Mercurial > repos > peterjc > blast_rbh

annotate test-data/rhodopsin_nucs.fasta @ 1:ff0b814c1320 draft

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Uploaded v0.1.5, NCBI BLAST+ 2.2.30 etc
author peterjc
date Fri, 21 Nov 2014 06:57:14 -0500
parents b828ca44a313
children d8d9a9069586
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
1 >gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
2 ATGAACGGGACGGAGGGCCCGAACTTCTACGTGCCCTTCTCCAACAAAACGGGTGTGGTACGCAGCCCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
3 TCGAGTACCCACAGTACTACCTGGCTGAGCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTCCTGCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
4 CATCGTGCTTGGCTTCCCCATCAACTTCCTCACGCTCTACGTCACGGTCCAGCACAAGAAGCTGCGCACG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
5 CCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCTGACCTCTTCATGGTCTTCGGTGGCTTCACCACCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
6 CCCTCTACACCTCTCTGCATGGATACTTTGTCTTTGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
7 CACACTGGGCGGTGAAATTGCCCTGTGGTCTTTGGTGGTCCTGGCCATTGAGCGGTACGTGGTGGTGTGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
8 AAGCCCATGAGCAACTTCCGCTTTGGGGAGAACCATGCCATAATGGGCGTCGCTTTCACCTGGGTCATGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
9 CACTGGCCTGCGCTGCACCCCCCCTCGTTGGTTGGTCCAGGTACATCCCTGAAGGCATGCAGTGTTCATG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
10 CGGGATCGACTACTACACACTCAAGCCAGAAGTCAACAACGAGTCCTTTGTCATCTACATGTTCGTGGTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
11 CACTTCACCATCCCCATGATCGTCATCTTCTTTTGCTACGGGCAGCTTGTCTTCACAGTCAAGGAGGCGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
12 CAGCCCAGCAGCAGGAGTCAGCCACCACCCAGAAGGCTGAGAAGGAGGTCACTCGCATGGTCATCATCAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
13 GGTCATTGCTTTCCTGATCTGTTGGGTGCCCTACGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
14 TCCAACTTTGGCCCCATCTTCATGACACTCCCGGCGTTCTTCGCAAAGTCCTCCTCCATCTACAACCCTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
15 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
16 ACTGGGTGATGACGAGGCTTCCACAACCGGTTCCAAGACGGAGACCAGCCAGGTGGCACCGGCCTAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
17
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
18 >gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
19 TCTTTCTAGTTTGGGGGGGGGGACTTTAAAGAGCCGCCAATATGAACGGAACAGAAGGCCCAAACTTTTA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
20 CATACCCATGTCCAACAAGACTGGGGTGGTGCGAAGCCCCTTTGAATACCCTCAGTATTACCTGGCAGAG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
21 CCATGGCAATATTCCATTCTGTGCGCGTACATGTTCCTGCTCATTCTACTTGGGTTCCCAATCAACTTCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
22 TGACCTTGTACGTCACCATCCAGCACAAGAAGCTCCGGACACCCTTAAACTATATCCTGCTGAATTTGGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
23 CTTTGCCAACCACTTCATGGTCCTGTGTGGATTCACGGTGACAATGTACTCCTCAATGAACGGATACTTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
24 ATCCTCGGAGCCACCGGTTGCTATGTTGAAGGCTTCTTCGCTACCCTTGGTGGTGAAATCGCCCTTTGGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
25 CCCTGGTGGTCTTGGCCATTGAACGATACGTGGTCGTCTGTAAGCCCATGAGCAACTTCCGATTTAGTGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
26 GAACCATGCCGTCATGGGCGTAGCGTTCACCTGGATAATGGCTTTGTCCTGTGCTGTTCCTCCACTCCTT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
