Mercurial > repos > pavlo-lutsik > rnbeads
diff tool_dependencies.xml @ 15:602ff524407a draft
Uploaded
author | pavlo-lutsik |
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date | Sun, 21 Apr 2013 18:10:16 -0400 |
parents | a1c96ef6c111 |
children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Sun Apr 21 18:10:16 2013 -0400 @@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<tool_dependency> + <set_environment version="0.9"> + <environment_variable name="R_SCRIPTS_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> + </set_environment> + <package name="R" version="3.0.0"> + <install version="0.9"> + <actions> + <action type="download_by_url">http://CRAN.R-project.org/src/base/R-3/R-3.0.0.tar.gz</action> + <action type="shell_command">./configure --prefix=$INSTALL_DIR --with-x=no</action> + <action type="shell_command">make</action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + <action type="shell_command">R --no-save <<< "install.packages("getopt"); source('http://rnbeads.mpi-inf.mpg.de')"</action> + </actions> + </install> + <readme> + You need a FORTRAN compiler or perhaps f2c in addition to a C compiler to build R. + </readme> + </package> +</tool_dependency> \ No newline at end of file