Mercurial > repos > padge > trimal
view trimal_repo/dataset/example.072.AA.strNOG.ENOG411BF1S.fasta @ 0:b15a3147e604 draft
"planemo upload for repository https://github.com/inab/trimal commit cbe1e8577ecb1a46709034a40dff36052e876e7a-dirty"
| author | padge |
|---|---|
| date | Fri, 25 Mar 2022 17:10:43 +0000 |
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>88036.EFJ04935 MDGV-------------------------------TGGDVELMSKSLQVE HKLFYFDLKENPRGRYLKISEKTTTSRSTIIVPESGIVWFLDLFNLYSN- -GD-DKFESKELQMDTK---------------------------VFYFDV GENPRGRFLKISEVSAASVRSTIIVPSGNDADEGWVQFRHVLAEIH-EAS QMLLSS------IE-NRQVSSQVLLKFQKSSPINAGFYDGPVRN----GP TVA------PPSNDTSRMSSTARVLRAEQKKFFFDLGSNARGQYLRISEV IGGDRSAIILPASALEQFHETVGEFVELLKAQEQQ-VSSAVLAD--PGYT K--- >88036.EFJ20042 MDGV-------------------------------TGGDVELMSKSLQVE HKLFYFDLKENPRGRYLKISEKTTTSRSTIIVPESGIVWFLDLFNLYSN- -GD-DKFESKELQMDTK---------------------------VFYFDV GENPRGRFLKISEVSAASVRSTIIVPSGNDADEGWVQFRHVLAEIH-EAS QMLLSS------IE-NRQVSSQVLLKFQKSSPINAGFYDGPVRN----GP TVA------PPSSDTSRMSSTARVLRAEQKKFFFDLGSNARGQYLRISEV IGGDRSAIILPASALEQFHETVGEFVELLKAQEQQ-VSSAVLAD--PGYT K--- >3218.PP1S26_202V6.1 MENA-------------------------------PGGDAELVCKTLQVE HKLFYFDLKENPRGRYLKISEKTSGSRSTIIVPVAGIVWFVDLFNYYAN- -GE-EELSSKELQLDTK---------------------------VFYFDV GENQRGRFLKVSEASVTRNRSTIIVPAGNAADEGWAAFRNILVEIH-EAS QLLLPPTASSGPLQPVQQGTSSQEHMGVMSDNVGSGYLPSTSSPI-ASAS TVPLPEVGSSNVGLAGGGLATARVIRAEQKKFFFDLGSNARGQYLRISEV TGVDRSAIILPVAALAQFHETLGQFVEVVKSQGPIGPNVANGQRYAETET II-- >3218.PP1S36_94V6.1 MEGA-------------------------------PGGDAELVCKTLQVE HKLFYFDLKENPRGRYLKISEKTSGSRSTIIVPVAGIVWFVDLFNYYAN- -GE-EELSSKELQLDTK---------------------------VFYFDV GENQRGRFLKVSEASVTRNRSTIIVPAGNAADEGWSSFRNILVEIH-EAS QLLLPPSASSG---PLQQGGILQEHMGVMADNVGAGYLPSTSSPP-ASAS TVPLPEVGSPNVASSGGGLATARVIRAEQKKFFFDLGSNARGQYLRISEV TGVDRSAIILPVAALEQFHETLGQFVEMVKSQGPIGPNVVNVRTIAPPRK RAES >4081.Solyc01g049680.2.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- --------MQVSEASVSRNRSTIIVPAGSARDEGWAAFRNILAEIN-EAS RLFISP---------NQQSLETSERL-GLSDDVGAGFISSHSSQS-APTA DLTIERTIDLPAADEVSDVGVSKVIRVDQKRFFFDLGNNNRGHFLRISEV AGSDRSSIILPLSGLKQFYDMVGHFVEISKDRLEG-ITGANVRT--IDSP QR-- >3694.POPTR_0003s20690.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---MLP---------NQQSSETSERLVGLSDDVGAGFISGHSSQS-VTTS ELNVDRSVELPPQDEIGNMAVSKVIRVDQKRFFFDLGSNNRGHFLRISEV AGNDRSSIILPLSGLKQFHEIVGHFVEITKDRIEG-MTGANVRT--VDPP QR-- >3694.POPTR_0001s03780.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ---MLP---------NQQSSETSEQLVGLSDDVGAGFISGHSSQSPAPTS ELNVDRSVDLPPQDEIGNLGVSKVIRVDQKRFFFDLGSNNRGHFLRISEV AGNDRSSIILPLSGLKQFHEIVGHFVEITKDRIEG-MTGANIRT--IDPP RR-- >4577.GRMZM2G049429_P01 MDGGGGG-GGG-GGGVGAGVMVGGGVVPGG-----GGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPIDGVAWFLDLFDYYIR- -TDERDVFSKELRLQTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHMEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGVDRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >15368.BRADI2G09470.1 MDGGGGVGGGM-AGPVGGGMVGPVGVGVGG--GGGGGSDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAWFLDLFDYYIR- -TDERDVFSKELRLDTK---------------------------VFYFDI GENKRGRYLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEISDEAS RLYVLP---NH---PSQQHLEPPERLPGLSDDVGAGFIAGHASQS-ASGP EVDVERLVDVPPIEEFSGMGLSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VEPS QR-- >4513.MLOC_51913.