27 GGATGGTCCAGGTACATCCCCGAGGGCATGCAGTGCTCCTGCGGAGTCGACTACTACACCCTGAAGCCCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
28 AGGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTCGTCCACTTCACCATCCCCCTGATTATCATTTT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
29 CTTCTGCTATGGCCGCCTGGTGTGCACTGTGAAAGAGGCTGCAGCTCAACAGCAAGAGTCCGCCACCACC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
30 CAGAAGGCCGAGAAAGAGGTGACCAGGATGGTGATCATCATGGTGGTCTTCTTCCTTATCTGTTGGGTCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
31 CCTACGCCTCTGTCGCTTTCTTCATCTTCAGCAATCAGGGCTCTGAGTTCGGCCCCATCTTCATGACCGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
32 CCCAGCTTTCTTTGCCAAGAGTTCTTCCATCTACAACCCCGTCATCTACATCATGCTCAACAAGCAGTTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
33 CGTAACTGCATGATCACCACCCTGTGCTGCGGCAAGAATCCCTTTGGAGAAGACGATGCCTCCTCTGCCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
34 CCACCTCCAAGACAGAGGCTTCTTCTGTTTCTTCCAGCCAGGTGTCTCCTGCATAAGACCTTCCACCAGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
35 CCTGTCTCAGGGTCCGCTGCCTCACACAGCTCCCACCGCCCCAACTCCGTCTCCTGCTCGCTAAGGCGGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
36 GAAGTTCCCCTTCCATTACATAAAACGTATCTGTTCAAGAAAGGCGACGACGAAGGAGAAGAAGAGGAGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
37 CCCCCCGAACCCCTTCGCTGCTGCTGAAAACGACTTGATTGCTTCTGCAACGCAACGGGGCCTTACGGCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
38 GCGAAGGGGTTGTCATCCGGACGCGCCAAGAATTCCTTCGAGACTGTAAATATCTTAAAGGAACCGTCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
39 GCTAGTTACCGACGCCGCTCCTGTAGCCGCCGTTCCCCCGCACTCCGGCCGGTTCATACCTCTTATTTTT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
40 TTGCAATGCAACAGAAAATAATATTTTTGTTCCCACGGCTTTTCCCGGTCAGGTCTGGTAGTGGCGGAGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
41 TTGGCCGACCCCTCGCACCTGTAATAAAGCGCAG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
42
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
43 >gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
44 GTGCCCTTCTCCAACAAGACAGGCGTGGTGCGCAGTCCCTTCGAGCATCCACAGTACTACCTGGCCGAGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
45 CATGGCAGTTCTCCATGCTGGCCGCCTACATGTTTCTGCTGATCGTGCTCGGCTTCCCCATCAACTTCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
46 CACGCTCTATGTCACGGTTCAGCACAAGAAGCTGCGTACGCCTCTCAACTACATCCTGCTCAACCTGGCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
47 GTGGCCGACCTCTTCATGGTCTTCGGAGGCTTCACCACCACCCTCTACACCTCCCTGCATGGATACTTTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
48 TCTTCGGGCCTACGGGATGCAATCTGGAGGGCTTTTTTGCCACCCTGGGAGGTATGAGCTGAGATGCGGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
49 TAAGGAGGAGGCATAGAGGCATCTGGGAACAGTCCCAAGCTTGGGGTGAAGGCTAAGAGGCCTTCTTCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
50 TGTTCTGTCATTGGCGTCGTCCGAAGCCCTCACTTAATCAACAAACAGTTTGGTGGTGAGGCGCTGAGCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
51 CCATTTGGAGAGGGCAGGTATCGAGCACTGTTTTATCCCCCCTGGAGTGGTGCCATTGCCTTGCTTTACA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
52 GCAAAGAAACTGAGGATGAGAGGAGTCGAGGGTCTTGCCAGGTCACATCATGGCAGAGACAGAGCTGAGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
53 TTCAACCCTGCATCTATGTGCAGTTTCCCTTGGAGCAGCTATGTTAGGTCAGACCCACGGTGGGCACTGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
