diff test-data/taxa_out.clstr @ 0:00d56396b32a draft

planemo upload for repository https://github.com/Onnodg/Naturalis_NLOOR/tree/main/NLOOR_scripts/process_clusters_tool commit c944fd5685f295acba06679e85b67973c173b137
author onnodg
date Tue, 14 Oct 2025 09:09:46 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/taxa_out.clstr	Tue Oct 14 09:09:46 2025 +0000
@@ -0,0 +1,534 @@
+cluster	count	taxa
+0	10993	Unannotated read
+1	3950	Unannotated read
+2	5681	Unannotated read
+3	2059	Unannotated read
+4	1566	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Rosaceae / Uncertain taxa / Uncertain taxa
+4	1	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Rosaceae / Pyrus / Pyrus communis
+5	160	Unannotated read
+6	874	Unannotated read
+7	706	Unannotated read
+8	401	Unannotated read
+9	1109	Unannotated read
+10	75	Unannotated read
+10	385	Viridiplantae / Streptophyta / Magnoliopsida / Malvales / Malvaceae / Hibiscus / Hibiscus trionum
+11	479	Unannotated read
+12	471	Unannotated read
+13	502	Unannotated read
+14	455	Unannotated read
+15	351	Unannotated read
+16	604	Unannotated read
+17	302	Unannotated read
+18	64	Unannotated read
+19	419	Unannotated read
+20	302	Unannotated read
+21	116	Unannotated read
+22	65	Unannotated read
+22	239	Viridiplantae / Streptophyta / Magnoliopsida / Malvales / Malvaceae / Hibiscus / Hibiscus trionum
+23	347	Unannotated read
+24	1	Unannotated read
+24	175	Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Juglandaceae / Juglans / Juglans regia
+24	1	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Ulmaceae / Ulmus / Uncertain taxa
+25	169	Unannotated read
+26	389	Unannotated read
+27	228	Unannotated read
+28	248	Unannotated read
+29	101	Unannotated read
+30	237	Unannotated read
+31	73	Unannotated read
+32	293	Unannotated read
+33	30	Unannotated read
+34	181	Unannotated read
+35	152	Unannotated read
+36	14	Unannotated read
+36	88	Viridiplantae / Streptophyta / Magnoliopsida / Malvales / Malvaceae / Hibiscus / Hibiscus trionum
+37	152	Unannotated read
+38	194	Unannotated read
+39	112	Unannotated read
+40	30	Unannotated read
+41	162	Unannotated read
+42	4	Unannotated read
+42	82	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Rosaceae / Uncertain taxa / Uncertain taxa
+42	1	Viridiplantae / Streptophyta / Magnoliopsida / Uncertain taxa / Uncertain taxa / Uncertain taxa / Uncertain taxa
+43	140	Viridiplantae / Streptophyta / Magnoliopsida / Asparagales / Amaryllidaceae / Allium / Uncertain taxa
+44	66	Unannotated read
+45	161	Unannotated read
+46	24	Unannotated read
+47	271	Unannotated read
+48	137	Unannotated read
+49	101	Unannotated read
+50	1	Unannotated read
+50	38	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Rosaceae / Uncertain taxa / Uncertain taxa
+51	55	Unannotated read
+52	150	Unannotated read
+53	42	Unannotated read
+54	21	Unannotated read
+55	20	Unannotated read
+56	75	Unannotated read
+57	89	Unannotated read
+58	52	Unannotated read
+59	19	Unannotated read
+60	145	Unannotated read
+61	63	Unannotated read
+62	127	Unannotated read
+63	107	Unannotated read
+64	73	Unannotated read
+65	34	Unannotated read
+66	48	Unannotated read
+67	16	Unannotated read
+68	163	Unannotated read
+69	23	Unannotated read
+70	147	Unannotated read
+71	22	Unannotated read
+72	91	Unannotated read
+73	13	Unannotated read
+74	11	Unannotated read
+75	57	Unannotated read
+76	19	Unannotated read
+77	69	Unannotated read
+78	45	Unannotated read
+79	44	Unannotated read
+80	27	Unannotated read
+81	18	Unannotated read
+81	24	Viridiplantae / Streptophyta / Magnoliopsida / Rosales / Uncertain taxa / Uncertain taxa / Uncertain taxa
+82	71	Unannotated read
+83	71	Unannotated read
+84	13	Unannotated read
+85	15	Unannotated read
+86	23	Unannotated read
+87	56	Unannotated read