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ------------------MGLSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VEPS QR-- >4555.Si002339m MDGGGG-GGGG-GGVVGGGVMVGGGVGPGGG-GVGGGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVDGVAWFLDLFDYYIR- -TDERDAFSKELRLQTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MSSANVRT--VEPS QR-- >4577.GRMZM2G069208_P01 MDGGGGG-VGG--GGVGAGVMVGGGVGPGGGVG--GGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVDGVAWFLDLFDYYIR- -TDERDAFSKELRLQTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRSVLLEINNEAT RLYVLP---NH---PNQQHMEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VEPS QR-- >4558.Sb03g010090.1 MDGGGGGGGGG-GGGVGAGVMVGGGVGPGGGVGVGGGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVDGVAWFLDLFDYYIR- -TDERDAFSKELRLQTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHMEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVDRLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGPDRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VEPS QR-- >4533.OB01G20250.1 MDGGGGX-XXX-X-XXXXGVGVGGG----------GGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVAGVAWFLDLFDYYIR- -TDERDAFSKELRLDTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >4538.ORGLA01G0091300.1 MDGGGGG-GGG-G-GVMAGPGVAGGGGGGG--GGGVGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVAGVAWFLDLFDYYIR- -TDERDAFSKELRLDTKV--------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >4538.ORGLA07G0228600.1 MDGGGGG-GGG-G-GVMAGPGVAGGGGGGG--GGGVGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVAGVAWFLDLFDYYIR- -TDERDAFSKELRLDTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >39946.BGIOSGA003191-PA MDGGGGG-GGG-G-GVMAGPGVAGGGGGGG--GGGVGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVAGVAWFLDLFDYYIR- -TDERDAFSKELRLDTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >39947.LOC_Os01g15600.1 MDGGGGG-GGG-G-GVMAGPGVAGGGGGGG--GGGVGGDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSSTRSTIIVPVAGVAWFLDLFDYYIR- -TDERDAFSKELRLDTK---------------------------VFYFDI GENKRGRFLKVSEASVNRNRSTIIVPAGSSGEEGWEAFRNVLLEINNEAS RLYVLP---NH---PNQQHLEPPERLPGLSDDVGAGFIAGHGSQS-ASGP EVDVERLVDLPPQEEISGMGMSKVIRADQKRFFFDLGSNNRGHYLRISEV AGADRSSIILPLSGLKQFHEMVGHFVDIMKDRLEG-MTGANVRT--VESS QR-- >4641.GSMUA_Achr3P18030_001 MEGGATG-----------------------------GTDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVDGIVWFLELFGYYIS- -TDEQDVFSKELKLDSK---------------------------AFYFDV GENKRGRFLKISEASVNRNRSTIIVPAGISGEEGWVAFRNVLQEIHEEAS RLFMVP---------NQQHLEAPEHLPGLSDDVGAGFISGHSAQS-SSGS ELNADRLVDVHTHNEIGGMGMSKLIRVDQKRFFFDLGSNNRGHFLRISEV AGVDRSSIILPLSSLKQFHEMIGHFVAITKDRRDV-TTGADVRT--LEPA QM-- >4641.GSMUA_AchrUn_randomP18950_001 MEGGAGG-----------------------------GNDVELVSKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVDGIVWFLELFGYYIS- -TDEQDVFSKELKLDSK---------------------------AFYFDF GENKRGRFLKISEASVNRNRSTIIVPAGNSGEEGWTAFRNVLQEIHEEAS RLFMVP---------NQQHMEPPEHLPGLSDDVGAGFISGHSAQS-ASGT ELNADRMVDMHTHDDMGGMGMSKVIRADQKRFFFDLGSNNRGHFLRISEV AGADRSSIILPLSGLKQFHEMIGHFVEITKDRLEG-MVGANVRT--LEPA QR-- >4641.GSMUA_Achr4P02370_001 MERGSG------------------------------GNDVELLCKTLQFE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPVGGIVWFVDLFNYYVN- -TDECDAFSKELKLDTK---------------------------VFYFDV GENRRGRFLKVSEASVSRNRSTIIVPAGSSGEEGWTAFRNILHEINEEAS RLYIVS---N------QQHMEPSEHLPGLSDDVGAGFISGHTSQP-VSGS DLNVDSLVELHPQDEIGSLRMSKVIRADQKRFFFDLGSNNRGHYLRISEV SGSDRSSIILPLSGLKHFHDTIGHFVEITKDRLGG-IPAVNVRT--LEPV QR-- >3711.Bra005613.1-P MEGNSGG-G----------AATV------G--GGGGGSDVELVSKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVN- -SEEHELFSKELQLDSK---------------------------VFYFDI GDNRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEIH-EAS GLFAMP---NQ------KPSDAQEHLVGLSDDVGAGFIPGHGNQPASSSS ELTVERATDLPGQDEAGLTGISKVIRADQKRFFFDLGNNNRGHFLRISEV AGSDRSSIILPLSGLRQFHEVIGHFVEITKDKIDG-MTGANVRT--IDPP HR-- >3702.AT2G32080.1 