54 GGAGAGAGCTGCACAAGACAGGTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
55 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGATTGCCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
56 GGAGTGATGTGCAGCGCAAATGTCTGAATTCCATTATTATGTGCTCCTTCTTCCTCTGAGCCAAACATCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
57 ATCTTCATGGCTCCTAGAATTGGGTCCCACCCACATGAGCAGGTCATTTTGTTTCCCTAGAGGGGAGAGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
58 TCACTGCTGTGGAGGGAGGGAAGGTTCGTCCCGCTCCATGTTTCTGTTGTCTCTGCAATGCCTTTCTCTA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
59 GGGACTCTGCCTATTGCCCCAAGAAGGACACATTCTTCTGTAAAAACTCCCTCCTGGGTTCCCAGTCTAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
60 TCAAGACCTCTAAACTGATTTCCATGTCCCTCATGAACCCAAAGCTCTAACTGAATTAAACTTCTCAGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
61 CTTACTCCACTCTCCTCGTCCATCATGCAGCCCCTCTGCCCAGCACCCTATCTCCTCTTCTTCCCAGTGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
62 CTGAGCCCACTGTACCCTGAGACTTCGCTCCAGGCCTGCCCCAGGCTGCCTTCTCAGGTGCCCTCTCCCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
63 CATAGGAGGAGCACGGCCTCCTTAGACAGACGTGGGGTGCAGGTTGGTGGCATGCTGACTGATAGCTGAC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
64 TGCCTTGCAGGTGAAATTGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTATGCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
65 AGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCCTTGCCCTCACCTGGGTCATGGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
66 ACTGGCCTGCGCCGCGCCCCCGCTAGTCGGCTGGTCCAGGTAATGGCACTGAACAGAAGGGAAGTGCCTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
67 TGAGGTCTTCTTAGGGTCCCCCAGCTGGGACTCAAACCTAGGGCTGTCTGGTTCCAGGCACGGAACTGGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
68 GACTCCACTGGGGTTGGGGTTTAGGGCAAGGAAGGAGAGGATCAGACCCTAATGTTGTTACGTGGGTTGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
69 TCCGCATGTCAAGGAGAATCCAAGACACCCAATCCTTCACCTTGGCTGTGCCCCTAATCCTCATCTAAGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
70 CAGGTTCAGATTCCAATCCTCTTTGGCCCAGTGCTCCGTGGGAAGCTCCCTCTGACCTTGGGCCTCAGCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
71 CCTGGGGTTGCTGAGCCTTCCTAGTATAGGTGGTGACATCGTAGCCCCTGGGACCTGGATCCTGCCCAGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
72 CTGCAGGCCATCATCTCCAAATGGGGCTGAGATGAGATGTGAGGAAAGAGGGGAGACAGTGGTTTGGAAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
73 ACTGGACTGGTGGCTTTTTTGGGTTTCCAGAGGACTCATCTTCCTCTGCTTCTAGAATATTCCCACTCTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
74 TCTTCCCTTTCCTCATTCTTCCTGGGTTATTTTTTTTTCCCTTTGCTGAATTCGAGCCCCATTCCCTCCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
75 GCCTCTTTCCCTGTCTTATCTAGCCCAGTCCAGTTATATTCTCATAGGCAGAGGCAACAGATGCTCCAAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
76 TTTTCTGAGGTCGGTTCCAACATCGCCACCCTCTAAAATCAGTGAAACATCCTAACTACATGCCTCATAG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
77 TCCTCCTGTTTCCAAAAACTGCAAAGATCTCCTGGTTACCCTGTATGCCCATCTTTGGGCTAGAAAATCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
78 TCTCACCCTGTTAATAGTAAGACCCTGGTTTGTACAAACTGCCTCAAACACAGAGTTTAGGGGCTTTTCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
79 CTTCTCTCCGCCAACCTCTGACAGGCAGAGTCTGAGGCCTGGCCTCCAGCTGCTGCGGGGAGCAGGTCTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