+88	10	Unannotated read
+89	13	Unannotated read
+90	121	Unannotated read
+91	17	Unannotated read
+92	28	Unannotated read
+93	55	Unannotated read
+94	22	Unannotated read
+95	10	Unannotated read
+96	16	Unannotated read
+97	77	Unannotated read
+98	12	Unannotated read
+99	13	Unannotated read
+100	26	Unannotated read
+101	16	Unannotated read
+102	21	Unannotated read
+103	10	Unannotated read
+104	8	Unannotated read
+105	102	Unannotated read
+106	9	Unannotated read
+107	25	Unannotated read
+108	11	Unannotated read
+109	73	Unannotated read
+110	34	Unannotated read
+111	10	Unannotated read
+112	9	Unannotated read
+113	15	Unannotated read
+114	17	Unannotated read
+115	8	Unannotated read
+116	8	Unannotated read
+117	37	Unannotated read
+118	34	Unannotated read
+119	49	Unannotated read
+120	25	Unannotated read
+121	26	Unannotated read
+122	9	Unannotated read
+123	7	Unannotated read
+124	7	Unannotated read
+125	16	Unannotated read
+125	2	Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Juglandaceae / Juglans / Juglans regia
+126	10	Unannotated read
+127	8	Unannotated read
+128	8	Unannotated read
+129	34	Unannotated read
+130	12	Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Juglandaceae / Juglans / Juglans regia
+131	6	Unannotated read
+132	7	Unannotated read
+133	7	Unannotated read
+134	85	Unannotated read
+135	22	Unannotated read
+136	8	Unannotated read
+137	13	Unannotated read
+138	9	Unannotated read
+139	1	Unannotated read
+139	7	Viridiplantae / Streptophyta / Magnoliopsida / Asparagales / Hyacinthaceae / Scilla / Scilla siberica
+140	24	Unannotated read
+141	29	Unannotated read
+142	6	Unannotated read
+143	51	Unannotated read
+144	83	Unannotated read
+145	7	Unannotated read
+146	6	Unannotated read
+147	7	Unannotated read
+148	6	Unannotated read
+149	12	Unannotated read
+150	10	Unannotated read
+151	24	Unannotated read
+152	1	Unannotated read
+152	3	Viridiplantae / Streptophyta / Magnoliopsida / Asparagales / Hyacinthaceae / Scilla / Scilla siberica
+152	1	Viridiplantae / Streptophyta / Magnoliopsida / Asparagales / Amaryllidaceae / Allium / Uncertain taxa
+153	6	Unannotated read
+154	7	Unannotated read
+155	8	Unannotated read
+156	5	Unannotated read
+157	47	Unannotated read
+158	41	Unannotated read
+159	14	Unannotated read
+160	44	Unannotated read
+161	7	Unannotated read
+162	70	Unannotated read
+163	22	Unannotated read
+164	37	Unannotated read
+165	13	Unannotated read
+166	6	Unannotated read
+167	25	Unannotated read
+168	6	Unannotated read
+169	8	Unannotated read
+170	8	Unannotated read
+171	32	Unannotated read
+172	18	Unannotated read
+173	8	Unannotated read
+174	7	Unannotated read
+175	15	Unannotated read
+176	5	Unannotated read
+177	14	Unannotated read
+178	27	Unannotated read
+179	34	Unannotated read
+180	4	Unannotated read
+181	4	Unannotated read
+182	4	Unannotated read
+183	4	Unannotated read
+184	6	Unannotated read
+185	4	Unannotated read
+186	4	Unannotated read
+187	60	Unannotated read
+188	6	Unannotated read
+189	16	Unannotated read
+190	4	Unannotated read
+191	32	Unannotated read
+192	4	Unannotated read
+193	4	Unannotated read
+194	30	Unannotated read
+195	13	Unannotated read
+196	4	Unannotated read
+197	19	Unannotated read
+198	14	Unannotated read
+199	34	Unannotated read
+200	14	Unannotated read
+201	4	Unannotated read
+202	4	Unannotated read
+203	51	Unannotated read
+204	4	Unannotated read
+205	4	Unannotated read
+206	8	Unannotated read
+207	5	Unannotated read
+208	16	Unannotated read
+209	26	Unannotated read
+210	5	Unannotated read
+211	4	Unannotated read
+212	24	Unannotated read
+213	18	Unannotated read
+214	97	Unannotated read
+215	12	Unannotated read
+216	4	Unannotated read
+217	37	Unannotated read
+218	16	Unannotated read
+219	51	Unannotated read
+220	3	Unannotated read
