Mercurial > repos > pdeford > dotplot

changeset 1:9642674cbe9b draft

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Uploaded updated wrapper, fixed output file naming
author pdeford
date Tue, 01 Nov 2016 15:29:30 -0400
parents a8fcdd1c2cce
children 5fb26b015fbe
files dotplot/dotplot.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/dotplot/dotplot.xml	Tue Nov 01 15:19:49 2016 -0400
+++ b/dotplot/dotplot.xml	Tue Nov 01 15:29:30 2016 -0400
@@ -4,9 +4,9 @@
     <requirement type="package">numpy</requirement>
     <requirement type="package">matplotlib</requirement>
   </requirements>
-  <command interpreter="python">dotplot.py $input $filter $outfile1</command>
+  <command interpreter="python">dotplot.py $input $filter $out_file1</command>
   <inputs>
-    <param name="input" type="data" format="tabular" label="LASTZ tabular output" help="Dataset missing? See TIP below"/>
+    <param name="input" type="data" format="tabular" label="LASTZ tabular output"/>
     <param name="filter" type="text" value="0" label="Filter out alignments shorter than (bp)"/>
   </inputs>
   <outputs>