80 GTAAAGAATCCTGTGCAGGTCAGTGGTATACAGGTCCTGTCAGGTGACAGCCTGGGCGAGAGACTGGAAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
81 GTATCAGGATAACACGGCTGCCAGACGAACAACAAAACAACACTGAATTCACAAGGCGCATTCGAATCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
82 CTCTCAGTCCATTTGATCCTCAGTCACACAGCCGAGTAGACACTTTATCAACTCATTTAACAGAAAGGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
83 AAGTGAAGCCCAGAGCGAGGCCAGCAACGTGGCAGGTCACTCTGGTCATCTAGGGCCTGTTCCCAACTCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
84 TTCACATGTGGGTCTCCAATATGTTCCCTCCTGTCCCAATCTCTGCCGGCCCTCAGGTACATCCCAGAGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
85 GCATGCAGTGCTCATGTGGAATCGACTACTACACCCTCAAGCCGGAGGTCAACAACGAGTCCTTTGTCAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
86 CTACATGTTCGTGGTCCACTTCACCATCCCTATGATTGTCATATTCTTTTGCTATGGACAGCTGGTCTTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
87 ACCGTCAAGGAGGTAAGGTCATGTGTTGGGCACTGGGGACATGCACACTGAGTGAATGGAGCCCAGCTCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
88 ATTCCCAGAGTTGCCACAGTCTGGACACCTGACCTTGTGTCCCTGCAGGCAGCTGCCCAGCAGCAGGAGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
89 CAGCCACCACCCAGAAGGCCGAGAAGGAGGTCACCCGTATGGTCATCATCATGGTCATTGCTTTCCTAAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
90 CTGTTGGCTGCCGTATGCCGGCGTGGCATTCTACATCTTCACCCACCAGGGCTCTAACTTTGGCCCCATC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
91 TTCATGACCCTCCCGGCATTCTTTGCCAAGTCGTCCTCCATCTACAACCCTGTCATCTATATCATGATGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
92 ACAAGCAGGTGCCAGGTGGTAGGGAGGGAGGGTCTGGGTCCCCCAGGCTGCAGGCACTGCCCACAGAGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
93 CAAGCCACATCCTTGACTAGGCAGACCCCAGTCTTCCCATCTGCAAAATTAGGCAGGGGAGTTCGTCTCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
94 CCCAGGCATCAGAGACATCGGGGAGAAATGCACATTTCTGGAGATGAATCAGCATCTCAGGGTGGGCCCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
95 GGAACCTGCACTTCTAAAAACCATTCCACATGACTCTGAGGCTAGCATGAGAAGTGATGATCCACATGGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
96 TCTGGAGGCCTGCTTTAAAAGTCAAGTGGTCAAAGTCCCAAGCCTGGGAACGGGATGGTGCCAGTCTCCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
97 TTAAAGAGATCAAAAGGAGCTAGAAAGTCTTGTGATGAAAGATGAAGGGATAAAGCCGTCCTTTAACACA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
98 GATCAGTGATTTCTCTGCAGAATCCATGACCCAGTGGGAAAAAGTGGTCCCTGGAGTCAGGCATATTGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
99 TTCAAATCCTAGCTCTGCTATTTTCTAGCTATGTAACCTTGGGCAAGTCATCTCCCTTCTCTGTGCTTCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
100 GTTTCTTCTTTCATAGAAAGGGTAAAATCCCAAACTCTTGGGTTAAATGAGATAACTTACATAGCCCTTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
101 ATATGCAGAGGCATTATGGAATGTCGTTAGTGACAAAGTTCCCTTGGGTTTGGTCCCTGGTATCTCTGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
102 GTGAGATTGCATATGTTCCCTTCAGAGGGTCAGATTTGGGATGAGAGTGGAGGCTGCGAGGGCCTGAGTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
103 GGAAGGGATTGGAGGCAAATCTCACCAACCATGTCAGTTTGCTACACACACTTTGGGTGGACCCTGACCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
104 TGACTCATGCTTCTTGCCTTCCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCCAC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
105 TGGGTGACGATGAGGCCTCCACCACTGCCTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
106
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
