 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 31 3.38542 0.13604 3.43688 2.79415 31 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 32 3.04708 2.56869 3.09681 0.18552 32 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 33 2.91847 3.54565 0.12187 3.44599 33 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 34 0.14748 3.33893 2.77499 3.23671 34 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 35 2.91847 3.54565 0.12187 3.44599 35 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 36 3.04708 2.56869 3.09681 0.18552 36 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 37 3.04708 2.56869 3.09681 0.18552 37 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 38 3.04708 2.56869 3.09681 0.18552 38 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 39 0.14748 3.33893 2.77499 3.23671 39 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 40 0.14748 3.33893 2.77499 3.23671 40 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 41 2.91847 3.54565 0.12187 3.44599 41 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 42 3.38542 0.13604 3.43688 2.79415 42 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 43 0.14748 3.33893 2.77499 3.23671 43 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 44 3.04708 2.56869 3.09681 0.18552 44 - - 1.38629 1.38629 1.38629 1.38629 0.03777 3.98830 3.98830 1.46634 0.26236 1.09861 0.40547 45 0.14748 3.33893 2.77499 3.23671 45 - - 1.38629 1.38629 1.38629 1.38629 0.01906 3.96959 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_nine_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:52 2012 NSEQ 2 EFFN 2.000000 CKSUM 647530765 STATS LOCAL MSV -7.4739 0.72783 STATS LOCAL VITERBI -8.0723 0.72783 STATS LOCAL FORWARD -3.4690 0.72783 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.23999 1.34853 1.43256 1.54979 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.81865 0.23582 2.88868 2.35662 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.57915 2.25909 2.64442 0.28946 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.23862 2.84929 2.43386 2.70756 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.23862 2.84929 2.43386 2.70756 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.23862 2.84929 2.43386 2.70756 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.57915 2.25909 2.64442 0.28946 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.81865 0.23582 2.88868 2.35662 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.57915 2.25909 2.64442 0.28946 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.53331 3.02441 0.20344 2.88069 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_one_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:25:39 2012 NSEQ 20 EFFN 3.540039 CKSUM 3998707778 STATS LOCAL MSV -7.6760 0.71934 STATS LOCAL VITERBI -7.5419 0.71934 STATS LOCAL FORWARD -4.1193 0.71934 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27980 1.23983 1.44541 1.62545 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 0.00000 * 1 2.46911 0.73562 2.54114 1.02903 1 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 2 3.15689 2.63850 3.20241 0.16805 2 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 3 3.11759 0.21933 3.17647 2.19873 3 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 4 2.99379 3.65542 0.11002 3.56722 4 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 5 2.99379 3.65542 0.11002 3.56722 5 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 6 0.13334 3.44739 2.84535 3.35549 6 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 7 3.51029 0.12137 3.55641 2.88485 7 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 8 3.51029 0.12137 3.55641 2.88485 8 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 9 3.15689 2.63850 3.20241 0.16805 9 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 10 3.51029 0.12137 3.55641 2.88485 10 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 11 0.13334 3.44739 2.84535 3.35549 11 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 12 2.99379 3.65542 0.11002 3.56722 12 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 13 0.13334 3.44739 2.84535 3.35549 13 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 14 3.15689 2.63850 3.20241 0.16805 14 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 15 3.51029 0.12137 3.55641 2.88485 15 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 16 0.32078 2.91982 1.83681 2.79446 16 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 17 2.99379 3.65542 0.11002 3.56722 17 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 18 2.33938 3.31208 0.19059 3.20151 18 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 19 3.51029 0.12137 3.55641 2.88485 19 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 20 0.13334 3.44739 2.84535 3.35549 20 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 21 0.13334 3.44739 2.84535 3.35549 21 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 22 2.99379 3.65542 0.11002 3.56722 22 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 23 0.13334 3.44739 2.84535 3.35549 23 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 24 3.51029 0.12137 3.55641 2.88485 24 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 25 3.10712 0.22270 3.16631 2.18250 25 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 26 0.13334 3.44739 2.84535 3.35549 26 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 27 3.51029 0.12137 3.55641 2.88485 27 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 28 3.51029 0.12137 3.55641 2.88485 28 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 29 3.51029 0.12137 3.55641 2.88485 29 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 30 2.99379 3.65542 0.11002 3.56722 30 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 31 3.51029 0.12137 3.55641 2.88485 31 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 32 2.91081 2.08007 2.96599 0.26249 32 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 33 2.99379 3.65542 0.11002 3.56722 33 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 34 0.13334 3.44739 2.84535 3.35549 34 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 35 2.99379 3.65542 0.11002 3.56722 35 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 36 3.15689 2.63850 3.20241 0.16805 36 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 37 3.15689 2.63850 3.20241 0.16805 37 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 38 3.15689 2.63850 3.20241 0.16805 38 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 39 0.13334 3.44739 2.84535 3.35549 39 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 40 0.13334 3.44739 2.84535 3.35549 40 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 41 2.99379 3.65542 0.11002 3.56722 41 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 42 3.51029 0.12137 3.55641 2.88485 42 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 43 0.13334 3.44739 2.84535 3.35549 43 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 44 3.15689 2.63850 3.20241 0.16805 44 - - 1.38629 1.38629 1.38629 1.38629 0.03546 4.05005 4.05005 1.46634 0.26236 1.09861 0.40547 45 0.13334 3.44739 2.84535 3.35549 45 - - 1.38629 1.38629 1.38629 1.38629 0.01789 4.03248 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_seven_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:33 2012 NSEQ 7 EFFN 3.188965 CKSUM 2453683499 STATS LOCAL MSV -8.1588 0.71933 STATS LOCAL VITERBI -7.6809 0.71933 STATS LOCAL FORWARD -4.0969 0.71933 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34227 1.26850 1.38186 1.57801 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 0.00000 * 1 3.04463 2.56713 3.09446 0.18593 1 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 2 3.04463 2.56713 3.09446 0.18593 2 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 3 3.38259 0.13640 3.43416 2.79207 3 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 4 2.91674 3.54314 0.12216 3.44323 4 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 5 2.91674 3.54314 0.12216 3.44323 5 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 6 0.14782 3.33648 2.77339 3.23404 6 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 7 3.38259 0.13640 3.43416 2.79207 7 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 8 3.38259 0.13640 3.43416 2.79207 8 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 9 3.04463 2.56713 3.09446 0.18593 9 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 10 3.38259 0.13640 3.43416 2.79207 10 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 11 0.14782 3.33648 2.77339 3.23404 11 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 12 2.91674 3.54314 0.12216 3.44323 12 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 13 0.14782 3.33648 2.77339 3.23404 13 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 14 3.04463 2.56713 3.09446 0.18593 14 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 15 3.38259 0.13640 3.43416 2.79207 15 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 16 2.91674 3.54314 0.12216 3.44323 16 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 17 2.91674 3.54314 0.12216 3.44323 17 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 18 2.91674 3.54314 0.12216 3.44323 18 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 19 3.38259 0.13640 3.43416 2.79207 19 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 20 0.14782 3.33648 2.77339 3.23404 20 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 21 0.14782 3.33648 2.77339 3.23404 21 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 22 2.91674 3.54314 0.12216 3.44323 22 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 23 0.14782 3.33648 2.77339 3.23404 23 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 24 3.38259 0.13640 3.43416 2.79207 24 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 25 3.38259 0.13640 3.43416 2.79207 25 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 26 0.14782 3.33648 2.77339 3.23404 26 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 27 3.38259 0.13640 3.43416 2.79207 27 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 28 3.38259 0.13640 3.43416 2.79207 28 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 29 3.38259 