comparison tools/fastq/fastq_paired_unpaired.py @ 3:528ba9c896e0 draft

Uploaded v0.0.8, MIT licence and reST for README, citation information, development moved to GitHub

2:95a632a71951

suffices. See below or run the tool with no arguments for more details.

Note that the FASTQ variant is unimportant (Sanger, Solexa, Illumina, or even
Color Space should all work equally well).

This script is copyright 2010-2011 by Peter Cock, The James Hutton Institute
(formerly SCRI), Scotland, UK. All rights reserved.

See accompanying text file for licence details (MIT/BSD style).
"""
import os
import sys
import re
from galaxy_utils.sequence.fastq import fastqReader, fastqWriter

if "-v" in sys.argv or "--version" in sys.argv:
    print "Version 0.0.6"
    sys.exit(0)

def stop_err(msg, err=1):
   sys.stderr.write(msg.rstrip() + "\n")
   sys.exit(err)

3:528ba9c896e0

suffices. See below or run the tool with no arguments for more details.

Note that the FASTQ variant is unimportant (Sanger, Solexa, Illumina, or even
Color Space should all work equally well).

This script is copyright 2010-2013 by Peter Cock, The James Hutton Institute
(formerly SCRI), Scotland, UK. All rights reserved.

See accompanying text file for licence details (MIT license).
"""
import os
import sys
import re
from galaxy_utils.sequence.fastq import fastqReader, fastqWriter

if "-v" in sys.argv or "--version" in sys.argv:
    print "Version 0.0.8"
    sys.exit(0)

def stop_err(msg, err=1):
   sys.stderr.write(msg.rstrip() + "\n")
   sys.exit(err)