Mercurial > repos > peterjc > get_orfs_or_cdss

comparison test-data/get_orf_input.t11_open_prot_out.fasta @ 1:922d69bd5258 draft

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Uploaded v0.0.2, fixes labelling issue on reverse strand.
author peterjc
date Tue, 29 Jan 2013 10:19:01 -0500
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0:9cff9a1176ea 1:922d69bd5258
1 >alpha|CDS1 length 87 aa, 264 bp, from 68..331 of alpha three forward CDS using table 1
2 MXXXXXXXXXXXKKKKKKKKKKKKKKKKNPPPPPPPPPPPPPPPPPGGGGGGGGGGGGGG
3 GGGFFFFFFFFFFFFFFFFXXXXXXXX
4 >alpha|CDS2 length 84 aa, 255 bp, from 72..326 of alpha three forward CDS using table 1
5 MXXXXXXXXXXKKKKKKKKKKKKKKKKTPPPPPPPPPPPPPPPPRGGGGGGGGGGGGGGG
6 GVFFFFFFFFFFFFFFFFXXXXXX
7 >alpha|CDS3 length 86 aa, 261 bp, from 76..336 of alpha three forward CDS using table 1
8 MXXXXXXXXKKKKKKKKKKKKKKKKKPPPPPPPPPPPPPPPPPGGGGGGGGGGGGGGGGG
9 FFFFFFFFFFFFFFFFFXXXXXXXXX
10 >beta|CDS1 length 87 aa, 264 bp, from 69..332 of beta three forward CDS using table 11
11 MXXXXXXXXXXXKKKKKKKKKKKKKKKKTPPPPPPPPPPPPPPPPRGGGGGGGGGGGGGG
12 GGVFFFFFFFFFFFFFFFFXXXXXXXX
13 >beta|CDS2 length 84 aa, 255 bp, from 73..327 of beta three forward CDS using table 11
14 MXXXXXXXXXKKKKKKKKKKKKKKKKKPPPPPPPPPPPPPPPPPGGGGGGGGGGGGGGGG
15 GFFFFFFFFFFFFFFFFFXXXXXX
16 >beta|CDS3 length 86 aa, 261 bp, from 77..337 of beta three forward CDS using table 11
17 MXXXXXXXXKKKKKKKKKKKKKKKKNPPPPPPPPPPPPPPPPPGGGGGGGGGGGGGGGGG
18 FFFFFFFFFFFFFFFFXXXXXXXXXX
19 >beta|CDS4 length 25 aa, 75 bp, from 334..408 of beta three forward CDS using table 11
20 MXXXXXXXFFFFFFFFFFFFFFFFF