MEANSGG-GG----GAEGGRAVTG----GG--GGGGGSDVELVSKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVN- -SEEHELFSKELQLDSK---------------------------VFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEIH-EAS GLFVMP---NQ-----VKPSDGQEHL---VDDVGAGFIPGHGSQQ-PSSS EHNVDRTIDSPGQEETGMTGVSKVIRADQKRFFFDLGNNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEVIGHFVEITKDKIEG-MTGANVRT--VDPP QR-- >59689.fgenesh1_pm.C_scaffold_103000004 MEANSGG-------GAEGGRAATG---------GGGGSDVELVSKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVN- -SEEHELFSKELQLDSK---------------------------VFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEIH-EAS GLFVMP---NK-----VKPSDGQEHL---VDDVGAGFIPGHGSQQ-PSSS EHNVDRSVDSPGQEET----VSKVIRADQKRFFFDLGNNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEVIGHFVEITKDKIEG-MTGANVRT--VDPP QR-- >59689.Al_scaffold_0004_1668 MEANSGG-------GAEGGRAATG---------GGGGSDVELVSKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPSSGISWFLDLFNYYVN- -SEEHELFSKELQLDSK---------------------------VFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSSPDEGWAAFRNILAEIH-EAS GLFVMP---NK-----VKPSDGQEHL---VDDVGAGFIPGHGSQQ-PSSS EHNVDRSVDSPGQEET----VSKVIRADQKRFFFDLGNNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEVIGHFVEITKDKIEG-MTGANVRT--VDPP QR-- >3694.POPTR_0001s03790.1 MEGNSGG-------GSGS--GAAA----AG--GGGGGNDVELMCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNHYVDN SADDQDLFSKELQLDTK---------------------------VFYFDI GENRRGRFLKVH---CSPSKIYIIAP------------------------ -------------------------------------------------- ------------------------------------------HIIK---- -------------------------------------------------- ---- >3694.POPTR_0003s20700.1 MEGNSGG-VGGGGSGSGG--GGGG----GG--GGGGGNDVELMCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYVNN SADDQDLFSKELQLDTK---------------------------VFYFDI GENRRGRFLKKS-------------------------------------- -------------------------------------------------- ------------------------------------------TYLG---- -------------------------------------------------- ---- >4081.Solyc01g049690.2.1 MEGNSSG-------------------------GGGGGNDVELLCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFNGISWFLDLFNYYVN- -SDDQDVFSKELQLDTK---------------------------VFYFDV GENRRGRFLKLS-------------------------------------- -------------------------------------------------- ------------------------------------------GLQL---- -----------------WVG------------------------------ ---- >29760.VIT_06s0004g00040.t01 MEGNSG------------------------------GNDVELLCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYVN- -SDEQDVFSKELQLDTKAFLFLLLFLIFRPCFSIHHPMPILCFQVFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSTRDEGWAAFRNILAEIN-EAS RLFILP---NQ------QSSEPSERLVGLSDDVGAGFISGHSTQP-APAS ELNVERSVELPAQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEMVGHFVEITKDRIEG-MTGANVRT--VDPP QR-- >3847.GLYMA07G35160.1 MEGNSGG--------------------------GGGGNDVELLCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYVN- -SDDQDLFSKELQLDTK---------------------------VFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAAFRNVLAEIN-EAS RLFILP---NQ------QNSESSERLVGLSDDVGAGFISGHSTQP-ATSS ELNVDRSVDLPPQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEIVGHFVEITKDRIEG-MTVANVRT--VDPP QR-- >3847.GLYMA20G03020.1 MEGNSGG---------------------GG--GGGGGNDVELLCKTLQVE HKLFYFDLKENPRGRYLKISEKTSATRSTIIVPFSGISWFLDLFNYYVN- -SDDQDLFSKELQLDTK---------------------------VFYFDI GENRRGRFLKVSEASVSRNRSTIIVPAGSSRDEGWAAFRNILAEIN-EAS RLFILP---NQ------QNSESSEHLVGLSDDVGAGFISGHSTQP-ATSS ELNVDRSVDLPPQDEIGNLGVSKVIRADQKRFFFDLGSNNRGHFLRISEV AGSDRSSIILPLSGLKQFHEIVGHFVEITKDRIEG-MAVANVRT--IDPP QR--