Mercurial > repos > peterjc > get_orfs_or_cdss

annotate test-data/get_orf_input.fasta @ 7:705a2e2df7fb draft

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v0.1.1 fix typo; v0.1.0 BED output (Eric Rasche), NCBI genetic code 24; v0.0.7 embeds citation
author peterjc
date Thu, 30 Jul 2015 12:35:31 -0400
parents 922d69bd5258
children
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922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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1 >alpha three forward CDS using table 1
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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3 NNNNNNNNNNNNNNNNATGNATGNATGNNNNNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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5 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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7 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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8 NNNNNNNNNNNNNNNNNTAANNTAGMNTGANNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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9 >beta three forward CDS using table 11
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
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10 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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11 NNNNNNNNNNNNNNNNNGTGNATANATTNNNNNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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12 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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13 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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14 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff changeset
15 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
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16 NNNNNNNNNNNNNNNNNNTAANNTAGNNTGANNNNNNNNNNNNNNNNNNNN
922d69bd5258 Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
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17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT