comparison macros.xml @ 6:e11d5fafd0cc draft default tip

planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/quantification commit 4a521310a7989b781380c20e1aab3ac13ca86dff

5:3a916c4e9f5f

<?xml version="1.0"?>
<macros>
    <xml name="requirements">
        <requirements>
            <!--
            <requirement type="package" version="3.9">python</requirement>
            <requirement type="package" version="0.18.0">scikit-image</requirement>
            <requirement type="package">h5py</requirement>
            <requirement type="package">pandas</requirement>
            <requirement type="package">numpy</requirement>
            <requirement type="package">pathlib</requirement>
            -->

    <xml name="version_cmd">
        <version_command>echo @TOOL_VERSION@</version_command>
    </xml>
    <xml name="citations">
        <citations>
        </citations>
    </xml>

    <token name="@TOOL_VERSION@">1.5.3</token>
    <token name="@VERSION_SUFFIX@">1</token>
    <token name="@CMD_BEGIN@"><![CDATA[
    QUANT_PATH='' &&
    if [ -f '/app/CommandSingleCellExtraction.py' ]; then
        export QUANT_PATH='python /app/CommandSingleCellExtraction.py';
    else
        export QUANT_PATH='CommandSingleCellExtraction.py';
    fi &&
    \$QUANT_PATH
    ]]></token>
</macros>

6:e11d5fafd0cc

<?xml version="1.0"?>
<macros>
    <xml name="requirements">
        <requirements>
            <!--
            <requirement type="package" version="3.11">python</requirement>
            <requirement type="package" version="0.23.2">scikit-image</requirement>
            <requirement type="package">h5py</requirement>
            <requirement type="package">pandas</requirement>
            <requirement type="package">numpy</requirement>
            <requirement type="package">pathlib</requirement>
            -->

    <xml name="version_cmd">
        <version_command>echo @TOOL_VERSION@</version_command>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1038/s41592-021-01308-y</citation>
        </citations>
    </xml>

    <token name="@TOOL_VERSION@">1.6.0</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@CMD_BEGIN@">mcquant</token>
</macros>