107 >gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
108 GTGCCCTTCTCCAACAAGACGGGTGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTACCTGGCTGAGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
109 CCTGGCAGTTCTCCATGCTGGCTGCCTACATGTTTCTGCTGATCGTGCTCGGATTCCCCATCAACTTCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
110 CACGCTCTACGTCACCGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
111 GTGGCCAACCTCTTCATGGTCTTTGGAGGCTTCACCACCACCCTGTATACCTCTATGCATGGATACTTCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
112 TCTTCGGGGCCACGGGATGCAATCTGGAGGGCTTCTTTGCCACGCTGGGCGGTGAAATCGCCCTGTGGTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
113 CCTGGTGGTCCTGGCCATCGAGCGGTATGTGGTGGTCTGCAAGCCCATGAGCAACTTCCGCTTTGGGGAG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
114 AACCACGCCATCATGGGCCTCGCCTTCACGTGGGTCATGGCACTGGCCTGCGCTGCACCCCCACTAGCCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
115 GCTGGTCCAGGTACATCCCAGAGGGCATGCAGTGCTCGTGTGGGATTGACTACTACACGCTCAAACCGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
116 GGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCATGATTGTCATTTTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
117 TTCTGCTACGGACAGCTGGTGTTCACAGTGAAGGAGGCGGCTGCCCAGCAGCAGGAGTCAGCCACCACCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
118 AGAAGGCCGAGAAGGAAGTCACGCGCATGGTCATCATCATGGTCGTTGCGTTCCTAATCTGTTGGCTGCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
119 CTACGCCAGCGTGGCATTCTACATCTTTACCCACCAGGGCTCTAACTTTGGCCCTGTCTTCATGACCATC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
120 CCGGCATTCTTCGCCAAGTCATCCTCCATCTACAACCCGGTCATCTATATCATGATGAACAAGCAGTTCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
121 GGAACTGCATGCTCACCACCCTCTGCTGTGGCAAGAACCCACTGGGTGATGACGAAGCATCCACCACTGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
122 CTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
123
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
124 >gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
125 ATGAACGGGACCGAGGGCCCAAACTTCTACGTGCCTTTCTCCAACAAGACGGGCGTCGTACGCAGCCCCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
126 TCGAGGCGCCGCAGTACTACCTGGCTGAGCCATGGCAGTTCAGCATGCTGGCCGCCTACATGTTCCTGCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
127 GATCATGCTTGGCTTCCCCATCAACTTCCTCACGCTGTACGTCACAGTCCAGCACAAGAAGCTGAGGACC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
128 CCCCTCAACTACATCCTGCTCAACCTGGCCGTGGCAGATCTCTTCATGGTGTTCGGGGGCTTCACCACCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
129 CCCTGTATACCTCTCTGCACGGGTACTTCGTGTTCGGTCCGACGGGCTGCAACCTCGAGGGCTTCTTTGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
130 CACCTTAGGCGGTGAAATTGCACTGTGGTCCTTGGTGGTGCTAGCCATCGAGCGGTACGTAGTGGTGTGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
131 AAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCGTCGCATTCACCTGGGTCATGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
132 CTCTGGCCTGTGCGGCCCCCCCCCTCGTCGGCTGGTCTAGATACATCCCGGAGGGGATGCAGTGCTCGTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
133 CGGGATCGATTACTACACGCCCCACGAGGAGACCAACAATGAGTCGTTCGTCATCTACATGTTCGTTGTA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
134 CACTTCATCATCCCCCTGATTGTCATATTCTTCTGCTACGGGCAGCTGGTCTTCACCGTCAAGGAGGCTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
