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directory /test-data/ @ 1:1ac6ee298657 draft default tip

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file 12_YPR189W_Anc_7.546_codon_aln.fasta.clipkit 44160 -rw-r--r--
file 12_YPR190C_Anc_7.547_codon_aln.fasta.clipkit 21060 -rw-r--r--
file 12_YPR191W_Anc_7.548_codon_aln.fasta.clipkit 11724 -rw-r--r--
file 12_YPR191W_Anc_7.548_codon_aln.fasta.clipkit.treefile 354 -rw-r--r--
file Steenwyk_etal_mBio_2019_EOG091N44MS.aln.fa 59208 -rw-r--r--
file alignment_list_for_create_concat_matrix.txt 134 -rw-r--r--
file out.fa 75540 -rw-r--r--
file out.occupancy 357 -rw-r--r--
file out.partition 178 -rw-r--r--
file output 4 -rw-r--r--
file simple.fa 51 -rw-r--r--
file test_alignment_0.fa 52 -rw-r--r--
file test_aln_pk_pi.txt 152 -rw-r--r--
file test_aln_pk_pi_verbose.txt 138 -rw-r--r--
file test_aln_pk_pis.txt 12 -rw-r--r--
file test_evo_rate.txt 7 -rw-r--r--
file test_tree_simple_pd.txt 160 -rw-r--r--
file test_tree_simple_pd_verbose.txt 559 -rw-r--r--
file test_tree_simple_rfd.txt 6 -rw-r--r--
file test_treeness_over_rcv.txt 16 -rw-r--r--
file tree_simple.outgroup.txt 14 -rw-r--r--
file tree_simple.pruned 143 -rw-r--r--
file tree_simple.tre 176 -rw-r--r--
file tree_simple.tre.pruned 143 -rw-r--r--
file tree_simple.tre.rooted 183 -rw-r--r--
file tree_simple_keep.pruned 41 -rw-r--r--
file tree_simple_other_topology.tre 177 -rw-r--r--
file tree_simple_prune.txt 13 -rw-r--r--
file tree_simple_prune_keep.txt 27 -rw-r--r--