Mercurial > repos > pablocarb > synbiodesign

comparison optbiodes2.xml @ 26:fbf2e5072b32 draft

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planemo upload commit c74b3ff2329f69ac7b309cc7d9bdf7b9d78106fb-dirty
author pablocarb
date Fri, 05 Jul 2019 17:29:50 -0400
parents 2f8af738e139
children
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25:2f8af738e139 26:fbf2e5072b32
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 python $__tool_directory__/toolOptBioDes.py $input1 -partsfile $input2 -genesfile $input3 $output1 $output2 -sbolOut $output3 -server $server 7 python $__tool_directory__/toolOptBioDes.py $input1 -partsfile $input2 -genesfile $input3 $output1 $output2 -sbolOut $output3 -server $server
8 ]]></command> 8 ]]></command>
9 <inputs> 9 <inputs>
10 <param type="integer" name="input1" value="48" label="Library size" help="Library size" /> 10 <param type="integer" name="input1" value="48" label="Library size" help="Library size" />
11 <param type="data" name="input2" format="csv" /> 11 <param type="data" name="input2" label="Regulatory parts list" format="csv" />
12 <param type="data" name="input3" format="csv" /> 12 <param type="data" name="input3" label="Genes list" format="csv" />
13 <param name="server" type="text" label="OptBioDes RES server" value="http://optbiodes.synbiochem.co.uk/REST" help="OptBioDes REST server" /> 13 <param name="server" type="text" label="OptBioDes RES server" value="http://optbiodes.synbiochem.co.uk/REST" help="OptBioDes REST server" />
14 </inputs> 14 </inputs>
15 <outputs> 15 <outputs>
16 <data name="output1" format="csv" from_work_dir="out1.csv" /> 16 <data name="output1" format="csv" from_work_dir="out1.csv" />
17 <data name="output2" format="csv" from_work_dir="out2.csv" /> 17 <data name="output2" format="csv" from_work_dir="out2.csv" />