0.13640 3.43416 2.79207 29 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 30 2.91674 3.54314 0.12216 3.44323 30 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 31 3.38259 0.13640 3.43416 2.79207 31 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 32 3.04463 2.56713 3.09446 0.18593 32 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 33 2.91674 3.54314 0.12216 3.44323 33 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 34 0.14782 3.33648 2.77339 3.23404 34 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 35 2.91674 3.54314 0.12216 3.44323 35 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 36 3.04463 2.56713 3.09446 0.18593 36 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 37 3.04463 2.56713 3.09446 0.18593 37 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 38 3.04463 2.56713 3.09446 0.18593 38 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 39 0.14782 3.33648 2.77339 3.23404 39 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 40 0.14782 3.33648 2.77339 3.23404 40 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 41 2.91674 3.54314 0.12216 3.44323 41 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 42 3.38259 0.13640 3.43416 2.79207 42 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 43 0.14782 3.33648 2.77339 3.23404 43 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 44 3.04463 2.56713 3.09446 0.18593 44 - - 1.38629 1.38629 1.38629 1.38629 0.03782 3.98694 3.98694 1.46634 0.26236 1.09861 0.40547 45 0.14782 3.33648 2.77339 3.23404 45 - - 1.38629 1.38629 1.38629 1.38629 0.01909 3.96821 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_six_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:26:23 2012 NSEQ 3 EFFN 3.000000 CKSUM 4290214155 STATS LOCAL MSV -8.1730 0.72006 STATS LOCAL VITERBI -7.7143 0.72006 STATS LOCAL FORWARD -3.8565 0.72006 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28332 1.21312 1.45038 1.65477 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 3.30705 0.14631 3.36166 2.73626 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 2.86982 3.47591 0.13017 3.36931 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.15719 3.27118 2.73043 3.16274 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 3.30705 0.14631 3.36166 2.73626 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_ten_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:27:01 2012 NSEQ 2 EFFN 2.000000 CKSUM 817679163 STATS LOCAL MSV -7.7131 0.72754 STATS LOCAL VITERBI -8.3485 0.72754 STATS LOCAL FORWARD -3.4669 0.72754 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.34554 1.29909 1.31832 1.61326 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.57915 2.25909 2.64442 0.28946 1 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.81865 0.23582 2.88868 2.35662 2 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.57915 2.25909 2.64442 0.28946 3 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.53331 3.02441 0.20344 2.88069 4 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.53331 3.02441 0.20344 2.88069 5 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.23862 2.84929 2.43386 2.70756 6 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.81865 0.23582 2.88868 2.35662 7 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.81865 0.23582 2.88868 2.35662 8 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.57915 2.25909 2.64442 0.28946 9 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.81865 0.23582 2.88868 2.35662 10 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.53331 3.02441 0.20344 2.88069 11 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.53331 3.02441 0.20344 2.88069 12 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.23862 2.84929 2.43386 2.70756 13 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.57915 2.25909 2.64442 0.28946 14 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.81865 0.23582 2.88868 2.35662 15 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.23862 2.84929 2.43386 2.70756 16 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.53331 3.02441 0.20344 2.88069 17 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.53331 3.02441 0.20344 2.88069 18 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.81865 0.23582 2.88868 2.35662 19 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.23862 2.84929 2.43386 2.70756 20 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.23862 2.84929 2.43386 2.70756 21 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.53331 3.02441 0.20344 2.88069 22 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.53331 3.02441 0.20344 2.88069 23 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.81865 0.23582 2.88868 2.35662 24 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.81865 0.23582 2.88868 2.35662 25 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.23862 2.84929 2.43386 2.70756 26 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.81865 0.23582 2.88868 2.35662 27 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.53331 3.02441 0.20344 2.88069 28 