Mercurial > repos > peterjc > get_orfs_or_cdss

annotate test-data/get_orf_input.fasta @ 10:01b0488d9cfb draft

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v0.2.2 Internal changes to command line handling
author peterjc
date Tue, 16 May 2017 09:11:27 -0400
parents 922d69bd5258
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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1 >alpha three forward CDS using table 1
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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3 NNNNNNNNNNNNNNNNATGNATGNATGNNNNNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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5 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
7 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
8 NNNNNNNNNNNNNNNNNTAANNTAGMNTGANNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
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9 >beta three forward CDS using table 11
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
10 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
11 NNNNNNNNNNNNNNNNNGTGNATANATTNNNNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
12 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
13 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
15 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
16 NNNNNNNNNNNNNNNNNNTAANNTAGNNTGANNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT