Mercurial > repos > onnodg > blast_annotations_processor
diff test-data/output_circle_data.txt @ 3:ca2f07b71581 draft default tip
planemo upload for repository https://github.com/Onnodg/Naturalis_NLOOR/tree/main/NLOOR_scripts/process_annotations_tool commit 600e5a50a13a3a16a1970d6d4d31cb4f7bd549bf-dirty
| author | onnodg |
|---|---|
| date | Thu, 12 Feb 2026 13:52:07 +0000 |
| parents | 9ca209477dfd |
| children |
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--- a/test-data/output_circle_data.txt Mon Dec 15 16:43:36 2025 +0000 +++ b/test-data/output_circle_data.txt Thu Feb 12 13:52:07 2026 +0000 @@ -4,7 +4,7 @@ "Viridiplantae" ], "sizes": [ - 3227 + 3373 ] }, { @@ -12,7 +12,7 @@ "Streptophyta" ], "sizes": [ - 3227 + 3373 ] }, { @@ -21,7 +21,7 @@ "Pinopsida" ], "sizes": [ - 3226, + 3372, 1 ] }, @@ -33,6 +33,7 @@ "Brassicales", "Caryophyllales", "Celastrales", + "Cornales", "Dipsacales", "Ericales", "Fabales", @@ -40,6 +41,10 @@ "Gentianales", "Lamiales", "Malpighiales", + "Malvales", + "Myrtales", + "Oxalidales", + "Piperales", "Poales", "Ranunculales", "Rosales", @@ -48,24 +53,29 @@ "Cupressales" ], "sizes": [ - 62, - 146, + 66, + 161, 2, 6, - 108, + 109, 1, - 1, + 2, + 4, 7, 141, - 382, + 395, 2, - 220, - 396, - 317, - 157, - 1093, - 170, - 15, + 226, + 405, + 5, + 6, + 1, + 1, + 321, + 160, + 1161, + 172, + 18, 1 ] }, @@ -73,11 +83,11 @@ "labels": [ "Apiaceae", "Asteraceae", - "Uncertain taxa", "Boraginaceae", "Brassicaceae", "Polygonaceae", "Celastraceae", + "Cornaceae", "Adoxaceae", "Ericaceae", "Primulaceae", @@ -89,14 +99,20 @@ "Lamiaceae", "Orobanchaceae", "Plantaginaceae", - "Uncertain taxa", + "Euphorbiaceae", "Linaceae", "Salicaceae", + "Malvaceae", + "Thymelaeaceae", + "Onagraceae", + "Oxalidaceae", + "Aristolochiaceae", "Poaceae", "Ranunculaceae", "Cannabaceae", "Rosaceae", "Ulmaceae", + "Uncertain taxa", "Urticaceae", "Convolvulaceae", "Solanaceae", @@ -105,37 +121,43 @@ "Taxaceae" ], "sizes": [ - 62, - 137, - 9, + 66, + 161, 2, 6, - 108, + 109, 1, - 1, + 2, + 4, 1, 6, 141, - 301, - 74, + 311, + 77, 7, 2, - 72, + 76, + 3, + 147, 1, - 144, - 3, 10, - 386, - 317, - 157, + 394, + 1, + 4, + 6, + 1, + 1, + 321, + 160, 7, - 78, - 1007, + 88, + 1059, + 6, 1, - 9, - 128, - 33, - 15, + 12, + 156, + 4, + 18, 1 ] }, @@ -145,26 +167,34 @@ "Apium", "Uncertain taxa", "Achillea", + "Artemisia", "Calendula", "Cirsium", "Erigeron", + "Galinsoga", + "Gnaphalium", + "Inula", + "Lactuca", "Matricaria", + "Tussilago", "Uncertain taxa", - "Uncertain taxa", + "Xanthium", "Echium", "Brassica", - "Uncertain taxa", + "Capsella", + "Cardamine", "Fagopyrum", "Persicaria", "Polygonum", "Rumex", "Uncertain taxa", "Euonymus", + "Cornus", "Sambucus", - "Uncertain taxa", + "Calluna", "Lysimachia", - "Uncertain taxa", "Lathyrus", + "Pisum", "Trifolium", "Uncertain taxa", "Vicia", @@ -178,88 +208,122 @@ "Vinca", "Glechoma", "Mentha", + "Teucrium", "Uncertain taxa", + "Orobanche", "Rhinanthus", "Plantago", "Veronica", - "Uncertain taxa", + "Euphorbia", "Linum", "Populus", + "Hibiscus", + "Daphne", + "Circaea", + "Uncertain taxa", + "Oxalis", + "Aristolochia", "Festuca", "Poa", "Uncertain taxa", "Ranunculus", + "Uncertain taxa", "Humulus", "Filipendula", + "Pyrus", + "Rubus", "Uncertain taxa", "Ulmus", + "Uncertain taxa", "Urtica", "Convolvulus", "Capsicum", + "Nicandra", "Uncertain taxa", "Uncertain taxa", "Uncertain taxa", "Taxus" ], "sizes": [ - 8, + 41, + 9, + 16, 2, - 52, - 1, - 1, - 18, - 1, - 2, - 114, - 9, - 2, - 1, 5, 1, - 1, - 3, - 75, - 28, + 19, + 2, 1, 1, 1, 1, - 5, - 13, - 97, - 21, + 2, + 4, + 120, + 2, + 2, + 2, + 1, + 3, + 1, + 1, + 29, + 76, + 2, + 1, + 2, + 4, + 1, + 6, + 16, + 1, + 113, + 1, 10, - 177, - 4, - 9, - 111, - 14, - 60, + 193, + 19, + 91, + 8, + 15, + 62, 7, 2, + 9, + 9, + 1, + 57, + 2, + 1, + 134, + 13, + 1, + 10, + 394, + 1, + 4, 1, 5, - 66, + 1, 1, - 131, + 28, + 96, + 197, + 158, + 2, + 7, + 19, 13, 3, - 10, - 386, - 3, - 7, - 307, - 157, - 7, - 17, - 61, - 1007, + 53, + 1059, + 6, 1, - 9, + 12, + 1, 1, - 127, - 33, - 15, + 154, + 4, + 18, 1 ] }, @@ -270,14 +334,21 @@ "Uncertain taxa", "Achillea millefolium", "Uncertain taxa", + "Uncertain taxa", "Cirsium arvense", "Cirsium vulgare", "Uncertain taxa", - "Matricaria chamomilla", "Uncertain taxa", + "Gnaphalium uliginosum", + "Inula salicina", + "Lactuca sativa", + "Matricaria chamomilla", + "Tussilago farfara", "Uncertain taxa", + "Xanthium strumarium", "Echium vulgare", "Brassica oleracea", + "Capsella bursa-pastoris", "Uncertain taxa", "Fagopyrum esculentum", "Uncertain taxa", @@ -285,13 +356,17 @@ "Uncertain taxa", "Uncertain taxa", "Euonymus europaeus", - "Uncertain taxa", + "Cornus mas", + "Cornus sericea", "Uncertain taxa", - "Uncertain taxa", + "Calluna vulgaris", + "Lysimachia thyrsiflora", + "Lysimachia vulgaris", "Uncertain taxa", "Lathyrus pratensis", - "Uncertain taxa", + "Pisum sativum", "Trifolium arvense", + "Trifolium medium", "Trifolium repens", "Uncertain taxa", "Uncertain taxa", @@ -309,103 +384,146 @@ "Uncertain taxa", "Uncertain taxa", "Uncertain taxa", + "Uncertain taxa", + "Uncertain taxa", "Plantago lanceolata", "Plantago major", "Uncertain taxa", "Veronica chamaedrys", - "Uncertain taxa", + "Euphorbia myrsinites", "Linum usitatissimum", "Populus tremula", "Uncertain taxa", + "Hibiscus trionum", + "Daphne mezereum", + "Circaea lutetiana", + "Uncertain taxa", + "Uncertain taxa", + "Aristolochia clematitis", "Festuca rubra", "Poa compressa", + "Poa pratensis", + "Poa trivialis", "Uncertain taxa", "Uncertain taxa", "Ranunculus acris", + "Ranunculus muricatus", "Ranunculus repens", "Uncertain taxa", + "Uncertain taxa", "Humulus lupulus", "Filipendula ulmaria", + "Pyrus communis", + "Rubus idaeus", + "Uncertain taxa", "Uncertain taxa", "Uncertain taxa", "Urtica dioica", "Convolvulus arvensis", "Capsicum annuum", + "Nicandra physalodes", "Uncertain taxa", "Uncertain taxa", "Uncertain taxa", "Taxus baccata" ], "sizes": [ - 8, - 2, - 52, - 1, - 1, + 41, + 9, 16, 2, - 1, - 2, - 114, - 9, - 2, - 1, 5, 1, - 1, - 3, - 75, - 28, + 17, + 2, + 2, 1, 1, 1, 1, - 5, + 2, + 4, + 120, + 2, + 2, + 2, 1, - 12, + 3, + 1, + 1, + 29, + 76, 2, - 9, - 86, - 21, + 1, + 1, + 1, + 4, + 1, + 1, + 4, + 1, + 16, + 1, + 4, + 89, + 12, + 8, + 1, 9, 1, - 177, - 4, - 9, - 111, - 14, - 60, + 193, + 19, + 91, + 8, + 15, + 62, 7, 2, + 9, + 9, 1, - 5, - 66, + 57, + 2, 1, 22, 109, + 3, + 13, + 1, + 10, + 379, + 15, + 1, 4, - 9, - 3, - 10, - 22, - 364, + 1, + 5, + 1, + 1, + 28, 3, 1, - 6, - 307, + 1, + 91, + 197, 1, - 20, - 136, + 10, + 146, + 1, + 2, 7, - 17, - 61, - 1007, + 19, + 13, + 3, + 53, + 1059, + 6, 1, - 9, + 12, + 1, 1, - 127, - 33, - 15, + 154, + 4, + 18, 1 ] }