annotate macros.xml @ 5:3a916c4e9f5f draft

planemo upload for repository https://github.com/goeckslab/tools-mti commit 0762a583dd9d7333f9b039bc06003caaff0f2103

<?xml version="1.0"?>
<macros>
    <xml name="requirements">
        <requirements>
            <!--
            <requirement type="package" version="3.9">python</requirement>
            <requirement type="package" version="0.18.0">scikit-image</requirement>
            <requirement type="package">h5py</requirement>
            <requirement type="package">pandas</requirement>
            <requirement type="package">numpy</requirement>
            <requirement type="package">pathlib</requirement>
            -->
            <container type="docker">labsyspharm/quantification:@TOOL_VERSION@</container>
        </requirements>
    </xml>

    <xml name="version_cmd">
        <version_command>echo @TOOL_VERSION@</version_command>
    </xml>
    <xml name="citations">
        <citations>
        </citations>
    </xml>

    <token name="@TOOL_VERSION@">1.5.3</token>
    <token name="@VERSION_SUFFIX@">1</token>
    <token name="@CMD_BEGIN@"><![CDATA[
    QUANT_PATH='' &&
    if [ -f '/app/CommandSingleCellExtraction.py' ]; then
        export QUANT_PATH='python /app/CommandSingleCellExtraction.py';
    else
        export QUANT_PATH='CommandSingleCellExtraction.py';
    fi &&
    \$QUANT_PATH
    ]]></token>
</macros>