Mercurial > repos > peterjc > get_orfs_or_cdss
annotate test-data/get_orf_input.t1_nuc_out.fasta @ 7:705a2e2df7fb draft
v0.1.1 fix typo; v0.1.0 BED output (Eric Rasche), NCBI genetic code 24; v0.0.7 embeds citation
author | peterjc |
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date | Thu, 30 Jul 2015 12:35:31 -0400 |
parents | 922d69bd5258 |
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rev | line source |
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1
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
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1 >alpha|CDS1 length 87 aa, 264 bp, from 68..331 of alpha three forward CDS using table 1 |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
2 ATGNATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAA |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
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3 AAAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
4 CCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
5 GGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTN |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
6 NNNNNNNNNNNNNNNNTAANNTAG |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
7 >alpha|CDS2 length 84 aa, 255 bp, from 72..326 of alpha three forward CDS using table 1 |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
8 ATGNATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
9 AAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
10 CCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
11 GGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNN |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
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12 NNNNNNNNNNNNTAA |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
13 >alpha|CDS3 length 86 aa, 261 bp, from 76..336 of alpha three forward CDS using table 1 |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
14 ATGNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
15 AAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
16 CCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
|
17 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNN |
922d69bd5258
Uploaded v0.0.2, fixes labelling issue on reverse strand.
peterjc
parents:
diff
changeset
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18 NNNNNNNNTAANNTAGMNTGA |