+221	15	Unannotated read
+222	3	Unannotated read
+223	5	Unannotated read
+224	6	Unannotated read
+225	7	Unannotated read
+226	11	Unannotated read
+227	3	Unannotated read
+228	3	Unannotated read
+229	3	Unannotated read
+230	27	Unannotated read
+231	3	Unannotated read
+232	3	Unannotated read
+233	14	Unannotated read
+234	23	Unannotated read
+235	3	Unannotated read
+236	30	Unannotated read
+237	16	Unannotated read
+238	3	Unannotated read
+239	3	Unannotated read
+240	3	Unannotated read
+241	3	Unannotated read
+242	18	Unannotated read
+243	11	Unannotated read
+244	3	Unannotated read
+245	13	Unannotated read
+246	10	Unannotated read
+247	5	Unannotated read
+248	4	Unannotated read
+249	3	Unannotated read
+250	20	Unannotated read
+251	11	Unannotated read
+252	19	Unannotated read
+253	3	Unannotated read
+254	6	Unannotated read
+255	36	Unannotated read
+256	6	Unannotated read
+257	3	Unannotated read
+258	2	Unannotated read
+259	8	Unannotated read
+260	2	Unannotated read
+261	6	Unannotated read
+262	2	Unannotated read
+263	7	Unannotated read
+264	2	Unannotated read
+265	2	Unannotated read
+266	2	Unannotated read
+267	2	Unannotated read
+268	2	Unannotated read
+269	23	Unannotated read
+270	2	Unannotated read
+271	5	Unannotated read
+272	2	Unannotated read
+273	9	Unannotated read
+274	2	Unannotated read
+275	2	Unannotated read
+276	2	Unannotated read
+277	2	Unannotated read
+278	2	Unannotated read
+279	2	Unannotated read
+280	2	Unannotated read
+281	2	Unannotated read
+282	2	Unannotated read
+283	5	Unannotated read
+284	7	Unannotated read
+285	2	Unannotated read
+286	3	Unannotated read
+287	24	Unannotated read
+288	2	Unannotated read
+289	5	Unannotated read
+290	8	Unannotated read
+291	2	Unannotated read
+292	4	Unannotated read
+293	2	Unannotated read
+294	2	Unannotated read
+295	14	Unannotated read
+296	3	Unannotated read
+297	2	Unannotated read
+298	2	Unannotated read
+299	2	Unannotated read
+300	2	Unannotated read
+301	2	Unannotated read
+302	3	Unannotated read
+303	2	Unannotated read
+304	2	Unannotated read
+305	5	Unannotated read
+306	11	Unannotated read
+307	2	Unannotated read
+308	10	Unannotated read
+309	3	Unannotated read
+310	8	Unannotated read
+311	4	Unannotated read
+312	2	Unannotated read
+313	3	Unannotated read
+314	9	Unannotated read
+315	2	Unannotated read
+316	2	Unannotated read
+317	2	Unannotated read
+318	7	Unannotated read
+319	6	Unannotated read
+320	12	Unannotated read
+321	2	Unannotated read
+322	10	Unannotated read
+323	3	Unannotated read
+324	2	Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Juglandaceae / Juglans / Juglans regia
+325	2	Unannotated read
+326	9	Unannotated read
+327	3	Unannotated read
+328	2	Unannotated read
+329	3	Unannotated read
+330	6	Unannotated read
+331	3	Unannotated read
+332	5	Unannotated read
+333	4	Unannotated read
+334	2	Unannotated read
+335	4	Unannotated read
+336	4	Unannotated read
+337	1	Unannotated read
+338	1	Unannotated read
+339	1	Unannotated read
+340	1	Unannotated read
+341	1	Unannotated read
+342	1	Unannotated read
+343	1	Unannotated read
+344	1	Unannotated read
+345	1	Unannotated read
+346	1	Unannotated read
+347	1	Unannotated read
+348	1	Unannotated read
+349	1	Unannotated read
+350	1	Unannotated read
+351	1	Unannotated read
+352	1	Unannotated read
+353	1	Unannotated read
+354	1	Unannotated read
+355	1	Unannotated read
+356	1	Unannotated read
+357	2	Unannotated read
+358	1	Unannotated read
+359	1	Unannotated read
+360	1	Unannotated read
+361	1	Unannotated read
+362	1	Unannotated read
+363	1	Unannotated read
+364	1	Unannotated read
+365	1	Unannotated read
+366	1	Unannotated read
+367	1	Unannotated read
+368	1	Unannotated read
+369	1	Unannotated read
+370	1	Unannotated read
+371	1	Unannotated read
+372	1	Unannotated read
