Mercurial > repos > peterjc > blast_rbh

annotate test-data/rhodopsin_proteins.fasta @ 0:b828ca44a313 draft

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Uploaded v0.1.2 (previously only on the Test Tool Shed)
author peterjc
date Mon, 04 Aug 2014 08:13:39 -0400
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b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
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1 >gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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2 MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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3 PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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4 KPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVV
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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5 HFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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6 SNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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7
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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8 >gi|3024260|sp|P56514.1|OPSD_BUFBU RecName: Full=Rhodopsin
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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9 MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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10 PLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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11 KPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVV
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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12 HFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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13 SEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQ
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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14 VSPA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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15
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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16 >gi|283855846|gb|ADB45242.1| rhodopsin [Cynopterus brachyotis]
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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17 VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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18 VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGE
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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19 NHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIF
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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20 FCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTL
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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21 PAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
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22
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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23 >gi|283855823|gb|ADB45229.1| rhodopsin [Myotis pilosus]
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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24 VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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25 VANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGE
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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26 NHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIF
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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27 FCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTI
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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28 PAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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29
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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30 >gi|223523|prf||0811197A rhodopsin [Bos taurus]
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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31 MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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32 PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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33 KPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVH
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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34 FIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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35 DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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36
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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37 >gi|12583665|dbj|BAB21486.1| fresh water form rod opsin [Conger myriaster]
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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38 MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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39 PLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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40 KPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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41 HFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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42 STFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSS
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
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43 VSPA