Mercurial > repos > peterjc > effectivet3
view tool-data/effectiveT3.loc.sample @ 2:5a8e09f115f8 draft
Uploaded v0.0.10, adds unit tests.
Includes v0.0.9 which checked error codes.
author | peterjc |
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date | Wed, 17 Apr 2013 05:26:26 -0400 |
parents | e607c342312f |
children | 5f85301d50bf |
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# This is a three column tab separated file to define the modules (models) # for the Effective T3 prediction tool. # # Column 1 - Module ID, string that Galaxy will save in its database # Column 2 - Human readable name, Galaxy will show this in the UI # Column 3 - Filename, Galaxy will use this when calling the tool # #NOTE: In EffectiveT3 v1.0.1, the modules are given as their filename #(with the JAR extension) but without any path. They are expected to #be located in a subdirectory called module under the working directory. #For the galaxy wrapper, we assume this means under the folder where the #main JAR file is, TTSS_GUI-1.0.1.jar # #e.g. # # /opt/EffectiveT3/TTSS_GUI-1.0.1.jar # /opt/EffectiveT3/module/TTSS_STD-1.0.1.jar # /opt/EffectiveT3/module/TTSS_ANIMAL-1.0.1.jar # /opt/EffectiveT3/module/TTSS_PLANT-1.0.1.jar # #See files ../tools/protein_analysis/effectiveT3.* for more details, #and http://effectors.org # standard Type III Effector prediction with standard set TTSS_STD-1.0.1.jar animal Type III Effector prediction with animal set TTSS_ANIMAL-1.0.1.jar plant Type III Effector prediction with plant set TTSS_PLANT-1.0.1.jar