diff tools/mummer/mummer.xml @ 1:b07aa90c95e6 draft

Uploaded v0.0.2, corrects typo on tool ID, adds citation markup.
author peterjc
date Tue, 28 Oct 2014 06:57:35 -0400
parents b0551f2a5986
children 8f93c1b7609e
line wrap: on
line diff
--- a/tools/mummer/mummer.xml	Mon Oct 27 12:56:55 2014 -0400
+++ b/tools/mummer/mummer.xml	Tue Oct 28 06:57:35 2014 -0400
@@ -1,5 +1,5 @@
-<tool id="mumer_wrapper" name="MUMmer" version="0.0.1">
-    <description>Draw dotplot with mummer/nucmer/promer/mummerplot</description>
+<tool id="mummerplot_wrapper" name="MUMmer dotplot" version="0.0.2">
+    <description>Combine mummer/nucmer/promer with mummerplot</description>
     <requirements>
             <requirement type="binary">ps2pdf</requirement>
             <requirement type="binary">nucmer</requirement>
@@ -43,8 +43,8 @@
     <help>
 **What it does**
 
-Takes two FASTA files (*species A* and *species B*), compairs them using one
-of the MUMmer 3 tools (``mummer``, ``nucmer``, or ``promer``), comparing both
+Takes two FASTA files (*species A* and *species B*), compares them using one
+of the MUMmer 3 tools (``mummer``, ``nucmer``, or ``promer``), checking both
 strands, and then draws a dotplot using ``mummerplot``.
 
 The full MUMmer suite is more flexible and capable than this limited wrapper.
@@ -65,4 +65,7 @@
 This wrapper is available to install into other Galaxy Instances via the Galaxy
 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/mummer
     </help>
+    <citations>
+        <citation type="doi">10.1186/gb-2004-5-2-r12</citation>
+    </citations>
 </tool>