Mercurial > repos > p.lucas > diamond_using_binary

changeset 27:c3903bd53198 draft

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Uploaded
author p.lucas
date Tue, 28 May 2024 14:29:46 +0000
parents ad977c2a1a1a
children 395f04a32fc3
files tool-data/tool-data/PL_diamond_database.loc
diffstat 1 files changed, 12 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/tool-data/PL_diamond_database.loc	Tue May 28 14:29:46 2024 +0000
@@ -0,0 +1,12 @@
+#This is a sample file that enables the diamind to find the protein databases
+#You will need to create these data files and then create 
+#a diamond_database.loc file similar to this one (store it in this directory) 
+#that points to the directories in which those files are stored. 
+#The diamond_database_indices.loc file has this format (longer white space characters are TAB characters):
+#
+#<unique_build_id>   <display_name>   <file_base_path>
+#
+#So, for example:
+#ncbi_nr	NCBI NR database (1-1-2015)	/data/db/diamond/1-1-2015/nr.dmnd
+
+nr_nfs	NR_NFS	/nfs/data/db/nr_blast/nr