Mercurial > repos > peterjc > mira4_assembler

annotate test-data/ecoli.mira4_de_novo.fasta @ 1:70248e6e3efc draft

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v0.0.7 move dependency to package_mira_4_0_2 etc
author peterjc
date Wed, 05 Aug 2015 11:31:05 -0400
parents 6a88b42ce6b9
children
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1 >MIRA_c1
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2 gccagggctattttaccggcgcagtatcgccgccaggattgcattgcgcacgggcgacat
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3 ctggcaggcttcattcacgcctgctattcccgtcagcctgagcttgccgcgaagctgatg
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4 aaagatgttatcgctgaaccctaccgtgaacggttactgccaggcttccggcaggcgcgg
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5 caggcggtcgcggaaatcggcgcggtagcgagcggtatctccggctccggcccgaccttg
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6 ttcgctctgtgtgacaagccggaaaccgcccagcgcgttgccgactggttgggtaagaac
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7 tacctgcaaaatcaggaaggttttgttcatatttgccggctggatacggcgggcgcacga
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8 gtactggaaaactaaatgaaactctacaatctgaaagatcacaacgagcaggtcagcttt
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9 gcgcaagccgtaacccaggggttgggcaaaaatcaggggctgttttttccgcacgacctg
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10 ccggaattcagcctgactgaaattgatgagatgctgaagctggattttgtcacccgcagt
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11 gcgaagatcctctcggcgtttattggtgatgaaatcccacaggaaatcctggaagagcgc
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12 gtgcgcgcggcgtttgccttcccggctccggtcgccaatgttgaaagcgatgtcggttgt
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13 ctggaattgttccacgggccaacgctggcatttaaagatttcggcggtcgctttatggca
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14 caaatgctgacccatattgcgggtgataagccagtgaccattctgaccgcgacctccggt
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15 gataccggagcggcagtggctcatgctttctacggtttaccgaatgtgaaagtggttatc
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16 ctctatccacgaggcaaaatcagtccactgcaagaaaaactgttctgtacattgggcggc
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17 aatatcgaaactgttgccatcgacggcgatttcgatgcctgtcaggcgctggtgaagcag
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18 gcgtttgatgatgaagaactgaaagtggcgctagggttaaactcggctaactcgattaac
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19 atcagccgtttgctggcgcagatttgctactactttgaagctgttgcgcagctgccgcag
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20 gagacgcgcaaccagctggttgtctcggtgccaagcggaaacttcggcgatttgacggcg
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21 ggtctgctggcgaagtcactcggtctgccggtgaaacgttttattgctgcgaccaacgtg
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22 aacgataccgtgccacgtttcctgcacgacggtcagtggtcacccaaagcgactcaggcg
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23 acgttatccaacgcgatggacgtgagtcagccgaacaactggccgcgtgtggaagagttg
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24 ttccgccgcaaaatctggcaactgaaagagctgggttatgcagccgtggatgatgaaacc
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25 acgcaacagacaatgcgtgagttaaaagaactgggctacacttcggagccgcacgctgcc
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26 gtagcttatcgtgcgctgcgtgatcagttgaatccaggcgaatatggcttgttcctcggc
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27 accgcgcatccggcgaaatttaaagagagcgtggaagcgattctcggtgaaacgttggat
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28 ctgccaaaagagctggcagaacgtgctgatttacccttgctttcacataatctgcccgcc
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29 gattttgctgcgttgcgtaaattgatgatgaatcatcagtaaaatctattcattatctca
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30 atagcttttcattctgactgcaacgggcaatatgtctctgtgtggattaaaaaaagagtg
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31 tctgatagcagcttctgaactggttacctgccgtgagtaaattaaaattttattgactta
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32 ggtcactaaatactttaaccaatataggcatagcgcacagacagataaaaattacagagt
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33 acacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaa
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34 cggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggct
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35 ttttttttcgaccaaaggtaacgaggtaacaaccatgcgagagttgaagttcggcggtac
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36 atcagtggcaaatgcagaacgttttctgcgtgttgccgatattctggaaagcaatgccag
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37 gcaggggcaggtggccaccgtcctctctgcccccgccaaaacaccaaccacctggtggcg
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38 atgattgaaaaaaccattagcggccaggatgctttacccaatatcagcgatgccgaacgt
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39 atttttgccgaacttttgacgggactcgccgccgcccagccggggttcccgctggcgacg
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40 tcaattgaaaactttcgtcgatcaggaatttgcccaaataaaacatgtcctgcatggcat
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41 tagtttgttggggcagtgcccggatagcatcaacgctgcgctgatttgccgtggcgagaa
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42 aatgtcgatcgccgttatggccggcgtattagaagcgcgcggtcacaacgttactgttat
