Mercurial > repos > onnodg > blast_annotations_processor
view test-data/output_taxa_output.txt @ 1:2acf82433aa4 draft default tip
planemo upload for repository https://github.com/Onnodg/Naturalis_NLOOR/tree/main/NLOOR_scripts/process_annotations_tool commit d771f9fbfd42bcdeda1623d954550882a0863847-dirty
| author | onnodg |
|---|---|
| date | Mon, 20 Oct 2025 12:26:51 +0000 |
| parents | a3989edf0a4a |
| children |
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Uncertain count per taxonomie level{'K': 0, 'P': 0, 'C': 0, 'O': 18, 'F': 10, 'G': 615, 'S': 1285} percentage_rooted number_rooted total_num taxon_level indentificatie 100.00 3373 3373 K Viridiplantae 100.00 3373 3373 P Streptophyta 99.97 3372 3373 C Magnoliopsida 1.96 66 3373 O Apiales 1.96 66 3373 F Apiaceae 1.22 41 3373 G Aegopodium 1.22 41 3373 S Aegopodium podagraria 0.27 9 3373 G Apium 0.27 9 3373 S Apium graveolens 0.47 16 3373 G Uncertain taxa 4.77 161 3373 O Asterales 4.77 161 3373 F Asteraceae 0.06 2 3373 G Achillea 0.06 2 3373 S Achillea millefolium 0.15 5 3373 G Artemisia 0.15 5 3373 S Uncertain taxa 0.03 1 3373 G Calendula 0.03 1 3373 S Uncertain taxa 0.56 19 3373 G Cirsium 0.50 17 3373 S Cirsium arvense 0.06 2 3373 S Cirsium vulgare 0.06 2 3373 G Erigeron 0.06 2 3373 S Uncertain taxa 0.03 1 3373 G Galinsoga 0.03 1 3373 S Uncertain taxa 0.03 1 3373 G Gnaphalium 0.03 1 3373 S Gnaphalium uliginosum 0.03 1 3373 G Inula 0.03 1 3373 S Inula salicina 0.03 1 3373 G Lactuca 0.03 1 3373 S Lactuca sativa 0.06 2 3373 G Matricaria 0.06 2 3373 S Matricaria chamomilla 0.12 4 3373 G Tussilago 0.12 4 3373 S Tussilago farfara 3.56 120 3373 G Uncertain taxa 0.06 2 3373 G Xanthium 0.06 2 3373 S Xanthium strumarium 0.06 2 3373 O Boraginales 0.06 2 3373 F Boraginaceae 0.06 2 3373 G Echium 0.06 2 3373 S Echium vulgare 0.18 6 3373 O Brassicales 0.18 6 3373 F Brassicaceae 0.06 2 3373 G Brassica 0.06 2 3373 S Brassica oleracea 0.03 1 3373 G Capsella 0.03 1 3373 S Capsella bursa-pastoris 0.09 3 3373 G Cardamine 0.09 3 3373 S Uncertain taxa 3.23 109 3373 O Caryophyllales 3.23 109 3373 F Polygonaceae 0.03 1 3373 G Fagopyrum 0.03 1 3373 S Fagopyrum esculentum 0.03 1 3373 G Persicaria 0.03 1 3373 S Uncertain taxa 0.86 29 3373 G Polygonum 0.86 29 3373 S Polygonum aviculare 2.25 76 3373 G Rumex 2.25 76 3373 S Uncertain taxa 0.06 2 3373 G Uncertain taxa 0.03 1 3373 O Celastrales 0.03 1 3373 F Celastraceae 0.03 1 3373 G Euonymus 0.03 1 3373 S Euonymus europaeus 0.06 2 3373 O Cornales 0.06 2 3373 F Cornaceae 0.06 2 3373 G Cornus 0.03 1 3373 S Cornus mas 0.03 1 3373 S Cornus sericea 0.12 4 3373 O Dipsacales 0.12 4 3373 F Adoxaceae 0.12 4 3373 G Sambucus 0.12 4 3373 S Uncertain taxa 0.21 7 3373 O Ericales 0.03 1 3373 F Ericaceae 0.03 1 3373 G Calluna 0.03 1 3373 S Calluna vulgaris 0.18 6 3373 F Primulaceae 0.18 6 3373 G Lysimachia 0.03 1 3373 S Lysimachia thyrsiflora 0.12 4 3373 S Lysimachia vulgaris 0.03 1 3373 S Uncertain taxa 4.18 141 3373 O Fabales 4.18 141 3373 F Fabaceae 0.47 16 3373 G Lathyrus 0.47 16 3373 S Lathyrus pratensis 0.03 1 3373 G Pisum 0.03 1 3373 S Pisum sativum 3.35 113 3373 G Trifolium 0.12 4 3373 S Trifolium arvense 2.64 89 3373 S Trifolium medium 0.36 12 3373 S Trifolium repens 0.24 8 3373 S Uncertain taxa 0.03 1 3373 G Uncertain taxa 0.30 10 3373 G Vicia 0.27 9 3373 S Vicia faba 0.03 1 3373 S Vicia hirsuta 11.71 395 3373 O Fagales 9.22 311 3373 F Betulaceae 5.72 193 