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.81865 0.23582 2.88868 2.35662 29 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.53331 3.02441 0.20344 2.88069 30 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.81865 0.23582 2.88868 2.35662 31 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.81865 0.23582 2.88868 2.35662 32 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.53331 3.02441 0.20344 2.88069 33 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23862 2.84929 2.43386 2.70756 34 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.23862 2.84929 2.43386 2.70756 35 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.57915 2.25909 2.64442 0.28946 36 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.57915 2.25909 2.64442 0.28946 37 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.57915 2.25909 2.64442 0.28946 38 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.23862 2.84929 2.43386 2.70756 39 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.23862 2.84929 2.43386 2.70756 40 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.53331 3.02441 0.20344 2.88069 41 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.81865 0.23582 2.88868 2.35662 42 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.23862 2.84929 2.43386 2.70756 43 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.57915 2.25909 2.64442 0.28946 44 - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.23862 2.84929 2.43386 2.70756 45 - - 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_three_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:25:55 2012 NSEQ 3 EFFN 3.000000 CKSUM 2635444069 STATS LOCAL MSV -8.1670 0.72023 STATS LOCAL VITERBI -7.6237 0.72023 STATS LOCAL FORWARD -4.0458 0.72023 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.28119 1.32936 1.44798 1.50236 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 * 1 2.97980 2.52563 3.03204 0.19727 1 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 2.97980 2.52563 3.03204 0.19727 2 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 3.30705 0.14631 3.36166 2.73626 3 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.86982 3.47591 0.13017 3.36931 4 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.86982 3.47591 0.13017 3.36931 5 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.15719 3.27118 2.73043 3.16274 6 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 3.30705 0.14631 3.36166 2.73626 7 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 3.30705 0.14631 3.36166 2.73626 8 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 2.97980 2.52563 3.03204 0.19727 9 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 3.30705 0.14631 3.36166 2.73626 10 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 0.15719 3.27118 2.73043 3.16274 11 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.86982 3.47591 0.13017 3.36931 12 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 0.15719 3.27118 2.73043 3.16274 13 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.97980 2.52563 3.03204 0.19727 14 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 3.30705 0.14631 3.36166 2.73626 15 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.15719 3.27118 2.73043 3.16274 16 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 2.86982 3.47591 0.13017 3.36931 17 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 2.86982 3.47591 0.13017 3.36931 18 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 3.30705 0.14631 3.36166 2.73626 19 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 0.15719 3.27118 2.73043 3.16274 20 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.15719 3.27118 2.73043 3.16274 21 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.86982 3.47591 0.13017 3.36931 22 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 0.15719 3.27118 2.73043 3.16274 23 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.97980 2.52563 3.03204 0.19727 24 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 3.30705 0.14631 3.36166 2.73626 25 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 0.15719 3.27118 2.73043 3.16274 26 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 3.30705 0.14631 3.36166 2.73626 27 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 3.30705 0.14631 3.36166 2.73626 28 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 3.30705 0.14631 3.36166 2.73626 29 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.86982 3.47591 0.13017 3.36931 30 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 3.30705 0.14631 3.36166 2.73626 31 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.97980 2.52563 3.03204 0.19727 32 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.86982 3.47591 0.13017 3.36931 33 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 0.15719 3.27118 2.73043 3.16274 34 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.86982 3.47591 0.13017 3.36931 35 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 2.97980 2.52563 3.03204 0.19727 36 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.97980 2.52563 