=== CD-HIT cluster processing started ===
cluster_file: provided
annotation_file: provided
=== PARAMETERS ===
simi_plot_y_min: 90.0
simi_plot_y_max: 100.0
uncertain_taxa_use_ratio: 0.3
min_to_split: 0.4
min_count_to_split: 5
show_unannotated_clusters: False
make_taxa_in_cluster_split: True
print_empty_files: True
=== PARAMETERS END===
Loaded 622 annotated headers
Parsed 514 clusters
Similarity text summary written succesfully
Similarity mean = 99.70, std = 0.63
Similarity plot written succesfully
Count summary written succesfully
TOTAL annotated=49571, unannotated=17069, total=66640
Raw taxa per cluster written succesfully
Processed taxa (split clusters) written succesfully
=== SUMMARY ===
Clusters parsed: 514
Total reads: 66640
Annotated reads: 49571
Unannotated reads: 17069
Clusters with annotations: 29
Clusters fully unannotated: 485
=== TAXA SUMMARY (top 10) ===
Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Cannabaceae / Humulus / Humulus lupulus: 47123 reads
Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Rosaceae / Uncertain taxa / Uncertain taxa: 383 reads
Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Betulaceae / Alnus / Alnus incana: 300 reads
Viridiplantae / Streptophyta / Magnoliopsida / Poales / Poaceae / Uncertain taxa / Uncertain taxa: 288 reads
Viridiplantae / Streptophyta / Magnoliopsida / Malpighiales / Salicaceae / Populus / Uncertain taxa: 224 reads
Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Fagaceae / Quercus / Quercus rubra: 202 reads
Viridiplantae / Streptophyta / Magnoliopsida / Solanales / Uncertain taxa / Uncertain taxa / Uncertain taxa: 180 reads
Viridiplantae / Streptophyta / Magnoliopsida / Gentianales / Rubiaceae / Uncertain taxa / Uncertain taxa: 156 reads
Viridiplantae / Streptophyta / Magnoliopsida / Uncertain taxa / Uncertain taxa / Uncertain taxa / Uncertain taxa: 146 reads
Viridiplantae / Streptophyta / Magnoliopsida / Caryophyllales / Polygonaceae / Uncertain taxa / Uncertain taxa: 134 reads
Total unique taxa: 22
=== SIMILARITY SUMMARY ===
Mean similarity: 99.70
Std similarity: 0.63
=== CD-HIT cluster processing finished ===