+373	1	Unannotated read
+374	1	Unannotated read
+375	1	Unannotated read
+376	1	Unannotated read
+377	1	Unannotated read
+378	1	Unannotated read
+379	1	Unannotated read
+380	1	Unannotated read
+381	1	Unannotated read
+382	1	Unannotated read
+383	1	Unannotated read
+384	1	Unannotated read
+385	1	Unannotated read
+386	6	Unannotated read
+387	3	Unannotated read
+388	1	Unannotated read
+389	4	Unannotated read
+390	1	Unannotated read
+391	2	Unannotated read
+392	1	Unannotated read
+393	4	Unannotated read
+394	2	Unannotated read
+395	1	Viridiplantae / Streptophyta / Magnoliopsida / Solanales / Solanaceae / Uncertain taxa / Uncertain taxa
+396	1	Unannotated read
+397	1	Unannotated read
+398	1	Unannotated read
+399	2	Unannotated read
+400	1	Unannotated read
+401	1	Unannotated read
+402	2	Unannotated read
+403	2	Unannotated read
+404	1	Unannotated read
+405	9	Unannotated read
+406	1	Unannotated read
+407	1	Unannotated read
+408	1	Unannotated read
+409	3	Unannotated read
+410	2	Unannotated read
+411	1	Unannotated read
+412	1	Unannotated read
+413	4	Unannotated read
+414	1	Unannotated read
+415	1	Unannotated read
+416	2	Unannotated read
+417	1	Unannotated read
+418	3	Unannotated read
+419	1	Unannotated read
+420	1	Unannotated read
+421	1	Unannotated read
+422	1	Unannotated read
+423	1	Unannotated read
+424	6	Unannotated read
+425	1	Unannotated read
+426	1	Unannotated read
+427	1	Unannotated read
+428	1	Unannotated read
+429	1	Unannotated read
+430	6	Unannotated read
+431	1	Unannotated read
+432	1	Unannotated read
+433	1	Unannotated read
+434	1	Unannotated read
+435	3	Unannotated read
+436	1	Unannotated read
+437	1	Unannotated read
+438	1	Unannotated read
+439	1	Unannotated read
+440	1	Unannotated read
+441	1	Unannotated read
+442	1	Unannotated read
+443	1	Viridiplantae / Streptophyta / Magnoliopsida / Ranunculales / Ranunculaceae / Ranunculus / Ranunculus repens
+444	3	Unannotated read
+445	2	Unannotated read
+446	1	Unannotated read
+447	1	Unannotated read
+448	2	Unannotated read
+449	1	Unannotated read
+450	1	Viridiplantae / Streptophyta / Magnoliopsida / Fagales / Betulaceae / Alnus / Alnus incana
+451	1	Unannotated read
+452	1	Unannotated read
+453	1	Unannotated read
+454	1	Unannotated read
+455	1	Unannotated read
+456	2	Unannotated read
+457	1	Unannotated read
+458	1	Unannotated read
+459	1	Unannotated read
+460	1	Unannotated read
+461	1	Unannotated read
+462	2	Unannotated read
+463	4	Unannotated read
+464	5	Unannotated read
+465	1	Unannotated read
+466	1	Unannotated read
+467	1	Unannotated read
+468	1	Unannotated read
+469	1	Unannotated read
+470	1	Unannotated read
+471	1	Unannotated read
+472	1	Unannotated read
+473	1	Unannotated read
+474	1	Unannotated read
+475	1	Unannotated read
+476	1	Unannotated read
+477	1	Unannotated read
+478	1	Unannotated read
+479	1	Unannotated read
+480	1	Unannotated read
+481	1	Unannotated read
+482	1	Unannotated read
+483	1	Unannotated read
+484	1	Unannotated read
+485	1	Unannotated read
+486	2	Unannotated read
+487	3	Unannotated read
+488	1	Unannotated read
+489	2	Unannotated read
+490	5	Unannotated read
+491	1	Unannotated read
+492	1	Unannotated read
+493	5	Unannotated read
+494	2	Unannotated read
+495	1	Unannotated read
+496	1	Unannotated read
+497	1	Unannotated read
+498	1	Unannotated read
+499	1	Unannotated read
+500	1	Unannotated read
+501	1	Unannotated read
+502	1	Unannotated read
+503	1	Unannotated read
+504	1	Unannotated read
+505	1	Unannotated read
+506	1	Unannotated read
+507	1	Unannotated read
+508	1	Unannotated read
+509	1	Unannotated read
+510	3	Unannotated read
+511	1	Unannotated read
+512	1	Unannotated read
+513	5	Unannotated read
+514	3	Unannotated read
+515	2	Unannotated read
+516	1	Unannotated read
+517	4	Unannotated read
+518	2	Unannotated read