annotate test-data/taxa_output.txt @ 1:2acf82433aa4 draft default tip

planemo upload for repository https://github.com/Onnodg/Naturalis_NLOOR/tree/main/NLOOR_scripts/process_annotations_tool commit d771f9fbfd42bcdeda1623d954550882a0863847-dirty

Uncertain count per taxonomie level{'K': 1, 'P': 0, 'C': 0, 'O': 1, 'F': 0, 'G': 13, 'S': 13}
percentage_rooted	number_rooted	total_num	taxon_level	indentificatie
6.25	2	32	K	Bacteria
6.25	2	32	P	  Pseudomonadota
6.25	2	32	C	    Gammaproteobacteria
3.12	1	32	O	      Thiohalobacterales
3.12	1	32	F	        Thiohalobacteraceae
3.12	1	32	G	          Thiohalobacter
3.12	1	32	S	            Thiohalobacter sp. COW1
3.12	1	32	O	      Xanthomonadales
3.12	1	32	F	        Xanthomonadaceae
3.12	1	32	G	          Thermomonas
3.12	1	32	S	            Thermomonas brevis
3.12	1	32	K	Uncertain taxa
90.62	29	32	K	Viridiplantae
90.62	29	32	P	  Streptophyta
3.12	1	32	C	    Bryopsida
3.12	1	32	O	      Funariales
3.12	1	32	F	        Funariaceae
3.12	1	32	G	          Funaria
3.12	1	32	S	            Uncertain taxa
87.50	28	32	C	    Magnoliopsida
3.12	1	32	O	      Apiales
3.12	1	32	F	        Apiaceae
3.12	1	32	G	          Uncertain taxa
3.12	1	32	O	      Asterales
3.12	1	32	F	        Asteraceae
3.12	1	32	G	          Cicerbita
3.12	1	32	S	            Cicerbita alpina
3.12	1	32	O	      Caryophyllales
3.12	1	32	F	        Polygonaceae
3.12	1	32	G	          Rumex
3.12	1	32	S	            Uncertain taxa
3.12	1	32	O	      Fabales
3.12	1	32	F	        Fabaceae
3.12	1	32	G	          Trifolium
3.12	1	32	S	            Uncertain taxa
9.38	3	32	O	      Fagales
3.12	1	32	F	        Betulaceae
3.12	1	32	G	          Alnus
3.12	1	32	S	            Uncertain taxa
6.25	2	32	F	        Fagaceae
3.12	1	32	G	          Quercus
3.12	1	32	S	            Uncertain taxa
3.12	1	32	G	          Uncertain taxa
12.50	4	32	O	      Lamiales
9.38	3	32	F	        Oleaceae
9.38	3	32	G	          Uncertain taxa
3.12	1	32	F	        Plantaginaceae
3.12	1	32	G	          Plantago
3.12	1	32	S	            Plantago asiatica
15.62	5	32	O	      Malpighiales
3.12	1	32	F	        Linaceae
3.12	1	32	G	          Linum
3.12	1	32	S	            Uncertain taxa
12.50	4	32	F	        Salicaceae
6.25	2	32	G	          Populus
6.25	2	32	S	            Uncertain taxa
6.25	2	32	G	          Uncertain taxa
3.12	1	32	O	      Malvales
3.12	1	32	F	        Malvaceae
3.12	1	32	G	          Tilia
3.12	1	32	S	            Uncertain taxa
3.12	1	32	O	      Poales
3.12	1	32	F	        Poaceae
3.12	1	32	G	          Uncertain taxa
3.12	1	32	O	      Ranunculales
3.12	1	32	F	        Ranunculaceae
3.12	1	32	G	          Ranunculus
3.12	1	32	S	            Uncertain taxa
15.62	5	32	O	      Rosales
3.12	1	32	F	        Rosaceae
3.12	1	32	G	          Uncertain taxa
12.50	4	32	F	        Ulmaceae
12.50	4	32	G	          Uncertain taxa
3.12	1	32	O	      Sapindales
3.12	1	32	F	        Anacardiaceae
3.12	1	32	G	          Mangifera
3.12	1	32	S	            Uncertain taxa
3.12	1	32	O	      Saxifragales
3.12	1	32	F	        Saxifragaceae
3.12	1	32	G	          Saxifraga
3.12	1	32	S	            Uncertain taxa
3.12	1	32	O	      Uncertain taxa
3.12	1	32	O	      Vitales
3.12	1	32	F	        Vitaceae
3.12	1	32	G	          Vitis
3.12	1	32	S	            Uncertain taxa