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43 cgatccggtcgaaaaactgctggcagtggggcattacctcgaatctaccgtcgatattgc
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44 tgagtccacccgccgtattgcggcaagccgcattccggctgatcacatggtgctgatggc
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45 aggtttcaccgccggtaatgaaaaaggcgaactggtggtgcttggacgcaacggttccga
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46 ctactctgctgcggtgctggctgcctgtttacgcgccgattgttgcgagatttggacgga
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47 cgttgacggggtctatacctgcgacccgcgtcaggtgcccgatgcgaggttgttgaagtc
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48 gatgtcctaccaggaagcgatggagctttcctacttcggcgctaaagttcttcacccccg
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49 caccattacccccatcgcccagttccagatcccttgcctgattaaaaataccggaaatcc
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50 tcaagcaccaggtacgctcattggtgccagccgtgatgaagacgaattaccggtcaaggg
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51 catttccaatctgaataacatggcaatgttcagcgtttctggtccggggatgaaagggat
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52 ggtcggcatggcggcgcgcgtctttgcagcgatgtcacgcgcccgtatttccgtggtgct
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53 gattacgcaatcatcttccgaatacagcatcagtttctgcgttccacaaagcgactgtgt
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54 gcgagctgaacgggcaatgcaggaagagttctacctggaactgaaagaaggcttactgga
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55 gccgctggcagtgacggaacggctggccattatctcggtggtaggtgatggtatgcgcac
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56 cttgcgtgggatctcggcgaaattctttgccgcactggcccgcgccaatatcaacattgt
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57 cgccattgctcagggatcttctgaacgctcaatctctgtcgtggtaaataacgatgatgc
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58 gaccactggcgtgcgcgttactcatcagatgctgttcaataccgatcaggttatcgaagt
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59 gtttgtgattggcgtcggtggcgttggcggtgcgctgctggagcaactgaagcgtcagca
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60 aagctggctgaagaataaacatatcgacttacgtgtctgcggtgttgccaactcgaaggc
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61 tctgctcaccaatgtacatggccttaatctggaaaactggcaggaagaactggcgcaagc
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62 caaagagccgtttaatctcgggcgcttaattcgcctcgtgaaagaatatcatctgctgaa
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63 cccggtcattgttgactgcacttccagccaggcagtggcggatcaatatgccgacttcct
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64 gcgcgaaggtttccacgttgtcacgccgaacaaaaaggccaacacctcgtcgatggatta
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65 ctaccatcagttgcgttatgcggcggaaaaatcgcggcgtaaattcctctatgacaccaa
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66 cgttggggctggattaccggttattgagaacctgcaaaatctgctcaatgcaggtgatga
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67 attgatgaagttctccggcattctttctggttcgctttcttatatcttcggcaagttaga
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68 cgaaggcatgagtttctccgaggcgaccacgctggcgcgggaaatgggttataccgaacc
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69 ggacccgcgagatgatctttctggtatggatgtggcgcgtaaactattgattctcgctcg
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70 tgaaacgggacgtgaactggagctggcggatattgaaattgaacctgtgctgcccgcaga
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71 gtttaacgccgagggtgatgttgccgcttttatggcgaatctgtcacaactcgacgatct
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72 ctttgccgcgcgcgtggcgaaggcccgtgatgaaggaaaagttttgcgctatgttggcaa
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73 tattgatgaagatggcgtctgccgcgtgaagattgccgaagtggatggtaatgatccgct
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74 gttcaaagtgaaaaatggcgaaaacgccctggccttctatagccactattatcagccgct
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75 gccgttggtactgcgcggatatggtgcgggcaatgacgttacagctgccggtgtctttgc
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76 tgatctgctacgtaccctctcatggaagttaggagtctgacatggttaaagtttatgccc
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77 cggcttccagtgccaatatgagcgtcgggtttgatgtgctcggggcggcggtgacacctg
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78 ttgatggtgcattgctcggagatgtagtcacggttgaggcggcagagacattcagtctca
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79 acaacctcggacgctttgccgataagctgccgtcagaaccacgggaaaatatcgtttatc
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80 agtgctgggagcgtttttgccaggaactgggtaagcaaattccagtggcgatgaccctgg
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81 aaaagaatatgccgatcggttcgggcttaggctccagtgcctgttcggtggtcgcggcgc
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82 tgatggcgatgaatgaacactgcggcaagccgcttaatgacactcgtttgctggctttga
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83 tgggcgagctggaaggccgtatctccggcagcattcattacgacaacgtggcaccgtgtt
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84 ttctcggtggtatgcagttgatgatcgaagaaaacgacatcatcagccagcaagtgccag
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85 ggtttgatgagtggctgtgggtgctggcgtatccggggattaaagtctcgacggcagaag
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86 ccagggctattttaccggcgcagtatcgccgcca