# HG changeset patch
# User peterjc
# Date 1360321533 18000
# Node ID 60c2d6ce926d99dfbeeeb870005cc5498d6ba4b6
# Parent  44ecdccbe19d360465814a1105d9d264638a1be4
Uploaded v0.0.2b, with repository_dependencies.xml this time.

diff -r 44ecdccbe19d -r 60c2d6ce926d tools/ncbi_blast_plus/blastxml_to_top_descr.txt
--- a/tools/ncbi_blast_plus/blastxml_to_top_descr.txt	Fri Feb 08 06:02:35 2013 -0500
+++ b/tools/ncbi_blast_plus/blastxml_to_top_descr.txt	Fri Feb 08 06:05:33 2013 -0500
@@ -61,7 +61,7 @@
 For making the "Galaxy Tool Shed" http://community.g2.bx.psu.edu/ tarball use
 the following command from the Galaxy root folder:
 
-$ tar -czf blastxml_to_top_descr.tar.gz tools/ncbi_blast_plus/blastxml_to_top_descr.* tools/ncbi_blast_plus/tool_dependencies.xml
+$ tar -czf blastxml_to_top_descr.tar.gz tools/ncbi_blast_plus/blastxml_to_top_descr.* tools/ncbi_blast_plus/repository_dependencies.xml
 
 Check this worked:
 
@@ -69,7 +69,7 @@
 tools/ncbi_blast_plus/blastxml_to_top_descr.py
 tools/ncbi_blast_plus/blastxml_to_top_descr.txt
 tools/ncbi_blast_plus/blastxml_to_top_descr.xml
-tools/ncbi_blast_plus/tool_dependencies.xml
+tools/ncbi_blast_plus/repository_dependencies.xml
 
 
 Licence (MIT/BSD style)
diff -r 44ecdccbe19d -r 60c2d6ce926d tools/ncbi_blast_plus/repository_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/ncbi_blast_plus/repository_dependencies.xml	Fri Feb 08 06:05:33 2013 -0500
@@ -0,0 +1,5 @@
+<?xml version="1.0"?>
+<repositories description="This requires the BLAST datatype definitions (e.g. the BLAST XML format).">
+<!-- Revision 4:f9a7783ed7b6 on the main tool shed is v0.0.14 which added BLAST databases -->
+<repository toolshed="http://toolshed.g2.bx.psu.edu" name="blast_datatypes" owner="devteam" changeset_revision="f9a7783ed7b6" />
+</repositories>
diff -r 44ecdccbe19d -r 60c2d6ce926d tools/ncbi_blast_plus/tool_dependencies.xml
--- a/tools/ncbi_blast_plus/tool_dependencies.xml	Fri Feb 08 06:02:35 2013 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,21 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="blast+" version="2.2.26+">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.26/ncbi-blast-2.2.26+-src.tar.gz</action>
-                <action type="shell_command">cd c++ &amp;&amp; ./configure --prefix=$INSTALL_DIR &amp;&amp; make &amp;&amp; make install</action>
-                <action type="set_environment">
-                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>
-These links provide information for building the NCBI Blast+ package in most environments.
-
-System requirements
-http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&amp;PAGE_TYPE=BlastDocs&amp;DOC_TYPE=Download
-        </readme>
-    </package>
-</tool_dependency>
-