3.03204 0.19727 37 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.97980 2.52563 3.03204 0.19727 38 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 39 0.15719 3.27118 2.73043 3.16274 39 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 40 0.15719 3.27118 2.73043 3.16274 40 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.86982 3.47591 0.13017 3.36931 41 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 3.30705 0.14631 3.36166 2.73626 42 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 0.15719 3.27118 2.73043 3.16274 43 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 2.97980 2.52563 3.03204 0.19727 44 - - 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 0.15719 3.27118 2.73043 3.16274 45 - - 1.38629 1.38629 1.38629 1.38629 0.01980 3.93183 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 4_LSU_Marchantiophyta_4_LSU_start_two_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Wed Jan 25 18:25:46 2012 NSEQ 21 EFFN 3.309448 CKSUM 3528604808 STATS LOCAL MSV -8.1581 0.71931 STATS LOCAL VITERBI -7.4789 0.71931 STATS LOCAL FORWARD -4.1423 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.27636 1.38744 1.46044 1.43087 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 0.00000 * 1 3.42822 0.13079 3.47788 2.82543 1 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 2 3.08433 2.59242 3.13264 0.17937 2 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 3 3.08433 2.59242 3.13264 0.17937 3 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 4 2.59337 2.93933 0.25330 2.34244 4 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 5 2.94456 3.58345 0.11763 3.48767 5 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 6 0.14246 3.37602 2.79917 3.27728 6 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 7 3.42822 0.13079 3.47788 2.82543 7 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 8 3.42822 0.13079 3.47788 2.82543 8 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 9 3.08433 2.59242 3.13264 0.17937 9 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 10 3.42822 0.13079 3.47788 2.82543 10 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 11 0.14246 3.37602 2.79917 3.27728 11 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 12 2.94456 3.58345 0.11763 3.48767 12 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 13 0.14246 3.37602 2.79917 3.27728 13 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 14 3.08433 2.59242 3.13264 0.17937 14 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 15 3.42822 0.13079 3.47788 2.82543 15 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 16 0.14246 3.37602 2.79917 3.27728 16 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 17 2.94456 3.58345 0.11763 3.48767 17 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 18 2.94456 3.58345 0.11763 3.48767 18 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 19 3.42822 0.13079 3.47788 2.82543 19 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 20 0.14246 3.37602 2.79917 3.27728 20 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 21 0.14246 3.37602 2.79917 3.27728 21 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 22 2.94456 3.58345 0.11763 3.48767 22 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 23 0.14246 3.37602 2.79917 3.27728 23 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 24 3.08433 2.59242 3.13264 0.17937 24 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 25 3.08433 2.59242 3.13264 0.17937 25 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 26 0.14246 3.37602 2.79917 3.27728 26 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 27 3.42822 0.13079 3.47788 2.82543 27 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 28 3.42822 0.13079 3.47788 2.82543 28 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 29 3.42822 0.13079 3.47788 2.82543 29 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 30 2.94456 3.58345 0.11763 3.48767 30 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 31 3.42822 0.13079 3.47788 2.82543 31 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 32 3.08433 2.59242 3.13264 0.17937 32 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 33 2.94456 3.58345 0.11763 3.48767 33 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 34 0.14246 3.37602 2.79917 3.27728 34 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 35 2.94456 3.58345 0.11763 3.48767 35 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 36 3.08433 2.59242 3.13264 0.17937 36 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 37 3.08433 2.59242 3.13264 0.17937 37 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 38 3.08433 2.59242 3.13264 0.17937 38 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 39 0.14246 3.37602 2.79917 3.27728 39 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 40 0.14246 3.37602 2.79917 3.27728 40 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 41 2.94456 3.58345 0.11763 3.48767 41 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 42 3.42822 0.13079 3.47788 2.82543 42 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 