3373 G Alnus 5.72 193 3373 S Alnus incana 0.56 19 3373 G Betula 0.56 19 3373 S Betula pendula 2.70 91 3373 G Carpinus 2.70 91 3373 S Carpinus betulus 0.24 8 3373 G Uncertain taxa 2.28 77 3373 F Fagaceae 0.44 15 3373 G Fagus 0.44 15 3373 S Fagus sylvatica 1.84 62 3373 G Quercus 1.84 62 3373 S Quercus rubra 0.21 7 3373 F Juglandaceae 0.21 7 3373 G Juglans 0.21 7 3373 S Juglans regia 0.06 2 3373 O Gentianales 0.06 2 3373 F Apocynaceae 0.06 2 3373 G Vinca 0.06 2 3373 S Vinca minor 6.70 226 3373 O Lamiales 2.25 76 3373 F Lamiaceae 0.27 9 3373 G Glechoma 0.27 9 3373 S Glechoma hederacea 0.27 9 3373 G Mentha 0.27 9 3373 S Uncertain taxa 0.03 1 3373 G Teucrium 0.03 1 3373 S Uncertain taxa 1.69 57 3373 G Uncertain taxa 0.09 3 3373 F Orobanchaceae 0.06 2 3373 G Orobanche 0.06 2 3373 S Uncertain taxa 0.03 1 3373 G Rhinanthus 0.03 1 3373 S Uncertain taxa 4.36 147 3373 F Plantaginaceae 3.97 134 3373 G Plantago 0.65 22 3373 S Plantago lanceolata 3.23 109 3373 S Plantago major 0.09 3 3373 S Uncertain taxa 0.39 13 3373 G Veronica 0.39 13 3373 S Veronica chamaedrys 12.01 405 3373 O Malpighiales 0.03 1 3373 F Euphorbiaceae 0.03 1 3373 G Euphorbia 0.03 1 3373 S Euphorbia myrsinites 0.30 10 3373 F Linaceae 0.30 10 3373 G Linum 0.30 10 3373 S Linum usitatissimum 11.68 394 3373 F Salicaceae 11.68 394 3373 G Populus 11.24 379 3373 S Populus tremula 0.44 15 3373 S Uncertain taxa 0.15 5 3373 O Malvales 0.03 1 3373 F Malvaceae 0.03 1 3373 G Hibiscus 0.03 1 3373 S Hibiscus trionum 0.12 4 3373 F Thymelaeaceae 0.12 4 3373 G Daphne 0.12 4 3373 S Daphne mezereum 0.18 6 3373 O Myrtales 0.18 6 3373 F Onagraceae 0.03 1 3373 G Circaea 0.03 1 3373 S Circaea lutetiana 0.15 5 3373 G Uncertain taxa 0.03 1 3373 O Oxalidales 0.03 1 3373 F Oxalidaceae 0.03 1 3373 G Oxalis 0.03 1 3373 S Uncertain taxa 0.03 1 3373 O Piperales 0.03 1 3373 F Aristolochiaceae 0.03 1 3373 G Aristolochia 0.03 1 3373 S Aristolochia clematitis 9.52 321 3373 O Poales 9.52 321 3373 F Poaceae 0.83 28 3373 G Festuca 0.83 28 3373 S Festuca rubra 2.85 96 3373 G Poa 0.09 3 3373 S Poa compressa 0.03 1 3373 S Poa pratensis 0.03 1 3373 S Poa trivialis 2.70 91 3373 S Uncertain taxa 5.84 197 3373 G Uncertain taxa 4.74 160 3373 O Ranunculales 4.74 160 3373 F Ranunculaceae 4.68 158 3373 G Ranunculus 0.03 1 3373 S Ranunculus acris 0.30 10 3373 S Ranunculus muricatus 4.33 146 3373 S Ranunculus repens 0.03 1 3373 S Uncertain taxa 0.06 2 3373 G Uncertain taxa 34.42 1161 3373 O Rosales 0.21 7 3373 F Cannabaceae 0.21 7 3373 G Humulus 0.21 7 3373 S Humulus lupulus 2.61 88 3373 F Rosaceae 0.56 19 3373 G Filipendula 0.56 19 3373 S Filipendula ulmaria 0.39 13 3373 G Pyrus 0.39 13 3373 S Pyrus communis 0.09 3 3373 G Rubus 0.09 3 3373 S Rubus idaeus 1.57 53 3373 G Uncertain taxa 31.40 1059 3373 F Ulmaceae 31.40 1059 3373 G Ulmus 31.40 1059 3373 S Uncertain taxa 0.18 6 3373 F Uncertain taxa 0.03 1 3373 F Urticaceae 0.03 1 3373 G Urtica 0.03 1 3373 S Urtica dioica 5.10 172 3373 O Solanales 0.36 12 3373 F Convolvulaceae 0.36 12 3373 G Convolvulus 0.36 12 3373 S Convolvulus arvensis 4.62 156 3373 F Solanaceae 0.03 1 3373 G Capsicum 0.03 1 3373 S Capsicum annuum 0.03 1 3373 G Nicandra 0.03 1 3373 S Nicandra physalodes 4.57 154 3373 G Uncertain taxa 0.12 4 3373 F Uncertain taxa 0.53 18 3373 O Uncertain taxa 0.03 1 3373 C Pinopsida 0.03 1 3373 O Cupressales 0.03 1 3373 F Taxaceae 0.03 1 3373 G Taxus 0.03 1 3373 S Taxus baccata