135 CAGCCCAGCAGCAGGAGTCGGCCACCACTCAGAAGGCCGAGAAGGAGGTCACGCGTATGGTCATCATCAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
136 GGTCATCGCTTTCCTCATATGCTGGCTGCCCTACGCAGGTGTGGCGTTCTACATCTTCACCCATCAGGGA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
137 TCCGACTTTGGCCCCATCTTCATGACCATCCCGGCTTTCTTTGCCAAGACGTCTGCCGTCTATAACCCCG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
138 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGGTCACCACTCTCTGCTGTGGCAAGAACCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
139 CCTAGGTGACGACGAGGCCTCCACGACCGTGTCCAAGACAGAGACCAGCCAAGTGGCCCCTGCCTAA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
140
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
141 >gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
142 CCGCTACTGACGAACCGCAACCATGAACGGCACTGAGGGACCTAACTTCTACATCCCCATGTCAAACGCC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
143 ACTGGTGTAGTGAGGAGTCCATTTGAATACCCGCAGTACTACCTTGCAGAACCATGGGCTTTCTCAGCTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
144 TGTCTGCCTACATGTTCTTCCTGATTATCGCCGGATTCCCCATCAACTTCCTCACCCTGTATGTCACCAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
145 CGAACATAAGAAACTGAGGACCCCACTGAACTACATTCTGCTGAACCTGGCCGTGGCCGACCTCTTCATG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
146 GTGTTTGGCGGATTCACCACCACGATGTACACCTCCATGCACGGCTACTTTGTCTTCGGCCCCACCGGCT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
147 GCAACATCGAAGGGTTCTTCGCCACCCTCGGCGGCGAGATTGCCCTCTGGTGCCTCGTTGTCCTGGCCAT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
148 TGAAAGGTGGATGGTCGTCTGCAAGCCAGTGACCAATTTCCGCTTCGGTGAGAGCCATGCCATCATGGGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
149 GTCATGGTGACCTGGACCATGGCATTGGCCTGTGCCCTCCCCCCTCTCTTCGGCTGGTCTCGGTACATTC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
150 CGGAAGGTCTGCAGTGCTCGTGCGGGATCGACTACTATACCCGGGCGCCTGGGATCAACAATGAGTCCTT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
151 TGTGATCTACATGTTTACCTGCCACTTCTCCATCCCACTCGCCGTCATCTCTTTCTGCTACGGCCGACTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
152 GTGTGCACCGTCAAAGAGGCCGCTGCCCAGCAACAGGAGTCCGAGACCACCCAGAGGGCTGAGCGGGAGG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
153 TCACCCGCATGGTCGTCATCATGGTCATCTCCTTCCTGGTCTGCTGGGTGCCCTATGCCAGTGTGGCCTG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
154 GTACATCTTTACCCACCAGGGAAGCACTTTTGGGCCCATCTTCATGACCATTCCATCCTTCTTTGCCAAG
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
155 AGTTCAGCCCTCTACAACCCCATGATCTACATCTGCATGAACAAGCAGTTCCGCCATTGCATGATCACCA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
156 CCCTCTGCTGTGGGAAGAACCCCTTCGAGGAGGAGGATGGAGCGTCCGCCACTAGCTCTAAAACTGAGGC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
157 TTCATCCGTGTCCTCCAGCTCTGTCTCCCCGGCATAAACCTTGTTTGACCGAACACCACGCATCAACACA
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
158 AAGACCAAGAATGCTGACTAAATGCTAACATTTCAGGGAAATCCAAAGACTTTTTACTATTTTTTTACAC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
159 AACCATATAGGTTGCAAACAGAGGTTTAGCCCTGTTTACAGGTTGTCATCAATGTGATGTCAGTATGTAC
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
160 AATATAGTCAACTTGATAGCAAGTTGTTGGCTTATTTCAGATTGTATGGGCAATGTAATCAACCATATGT
b828ca44a313 Uploaded v0.1.2 (previously only on the Test Tool Shed)
peterjc
parents:
diff changeset
161 GAAATAAATTGCAA