43 0.14246 3.37602 2.79917 3.27728 43 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 44 3.08433 2.59242 3.13264 0.17937 44 - - 1.38629 1.38629 1.38629 1.38629 0.03698 4.00905 4.00905 1.46634 0.26236 1.09861 0.40547 45 0.14246 3.37602 2.79917 3.27728 45 - - 1.38629 1.38629 1.38629 1.38629 0.01866 3.99073 * 1.46634 0.26236 0.00000 * // HMMER3/b [3.0 | March 2010] NAME 1_SSU_Marchantiophyta_1_SSU_end_long LENG 45 ALPH DNA RF no CS no MAP yes DATE Tue Jan 24 11:12:54 2012 NSEQ 199 EFFN 3.227798 CKSUM 1341977593 STATS LOCAL MSV -7.9719 0.71931 STATS LOCAL VITERBI -7.6787 0.71931 STATS LOCAL FORWARD -4.0863 0.71931 HMM A C G T m->m m->i m->d i->m i->i d->m d->d COMPO 1.33255 1.62894 1.18902 1.44588 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 0.00000 * 1 0.14604 3.34940 2.78183 3.24816 1 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 2 2.92588 3.55634 0.12065 3.45778 2 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 3 3.05756 2.57537 3.10690 0.18376 3 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 4 3.39751 0.13454 3.44846 2.80301 4 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 5 2.92588 3.55634 0.12065 3.45778 5 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 6 3.05756 2.57537 3.10690 0.18376 6 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 7 0.14604 3.34940 2.78183 3.24816 7 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 8 0.14604 3.34940 2.78183 3.24816 8 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 9 3.39751 0.13454 3.44846 2.80301 9 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 10 0.14604 3.34940 2.78183 3.24816 10 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 11 0.14604 3.34940 2.78183 3.24816 11 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 12 2.92588 3.55634 0.12065 3.45778 12 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 13 2.92588 3.55634 0.12065 3.45778 13 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 14 3.05756 2.57537 3.10690 0.18376 14 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 15 3.05756 2.57537 3.10690 0.18376 15 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 16 3.05756 2.57537 3.10690 0.18376 16 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 17 3.26849 0.15489 3.20294 2.73664 17 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 18 3.39751 0.13454 3.44846 2.80301 18 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 19 2.92588 3.55634 0.12065 3.45778 19 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 20 3.05756 2.57537 3.10690 0.18376 20 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 21 0.14604 3.34940 2.78183 3.24816 21 - - 1.38629 1.38629 1.38629 1.38629 0.04062 3.99412 3.84540 1.46634 0.26236 1.09861 0.40547 22 2.92212 3.55092 0.12127 3.45180 22 - - 1.38629 1.38629 1.38629 1.38629 0.03766 3.99116 3.99116 1.46634 0.26236 1.00196 0.45754 23 2.92588 3.55634 0.12065 3.45778 23 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 24 3.05756 2.57537 3.10690 0.18376 24 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 25 2.92588 3.55634 0.12065 3.45778 25 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 26 0.14604 3.34940 2.78183 3.24816 26 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 27 0.14604 3.34940 2.78183 3.24816 27 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 28 3.39751 0.13454 3.44846 2.80301 28 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 29 3.39751 0.13454 3.44846 2.80301 29 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 30 3.05756 2.57537 3.10690 0.18376 30 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 31 2.92588 3.55634 0.12065 3.45778 31 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 32 3.39751 0.13454 3.44846 2.80301 32 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 33 2.92588 3.55634 0.12065 3.45778 33 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 34 2.92588 3.55634 0.12065 3.45778 34 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 35 0.14604 3.34940 2.78183 3.24816 35 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 36 0.14604 3.34940 2.78183 3.24816 36 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 37 2.92588 3.55634 0.12065 3.45778 37 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 38 2.92588 3.55634 0.12065 3.45778 38 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 39 0.14604 3.34940 2.78183 3.24816 39 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 40 3.05756 2.57537 3.10690 0.18376 40 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 41 3.39751 0.13454 3.44846 2.80301 41 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 42 0.14604 3.34940 2.78183 3.24816 42 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 43 3.05756 2.57537 3.10690 0.18376 43 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 44 3.05756 2.57537 3.10690 0.18376 44 - - 1.38629 1.38629 1.38629 1.38629 0.03754 3.99412 3.99412 1.46634 0.26236 1.09861 0.40547 45 2.92588 3.55634 0.12065 3.45778 45 - - 1.38629 1.38629 1.38629 1.38629 0.01895 3.97552 * 1.46634 0.26236 0.00000 * //