# HG changeset patch # User peterjc # Date 1718589752 0 # Node ID 0c71cd1cd99a50e0d1a8d2f01cfaf3c270c3c2cc # Parent 84e483325b0422012b9311f07571014d7dd1815a planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/make_nr commit 68ce19547b0ea0592cbaeb506dda165a725f5fe6 diff -r 84e483325b04 -r 0c71cd1cd99a tools/make_nr/README.rst --- a/tools/make_nr/README.rst Thu Mar 18 12:48:57 2021 +0000 +++ b/tools/make_nr/README.rst Mon Jun 17 02:02:32 2024 +0000 @@ -83,6 +83,7 @@ ======= ====================================================================== Version Changes ------- ---------------------------------------------------------------------- +v0.0.3 - Updated to latest Biopython on BioContainers (Biopython 1.73) v0.0.2 - Fixed bug writing files when there were no duplicates v0.0.1 - Added option to sort merged IDs, and support for gzipped files v0.0.0 - Initial version (not published to main Galaxy Tool Shed) diff -r 84e483325b04 -r 0c71cd1cd99a tools/make_nr/make_nr.py --- a/tools/make_nr/make_nr.py Thu Mar 18 12:48:57 2021 +0000 +++ b/tools/make_nr/make_nr.py Mon Jun 17 02:02:32 2024 +0000 @@ -14,12 +14,11 @@ import os import shutil import sys - from optparse import OptionParser if "-v" in sys.argv or "--version" in sys.argv: - print("v0.0.2") + print("v0.0.3") sys.exit(0) diff -r 84e483325b04 -r 0c71cd1cd99a tools/make_nr/make_nr.xml --- a/tools/make_nr/make_nr.xml Thu Mar 18 12:48:57 2021 +0000 +++ b/tools/make_nr/make_nr.xml Mon Jun 17 02:02:32 2024 +0000 @@ -1,7 +1,7 @@ - + by combining duplicated sequences - biopython + biopython python $__tool_directory__/make_nr.py --version