view macros.xml @ 3:ee92746d141a draft default tip

planemo upload for repository https://github.com/ohsu-comp-bio/UNetCoreograph commit 72a33d7c3ad18e717ec61c6b845099d69b9b7abd

<?xml version="1.0"?>
<macros>
    <xml name="requirements">
        <requirements>
            <!--
            <requirement type="package" version="3.6">python</requirement>
            <requirement type="package" version="1.15.1">tensorflow-estimator</requirement>
            <requirement type="package" version="1.15">tensorflow</requirement>
            <requirement type="package">cython</requirement>
            <requirement type="package" version="0.14.2">scikit-image</requirement>
            <requirement type="package">matplotlib</requirement>
            <requirement type="package" version="2020.2.16">tifffile</requirement>
            <requirement type="package" version="1.1.0">scipy</requirement>
            <requirement type="package">opencv</requirement>
            <requirement type="package" version="0.8.1">pytiff</requirement>
            -->
            <container type="docker">labsyspharm/unetcoreograph:@TOOL_VERSION@</container>
        </requirements>
    </xml>

    <xml name="version_cmd">
        <version_command>echo @TOOL_VERSION@</version_command>
    </xml>
    <xml name="citations">
        <citations>
        </citations>
    </xml>

    <token name="@TOOL_VERSION@">2.2.8</token>
    <token name="@VERSION_SUFFIX@">1</token>
    <token name="@CMD_BEGIN@"><![CDATA[
    UNET_PATH="" &&
    if [ -f "/app/UNetCoreograph.py" ]; then
        export UNET_PATH="/app/UNetCoreograph.py";
    else
        export UNET_PATH="${__tool_directory__}/UNetCoreograph.py";
    fi &&
    ]]></token>
</macros>